Clc04G10730 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G10730
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	ClcChr04: 24266137 .. 24266800 (+)
RNA-Seq Expression	Clc04G10730
Synteny	Clc04G10730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAATACACAATTAAATAAGGCCTAAAAAGCAAACCCCACTTGAATTCTTGGCCTTATAAATAATCCCCTCTTACACTCCCCAATTCCCCTGCACTCCCAACTCTGTTCCTAAGATTCTCCCTGTTTTTCTCCCTAAACCACTTTTCAGGTGAATTTATTTCCAATTTCCTCTTATTCGCATGTCAAGATTCAAATTTACCATTTTAACAAAAACCCCATTTTGATTTTGTGCAGATATAATAATAAGAGAAAGATGAATCGAAGAAACAGTGGAGCAGCAACGCCAAAGCTTGACCTGAAACTGAATTTATCGCCACCGAGAGCGAACAGAGGAGTGGAATCGCCGAGCCGGTCTGCCACGGTGTCGCCGACGTCGCCGCCGACCTCGTGTGTGTCGTCGGAGGAAGAGATGGCGGCGGCGGTGAGATACTCAAACAGCCCTGAAGCAACGTCGATGATGCTGGTGGGTTGCCCACGTTGTCTGATGTATGTTATGTTGTCGGAAGAAGATCCCAAATGTCCCAAATGCAAAAGCACTGTTCTTCTCGATGTTCTTCATGATAACGCCGCCGTCAAAACCACGAAAAACTAGGGAACAAAAAAAAAACAGAGACAATGAAGAACAAATTCTATAAGTCTAGAGAGAGAGATTTTTTTTTTT

mRNA sequence

AACAAATACACAATTAAATAAGGCCTAAAAAGCAAACCCCACTTGAATTCTTGGCCTTATAAATAATCCCCTCTTACACTCCCCAATTCCCCTGCACTCCCAACTCTGTTCCTAAGATTCTCCCTGTTTTTCTCCCTAAACCACTTTTCAGATATAATAATAAGAGAAAGATGAATCGAAGAAACAGTGGAGCAGCAACGCCAAAGCTTGACCTGAAACTGAATTTATCGCCACCGAGAGCGAACAGAGGAGTGGAATCGCCGAGCCGGTCTGCCACGGTGTCGCCGACGTCGCCGCCGACCTCGTGTGTGTCGTCGGAGGAAGAGATGGCGGCGGCGGTGAGATACTCAAACAGCCCTGAAGCAACGTCGATGATGCTGGTGGGTTGCCCACGTTGTCTGATGTATGTTATGTTGTCGGAAGAAGATCCCAAATGTCCCAAATGCAAAAGCACTGTTCTTCTCGATGTTCTTCATGATAACGCCGCCGTCAAAACCACGAAAAACTAGGGAACAAAAAAAAAACAGAGACAATGAAGAACAAATTCTATAAGTCTAGAGAGAGAGATTTTTTTTTTT

Coding sequence (CDS)

ATGAATCGAAGAAACAGTGGAGCAGCAACGCCAAAGCTTGACCTGAAACTGAATTTATCGCCACCGAGAGCGAACAGAGGAGTGGAATCGCCGAGCCGGTCTGCCACGGTGTCGCCGACGTCGCCGCCGACCTCGTGTGTGTCGTCGGAGGAAGAGATGGCGGCGGCGGTGAGATACTCAAACAGCCCTGAAGCAACGTCGATGATGCTGGTGGGTTGCCCACGTTGTCTGATGTATGTTATGTTGTCGGAAGAAGATCCCAAATGTCCCAAATGCAAAAGCACTGTTCTTCTCGATGTTCTTCATGATAACGCCGCCGTCAAAACCACGAAAAACTAG

Protein sequence

MNRRNSGAATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAAAVRYSNSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTTKN

Homology

[Close]

BLAST of Clc04G10730 vs. NCBI nr
Match: XP_004143338.1 (uncharacterized protein LOC101217127 [Cucumis sativus] >KAA0025228.1 uncharacterized protein E6C27_scaffold541G00770 [Cucumis melo var. makuwa] >KGN48289.1 hypothetical protein Csa_003966 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 2.2e-46
Identity = 104/115 (90.43%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MNRRNS---GAATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAAAV 60
           MNRRNS   GAATPKL+LKLNLSPPRANRGVESPSRSATVSPTSPP+SCVSSEEEM    
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM---- 60

Query: 61  RYSNSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTTKN 113
           RYSNSPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKT KN
Sbjct: 61  RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 111

[Close]

BLAST of Clc04G10730 vs. NCBI nr
Match: XP_008462606.1 (PREDICTED: uncharacterized protein LOC103500924, partial [Cucumis melo])

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-45
Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 1   MNRRNS---GAATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAAAV 60
           MNRRNS   GAATPKL+LKLNLSPPRANRGVESPSRSATVSPTSPP+SCVSSEEEM    
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM---- 60

Query: 61  RYSNSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTTK 112
           RYSNSPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKT K
Sbjct: 61  RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTEK 110

[Close]

BLAST of Clc04G10730 vs. NCBI nr
Match: XP_022925998.1 (uncharacterized protein LOC111433248 [Cucurbita moschata] >KAG6604328.1 Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034480.1 hypothetical protein SDJN02_04209, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192.6 bits (488), Expect = 1.8e-45
Identity = 102/118 (86.44%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MNRRNSG-----AATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAA 60
           MNRRNSG     AA PKL+LKLNLSPPRANRGVESPSRSATVSPTSPP+SCVSSEEEM  
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60

Query: 61  A-VRYSNSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTTKN 113
             VRYS+SPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVKT +N
Sbjct: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 118

[Close]

BLAST of Clc04G10730 vs. NCBI nr
Match: XP_023543892.1 (uncharacterized protein LOC111803624 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.2 bits (487), Expect = 2.4e-45
Identity = 102/119 (85.71%), Postives = 107/119 (89.92%), Query Frame = 0


Query: 1   MNRRNSG------AATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMA 60
           MNRRNSG      AA PKL+LKLNLSPPRANRGVESPSRSATVSPTSPP+SCVSSEEEM 
Sbjct: 1   MNRRNSGGRGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMT 60

Query: 61  AA-VRYSNSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTTKN 113
              VRYS+SPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVKT +N
Sbjct: 61  VGRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 119

[Close]

BLAST of Clc04G10730 vs. NCBI nr
Match: XP_022979077.1 (uncharacterized protein LOC111478822 [Cucurbita maxima])

HSP 1 Score: 190.7 bits (483), Expect = 7.0e-45
Identity = 101/118 (85.59%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MNRRNSG-----AATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAA 60
           MNRRNSG     AA PKL+LKLNLSPPRANRGVESPSRSATVSPTSPP+SCVSSEEEM  
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60

Query: 61  A-VRYSNSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTTKN 113
             VRYS+SPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVK  +N
Sbjct: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKNRRN 118

[Close]

BLAST of Clc04G10730 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.9e-33
Identity = 75/99 (75.76%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 10  TPKLDLKLNLSPPRAN--RGVESPSRSATVSPTSPPTSCVSSE-EEMAAAVRYSNSPEAT 69
           +PKL+LKLNLSPP ++  R V SPSRSAT SPTSPP+SCVSSE  +   +VRYS SPE T
Sbjct: 5   SPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETT 64

Query: 70  SMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNA 106
           SM+LVGCPRCLMYVMLSE+DPKCPKCKSTVLLD LH+NA
Sbjct: 65  SMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENA 103

[Close]

BLAST of Clc04G10730 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.0e-22
Identity = 62/110 (56.36%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 1   MNRRNSGAATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAAAVRYS 60
           M+RRN     PKL+L+LNLSPP +     S  RS   S T+ P+SCVSSE          
Sbjct: 1   MSRRNKNG--PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSE------TNQE 60

Query: 61  NSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTT 111
            +   TSM+LVGCPRCLMYVMLS++DPKCPKCKSTVLLD L +NA   TT
Sbjct: 61  ENETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATT 102

[Close]

BLAST of Clc04G10730 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.9e-09
Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 13  LDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAAAVRYSNSPEATSMMLVG 72
           LDLKLN+          SPS  +++   S  +S  S E E           EA SM++VG
Sbjct: 11  LDLKLNI----------SPSLDSSLLTESSSSSLCSEEAE-------GGGGEAKSMVVVG 70

Query: 73  CPRCLMYVMLS-EEDPKCPKCKSTVLLDVLHDNAAVKTT 111
           CP C+MY++ S E DP+CP+C S VLLD L  N + K+T
Sbjct: 71  CPNCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKST 92

[Close]

BLAST of Clc04G10730 vs. ExPASy TrEMBL
Match: A0A5A7SGG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00770 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 104/115 (90.43%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MNRRNS---GAATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAAAV 60
           MNRRNS   GAATPKL+LKLNLSPPRANRGVESPSRSATVSPTSPP+SCVSSEEEM    
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM---- 60

Query: 61  RYSNSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTTKN 113
           RYSNSPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKT KN
Sbjct: 61  RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 111

[Close]

BLAST of Clc04G10730 vs. ExPASy TrEMBL
Match: A0A0A0KHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454370 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46
Identity = 104/115 (90.43%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MNRRNS---GAATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAAAV 60
           MNRRNS   GAATPKL+LKLNLSPPRANRGVESPSRSATVSPTSPP+SCVSSEEEM    
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM---- 60

Query: 61  RYSNSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTTKN 113
           RYSNSPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKT KN
Sbjct: 61  RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTRKN 111

[Close]

BLAST of Clc04G10730 vs. ExPASy TrEMBL
Match: A0A1S3CHA8 (uncharacterized protein LOC103500924 OS=Cucumis melo OX=3656 GN=LOC103500924 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.2e-46
Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 0


Query: 1   MNRRNS---GAATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAAAV 60
           MNRRNS   GAATPKL+LKLNLSPPRANRGVESPSRSATVSPTSPP+SCVSSEEEM    
Sbjct: 1   MNRRNSGGGGAATPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEM---- 60

Query: 61  RYSNSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTTK 112
           RYSNSPE TSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKT K
Sbjct: 61  RYSNSPETTSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTEK 110

[Close]

BLAST of Clc04G10730 vs. ExPASy TrEMBL
Match: A0A6J1EGT8 (uncharacterized protein LOC111433248 OS=Cucurbita moschata OX=3662 GN=LOC111433248 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 8.9e-46
Identity = 102/118 (86.44%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MNRRNSG-----AATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAA 60
           MNRRNSG     AA PKL+LKLNLSPPRANRGVESPSRSATVSPTSPP+SCVSSEEEM  
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60

Query: 61  A-VRYSNSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTTKN 113
             VRYS+SPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVKT +N
Sbjct: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKTRRN 118

[Close]

BLAST of Clc04G10730 vs. ExPASy TrEMBL
Match: A0A6J1IMT5 (uncharacterized protein LOC111478822 OS=Cucurbita maxima OX=3661 GN=LOC111478822 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 3.4e-45
Identity = 101/118 (85.59%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MNRRNSG-----AATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAA 60
           MNRRNSG     AA PKL+LKLNLSPPRANRGVESPSRSATVSPTSPP+SCVSSEEEM  
Sbjct: 1   MNRRNSGGGGGAAAAPKLELKLNLSPPRANRGVESPSRSATVSPTSPPSSCVSSEEEMTV 60

Query: 61  A-VRYSNSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTTKN 113
             VRYS+SPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDN+AVK  +N
Sbjct: 61  GRVRYSSSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNSAVKNRRN 118

[Close]

BLAST of Clc04G10730 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 142.5 bits (358), Expect = 2.0e-34
Identity = 75/99 (75.76%), Postives = 85/99 (85.86%), Query Frame = 0


Query: 10  TPKLDLKLNLSPPRAN--RGVESPSRSATVSPTSPPTSCVSSE-EEMAAAVRYSNSPEAT 69
           +PKL+LKLNLSPP ++  R V SPSRSAT SPTSPP+SCVSSE  +   +VRYS SPE T
Sbjct: 5   SPKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETT 64

Query: 70  SMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNA 106
           SM+LVGCPRCLMYVMLSE+DPKCPKCKSTVLLD LH+NA
Sbjct: 65  SMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENA 103

[Close]

BLAST of Clc04G10730 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 7.3e-24
Identity = 62/110 (56.36%), Postives = 73/110 (66.36%), Query Frame = 0


Query: 1   MNRRNSGAATPKLDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAAAVRYS 60
           M+RRN     PKL+L+LNLSPP +     S  RS   S T+ P+SCVSSE          
Sbjct: 1   MSRRNKNG--PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSE------TNQE 60

Query: 61  NSPEATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVLHDNAAVKTT 111
            +   TSM+LVGCPRCLMYVMLS++DPKCPKCKSTVLLD L +NA   TT
Sbjct: 61  ENETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATT 102

[Close]

BLAST of Clc04G10730 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 3.5e-10
Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 13  LDLKLNLSPPRANRGVESPSRSATVSPTSPPTSCVSSEEEMAAAVRYSNSPEATSMMLVG 72
           LDLKLN+          SPS  +++   S  +S  S E E           EA SM++VG
Sbjct: 11  LDLKLNI----------SPSLDSSLLTESSSSSLCSEEAE-------GGGGEAKSMVVVG 70

Query: 73  CPRCLMYVMLS-EEDPKCPKCKSTVLLDVLHDNAAVKTT 111
           CP C+MY++ S E DP+CP+C S VLLD L  N + K+T
Sbjct: 71  CPNCIMYIITSLENDPRCPRCNSHVLLDFLTGNHSKKST 92

[Close]

BLAST of Clc04G10730 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 3.1e-06
Identity = 27/68 (39.71%), Postives = 41/68 (60.29%), Query Frame = 0


Query: 33 RSATVSPTSPPTSCVSSEEEMAAAVRYS--NSPEATSMMLVGCPRCLMYVMLSEEDPKCP 92
          RS +   +S   SC++  EE+   V  S  +  EA  M+++GC  C+MYVM+ +E  +CP
Sbjct: 30 RSPSSDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQRCP 89

Query: 93 KCKSTVLL 99
          KCK T L+
Sbjct: 90 KCKCTDLI 97

[Close]

BLAST of Clc04G10730 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 2.9e-04
Identity = 17/37 (45.95%), Postives = 24/37 (64.86%), Query Frame = 0


Query: 65  ATSMMLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDVL 102
           A S +  GCP CL YV +++ +PKCP+C S V L  +
Sbjct: 212 AASQVAAGCPGCLSYVFVAKNNPKCPRCHSFVPLPAM 248

The following BLAST results are available for this feature:

BLAST of Clc04G10730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143338.1	2.2e-46	90.43	uncharacterized protein LOC101217127 [Cucumis sativus] >KAA0025228.1 uncharacter...	[more]
XP_008462606.1	1.1e-45	90.35	PREDICTED: uncharacterized protein LOC103500924, partial [Cucumis melo]	[more]
XP_022925998.1	1.8e-45	86.44	uncharacterized protein LOC111433248 [Cucurbita moschata] >KAG6604328.1 Protein ...	[more]
XP_023543892.1	2.4e-45	85.71	uncharacterized protein LOC111803624 [Cucurbita pepo subsp. pepo]	[more]
XP_022979077.1	7.0e-45	85.59	uncharacterized protein LOC111478822 [Cucurbita maxima]	[more]

BLAST of Clc04G10730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	2.9e-33	75.76	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	1.0e-22	56.36	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FMS4	4.9e-09	41.41	Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Clc04G10730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SGG8	1.1e-46	90.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KHJ4	1.1e-46	90.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454370 PE=4 SV=1	[more]
A0A1S3CHA8	5.2e-46	90.35	uncharacterized protein LOC103500924 OS=Cucumis melo OX=3656 GN=LOC103500924 PE=...	[more]
A0A6J1EGT8	8.9e-46	86.44	uncharacterized protein LOC111433248 OS=Cucurbita moschata OX=3662 GN=LOC1114332...	[more]
A0A6J1IMT5	3.4e-45	85.59	uncharacterized protein LOC111478822 OS=Cucurbita maxima OX=3661 GN=LOC111478822...	[more]

BLAST of Clc04G10730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	2.0e-34	75.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	7.3e-24	56.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G22270.1	3.5e-10	41.41	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52561.1	3.1e-06	39.71	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G16500.1	2.9e-04	45.95	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..48
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 1..112
None	No IPR available	PANTHER	PTHR33177:SF40	SUBFAMILY NOT NAMED	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G10730.1	Clc04G10730.1	mRNA