Clc04G07990 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G07990
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	DEA(D/H)-box RNA helicase family protein
Location	ClcChr04: 21756437 .. 21758189 (+)
RNA-Seq Expression	Clc04G07990
Synteny	Clc04G07990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAGATGTCTCTCCGGCCCAAAATAACCATCCTCGCCACCCGATACCGCCATCACTGCAACCGTGAATATCTCGGCGCCTCCTCCTCCTCCACCAGTTCCACAGTTTTGCTGCTTTCATCAATCTGCTATTAAGGCTTTCTATTGCAACTTTGATTTCTTCAGCTTCAAAGTATCAACGAAGAAATGCCAATTCTCCCAATTTCCCTCCCGATTCCAATACCTCTTCGTCCGCCCTTATTCTCTTTCTCTCAGTCTCTAACTGGTTCAAATCACCTTTCTTACCTTCCCAATCGGATGCCGGTCGTTTCAAAGACGACAACGCTTATTCGAATGGGCGGAGGTCCTAGAACTTATCCAGGTGGAGTGTCGAAGTGGCAGTGGAAGCGGATGCAGGCCAAGAAAGCTAAGCAGCTGCTTAAGGCCCGGCTGTGCCGCGAACGCCAGATATATGAGATGCGTAAGCGGGCTGAACTTAAGGCAGCTGTCTCCGAGCTGGAGAGGCCGTGGGAGGTTGTGGAGAAGGCTCCTAATTTGTTCTCTGTTGGGGCCGATGAGCAGGTGAAGGTATTGGCAGATAGGTTTCAGAGGCCTGGTGGATTCGATTTATGGACGGAAAGAGATGGGCCTCAATTATTTGAGACAGTTGACGAACTACCTTCCACAAGGTTTTTCCCGAAAGGGGTGGTTCACAGTATAAGGCCATATAGAAGTATTGCTGGGTCGGAGAGTTCGGTGAGTATGGATTTAGAAGCTGGAAATGAAATTGCAACTAGTTTTCAAGATGATTTTAAGACTCACCGAAAGTCTTCTAACCGGAAATTGAGAAGTGGGTCAGTGAATAAAGGGGATGATAACTCAGATTACTCGGATTACCCAGAGTACTCGGATGCGGAGGATTCTTATCCGAAGAGTTCCCTGGTACCATCAAGTAGTCATGGTAAAAAGGGAAAGATAAACGAGGGTAGATCCAGGAATCGGGGGACTGAAAGAAACCTGAAGTCTTCTAAGAGAGAGTTGAATCCAGGAGAAAGTGGATTGGATAGAACACAAAGACTTCCTGGTCCTCGGGCGCACAATGGCAATACACAGTATGGAAGAGGTAAGGATTCCAGGCGATCGAGGGGTTCACATTCTGAAGTTTATGATATGAGTTTGGAGCAAGATGGGAGTTACAGATTCCAACCAATGAAAAGTGGTCAACCTGAATGATATGGCCTGAGTTAAATCTCGAGAGGAGTCATTTTAGTATTGCCATCATATTGGCTGAAGAAGGAAATTTCAACTTGACTATGTAGTAGAATTGCTGGAGCTGATCTGGAATGGCCACCCAGATGGTGTTTTTGGCTGATGATAATTCCCTCATAGGCTGGTTAGCTGAGTTGGATGCCTTTCAAGTATGTATGTTATACATTCTCAGTTCAGCATATCCTATGTACATGTGTAGTTTTTGAGATGACTTAAAAATACTTTATTGCATATACCCTGTATATGTCACTGTATAATGCACTAACTTATCAAGTCTTTTAGTTCTACCAAGTTACTCTACAATTTCTCGCTATCAACTTACTCATTTTCTGGTTGATCATTCTATGGATTTGGTTCTATCTACTACTTTGTATTGGTGCAAATCAAAGCACCCTTTTAAACACTAGAGTCTTTCTTATTTAGTTTCCATTTGGAAAACTCTTTTGTAATCACCTTTAAGTGGTTTGGGTTCTCCCCATTATTTCATTTATTCAATGAAATGTTTC

mRNA sequence

CGAAGATGTCTCTCCGGCCCAAAATAACCATCCTCGCCACCCGATACCGCCATCACTGCAACCGTGAATATCTCGGCGCCTCCTCCTCCTCCACCAGTTCCACAGTTTTGCTGCTTTCATCAATCTGCTATTAAGGCTTTCTATTGCAACTTTGATTTCTTCAGCTTCAAAGTATCAACGAAGAAATGCCAATTCTCCCAATTTCCCTCCCGATTCCAATACCTCTTCGTCCGCCCTTATTCTCTTTCTCTCAGTCTCTAACTGGTTCAAATCACCTTTCTTACCTTCCCAATCGGATGCCGGTCGTTTCAAAGACGACAACGCTTATTCGAATGGGCGGAGGTCCTAGAACTTATCCAGGTGGAGTGTCGAAGTGGCAGTGGAAGCGGATGCAGGCCAAGAAAGCTAAGCAGCTGCTTAAGGCCCGGCTGTGCCGCGAACGCCAGATATATGAGATGCGTAAGCGGGCTGAACTTAAGGCAGCTGTCTCCGAGCTGGAGAGGCCGTGGGAGGTTGTGGAGAAGGCTCCTAATTTGTTCTCTGTTGGGGCCGATGAGCAGGTGAAGGTATTGGCAGATAGGTTTCAGAGGCCTGGTGGATTCGATTTATGGACGGAAAGAGATGGGCCTCAATTATTTGAGACAGTTGACGAACTACCTTCCACAAGGTTTTTCCCGAAAGGGGTGGTTCACAGTATAAGGCCATATAGAAGTATTGCTGGGTCGGAGAGTTCGGTGAGTATGGATTTAGAAGCTGGAAATGAAATTGCAACTAGTTTTCAAGATGATTTTAAGACTCACCGAAAGTCTTCTAACCGGAAATTGAGAAGTGGGTCAGTGAATAAAGGGGATGATAACTCAGATTACTCGGATTACCCAGAGTACTCGGATGCGGAGGATTCTTATCCGAAGAGTTCCCTGGTACCATCAAGTAGTCATGGTAAAAAGGGAAAGATAAACGAGGGTAGATCCAGGAATCGGGGGACTGAAAGAAACCTGAAGTCTTCTAAGAGAGAGTTGAATCCAGGAGAAAGTGGATTGGATAGAACACAAAGACTTCCTGGTCCTCGGGCGCACAATGGCAATACACAGTATGGAAGAGGTAAGGATTCCAGGCGATCGAGGGGTTCACATTCTGAAGTTTATGATATGAGTTTGGAGCAAGATGGGAGTTACAGATTCCAACCAATGAAAAGTGGTCAACCTGAATGATATGGCCTGAGTTAAATCTCGAGAGGAGTCATTTTAGTATTGCCATCATATTGGCTGAAGAAGGAAATTTCAACTTGACTATGTAGTAGAATTGCTGGAGCTGATCTGGAATGGCCACCCAGATGGTGTTTTTGGCTGATGATAATTCCCTCATAGGCTGGTTAGCTGAGTTGGATGCCTTTCAAGTATGTATGTTATACATTCTCAGTTCAGCATATCCTATGTACATGTGTAGTTTTTGAGATGACTTAAAAATACTTTATTGCATATACCCTGTATATGTCACTGTATAATGCACTAACTTATCAAGTCTTTTAGTTCTACCAAGTTACTCTACAATTTCTCGCTATCAACTTACTCATTTTCTGGTTGATCATTCTATGGATTTGGTTCTATCTACTACTTTGTATTGGTGCAAATCAAAGCACCCTTTTAAACACTAGAGTCTTTCTTATTTAGTTTCCATTTGGAAAACTCTTTTGTAATCACCTTTAAGTGGTTTGGGTTCTCCCCATTATTTCATTTATTCAATGAAATGTTTC

Coding sequence (CDS)

ATGCCAATTCTCCCAATTTCCCTCCCGATTCCAATACCTCTTCGTCCGCCCTTATTCTCTTTCTCTCAGTCTCTAACTGGTTCAAATCACCTTTCTTACCTTCCCAATCGGATGCCGGTCGTTTCAAAGACGACAACGCTTATTCGAATGGGCGGAGGTCCTAGAACTTATCCAGGTGGAGTGTCGAAGTGGCAGTGGAAGCGGATGCAGGCCAAGAAAGCTAAGCAGCTGCTTAAGGCCCGGCTGTGCCGCGAACGCCAGATATATGAGATGCGTAAGCGGGCTGAACTTAAGGCAGCTGTCTCCGAGCTGGAGAGGCCGTGGGAGGTTGTGGAGAAGGCTCCTAATTTGTTCTCTGTTGGGGCCGATGAGCAGGTGAAGGTATTGGCAGATAGGTTTCAGAGGCCTGGTGGATTCGATTTATGGACGGAAAGAGATGGGCCTCAATTATTTGAGACAGTTGACGAACTACCTTCCACAAGGTTTTTCCCGAAAGGGGTGGTTCACAGTATAAGGCCATATAGAAGTATTGCTGGGTCGGAGAGTTCGGTGAGTATGGATTTAGAAGCTGGAAATGAAATTGCAACTAGTTTTCAAGATGATTTTAAGACTCACCGAAAGTCTTCTAACCGGAAATTGAGAAGTGGGTCAGTGAATAAAGGGGATGATAACTCAGATTACTCGGATTACCCAGAGTACTCGGATGCGGAGGATTCTTATCCGAAGAGTTCCCTGGTACCATCAAGTAGTCATGGTAAAAAGGGAAAGATAAACGAGGGTAGATCCAGGAATCGGGGGACTGAAAGAAACCTGAAGTCTTCTAAGAGAGAGTTGAATCCAGGAGAAAGTGGATTGGATAGAACACAAAGACTTCCTGGTCCTCGGGCGCACAATGGCAATACACAGTATGGAAGAGGTAAGGATTCCAGGCGATCGAGGGGTTCACATTCTGAAGTTTATGATATGAGTTTGGAGCAAGATGGGAGTTACAGATTCCAACCAATGAAAAGTGGTCAACCTGAATGA

Protein sequence

MPILPISLPIPIPLRPPLFSFSQSLTGSNHLSYLPNRMPVVSKTTTLIRMGGGPRTYPGGVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSVGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVVHSIRPYRSIAGSESSVSMDLEAGNEIATSFQDDFKTHRKSSNRKLRSGSVNKGDDNSDYSDYPEYSDAEDSYPKSSLVPSSSHGKKGKINEGRSRNRGTERNLKSSKRELNPGESGLDRTQRLPGPRAHNGNTQYGRGKDSRRSRGSHSEVYDMSLEQDGSYRFQPMKSGQPE

Homology

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BLAST of Clc04G07990 vs. NCBI nr
Match: XP_038883722.1 (uncharacterized protein LOC120074621 [Benincasa hispida] >XP_038883723.1 uncharacterized protein LOC120074621 [Benincasa hispida] >XP_038883724.1 uncharacterized protein LOC120074621 [Benincasa hispida] >XP_038883725.1 uncharacterized protein LOC120074621 [Benincasa hispida] >XP_038883726.1 uncharacterized protein LOC120074621 [Benincasa hispida])

HSP 1 Score: 564.3 bits (1453), Expect = 7.1e-157
Identity = 291/338 (86.09%), Postives = 311/338 (92.01%), Query Frame = 0


Query: 1   MPILPISLPIPIPLRPPLFSFSQSLTGSNHLSYLPNRMPVVSKTTTLIRMGGGPRTYPGG 60
           MPILPISL IP PLRPPLFSFSQSLTGSNHL Y PNRMP+VSK+TTLIRMGGGPRTYPGG
Sbjct: 1   MPILPISLAIPNPLRPPLFSFSQSLTGSNHLFYFPNRMPIVSKSTTLIRMGGGPRTYPGG 60

Query: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAV+ELERPWEVVE+APNLFSV
Sbjct: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVAELERPWEVVERAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVVHSIRPYRSIAGS 180
           GADEQVKVLADRFQRPGGFDLWTE+DGPQLF+TVDELPS RFFPKGVVHS+RPYRSI GS
Sbjct: 121 GADEQVKVLADRFQRPGGFDLWTEKDGPQLFQTVDELPSARFFPKGVVHSVRPYRSITGS 180

Query: 181 ESSVSMDLEAGNEIATSFQ-DDFKTHRKSSNRKLRSGSVNKGDDNSDYSDYPEYSDAEDS 240
           ESS+S+D EAGNEIATSFQ DDFKTHR+SSNRKLRS  VNKG+ N   SDYP+YS+ EDS
Sbjct: 181 ESSLSLDAEAGNEIATSFQEDDFKTHRRSSNRKLRSAPVNKGEVN---SDYPDYSNTEDS 240

Query: 241 YPKSSLVPSSSHGKKGKINEGRSRNRGTERNLKSSKRELNPGESGLDRTQRLPGPRAHNG 300
           YPK SLVPSSS+GK G + EG +RNRGTERNLKSSKRELNPG+ GLDR QR+PG +AHN 
Sbjct: 241 YPKRSLVPSSSNGKNGNVYEGGTRNRGTERNLKSSKRELNPGQIGLDRRQRVPGSQAHNS 300

Query: 301 NTQYGRGKDSRRSRGSHSEVYDMSLEQDGSYRFQPMKS 338
           NTQYGR KDSRRS+ SHSEVYDMSLE DGSYRFQPMKS
Sbjct: 301 NTQYGRRKDSRRSKSSHSEVYDMSLEHDGSYRFQPMKS 335

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BLAST of Clc04G07990 vs. NCBI nr
Match: XP_008448454.1 (PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_008448464.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_008448491.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_008448500.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_008448509.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_008448517.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_016900714.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_016900716.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_016900717.1 PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >KAA0045132.1 putative DEAD-box ATP-dependent RNA helicase 33 [Cucumis melo var. makuwa] >TYK23605.1 putative DEAD-box ATP-dependent RNA helicase 33 [Cucumis melo var. makuwa])

HSP 1 Score: 550.8 bits (1418), Expect = 8.1e-153
Identity = 288/338 (85.21%), Postives = 308/338 (91.12%), Query Frame = 0


Query: 1   MPILPISLPIPIPLRPPLFSFSQSLTGSNHLSYLPNRMPVVSKTTTLIRMGGGPRTYPGG 60
           MPIL  SLPI IPLRPPLFSFSQSLTGSNHLSYLPNRMP+V+KTTTLIRMGGGPRTYPGG
Sbjct: 1   MPILQTSLPISIPLRPPLFSFSQSLTGSNHLSYLPNRMPIVTKTTTLIRMGGGPRTYPGG 60

Query: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVVHSIRPYRSIAGS 180
           GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPS RFFPKGVVHS+RPYRSI  S
Sbjct: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITAS 180

Query: 181 ESSVSMDLEAGNEIATSFQDD-FKTHRKSSNRKLRSGSVNKGDDNSDYSDYPEYSDAEDS 240
           ESS+S+D E GNEIA SFQ+D F+THR+SSNRKLRS SV+K +DN++YSD   YSD E S
Sbjct: 181 ESSLSLDSEVGNEIAASFQEDNFRTHRRSSNRKLRSFSVDKEEDNTNYSD---YSDTEGS 240

Query: 241 YPKSSLVPSSSHGKKGKINEGRSRNRGTERNLKSSKRELNPGESGLDRTQRLPGPRAHNG 300
           YP+ S  PS+S+G KG I E R+RNR TERNLK SKR LNPG++GLDR QR+PG +AHNG
Sbjct: 241 YPRHSSAPSNSNGTKGNIYEERTRNRRTERNLKPSKRGLNPGKNGLDRRQRVPGFQAHNG 300

Query: 301 NTQYGRGKDSRRSRGSHSEVYDMSLEQDGSYRFQPMKS 338
           NTQYGRGKD RRSRGSHSEVYDMSLEQDGSYRFQPMKS
Sbjct: 301 NTQYGRGKDIRRSRGSHSEVYDMSLEQDGSYRFQPMKS 335

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BLAST of Clc04G07990 vs. NCBI nr
Match: XP_011653656.1 (uncharacterized protein LOC101220703 [Cucumis sativus] >KAE8649553.1 hypothetical protein Csa_018140 [Cucumis sativus])

HSP 1 Score: 534.3 bits (1375), Expect = 7.9e-148
Identity = 281/339 (82.89%), Postives = 303/339 (89.38%), Query Frame = 0


Query: 1   MPILPISLPIPIPLRPPLFSFSQSLTGSNHLSYLPNRMPVVSKTTTLIRMGGGPRTYPGG 60
           MPILPISL I IP RPPLFSFSQSLTGSNHLSYLPNRMP+++KTT LIRMGGGPRTYPGG
Sbjct: 1   MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG 60

Query: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKK KQLLKARLCRERQIYEMRKRAELKAAVS+LERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVVHSIRPYRSIAGS 180
           GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPS RFFPKGVVHS+RPYRSI GS
Sbjct: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS 180

Query: 181 ESSVSMDLEAGNEIATSFQDD-FKTHRKSSNRKLRSGSVNKGDDNSDYSDYPEYSDAEDS 240
           ESS+S+D EAGNEI T+FQ+D F+THR+SSNR LRS SV+KG+DN++      YSD E S
Sbjct: 181 ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTN------YSDTEGS 240

Query: 241 YPKSSLVPSSSHGKKGKI-NEGRSRNRGTERNLKSSKRELNPGESGLDRTQRLPGPRAHN 300
           YP+ S  PS S+G KG I  E R+RN  TERNLKSSKREL PG++GLDR QR+PGP+AHN
Sbjct: 241 YPRHSSAPSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHN 300

Query: 301 GNTQYGRGKDSRRSRGSHSEVYDMSLEQDGSYRFQPMKS 338
           GNTQYG GKD RRSRGSHSEVYDMSLEQDGSYRFQ MKS
Sbjct: 301 GNTQYGSGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMKS 333

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BLAST of Clc04G07990 vs. NCBI nr
Match: XP_022151570.1 (uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151571.1 uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151572.1 uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151573.1 uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151574.1 uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151575.1 uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151576.1 uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151577.1 uncharacterized protein LOC111019483 [Momordica charantia])

HSP 1 Score: 496.1 bits (1276), Expect = 2.4e-136
Identity = 261/342 (76.32%), Postives = 293/342 (85.67%), Query Frame = 0


Query: 1   MPILPISLPIPIPLRPPLFSFSQSLTGSNHLSYLPNRMPVVSKTTTLIRMGGGPRTYPGG 60
           MPI  ISL IP P RP LFSFSQSL G NHLSYLPNR+P+ ++ TTLIRMGGGPRT+PGG
Sbjct: 1   MPIFSISLAIPNPPRPLLFSFSQSLNGPNHLSYLPNRIPIATRITTLIRMGGGPRTFPGG 60

Query: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVVHSIRPYRSIAGS 180
            ADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPS RFFPKGVVHS++PYRSI GS
Sbjct: 121 SADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVKPYRSITGS 180

Query: 181 ESSVSMDLEAGNEIATSFQD-DFKTHRKSSNRKLRSGSVNKGDDNSDYSDYPEYSDAEDS 240
           E S+S+D EAGNEIAT F++ D++T+R+SSNR LRSGSV++G+D+         S+ EDS
Sbjct: 181 EDSLSLDSEAGNEIATGFREGDYETYRRSSNRILRSGSVSEGEDD---------SETEDS 240

Query: 241 YPKSSLVPSSSHGKKGKINEGRSRNRGTERNLKSSK----RELNPGESGLDRTQRLPGPR 300
           YP ++L PSSS+G KGK  +GR RNRG  RNL+SSK     + NPG+ GLDR +R+PGP+
Sbjct: 241 YPTNALAPSSSNGGKGKTYDGRFRNRGNGRNLESSKAFGSTKSNPGQIGLDRRKRIPGPQ 300

Query: 301 AHNGNTQYGRGKDSRRSRGSHSEVYDMSLEQDGSYRFQPMKS 338
            HNG+ QYGRGK SRRS  SHSEVYDM+LEQDGSYRFQPMKS
Sbjct: 301 VHNGSRQYGRGKGSRRSGSSHSEVYDMNLEQDGSYRFQPMKS 333

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BLAST of Clc04G07990 vs. NCBI nr
Match: XP_022966589.1 (uncharacterized protein LOC111466226 [Cucurbita maxima] >XP_022966590.1 uncharacterized protein LOC111466226 [Cucurbita maxima] >XP_022966591.1 uncharacterized protein LOC111466226 [Cucurbita maxima] >XP_022966592.1 uncharacterized protein LOC111466226 [Cucurbita maxima] >XP_022966593.1 uncharacterized protein LOC111466226 [Cucurbita maxima] >XP_022966594.1 uncharacterized protein LOC111466226 [Cucurbita maxima])

HSP 1 Score: 462.6 bits (1189), Expect = 2.9e-126
Identity = 267/422 (63.27%), Postives = 292/422 (69.19%), Query Frame = 0


Query: 1   MPILPISLPIPIPLR-PPLFSFSQSLTGSNHLSYLPNRMPVVSKTTTLIRMGGGPRTYPG 60
           MPI PISL I  P R PPLFSFSQS+TGSN L Y PN +   +K TTLIRMGGGPRTYPG
Sbjct: 1   MPIFPISLAISNPPRPPPLFSFSQSITGSNRLLYFPNGIRTATKITTLIRMGGGPRTYPG 60

Query: 61  GVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFS 120
           GVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFS
Sbjct: 61  GVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFS 120

Query: 121 VGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVVHSIRPYRSIAG 180
           VGADEQVKVLADRFQRPGGFDLWTE+DGPQLFETVDELPS RFFPKGVVHS++PYRSI G
Sbjct: 121 VGADEQVKVLADRFQRPGGFDLWTEKDGPQLFETVDELPSARFFPKGVVHSVKPYRSITG 180

Query: 181 SESSVSMDLEAGNEIATSFQ-DDFKTHRKSSNRKLRSGSVNKGDDNSDYSDYPEYSDAED 240
           SE S S+D E GNEI TSFQ DD KT R+SSNRKLR GSV++   NS+YSDY        
Sbjct: 181 SEGSSSLDSEDGNEIGTSFQEDDLKTPRRSSNRKLRIGSVSEEKANSNYSDY-------- 240

Query: 241 SYPKSSLVPSSSHGKKGKINEGRSRNR---------------GTE--------------- 300
            YP+SS VPSSS+G+KGK  EG+ RNR               G+E               
Sbjct: 241 -YPRSSSVPSSSNGQKGKTYEGKFRNREKGRNLQSSKRSSSLGSEAGNGIETRFQVDDFK 300

Query: 301 -----------------------------------------------------RNLKSSK 338
                                                                RNL+SSK
Sbjct: 301 TYRRSSNRKLRSGSVSEGEANSDYSDTEDYYLKSSMVPSSSNNGRKFGSRENGRNLESSK 360

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BLAST of Clc04G07990 vs. ExPASy Swiss-Prot
Match: O80792 (Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis thaliana OX=3702 GN=RH33 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 5.9e-13
Identity = 73/239 (30.54%), Postives = 107/239 (44.77%), Query Frame = 0


Query: 50  MGGGPRTYPGGVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWE 109
           MGGGPRT+PGG++KWQWKRM  KKA++     L +E+Q+YE R R E++A +       E
Sbjct: 76  MGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRAKMWGHPDSGE 135

Query: 110 VVEKAPNLFS-VGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVV 169
              K       +   E +K LADRF + G  DLW + DGP            + F +G  
Sbjct: 136 KTAKLKQSHGPMSPKEHIKTLADRFMKAGADDLWNDNDGP-----------VKKFDQG-- 195

Query: 170 HSIRPYRSIAGSESSVSMDLEAGNEIATSFQDDFKTHRKSSNRKLRSGSVNKGDDNSDYS 229
                 RS + S  S  +D+     + ++  D    HR   + +    S+++   N    
Sbjct: 196 -----SRSCSDSIDSTPIDV---RRLVSATCDSMGKHRVLDSSRRGFSSMSRFKRNESSC 255

Query: 230 DYPEYSDAEDSYPKSSLVPSSSHGKKGKINEGRS-----RNRGTERNLKSSKRELNPGE 283
           D  +  DA+     S   P  S G K K+    S     RN+G     K  K + +  E
Sbjct: 256 DEGDDVDAKKLDTLSPFSPKFS-GTKEKVKSSTSVVGVIRNKGLFGRRKFRKNDSSTEE 292

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BLAST of Clc04G07990 vs. ExPASy Swiss-Prot
Match: Q9C8S9 (Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana OX=3702 GN=RH48 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.8e-12
Identity = 72/239 (30.13%), Postives = 105/239 (43.93%), Query Frame = 0


Query: 50  MGGGPRTYPGGVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWE 109
           MGGGPRT+PGG++KWQWKRM  KKA++     L +E+Q+YE R R E++A +       E
Sbjct: 26  MGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRAKMWGNPDSGE 85

Query: 110 VVEKAPNLFS-VGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVV 169
              K+      +   E +K LADRF + G  D W E DGP                  V 
Sbjct: 86  KTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDFWNENDGP------------------VK 145

Query: 170 HSIRPYRSIAGSESSVSMDLEAGNEIATSFQDDFKTHRKSSNRKLRSGSVNKGDDNSDYS 229
            S +  RS + S  S S        + ++  D    +R   + +    S+++   N    
Sbjct: 146 KSDQGSRSGSDSIDSTSNSPIDVRRLVSATCDSMGKNRVFGSSRRGFSSMSRFKRNESSC 205

Query: 230 DYPEYSDAEDSYPKSSLVPSSSHGKKGKINEGRS-----RNRGTERNLKSSKRELNPGE 283
           D  +  DA+     S   P  + G K K+   RS     RN+G     K  K + +  E
Sbjct: 206 DEGDDFDAKKLDTLSPFSPKFA-GTKEKVKSSRSVVGVIRNKGLFGRRKFRKNDSSTEE 245

[Close]

BLAST of Clc04G07990 vs. ExPASy Swiss-Prot
Match: Q6K7R9 (DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0826100 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-11
Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 0


Query: 50  MGGGPRTYPGGVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWE 109
           MGGGPRT+PGG+SKWQ KRM  K A+   +  L  E+Q+Y  R R+E++A+         
Sbjct: 1   MGGGPRTFPGGLSKWQHKRMHEKLARHKERGLLRHEKQLYLARLRSEIRAS--------- 60

Query: 110 VVEKAPNLFSVGADE---------QVKVLADRFQRPGGFDLWTERDGP 149
              + P   +   D+          ++ LADRF  PG  DLW E DGP
Sbjct: 61  ---RLPAAGASPPDDGDGPTSSRAHIRALADRFLLPGAEDLWNEDDGP 96

[Close]

BLAST of Clc04G07990 vs. ExPASy TrEMBL
Match: A0A1S3BKN8 (uncharacterized protein LOC103490641 OS=Cucumis melo OX=3656 GN=LOC103490641 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 3.9e-153
Identity = 288/338 (85.21%), Postives = 308/338 (91.12%), Query Frame = 0


Query: 1   MPILPISLPIPIPLRPPLFSFSQSLTGSNHLSYLPNRMPVVSKTTTLIRMGGGPRTYPGG 60
           MPIL  SLPI IPLRPPLFSFSQSLTGSNHLSYLPNRMP+V+KTTTLIRMGGGPRTYPGG
Sbjct: 1   MPILQTSLPISIPLRPPLFSFSQSLTGSNHLSYLPNRMPIVTKTTTLIRMGGGPRTYPGG 60

Query: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVVHSIRPYRSIAGS 180
           GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPS RFFPKGVVHS+RPYRSI  S
Sbjct: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITAS 180

Query: 181 ESSVSMDLEAGNEIATSFQDD-FKTHRKSSNRKLRSGSVNKGDDNSDYSDYPEYSDAEDS 240
           ESS+S+D E GNEIA SFQ+D F+THR+SSNRKLRS SV+K +DN++YSD   YSD E S
Sbjct: 181 ESSLSLDSEVGNEIAASFQEDNFRTHRRSSNRKLRSFSVDKEEDNTNYSD---YSDTEGS 240

Query: 241 YPKSSLVPSSSHGKKGKINEGRSRNRGTERNLKSSKRELNPGESGLDRTQRLPGPRAHNG 300
           YP+ S  PS+S+G KG I E R+RNR TERNLK SKR LNPG++GLDR QR+PG +AHNG
Sbjct: 241 YPRHSSAPSNSNGTKGNIYEERTRNRRTERNLKPSKRGLNPGKNGLDRRQRVPGFQAHNG 300

Query: 301 NTQYGRGKDSRRSRGSHSEVYDMSLEQDGSYRFQPMKS 338
           NTQYGRGKD RRSRGSHSEVYDMSLEQDGSYRFQPMKS
Sbjct: 301 NTQYGRGKDIRRSRGSHSEVYDMSLEQDGSYRFQPMKS 335

[Close]

BLAST of Clc04G07990 vs. ExPASy TrEMBL
Match: A0A5A7TP38 (Putative DEAD-box ATP-dependent RNA helicase 33 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001170 PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 3.9e-153
Identity = 288/338 (85.21%), Postives = 308/338 (91.12%), Query Frame = 0


Query: 1   MPILPISLPIPIPLRPPLFSFSQSLTGSNHLSYLPNRMPVVSKTTTLIRMGGGPRTYPGG 60
           MPIL  SLPI IPLRPPLFSFSQSLTGSNHLSYLPNRMP+V+KTTTLIRMGGGPRTYPGG
Sbjct: 1   MPILQTSLPISIPLRPPLFSFSQSLTGSNHLSYLPNRMPIVTKTTTLIRMGGGPRTYPGG 60

Query: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVVHSIRPYRSIAGS 180
           GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPS RFFPKGVVHS+RPYRSI  S
Sbjct: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITAS 180

Query: 181 ESSVSMDLEAGNEIATSFQDD-FKTHRKSSNRKLRSGSVNKGDDNSDYSDYPEYSDAEDS 240
           ESS+S+D E GNEIA SFQ+D F+THR+SSNRKLRS SV+K +DN++YSD   YSD E S
Sbjct: 181 ESSLSLDSEVGNEIAASFQEDNFRTHRRSSNRKLRSFSVDKEEDNTNYSD---YSDTEGS 240

Query: 241 YPKSSLVPSSSHGKKGKINEGRSRNRGTERNLKSSKRELNPGESGLDRTQRLPGPRAHNG 300
           YP+ S  PS+S+G KG I E R+RNR TERNLK SKR LNPG++GLDR QR+PG +AHNG
Sbjct: 241 YPRHSSAPSNSNGTKGNIYEERTRNRRTERNLKPSKRGLNPGKNGLDRRQRVPGFQAHNG 300

Query: 301 NTQYGRGKDSRRSRGSHSEVYDMSLEQDGSYRFQPMKS 338
           NTQYGRGKD RRSRGSHSEVYDMSLEQDGSYRFQPMKS
Sbjct: 301 NTQYGRGKDIRRSRGSHSEVYDMSLEQDGSYRFQPMKS 335

[Close]

BLAST of Clc04G07990 vs. ExPASy TrEMBL
Match: A0A0A0L2E2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303050 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 1.1e-147
Identity = 280/338 (82.84%), Postives = 302/338 (89.35%), Query Frame = 0


Query: 1   MPILPISLPIPIPLRPPLFSFSQSLTGSNHLSYLPNRMPVVSKTTTLIRMGGGPRTYPGG 60
           MPILPISL I IP RPPLFSFSQSLTGSNHLSYLPNRMP+++KTT LIRMGGGPRTYPGG
Sbjct: 1   MPILPISLAISIPSRPPLFSFSQSLTGSNHLSYLPNRMPILTKTTPLIRMGGGPRTYPGG 60

Query: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKK KQLLKARLCRERQIYEMRKRAELKAAVS+LERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKGKQLLKARLCRERQIYEMRKRAELKAAVSQLERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVVHSIRPYRSIAGS 180
           GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPS RFFPKGVVHS+RPYRSI GS
Sbjct: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVRPYRSITGS 180

Query: 181 ESSVSMDLEAGNEIATSFQDD-FKTHRKSSNRKLRSGSVNKGDDNSDYSDYPEYSDAEDS 240
           ESS+S+D EAGNEI T+FQ+D F+THR+SSNR LRS SV+KG+DN++      YSD E S
Sbjct: 181 ESSLSLDSEAGNEIPTTFQEDNFRTHRRSSNRTLRSFSVDKGEDNTN------YSDTEGS 240

Query: 241 YPKSSLVPSSSHGKKGKI-NEGRSRNRGTERNLKSSKRELNPGESGLDRTQRLPGPRAHN 300
           YP+ S  PS S+G KG I  E R+RN  TERNLKSSKREL PG++GLDR QR+PGP+AHN
Sbjct: 241 YPRHSSAPSISNGTKGNIYEERRTRNGRTERNLKSSKRELKPGKNGLDRRQRVPGPQAHN 300

Query: 301 GNTQYGRGKDSRRSRGSHSEVYDMSLEQDGSYRFQPMK 337
           GNTQYG GKD RRSRGSHSEVYDMSLEQDGSYRFQ MK
Sbjct: 301 GNTQYGSGKDFRRSRGSHSEVYDMSLEQDGSYRFQSMK 332

[Close]

BLAST of Clc04G07990 vs. ExPASy TrEMBL
Match: A0A6J1DBJ9 (uncharacterized protein LOC111019483 OS=Momordica charantia OX=3673 GN=LOC111019483 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 1.2e-136
Identity = 261/342 (76.32%), Postives = 293/342 (85.67%), Query Frame = 0


Query: 1   MPILPISLPIPIPLRPPLFSFSQSLTGSNHLSYLPNRMPVVSKTTTLIRMGGGPRTYPGG 60
           MPI  ISL IP P RP LFSFSQSL G NHLSYLPNR+P+ ++ TTLIRMGGGPRT+PGG
Sbjct: 1   MPIFSISLAIPNPPRPLLFSFSQSLNGPNHLSYLPNRIPIATRITTLIRMGGGPRTFPGG 60

Query: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120
           VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV
Sbjct: 61  VSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFSV 120

Query: 121 GADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVVHSIRPYRSIAGS 180
            ADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPS RFFPKGVVHS++PYRSI GS
Sbjct: 121 SADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSARFFPKGVVHSVKPYRSITGS 180

Query: 181 ESSVSMDLEAGNEIATSFQD-DFKTHRKSSNRKLRSGSVNKGDDNSDYSDYPEYSDAEDS 240
           E S+S+D EAGNEIAT F++ D++T+R+SSNR LRSGSV++G+D+         S+ EDS
Sbjct: 181 EDSLSLDSEAGNEIATGFREGDYETYRRSSNRILRSGSVSEGEDD---------SETEDS 240

Query: 241 YPKSSLVPSSSHGKKGKINEGRSRNRGTERNLKSSK----RELNPGESGLDRTQRLPGPR 300
           YP ++L PSSS+G KGK  +GR RNRG  RNL+SSK     + NPG+ GLDR +R+PGP+
Sbjct: 241 YPTNALAPSSSNGGKGKTYDGRFRNRGNGRNLESSKAFGSTKSNPGQIGLDRRKRIPGPQ 300

Query: 301 AHNGNTQYGRGKDSRRSRGSHSEVYDMSLEQDGSYRFQPMKS 338
            HNG+ QYGRGK SRRS  SHSEVYDM+LEQDGSYRFQPMKS
Sbjct: 301 VHNGSRQYGRGKGSRRSGSSHSEVYDMNLEQDGSYRFQPMKS 333

[Close]

BLAST of Clc04G07990 vs. ExPASy TrEMBL
Match: A0A6J1HU81 (uncharacterized protein LOC111466226 OS=Cucurbita maxima OX=3661 GN=LOC111466226 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.4e-126
Identity = 267/422 (63.27%), Postives = 292/422 (69.19%), Query Frame = 0


Query: 1   MPILPISLPIPIPLR-PPLFSFSQSLTGSNHLSYLPNRMPVVSKTTTLIRMGGGPRTYPG 60
           MPI PISL I  P R PPLFSFSQS+TGSN L Y PN +   +K TTLIRMGGGPRTYPG
Sbjct: 1   MPIFPISLAISNPPRPPPLFSFSQSITGSNRLLYFPNGIRTATKITTLIRMGGGPRTYPG 60

Query: 61  GVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFS 120
           GVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFS
Sbjct: 61  GVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWEVVEKAPNLFS 120

Query: 121 VGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVVHSIRPYRSIAG 180
           VGADEQVKVLADRFQRPGGFDLWTE+DGPQLFETVDELPS RFFPKGVVHS++PYRSI G
Sbjct: 121 VGADEQVKVLADRFQRPGGFDLWTEKDGPQLFETVDELPSARFFPKGVVHSVKPYRSITG 180

Query: 181 SESSVSMDLEAGNEIATSFQ-DDFKTHRKSSNRKLRSGSVNKGDDNSDYSDYPEYSDAED 240
           SE S S+D E GNEI TSFQ DD KT R+SSNRKLR GSV++   NS+YSDY        
Sbjct: 181 SEGSSSLDSEDGNEIGTSFQEDDLKTPRRSSNRKLRIGSVSEEKANSNYSDY-------- 240

Query: 241 SYPKSSLVPSSSHGKKGKINEGRSRNR---------------GTE--------------- 300
            YP+SS VPSSS+G+KGK  EG+ RNR               G+E               
Sbjct: 241 -YPRSSSVPSSSNGQKGKTYEGKFRNREKGRNLQSSKRSSSLGSEAGNGIETRFQVDDFK 300

Query: 301 -----------------------------------------------------RNLKSSK 338
                                                                RNL+SSK
Sbjct: 301 TYRRSSNRKLRSGSVSEGEANSDYSDTEDYYLKSSMVPSSSNNGRKFGSRENGRNLESSK 360

[Close]

BLAST of Clc04G07990 vs. TAIR 10
Match: AT2G37920.1 (copper ion transmembrane transporters )

HSP 1 Score: 243.0 bits (619), Expect = 3.4e-64
Identity = 128/186 (68.82%), Postives = 145/186 (77.96%), Query Frame = 0


Query: 39  PVVSKTTTLIRMGGGPRTYPGGVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELK 98
           P   + +T+IRMGGGPRT+PGGVSKWQWKRMQAKK KQLLKARLCRERQIYEMRKRAELK
Sbjct: 39  PTQPRKSTVIRMGGGPRTFPGGVSKWQWKRMQAKKQKQLLKARLCRERQIYEMRKRAELK 98

Query: 99  AAVSELERPWEVVEKAPNLFSVGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELP 158
           AAV+ELERPWE + K PNLFSV ADEQVKVLADRFQ+PGGFDLWT+RDGPQLFE+VD+LP
Sbjct: 99  AAVAELERPWEPIHKPPNLFSVCADEQVKVLADRFQKPGGFDLWTDRDGPQLFESVDDLP 158

Query: 159 STRFFPKGVVHSIRPYRSIAGSESSVSMDLEAGNEIATSFQDDFKTHRKSSNRKLRSGSV 218
           S RFFPKGVVHS++PY  +  S SSV  D            D+ +   +   +KLR   V
Sbjct: 159 SARFFPKGVVHSVKPYGRL--SSSSVVDD-----------GDESEVKDEEIGKKLRGRRV 211

Query: 219 NK-GDD 224
            K GDD
Sbjct: 219 RKRGDD 211

[Close]

BLAST of Clc04G07990 vs. TAIR 10
Match: AT2G07750.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 76.6 bits (187), Expect = 4.2e-14
Identity = 73/239 (30.54%), Postives = 107/239 (44.77%), Query Frame = 0


Query: 50  MGGGPRTYPGGVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWE 109
           MGGGPRT+PGG++KWQWKRM  KKA++     L +E+Q+YE R R E++A +       E
Sbjct: 76  MGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRAKMWGHPDSGE 135

Query: 110 VVEKAPNLFS-VGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVV 169
              K       +   E +K LADRF + G  DLW + DGP            + F +G  
Sbjct: 136 KTAKLKQSHGPMSPKEHIKTLADRFMKAGADDLWNDNDGP-----------VKKFDQG-- 195

Query: 170 HSIRPYRSIAGSESSVSMDLEAGNEIATSFQDDFKTHRKSSNRKLRSGSVNKGDDNSDYS 229
                 RS + S  S  +D+     + ++  D    HR   + +    S+++   N    
Sbjct: 196 -----SRSCSDSIDSTPIDV---RRLVSATCDSMGKHRVLDSSRRGFSSMSRFKRNESSC 255

Query: 230 DYPEYSDAEDSYPKSSLVPSSSHGKKGKINEGRS-----RNRGTERNLKSSKRELNPGE 283
           D  +  DA+     S   P  S G K K+    S     RN+G     K  K + +  E
Sbjct: 256 DEGDDVDAKKLDTLSPFSPKFS-GTKEKVKSSTSVVGVIRNKGLFGRRKFRKNDSSTEE 292

[Close]

BLAST of Clc04G07990 vs. TAIR 10
Match: AT1G63250.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.7e-13
Identity = 72/239 (30.13%), Postives = 105/239 (43.93%), Query Frame = 0


Query: 50  MGGGPRTYPGGVSKWQWKRMQAKKAKQLLKARLCRERQIYEMRKRAELKAAVSELERPWE 109
           MGGGPRT+PGG++KWQWKRM  KKA++     L +E+Q+YE R R E++A +       E
Sbjct: 26  MGGGPRTFPGGLNKWQWKRMHEKKAREKENKLLDQEKQLYEARIRTEIRAKMWGNPDSGE 85

Query: 110 VVEKAPNLFS-VGADEQVKVLADRFQRPGGFDLWTERDGPQLFETVDELPSTRFFPKGVV 169
              K+      +   E +K LADRF + G  D W E DGP                  V 
Sbjct: 86  KTAKSKQSHGPMSPKEHIKTLADRFMKAGAEDFWNENDGP------------------VK 145

Query: 170 HSIRPYRSIAGSESSVSMDLEAGNEIATSFQDDFKTHRKSSNRKLRSGSVNKGDDNSDYS 229
            S +  RS + S  S S        + ++  D    +R   + +    S+++   N    
Sbjct: 146 KSDQGSRSGSDSIDSTSNSPIDVRRLVSATCDSMGKNRVFGSSRRGFSSMSRFKRNESSC 205

Query: 230 DYPEYSDAEDSYPKSSLVPSSSHGKKGKINEGRS-----RNRGTERNLKSSKRELNPGE 283
           D  +  DA+     S   P  + G K K+   RS     RN+G     K  K + +  E
Sbjct: 206 DEGDDFDAKKLDTLSPFSPKFA-GTKEKVKSSRSVVGVIRNKGLFGRRKFRKNDSSTEE 245

The following BLAST results are available for this feature:

BLAST of Clc04G07990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883722.1	7.1e-157	86.09	uncharacterized protein LOC120074621 [Benincasa hispida] >XP_038883723.1 unchara...	[more]
XP_008448454.1	8.1e-153	85.21	PREDICTED: uncharacterized protein LOC103490641 [Cucumis melo] >XP_008448464.1 P...	[more]
XP_011653656.1	7.9e-148	82.89	uncharacterized protein LOC101220703 [Cucumis sativus] >KAE8649553.1 hypothetica...	[more]
XP_022151570.1	2.4e-136	76.32	uncharacterized protein LOC111019483 [Momordica charantia] >XP_022151571.1 uncha...	[more]
XP_022966589.1	2.9e-126	63.27	uncharacterized protein LOC111466226 [Cucurbita maxima] >XP_022966590.1 uncharac...	[more]

BLAST of Clc04G07990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80792	5.9e-13	30.54	Putative DEAD-box ATP-dependent RNA helicase 33 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9C8S9	3.8e-12	30.13	Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6K7R9	1.1e-11	39.81	DEAD-box ATP-dependent RNA helicase 48 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Clc04G07990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BKN8	3.9e-153	85.21	uncharacterized protein LOC103490641 OS=Cucumis melo OX=3656 GN=LOC103490641 PE=...	[more]
A0A5A7TP38	3.9e-153	85.21	Putative DEAD-box ATP-dependent RNA helicase 33 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0L2E2	1.1e-147	82.84	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303050 PE=4 SV=1	[more]
A0A6J1DBJ9	1.2e-136	76.32	uncharacterized protein LOC111019483 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1HU81	1.4e-126	63.27	uncharacterized protein LOC111466226 OS=Cucurbita maxima OX=3661 GN=LOC111466226...	[more]

BLAST of Clc04G07990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37920.1	3.4e-64	68.82	copper ion transmembrane transporters	[more]
AT2G07750.1	4.2e-14	30.54	DEA(D/H)-box RNA helicase family protein	[more]
AT1G63250.1	2.7e-13	30.13	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..320
None	No IPR available	PANTHER	PTHR37724	OS02G0564300 PROTEIN	coord: 1..336
None	No IPR available	PANTHER	PTHR37724:SF1	OS02G0564300 PROTEIN	coord: 1..336

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G07990.1	Clc04G07990.1	mRNA