Clc04G09600 (gene) Watermelon (cordophanus) v2

Overview
NameClc04G09600
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionTranscription initiation factor TFIID subunit 8
LocationClcChr04: 23160186 .. 23163462 (-)
RNA-Seq ExpressionClc04G09600
SyntenyClc04G09600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCATGGAGGTGGGAACATTACGAGAGAGAATGAAAACCAGGTGGATCGTTATAGGAGAGCTGGAGCTGATGATTTTGGGCGAGAGGTGTCGAAGATTGCAGCAGCACAGATATGCCAGAGTCTGGGATTTCAGGGATCGAAGGAGTCTGCTATGGACACGCTTGCGGAAATTGTAATAGTATATCTTAGTGATTTGGGAAAGATGGCGAGTTTCTATTCTAACTTAGCTGGTAGAACTGAGTGTAATGTGTTTGACATTGTTAGAGGACTTAAAGATTTAGAAGCACCTGGGTCTCATCAAGATGCTGAGGTTAGCCGTTGTCTTGCAGGTTCACGTATACTTCAAGAAATTTTTGAGTATGCGAATTCGGTGCAAGAAATTCCATTTGCTCAGCCGGTGCCACAGTTTCCTATTATTAAGAGCTGCAAGGTACTGCCGAGTTTTATTCAAATGAGGGAAACACCTCCTAGCAAGCATATACCCAATTGGCTACCTGCTTTTCCTGATCCCCACACTTACGTTTATACGCCGGTGTGGAATAAGAGGACGACGGACCCTCGCACTGACAAGATTGAGCAAGCAAGGCAGAGGAGAAAGGCAGAAAAGTCATTGTTAAGTCTGCAGCAACGATTAGTAGTTAATACTGGCAATCTAGAGGAAGAAGTACCTAGTTTGGATAGTAACACATCCCATGATACAGAATTTCAACCGAGGGAAAATGCTGTTTCTGTGGTCAAATCTCCTCTTAAACATTCAGATAATGTGTTTGATGATAGCAGTTCTGTGTTAGAGGCATTTGCTCCGGCCATAGAAGCTGTTAAAGGGAGTGGTTTTTATGATGACGAAGAGGGTGAGAAGAAGGCTCTTCCCATAGTTAGGCCTGCTGTTCAATTTAAGTTTAAAACTGGGAAGAAGCTTCTTGGTGATTCTTTGGATTTGAACATTCAAAAGAAAGGAATGGGTAGAACAGTGTCCTTGGTTGGCCGGGATGATGAAAGGGATGATAAGAAACGAAGAGCTGAATACATTCTTAGACAGTCTGTGGAGAATCCGCAAGAACTCAATCAGTTGTGAATAAATATATTGACTGGCGTTCATAATTTAATCTAGGTATTTGGTATTAGCTGGTGCAATTGTTGCTTTAGTTTACAACATATCTTCCTTGTAGTACGGCCATTCTTGTAATTTACATTGAGTTCCTTGTATTTCCACTCAGGAATTTTTCAGAGATGCAAATGCTTGTGAAAAATTTATTGAGAAGATTTCATGTCTCTTTTCATCTTTCACATTGTGTTTTGAACTGTTCGTTCTGTTGTTAAGTTGTGAAATTAGATCTTATGCTCCTTGGTTTGCAAACTTCCCTCTGGGAGTATCAAGTTCTAATGCACATGTAAGAGGTATGCCGCCTTGCTCTGCTAATTAAGAATGCCGTCCAGCAATACTTCTGTTTTGTTTTTCAACAATTTAGACATTTGTACTGCCACTTTTCTTGATACTCAAACACGGTCATACTGCTGATAAGAAAGGAAGCTTAACATTTTATGAAAATGAATAAATGGGCTTTATGTGTTGTTTGTGCTTTATGGACTAAATTTGCTCAGGATATGTAAGATCACTCCTTTTACTGGGCTCTGGCATACGGATCAAACCAGGTGGGTTTCAATCTCCCTTTCAGCTAAATTTCATTGTTCCTTTGATTTTTAGGATTATATGTGAATCTGTTGGTTGGAATATGGACAATGATCTGAACATGTTATAAATATTTTTTCTACAATGGTCAATGCGTGAAACAAGAATGAACTTTTATATTGGTAGTTACTACCTAGGTGACCACTTAATCCCCTTTATATGTGAGACTTAAGACTTCCGGGATAAAATTCTTTGGCTAATATACTACCTAGGTGACCACTTAATCACCTTTATATGAGACTAAGACTTTTGGGATAAAATTCTTTGGCTAACTTTTGGTAGATGCTTAGAACGCCTTTTTATTTAAACCCAAATTCCTTCTCTGCAGGTGCAGCTTGAAATAGGTGGAAGAAAGGAGGATTGCCAAGAGAATCTTAAGGAAACCAGGAATCCACTGGGTTTGTTTTTGCAAGGTAAGTACTGGTATCTGGTAAGTTTCCATTCTTCACAAATTCTGAATTCGCCATATCTTCTTGTCGTCTGACTTCCTGCTTGAAGTTAAAGATTAAATTCTTCCTTATTTTCTTCATGGCAAAGATATGATTAAAAAAAATATTCCATTTCTATTCTACTACGTTTCTGAATGGTTTGGTTTGTCTTTAAGAGTAAAACGTTAAGCTGCAGGTAAAGAAAGAAAATAAACCACCTCAAACCTGCATCATGAAAGAAAGATGATGTAATGAATGTACTTTGTAAATGCATGGGACCCTACCAAATCATTACATTATCTTTACCATATTTGTAAGTGCAGGACTCCTAGTGAGGTTCGGTCCTTTAGTTGCTTTCATGTTTCTTTGTGGGCTTCAGTTTTAAAGGCCTTTTGAACTATTATATAGATGTTATTTTGCATAGTTGGGAGCTCCTTTGTTTAGGGATTGTCTCAATGTTGGGAGCCCCTTCAGGTTCGGTCCCTTTGTTTTCTTCTTCAACATCTAGTCATGGGACCATCATTCTAATTGTGATCTGGAAATTGACCATTGATTGTCTCATTGTTGTCTGGAAAGAGATTATTGATTGAGTTATTGAATATTGGACGAGGAAAGCATTTGATACACACAAGTTTCAAAAGGGTCCCCATGCAAGCAAGAAATAACAGGTCACAAATAGTAAATGTAATTTGGAAAAAGTTTTGTTTTGCATAGCATTCTGTTTTAATTGTTCACAGCTTTTACAATTGTCATTTATCTTTGTTGCTATTTTGTTAACTAGGTCCTTTACCCTGCTGGAATGAATTTGCGTCTTCCATAGGGCAAACACTCACTGCACTTCAAGTTTTACCCAGACTACTTAAGGCTTTGGCAAAATAAGCTCATACAATGTTTCTTGAGCTGGGACGGTCACAACAACACACTGCCGTTGCGGTGACCAGCACTGACCATTGGGAAGTTTAAGCTTGGCCTCGGTGTGCAAAGTGCAGACCCTATGCCGGTATCTTTCCAAGTTTCAATTACGCAATATTTTGAATCTGAATCCTTATGATTTCAGGCTGTTGATATTGAACTAATGAGAAACGTACATTGATTTTAGGATATTCTCATTGATATTTCTATGGCTTATATGTGTCTGTAGATGACAATTGAAC

mRNA sequence

ATGAGCCATGGAGGTGGGAACATTACGAGAGAGAATGAAAACCAGGTGGATCGTTATAGGAGAGCTGGAGCTGATGATTTTGGGCGAGAGGTGTCGAAGATTGCAGCAGCACAGATATGCCAGAGTCTGGGATTTCAGGGATCGAAGGAGTCTGCTATGGACACGCTTGCGGAAATTGTAATAGTATATCTTAGTGATTTGGGAAAGATGGCGAGTTTCTATTCTAACTTAGCTGGTAGAACTGAGTGTAATGTGTTTGACATTGTTAGAGGACTTAAAGATTTAGAAGCACCTGGGTCTCATCAAGATGCTGAGGTTAGCCGTTGTCTTGCAGGTTCACGTATACTTCAAGAAATTTTTGAGTATGCGAATTCGGTGCAAGAAATTCCATTTGCTCAGCCGGTGCCACAGTTTCCTATTATTAAGAGCTGCAAGGTACTGCCGAGTTTTATTCAAATGAGGGAAACACCTCCTAGCAAGCATATACCCAATTGGCTACCTGCTTTTCCTGATCCCCACACTTACGTTTATACGCCGGTGTGGAATAAGAGGACGACGGACCCTCGCACTGACAAGATTGAGCAAGCAAGGCAGAGGAGAAAGGCAGAAAAGTCATTGTTAAGTCTGCAGCAACGATTAGTAGTTAATACTGGCAATCTAGAGGAAGAAGTACCTAGTTTGGATAGTAACACATCCCATGATACAGAATTTCAACCGAGGGAAAATGCTGTTTCTGTGGTCAAATCTCCTCTTAAACATTCAGATAATGTGTTTGATGATAGCAGTTCTGTGTTAGAGGCATTTGCTCCGGCCATAGAAGCTGTTAAAGGGAGTGGTTTTTATGATGACGAAGAGGGTGAGAAGAAGGCTCTTCCCATAGTTAGGCCTGCTGTTCAATTTAAGTTTAAAACTGGGAAGAAGCTTCTTGGTGATTCTTTGGATTTGAACATTCAAAAGAAAGGAATGGGTAGAACAGTGTCCTTGGTTGGCCGGGATGATGAAAGGGATGATAAGAAACGAAGAGCTGAATACATTCTTAGACAGTCTGTGGAGAATCCGCAAGAACTCAATCAGTTATCTTATGCTCCTTGGTTTGCAAACTTCCCTCTGGGAGTATCAAGTTCTAATGCACATGTAAGAGGATATGTAAGATCACTCCTTTTACTGGGCTCTGGCATACGGATCAAACCAGGTGGGTTTCAATCTCCCTTTCAGCTAAATTTCATTGTTCCTTTGATTTTTAGGATTATATGTGAATCTGTGCAGCTTGAAATAGGTGGAAGAAAGGAGGATTGCCAAGAGAATCTTAAGGAAACCAGGAATCCACTGGGTTTGTTTTTGCAAGGTAAGTACTGGTATCTGGTCCTTTACCCTGCTGGAATGAATTTGCGTCTTCCATAGGGCAAACACTCACTGCACTTCAAGTTTTACCCAGACTACTTAAGGCTTTGGCAAAATAAGCTCATACAATGTTTCTTGAGCTGGGACGGTCACAACAACACACTGCCGTTGCGGTGACCAGCACTGACCATTGGGAAGTTTAAGCTTGGCCTCGGTGTGCAAAGTGCAGACCCTATGCCGGTATCTTTCCAAGTTTCAATTACGCAATATTTTGAATCTGAATCCTTATGATTTCAGGCTGTTGATATTGAACTAATGAGAAACGTACATTGATTTTAGGATATTCTCATTGATATTTCTATGGCTTATATGTGTCTGTAGATGACAATTGAAC

Coding sequence (CDS)

ATGAGCCATGGAGGTGGGAACATTACGAGAGAGAATGAAAACCAGGTGGATCGTTATAGGAGAGCTGGAGCTGATGATTTTGGGCGAGAGGTGTCGAAGATTGCAGCAGCACAGATATGCCAGAGTCTGGGATTTCAGGGATCGAAGGAGTCTGCTATGGACACGCTTGCGGAAATTGTAATAGTATATCTTAGTGATTTGGGAAAGATGGCGAGTTTCTATTCTAACTTAGCTGGTAGAACTGAGTGTAATGTGTTTGACATTGTTAGAGGACTTAAAGATTTAGAAGCACCTGGGTCTCATCAAGATGCTGAGGTTAGCCGTTGTCTTGCAGGTTCACGTATACTTCAAGAAATTTTTGAGTATGCGAATTCGGTGCAAGAAATTCCATTTGCTCAGCCGGTGCCACAGTTTCCTATTATTAAGAGCTGCAAGGTACTGCCGAGTTTTATTCAAATGAGGGAAACACCTCCTAGCAAGCATATACCCAATTGGCTACCTGCTTTTCCTGATCCCCACACTTACGTTTATACGCCGGTGTGGAATAAGAGGACGACGGACCCTCGCACTGACAAGATTGAGCAAGCAAGGCAGAGGAGAAAGGCAGAAAAGTCATTGTTAAGTCTGCAGCAACGATTAGTAGTTAATACTGGCAATCTAGAGGAAGAAGTACCTAGTTTGGATAGTAACACATCCCATGATACAGAATTTCAACCGAGGGAAAATGCTGTTTCTGTGGTCAAATCTCCTCTTAAACATTCAGATAATGTGTTTGATGATAGCAGTTCTGTGTTAGAGGCATTTGCTCCGGCCATAGAAGCTGTTAAAGGGAGTGGTTTTTATGATGACGAAGAGGGTGAGAAGAAGGCTCTTCCCATAGTTAGGCCTGCTGTTCAATTTAAGTTTAAAACTGGGAAGAAGCTTCTTGGTGATTCTTTGGATTTGAACATTCAAAAGAAAGGAATGGGTAGAACAGTGTCCTTGGTTGGCCGGGATGATGAAAGGGATGATAAGAAACGAAGAGCTGAATACATTCTTAGACAGTCTGTGGAGAATCCGCAAGAACTCAATCAGTTATCTTATGCTCCTTGGTTTGCAAACTTCCCTCTGGGAGTATCAAGTTCTAATGCACATGTAAGAGGATATGTAAGATCACTCCTTTTACTGGGCTCTGGCATACGGATCAAACCAGGTGGGTTTCAATCTCCCTTTCAGCTAAATTTCATTGTTCCTTTGATTTTTAGGATTATATGTGAATCTGTGCAGCTTGAAATAGGTGGAAGAAAGGAGGATTGCCAAGAGAATCTTAAGGAAACCAGGAATCCACTGGGTTTGTTTTTGCAAGGTAAGTACTGGTATCTGGTCCTTTACCCTGCTGGAATGAATTTGCGTCTTCCATAG

Protein sequence

MSHGGGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPGSHQDAEVSRCLAGSRILQEIFEYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTPVWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQPRENAVSVVKSPLKHSDNVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQFKFKTGKKLLGDSLDLNIQKKGMGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQLSYAPWFANFPLGVSSSNAHVRGYVRSLLLLGSGIRIKPGGFQSPFQLNFIVPLIFRIICESVQLEIGGRKEDCQENLKETRNPLGLFLQGKYWYLVLYPAGMNLRLP
Homology
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BLAST of Clc04G09600 vs. NCBI nr
Match: XP_038882077.1 (transcription initiation factor TFIID subunit 8 [Benincasa hispida])

HSP 1 Score: 676.8 bits (1745), Expect = 1.3e-190
Identity = 341/359 (94.99%), Postives = 348/359 (96.94%), Query Frame = 0 

Query: 1   MSHGGGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVD  R+ GADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDHIRKTGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPGSHQDAEVSRCLAGSRILQEIF 120
           IVYLSDLGKM SFYSNLAGRTECNVFDIVRGLKDLEAPGSHQD EVSRCLAGSRI+QEIF
Sbjct: 61  IVYLSDLGKMTSFYSNLAGRTECNVFDIVRGLKDLEAPGSHQDGEVSRCLAGSRIIQEIF 120

Query: 121 EYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTPV 180
           EY NSVQEIPFAQPVP+FPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTY+YTPV
Sbjct: 121 EYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQPR 240
           WNKR TDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEV SLDSNTSHDTE QPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVLSLDSNTSHDTELQPR 240

Query: 241 ENAVSVVKSPLKHSDNVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQF 300
           ENAVSVVKSPLKHSDN+FDDSSSVLEAFAPAIEAVKGSGFYDDE+GEKKA+PIVR AVQF
Sbjct: 241 ENAVSVVKSPLKHSDNMFDDSSSVLEAFAPAIEAVKGSGFYDDEDGEKKAIPIVRSAVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGMGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           KFKTGKKLLGDSLDLNIQKKGMGRTVS VGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLNIQKKGMGRTVSFVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]
BLAST of Clc04G09600 vs. NCBI nr
Match: KAA0063816.1 (transcription initiation factor TFIID subunit 8-like [Cucumis melo var. makuwa] >TYK07308.1 transcription initiation factor TFIID subunit 8-like [Cucumis melo var. makuwa])

HSP 1 Score: 668.7 bits (1724), Expect = 3.7e-188
Identity = 336/360 (93.33%), Postives = 345/360 (95.83%), Query Frame = 0 

Query: 1   MSHGGGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDR+RR G DDFGR+VSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGRQVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPG-SHQDAEVSRCLAGSRILQEI 120
           +VYLSDLGKMASFYSNLAGRTECNVFDIVRG KDLEAPG SHQDAEVSRCLAGSR +QEI
Sbjct: 61  VVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTP 180
           FEY NSVQEIPFAQPVPQFPIIKSCKVLPSFIQM+ETPPSKHIPNWLPAFPDPHTY+YTP
Sbjct: 121 FEYVNSVQEIPFAQPVPQFPIIKSCKVLPSFIQMKETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQP 240
           VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRL+VNTGNLEEE+PS DSNTSHD E QP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLIVNTGNLEEELPSFDSNTSHDIELQP 240

Query: 241 RENAVSVVKSPLKHSDNVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQ 300
           REN VS VKS LKHSDNVFD+SS VLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRP VQ
Sbjct: 241 RENVVSAVKSSLKHSDNVFDESSHVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPVVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           FKFKTGKKLLGDSLDLNIQKKGMGRTV LVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]
BLAST of Clc04G09600 vs. NCBI nr
Match: XP_008462468.1 (PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo])

HSP 1 Score: 666.0 bits (1717), Expect = 2.4e-187
Identity = 335/360 (93.06%), Postives = 344/360 (95.56%), Query Frame = 0 

Query: 1   MSHGGGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDR+RR G DDFGR+VSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGRQVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPG-SHQDAEVSRCLAGSRILQEI 120
           +VYLSDLGKMASFYSNLAGRTECNVFDIVRG KDLEAPG SHQDAEVSRCLAGSR +QEI
Sbjct: 61  VVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTP 180
           FEY NSVQEIPFAQPVP FPIIKSCKVLPSFIQM+ETPPSKHIPNWLPAFPDPHTY+YTP
Sbjct: 121 FEYVNSVQEIPFAQPVPLFPIIKSCKVLPSFIQMKETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQP 240
           VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRL+VNTGNLEEE+PS DSNTSHD E QP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLIVNTGNLEEELPSFDSNTSHDIELQP 240

Query: 241 RENAVSVVKSPLKHSDNVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQ 300
           REN VS VKS LKHSDNVFD+SS VLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRP VQ
Sbjct: 241 RENVVSAVKSSLKHSDNVFDESSHVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPVVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           FKFKTGKKLLGDSLDLNIQKKGMGRTV LVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]
BLAST of Clc04G09600 vs. NCBI nr
Match: XP_011657663.1 (transcription initiation factor TFIID subunit 8 isoform X1 [Cucumis sativus])

HSP 1 Score: 665.6 bits (1716), Expect = 3.1e-187
Identity = 338/360 (93.89%), Postives = 343/360 (95.28%), Query Frame = 0 

Query: 1   MSHGGGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDR+RR G DDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPG-SHQDAEVSRCLAGSRILQEI 120
           IVYLSDLGKMASFYSNLAGRTECNVFDIVRG KDLEAPG SHQDAEVSRCLAGSR +QEI
Sbjct: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTP 180
           FEY NSVQEIPFAQPVP+FPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTY+YTP
Sbjct: 121 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQP 240
           VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEE+PS DSNT HD E QP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP 240

Query: 241 RENAVSVVKSPLKHSDNVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQ 300
           REN VSVVKS LKHSDN FDDSS VLEAFAPAIEAVKGSGFYDDEEG KKALPIVRP VQ
Sbjct: 241 RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPLVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           FKFKTGKKLLGDSLDLNIQKKGMGRTV LVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]
BLAST of Clc04G09600 vs. NCBI nr
Match: XP_023544694.1 (transcription initiation factor TFIID subunit 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 652.1 bits (1681), Expect = 3.5e-183
Identity = 329/359 (91.64%), Postives = 341/359 (94.99%), Query Frame = 0 

Query: 1   MSHGGGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENEN  DR+RRAG DDFGREVSK+AAAQICQSLGFQGSKESA+DTLAEIV
Sbjct: 1   MSHGGGNITRENENPADRFRRAGGDDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPGSHQDAEVSRCLAGSRILQEIF 120
           IVYLSDLGKMA+FYSNLAGRTECNVFDI+RGLKDL APGSHQDAEVSRCLAGSR +QEIF
Sbjct: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120

Query: 121 EYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTPV 180
           EY NSVQEIPFAQP+ QFPIIKS KVLPSFIQMRETPPSKHIPNWLPAFPDPHTY+YTPV
Sbjct: 121 EYVNSVQEIPFAQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQPR 240
           WNKR TDPRTDKIEQARQRRKAEKSLLSLQQ+LVVNT +LEEE+PSLDS+TSHDTE QPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSTSHDTELQPR 240

Query: 241 ENAVSVVKSPLKHSDNVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQF 300
           EN VSVVKSPLKHSD VFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKK LPIVRPAVQF
Sbjct: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGMGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           KFKTGKKLLGDSLDL IQKKG GR  SLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]
BLAST of Clc04G09600 vs. ExPASy Swiss-Prot
Match: Q9SYZ9 (Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.8e-73
Identity = 154/338 (45.56%), Postives = 219/338 (64.79%), Query Frame = 0 

Query: 26  DFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLGKMASFYSNLAGRTECNV 85
           +F    +K A AQ+C+S+G++  K+ A+++L+   + Y+  LGK A+ ++NL GR++CNV
Sbjct: 25  EFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQCNV 84

Query: 86  FDIVRGLKDLEAPGSHQDAEVSRCLAGSRI-LQEIFEYANSVQEIPFAQPVPQFPII--- 145
           FDI+  L DL      Q      C  G  I L+EI ++ NS +E+PF+QP+P FP+    
Sbjct: 85  FDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAISD 144

Query: 146 KSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTPVWNKRTTDPRTDKIEQARQRRK 205
           +S K++PSF+++ ETPP KHIP WLPAFPDPHTY  TP+W +R +DPR DKIEQARQRRK
Sbjct: 145 RSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRK 204

Query: 206 AEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQPRENAVSVVKSPLKHSDNVFDDS 265
           AE++LLSLQ++LV    +       +D       E +  E+ +  V S  K  +++  D 
Sbjct: 205 AERALLSLQRKLVCKISSRNPVWGDMDGVKE---EMRDDESELRSVSSGEK-VESLNRDG 264

Query: 266 SSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQFKFKTGKKLLGDSLDLNIQKKG 325
            SV+EAFAPA+EA +  GF  +   E K     +P    K +T KK LG  LDL++Q KG
Sbjct: 265 LSVIEAFAPAMEAAR-DGFSSEAHTEWKK---NKPVALSKLRTEKKFLGQPLDLSLQMKG 324

Query: 326 MGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
             R +S V R+++RDDK+RRAE+ILRQ +ENP +LNQL
Sbjct: 325 EDRPISFV-REEDRDDKRRRAEFILRQCMENPVDLNQL 353

[Close]
BLAST of Clc04G09600 vs. ExPASy Swiss-Prot
Match: A7MAZ4 (Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-11
Identity = 59/214 (27.57%), Postives = 103/214 (48.13%), Query Frame = 0 

Query: 9   TRENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLG 68
           ++++ N  D Y  A      R   ++  + +    GF+ +++++++TL E++  Y+S++G
Sbjct: 19  SKQSTNPADNYHLA-----RRRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIG 78

Query: 69  KMASFYSNLAGRTECNVFDIVRGLKDLEAPGSHQDAEVSRCLAGSRILQEIFEYANSVQE 128
           + A  Y     RT+  + DIV  L ++   G + D               +  YA   Q 
Sbjct: 79  RSAKSYCEHTARTQPTLSDIVVTLVEM---GFNVDT--------------LPAYAKRSQR 138

Query: 129 IPF-AQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTPVWNKRTTD 188
           +   A PV   P+  + K L +  Q R  PP  HIP+  P FPDPHTY+ TP + +  +D
Sbjct: 139 MVITAPPVTNQPV--TPKALTAG-QNRPHPP--HIPSHFPEFPDPHTYIKTPTYREPVSD 198

Query: 189 PRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLE 222
            +  + + A QRR  E++L     R +  TG  +
Sbjct: 199 YQVLREKAASQRRDVERAL----TRFMAKTGETQ 201

[Close]
BLAST of Clc04G09600 vs. ExPASy Swiss-Prot
Match: Q9EQH4 (Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-11
Identity = 82/332 (24.70%), Postives = 141/332 (42.47%), Query Frame = 0 

Query: 5   GGNITR----ENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 64
           GG+ TR    ++ N  D Y  A      R   ++  + +    GF+ +++++++TL E++
Sbjct: 9   GGSGTRPGSKQSTNPADNYHLA-----RRRTLQVVVSSLLTEAGFESAEKASVETLTEML 68

Query: 65  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPGSHQDAEVSRCLAGSRILQEIF 124
             Y+S++G+ A  Y     RT+  + DIV  L ++   G + D               + 
Sbjct: 69  QSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEM---GFNVDT--------------LP 128

Query: 125 EYANSVQEIPF-AQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTP 184
            YA   Q +   A PV   P+  + K L +  Q R  PP  HIP+  P FPDPHTY+ TP
Sbjct: 129 AYAKRSQRMVITAPPVTNQPV--TPKALTAG-QNRPHPP--HIPSHFPEFPDPHTYIKTP 188

Query: 185 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEE----------------- 244
            + +  +D +  + + A QRR  E++L     R +  TG  +                  
Sbjct: 189 TYREPVSDYQILREKAASQRRDVERAL----TRFMAKTGETQSLFKDDVSTFPLIAARPF 248

Query: 245 EVPSLDSNTSHDTEFQPRENAVSVVKSPLKHSDN----VFDDSSSVLEAFAPAIEAVKGS 304
            +P L +    + E Q  E   S  +     ++N    +  D S   +  A  ++  + S
Sbjct: 249 TIPYLTALLPSELEIQQMEETDSSEQEEQTDTENNALHISTDDSGAEKESASVLQ--QSS 307

Query: 305 GFYDDEEGEKKAL--PIVRPAVQFKFKTGKKL 309
                  GE+  +  P +RP  + K +  K L
Sbjct: 309 SLSGSRNGEESVIDNPYLRPVKKPKIRRKKSL 307

[Close]
BLAST of Clc04G09600 vs. ExPASy Swiss-Prot
Match: Q7Z7C8 (Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.0e-11
Identity = 63/222 (28.38%), Postives = 106/222 (47.75%), Query Frame = 0 

Query: 5   GGNITR----ENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 64
           GG+ TR    ++ N  D Y  A      R   ++  + +    GF+ +++++++TL E++
Sbjct: 11  GGSGTRSGSKQSTNPADNYHLA-----RRRTLQVVVSSLLTEAGFESAEKASVETLTEML 70

Query: 65  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPGSHQDAEVSRCLAGSRILQEIF 124
             Y+S++G+ A  Y     RT+  + DIV  L ++   G + D               + 
Sbjct: 71  QSYISEIGRSAKSYCEHTARTQPTLSDIVVTLVEM---GFNVDT--------------LP 130

Query: 125 EYANSVQEIPF-AQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTP 184
            YA   Q +   A PV   P+  + K L +  Q R  PP  HIP+  P FPDPHTY+ TP
Sbjct: 131 AYAKRSQRMVITAPPVTNQPV--TPKALTAG-QNRPHPP--HIPSHFPEFPDPHTYIKTP 190

Query: 185 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLE 222
            + +  +D +  + + A QRR  E++L     R +  TG  +
Sbjct: 191 TYREPVSDYQVLREKAASQRRDVERAL----TRFMAKTGETQ 201

[Close]
BLAST of Clc04G09600 vs. ExPASy Swiss-Prot
Match: Q7ZYA2 (Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf8 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.2e-10
Identity = 52/195 (26.67%), Postives = 91/195 (46.67%), Query Frame = 0 

Query: 29  REVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLGKMASFYSNLAGRTECNVFDI 88
           R   ++  + +    GF  ++++A+++L E++  YLS++G+ A  Y     RT+  + DI
Sbjct: 24  RRTLQVVVSSLLTEAGFDSAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDI 83

Query: 89  VRGLKDLEAPGSHQDAEVSRCLAGSRILQEIFEYANSVQEIPF-AQPVPQFPIIKSCKVL 148
           V  L ++   G + D+              +  YA   Q +   A PV   P++      
Sbjct: 84  VVTLIEM---GFNVDS--------------LPAYAKRSQRMVITAPPVTNNPVV------ 143

Query: 149 PSFIQMRETPP-SKHIPNWLPAFPDPHTYVYTPVWNKRTTDPRTDKIEQARQRRKAEKSL 208
           P  +   +  P   HIP+  P FPDPHTY+ TP + +   D +  + + A QRR  E++L
Sbjct: 144 PKALSAGDNKPHPAHIPSHFPEFPDPHTYIKTPTYREPVCDYQVLREKAASQRRDVERAL 191

Query: 209 LSLQQRLVVNTGNLE 222
                R +  TG  +
Sbjct: 204 ----TRFMAKTGETQ 191

[Close]
BLAST of Clc04G09600 vs. ExPASy TrEMBL
Match: A0A5D3C832 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00220 PE=3 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 1.8e-188
Identity = 336/360 (93.33%), Postives = 345/360 (95.83%), Query Frame = 0 

Query: 1   MSHGGGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDR+RR G DDFGR+VSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGRQVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPG-SHQDAEVSRCLAGSRILQEI 120
           +VYLSDLGKMASFYSNLAGRTECNVFDIVRG KDLEAPG SHQDAEVSRCLAGSR +QEI
Sbjct: 61  VVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTP 180
           FEY NSVQEIPFAQPVPQFPIIKSCKVLPSFIQM+ETPPSKHIPNWLPAFPDPHTY+YTP
Sbjct: 121 FEYVNSVQEIPFAQPVPQFPIIKSCKVLPSFIQMKETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQP 240
           VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRL+VNTGNLEEE+PS DSNTSHD E QP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLIVNTGNLEEELPSFDSNTSHDIELQP 240

Query: 241 RENAVSVVKSPLKHSDNVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQ 300
           REN VS VKS LKHSDNVFD+SS VLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRP VQ
Sbjct: 241 RENVVSAVKSSLKHSDNVFDESSHVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPVVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           FKFKTGKKLLGDSLDLNIQKKGMGRTV LVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]
BLAST of Clc04G09600 vs. ExPASy TrEMBL
Match: A0A1S3CH15 (Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC103500817 PE=3 SV=1)

HSP 1 Score: 666.0 bits (1717), Expect = 1.1e-187
Identity = 335/360 (93.06%), Postives = 344/360 (95.56%), Query Frame = 0 

Query: 1   MSHGGGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDR+RR G DDFGR+VSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGRQVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPG-SHQDAEVSRCLAGSRILQEI 120
           +VYLSDLGKMASFYSNLAGRTECNVFDIVRG KDLEAPG SHQDAEVSRCLAGSR +QEI
Sbjct: 61  VVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTP 180
           FEY NSVQEIPFAQPVP FPIIKSCKVLPSFIQM+ETPPSKHIPNWLPAFPDPHTY+YTP
Sbjct: 121 FEYVNSVQEIPFAQPVPLFPIIKSCKVLPSFIQMKETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQP 240
           VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRL+VNTGNLEEE+PS DSNTSHD E QP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLIVNTGNLEEELPSFDSNTSHDIELQP 240

Query: 241 RENAVSVVKSPLKHSDNVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQ 300
           REN VS VKS LKHSDNVFD+SS VLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRP VQ
Sbjct: 241 RENVVSAVKSSLKHSDNVFDESSHVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPVVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           FKFKTGKKLLGDSLDLNIQKKGMGRTV LVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]
BLAST of Clc04G09600 vs. ExPASy TrEMBL
Match: A0A0A0KF51 (Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Csa_6G446430 PE=3 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 1.5e-187
Identity = 338/360 (93.89%), Postives = 343/360 (95.28%), Query Frame = 0 

Query: 1   MSHGGGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENENQVDR+RR G DDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV
Sbjct: 1   MSHGGGNITRENENQVDRFRRGGGDDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60

Query: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPG-SHQDAEVSRCLAGSRILQEI 120
           IVYLSDLGKMASFYSNLAGRTECNVFDIVRG KDLEAPG SHQDAEVSRCLAGSR +QEI
Sbjct: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGFKDLEAPGSSHQDAEVSRCLAGSRTIQEI 120

Query: 121 FEYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTP 180
           FEY NSVQEIPFAQPVP+FPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTY+YTP
Sbjct: 121 FEYVNSVQEIPFAQPVPRFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTP 180

Query: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQP 240
           VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEE+PS DSNT HD E QP
Sbjct: 181 VWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEELPSFDSNTPHDIELQP 240

Query: 241 RENAVSVVKSPLKHSDNVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQ 300
           REN VSVVKS LKHSDN FDDSS VLEAFAPAIEAVKGSGFYDDEEG KKALPIVRP VQ
Sbjct: 241 RENVVSVVKSSLKHSDNDFDDSSHVLEAFAPAIEAVKGSGFYDDEEGVKKALPIVRPLVQ 300

Query: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           FKFKTGKKLLGDSLDLNIQKKGMGRTV LVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 FKFKTGKKLLGDSLDLNIQKKGMGRTVYLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360

[Close]
BLAST of Clc04G09600 vs. ExPASy TrEMBL
Match: A0A6J1EGW4 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN=LOC111433266 PE=3 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.5e-182
Identity = 327/359 (91.09%), Postives = 340/359 (94.71%), Query Frame = 0 

Query: 1   MSHGGGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENEN  DR+RRAGADDFGREVSK+AAAQICQSLGFQGSKESA+DTLAEIV
Sbjct: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPGSHQDAEVSRCLAGSRILQEIF 120
           IVYLSDLGKMA+FYSNLAGRTECNVFDI+RGLKDL APGSHQDAEVSRCLAGSR +QEIF
Sbjct: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDAEVSRCLAGSRTIQEIF 120

Query: 121 EYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTPV 180
           EY NSVQEIPF+QP+ QFPIIKS KVLPSFIQMRETPPSKHIPNWLPAFPDPHTY+YTPV
Sbjct: 121 EYVNSVQEIPFSQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQPR 240
           WNKR TDPRTDKIEQARQRRKAEKSLLSLQQ+LVVNT +LEEE+PSLDS+ SHDTE QPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240

Query: 241 ENAVSVVKSPLKHSDNVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQF 300
           EN VSVVKSPLKHSD VFDDSSSVLE FAPAIEAVKGSGFYDDEEGEKK LPIVRPAVQF
Sbjct: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEVFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGMGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           KFKTGKKLLGDSLDL IQKKG GR  SLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]
BLAST of Clc04G09600 vs. ExPASy TrEMBL
Match: A0A6J1IV18 (Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=LOC111478655 PE=3 SV=1)

HSP 1 Score: 647.5 bits (1669), Expect = 4.2e-182
Identity = 327/359 (91.09%), Postives = 339/359 (94.43%), Query Frame = 0 

Query: 1   MSHGGGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIV 60
           MSHGGGNITRENEN  DR+RRAGADDFGREVSK+AAAQICQSLGFQGSKESA+DTLAEIV
Sbjct: 1   MSHGGGNITRENENPADRFRRAGADDFGREVSKVAAAQICQSLGFQGSKESALDTLAEIV 60

Query: 61  IVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEAPGSHQDAEVSRCLAGSRILQEIF 120
           IVYLSDLGKMA+FYSNLAGRTECNVFDI+RGLKDL APGSHQD EVSRCLAGS  +QEIF
Sbjct: 61  IVYLSDLGKMANFYSNLAGRTECNVFDIIRGLKDLGAPGSHQDDEVSRCLAGSHTIQEIF 120

Query: 121 EYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTPV 180
           EY NSVQEIPFAQP+ QFPIIKS KVLPSFIQMRETPPSKHIPNWLPAFPDPHTY+YTPV
Sbjct: 121 EYVNSVQEIPFAQPMAQFPIIKSSKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYIYTPV 180

Query: 181 WNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQPR 240
           WNKR TDPRTDKIEQARQRRKAEKSLLSLQQ+LVVNT +LEEE+PSLDS+ SHDTE QPR
Sbjct: 181 WNKRMTDPRTDKIEQARQRRKAEKSLLSLQQQLVVNTDHLEEELPSLDSSASHDTELQPR 240

Query: 241 ENAVSVVKSPLKHSDNVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQF 300
           EN VSVVKSPLKHSD VFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKK LPIVRPAVQF
Sbjct: 241 ENTVSVVKSPLKHSDTVFDDSSSVLEAFAPAIEAVKGSGFYDDEEGEKKELPIVRPAVQF 300

Query: 301 KFKTGKKLLGDSLDLNIQKKGMGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
           KFKTGKKLLGDSLDL IQKKG GR  SLVGRDDERDDKKRRAEYILRQSVENPQELNQL
Sbjct: 301 KFKTGKKLLGDSLDLIIQKKGTGRRGSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 359

[Close]
BLAST of Clc04G09600 vs. TAIR 10
Match: AT4G34340.1 (TBP-associated factor 8 )

HSP 1 Score: 278.1 bits (710), Expect = 1.3e-74
Identity = 154/338 (45.56%), Postives = 219/338 (64.79%), Query Frame = 0 

Query: 26  DFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLGKMASFYSNLAGRTECNV 85
           +F    +K A AQ+C+S+G++  K+ A+++L+   + Y+  LGK A+ ++NL GR++CNV
Sbjct: 25  EFSHAAAKAAVAQVCESVGYENFKDPALESLSGFALQYILQLGKTATSFANLTGRSQCNV 84

Query: 86  FDIVRGLKDLEAPGSHQDAEVSRCLAGSRI-LQEIFEYANSVQEIPFAQPVPQFPII--- 145
           FDI+  L DL      Q      C  G  I L+EI ++ NS +E+PF+QP+P FP+    
Sbjct: 85  FDIILALDDLTDNNGEQGISSESCSLGRSIKLREIIDFVNSSEEVPFSQPLPSFPVAISD 144

Query: 146 KSCKVLPSFIQMRETPPSKHIPNWLPAFPDPHTYVYTPVWNKRTTDPRTDKIEQARQRRK 205
           +S K++PSF+++ ETPP KHIP WLPAFPDPHTY  TP+W +R +DPR DKIEQARQRRK
Sbjct: 145 RSRKMIPSFVEIGETPPGKHIPLWLPAFPDPHTYKETPMWIERVSDPRGDKIEQARQRRK 204

Query: 206 AEKSLLSLQQRLVVNTGNLEEEVPSLDSNTSHDTEFQPRENAVSVVKSPLKHSDNVFDDS 265
           AE++LLSLQ++LV    +       +D       E +  E+ +  V S  K  +++  D 
Sbjct: 205 AERALLSLQRKLVCKISSRNPVWGDMDGVKE---EMRDDESELRSVSSGEK-VESLNRDG 264

Query: 266 SSVLEAFAPAIEAVKGSGFYDDEEGEKKALPIVRPAVQFKFKTGKKLLGDSLDLNIQKKG 325
            SV+EAFAPA+EA +  GF  +   E K     +P    K +T KK LG  LDL++Q KG
Sbjct: 265 LSVIEAFAPAMEAAR-DGFSSEAHTEWKK---NKPVALSKLRTEKKFLGQPLDLSLQMKG 324

Query: 326 MGRTVSLVGRDDERDDKKRRAEYILRQSVENPQELNQL 360
             R +S V R+++RDDK+RRAE+ILRQ +ENP +LNQL
Sbjct: 325 EDRPISFV-REEDRDDKRRRAEFILRQCMENPVDLNQL 353

[Close]
BLAST of Clc04G09600 vs. TAIR 10
Match: AT5G15570.1 (Bromodomain transcription factor )

HSP 1 Score: 133.3 bits (334), Expect = 5.2e-31
Identity = 81/247 (32.79%), Postives = 130/247 (52.63%), Query Frame = 0 

Query: 1   MSHGGGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQS---------------LGF 60
           M +GGG    +      +   +  +DF   ++++A AQIC+S               L F
Sbjct: 1   MINGGGEGGSQRRELQGKRSMSRGNDFAYALARMATAQICESVEINSYQESSQSREGLRF 60

Query: 61  QGSKESAMDTLAEIVIVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDLEA----PGSH 120
              +E+A++TL ++VI Y+ ++GK A FY N+AGR E N  DIV+ L+DL +     G+H
Sbjct: 61  SSFQETALETLTDVVIQYIQNIGKTAQFYVNMAGRVESNALDIVQALEDLGSGLGFDGAH 120

Query: 121 QDAEVSRCLAGSRILQEIFEYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKH 180
              +V  CLA S ++++I  Y    +EIPF   +P+FP  +  +  PSF  +   PP +H
Sbjct: 121 ---DVEHCLADSGVVKDIIRYTGEAEEIPFVYSLPRFPFNRGKRPAPSFSDIGVEPPDEH 180

Query: 181 IPNWLPAFPDPHTYVYTPVWNKRTTDPRTDKIEQARQRRKAEKSLLSLQQRLVVNTGNLE 229
           IP WLPAFP+          +  + +   DKIE+  Q R    SL+S+QQ + V+   ++
Sbjct: 181 IPVWLPAFPETK-------MSNGSEEINVDKIERDVQSRDNGSSLMSVQQSVDVDRLKVQ 237

[Close]
BLAST of Clc04G09600 vs. TAIR 10
Match: AT3G02160.1 (Bromodomain transcription factor )

HSP 1 Score: 124.0 bits (310), Expect = 3.1e-28
Identity = 66/182 (36.26%), Postives = 101/182 (55.49%), Query Frame = 0 

Query: 5   GGNITRENENQVDRYRRAGADDFGREVSKIAAAQICQS--------------LGFQGSKE 64
           GG+  RE   +   +R    +DF   ++++A AQIC+S              + F   +E
Sbjct: 24  GGSQQRELHGKRKLFR---GNDFAFSIARMAVAQICESVEVNPYQESQTREGVRFSSFQE 83

Query: 65  SAMDTLAEIVIVYLSDLGKMASFYSNLAGRTECNVFDIVRGLKDL-EAPGSHQDAEVSRC 124
           SA+DTL ++ + Y+  +GK A  Y+NLAGR + N  DI++ L+DL    G    ++   C
Sbjct: 84  SALDTLTDVAVQYIQSIGKTAHLYANLAGRVDGNSLDILQALEDLGSGLGFAGVSDTDHC 143

Query: 125 LAGSRILQEIFEYANSVQEIPFAQPVPQFPIIKSCKVLPSFIQMRETPPSKHIPNWLPAF 172
           LA S ++++I  Y    +EIPF   +P+FP  K  K  PSF ++   PP +HIP WLPAF
Sbjct: 144 LADSGVVKDIIRYTGEAEEIPFVYSLPRFPFSKEKKPAPSFSEVGAEPPDEHIPVWLPAF 202

[Close]
BLAST of Clc04G09600 vs. TAIR 10
Match: AT1G31240.1 (Bromodomain transcription factor )

HSP 1 Score: 99.0 bits (245), Expect = 1.1e-20
Identity = 54/153 (35.29%), Postives = 86/153 (56.21%), Query Frame = 0 

Query: 26  DFGREVSKIAAAQICQSLGFQGSKESAMDTLAEIVIVYLSDLGKMASFYSNLAGRTECNV 85
           +F   ++KIA +QICQS+G++ +  SA++TL      +L  L ++AS +SN A RTE N+
Sbjct: 25  EFSFSLTKIAVSQICQSIGYKATDASALNTLTLTTTKFLQSLAELASSFSNTANRTEVNL 84

Query: 86  FDIVRGLKDLEA------PGSHQDAEV-SRCLAGSRILQEIFEYANSVQEIPFAQPVPQF 145
           FDIV GL+D+        PG     ++ S+CL  S +L+ + ++     EIPFA+P+P+ 
Sbjct: 85  FDIVNGLQDIALSTSDCFPGGSTVHDIESQCLIKSAVLRNLSDFVTYAPEIPFAKPLPRR 144

Query: 146 PIIKSCKVLPSFIQMRETPPSKHIPNWLPAFPD 172
               S       + +  +     +P WLP FPD
Sbjct: 145 ERDGSFGGDLDHVAVTRSVDVTSVPAWLPPFPD 177

The following BLAST results are available for this feature:
BLAST of Clc04G09600 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038882077.11.3e-19094.99transcription initiation factor TFIID subunit 8 [Benincasa hispida][more]
KAA0063816.13.7e-18893.33transcription initiation factor TFIID subunit 8-like [Cucumis melo var. makuwa] ... [more]
XP_008462468.12.4e-18793.06PREDICTED: transcription initiation factor TFIID subunit 8-like [Cucumis melo][more]
XP_011657663.13.1e-18793.89transcription initiation factor TFIID subunit 8 isoform X1 [Cucumis sativus][more]
XP_023544694.13.5e-18391.64transcription initiation factor TFIID subunit 8-like [Cucurbita pepo subsp. pepo... [more]
BLAST of Clc04G09600 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SYZ91.8e-7345.56Transcription initiation factor TFIID subunit 8 OS=Arabidopsis thaliana OX=3702 ... [more]
A7MAZ41.5e-1127.57Transcription initiation factor TFIID subunit 8 OS=Bos taurus OX=9913 GN=TAF8 PE... [more]
Q9EQH41.5e-1124.70Transcription initiation factor TFIID subunit 8 OS=Mus musculus OX=10090 GN=Taf8... [more]
Q7Z7C82.0e-1128.38Transcription initiation factor TFIID subunit 8 OS=Homo sapiens OX=9606 GN=TAF8 ... [more]
Q7ZYA22.2e-1026.67Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis OX=8355 GN=taf... [more]
BLAST of Clc04G09600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C8321.8e-18893.33Transcription initiation factor TFIID subunit 8 OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S3CH151.1e-18793.06Transcription initiation factor TFIID subunit 8 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0KF511.5e-18793.89Transcription initiation factor TFIID subunit 8 OS=Cucumis sativus OX=3659 GN=Cs... [more]
A0A6J1EGW41.5e-18291.09Transcription initiation factor TFIID subunit 8 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1IV184.2e-18291.09Transcription initiation factor TFIID subunit 8 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Clc04G09600 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G34340.11.3e-7445.56TBP-associated factor 8 [more]
AT5G15570.15.2e-3132.79Bromodomain transcription factor [more]
AT3G02160.13.1e-2836.26Bromodomain transcription factor [more]
AT1G31240.11.1e-2035.29Bromodomain transcription factor [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006565Bromodomain associated domainSMARTSM0057617neu3coord: 25..102
e-value: 3.1E-19
score: 79.9
IPR006565Bromodomain associated domainPFAMPF07524Bromo_TPcoord: 28..95
e-value: 2.7E-17
score: 62.6
IPR019473Transcription factor TFIID, subunit 8, C-terminalPFAMPF10406TAF8_Ccoord: 161..209
e-value: 1.0E-20
score: 74.0
IPR019473Transcription factor TFIID, subunit 8, C-terminalCDDcd08049TAF8coord: 161..213
e-value: 6.15875E-25
score: 95.0323
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 23..104
e-value: 6.5E-18
score: 66.2
NoneNo IPR availablePANTHERPTHR46338:SF1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8coord: 1..359
IPR037818Transcription initiation factor TFIID subunit 8PANTHERPTHR46338TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8coord: 1..359

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc04G09600.2Clc04G09600.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
cellular_component GO:0005669 transcription factor TFIID complex
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003743 translation initiation factor activity