Clc04G06340 (gene) Watermelon (cordophanus) v2

Overview
NameClc04G06340
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionE3 ubiquitin-protein ligase
LocationClcChr04: 19527316 .. 19531262 (+)
RNA-Seq ExpressionClc04G06340
SyntenyClc04G06340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCGCTTTCTTCACCGGCGCCTTTTCCCTCTCTCTCCGACCACCTCCGCCGGCGCTCCGATCAATCACTCTCCCTCTCTCTCTTCGTCGGGTTTGGCTTTTCATGGACGACGGCCGACCATCGAGCACTGGTTTCTTGTCCTGGCAGCGAACCATGAGCTCGAGATTCGCGCTTCCGTTGATTCAAGACGCCGCGAATTTGATCATGGAACATCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGAGGAAGACGATAATGAATACGACCGTCGGGTTCTATTCCGGAATGGTTCTTCCTTCATCAAGCCTATTTTGGTACTCGACTTGTTTTGGAATTTGTTCTTCATTATTCTGTCTGTGATAGTGCTGGTATTGTCTGCTGAAGAGAAACCTACTGCTCCTTTGAGATTCTGGCTTTCCGGTTATGCTGTCCAGTGCCTTTTCCATGTCTTTTTTGTGTTCTTTGCTTACTTGAGAAGGAGTAATCGCTATCGATTTGGGTTTGAGAATCGTGGGGCTCAGGATGAATTTCGCCTTTCTCATAATCGTATAAGGTAACTTCTGTTTTGCGCAAAAGTTTGTTGGGGGTGGTTTTTGGTTTGAATTAGTTTCTCTTTTCTGTCTAATTGTAGATTGTAGATTGTATTTCGGTTTTCCGACGAATTTACTCATTGGGTTCTTAGAATGATGGTGGTGTCAAGATTTTCTACTAGTTTGTGGCGATTTTTATCAAATAGCTTATGATCAGTATAATTAACATCCCATTTATTATTTCTTTCATGTCCTTCCTTCATGGTTTTTAGAAAAGCGAGGGGGGGGGGGGGGGGGGGAAGAAGAAGAAAGAAACTACTCAAGTTGTTGGAATGGTGGTTACATCTTTCCATATGGGTTCTAGATCTTTCTTAATTGGTTGATTGATTATCTTGTGGTTTTCTTTTAGATGTTACGCTAACTTGATAAATGGAGTTCTGCTAGTTAATTTTAAGGGATTCTATATTTTGACAATCTGTTGAATTGAGTATTCTTTTCCATGTCAAATCATAAATAGTATTTTTAGAATGTAGGAAAGTTTTGGCATCTAATGCAAAATTGTTGTTGAATTCAACCATTATTAATAAGGGTGAACTTAGTGACAATGAAAAATTTGATAGTATAGTTATGGTTCTTGTAGAAAAAACAGGTTTTGCTTTTAAAGTAGATACTATGCGCAGTATACCTATAATTTATATTTGGAATGTAGTTTTGTCCTCTCATCCAAAGAATCTAGGATTTATTATAGATGGTAATGAACTTGATTATATATGGTAAGAAACTATGTGTCACCTGTAGGTGCTTTGGGTTTTCCCTTATTTCATTCATTCAAAGAAATGTTTCTTATCTAAAAAGTATGTATGGTAATGAACTTGTTTAGGAATTTTCATTTCATTTATGGTAACAAATTGTCTTCTTGTTTTTCGATTTAAAATGTATCGGATTAGGTTTTTGGTTTCCATGTCTCTGAGGATTTTACACTTATTAGCAGGAATTTATTTCCAGTCAAGAGATTTGCATGTTTGCTTACTTTTCTTCTTGTGACATTTTACATATGGATGTTTCAGCAATCTTTCTATTTCCTATATGGTTCAACTCTCTTTTTACCCCTCTGTTTTTTTTTCCCTAGAGTTATGAAAAGATTGGAAGCACTGAACACAATGATAGCATATATCTGGTGGGTATTTGGATTCTATTGGATAGTCATGGGTGGTCAAGCTCTTCTGGAAGGTTCTCCTCGACTCTACTGGTAAATACCCTCTCCTAGGGTCTTCAAACCCTTTGCTTTCTCTAGCTAACGACGTCTGTGGTTTCTCAGCAACTTAGTAGGATGTGGATGTAATTCAGAATGTGCATTATAAATTCCAGTTTGCTTGAAACGTATTCACTCTCCATCACTAGCTACTGCAGCTTCTAAAATTCAATTGGATTTACTAGTTTTCTCAAATTATTTCGTGATGATAAATAATGCCTTTCATTGTGATCTCAACTCTTATATAACTTTTGTAAATGTGCGAGTGAAAACTATCATTATTTTGTGATAATTGTGCTCTTTTTTCTCTAACTCCTGTCACCACTGAGAAGGGTATTCAGGTTGTGTTTTCATATTATTTTTCAGTTACTTTCAGTCTTCTTGTGGACCTGTGGTTATATCTCCCGTAGGTTCTGTATTGTTTGTTGCTGATAGCCTTTTGTTTATGTTGTTGTTATCGTTTTAATGTTATTTTCGTGTGTGAAAACTTCTTGTTTGACTTGATGGAAGCCGAGTATGAGGCTTGACTGATGGACTCATGGTATTAAATGCAGGTTGGCAGTTGTTTTCCTAGCCTTTGATGTGTTCTTTATTATCTTTTGCACTGGGATGGCATTTGTTGGTTTCTTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGACTTTCCTAGAAGGTGCCTCTGAAGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTTGTTCGACAGTGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAGTAATGGTCATACAACTGAACACACTCTAAATCCAGAGGACTCAGTGAGCAACAATCTTATTTTTACTTTCATTCTATTTTCATCTATTATGAAACCAACGTGGTAAATGAAAAATTTTCCTGTGTCAAATATTTTGCAAAGGTATAATTTATTAGCACCATTTCTACTTAAGAATCATGGACACTCTAATTTGGCTAGTTTGTCCTAACCGACATGTGTTCGTCACTTATTAGACACGTATCAGACACTTGTTTGTGTGATAGATGCGTTAGCACTAGTTCAAAGTCAAAGCAGGTTCAATATTTGTTAGCCATGCATCAAAAATACATCAAACTAATTTTTTAACATATAAATGCATAAACTCATTTACCTTAGAATTTCTTCTTGTATAAAAATTATATATTTTTTTAATGTATATTTTTATCGTGTCCTTATTGGGTATGTGTCCTAGATTTTAAAAATATGGCGTGTCATCGTGTCGTTTTTTGTCTCGTATTTGTATTTGTGCTTCTTAGGTTTTTTTGCCTCACCTTGAAAGAGTTCCCTATCTTCAAACTCATAAAATAGACATCTTGTATCATTATTTCAACAAATTTTTCCTATTTTTACATTTATGCCTATCAACCTCTAAATTATTATCATGCATATAGGATTTTCTAATATATACACATAGATAGATCTTTTAATGAAACAAGATATCCTGGTTACTGTTAAAAGATATTTCCTCCATGGAGTTTTTTCTTTTGAAAATGCTTTTTCTGACAAACCATGGGTTAGCCTAGTGGTTAAAAAATGAGACATAGTTTTAAAAAGGCTAAGAAGTCATGGGTTCAATCCATGTTGGACACTTACCTAGGATTTAATATCCTACGAGTTTCTTTGACACCCAAATGTTGTAGGGTCAGCGGGTTGAAAAATGCTTTATCTGACACAAACTGTGTCATGATTCCTTGTTTCCATACCTTTTTTTTTCTTCATTGTGCCTTTGTTGTACCCTTGTAGGACTCTTTGCTGTTTGATTAACTCTATGGTATTATATTTGTAGGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTTCAACTGTGCATGCTTCCCTGTAATCATCATTTCCATACTCGATGCATCGTCAAATGGCTTCGAATAAACGCAACCTGCCCCCTCTGCAAGTTCAGCATCGGACAAGGTGATTCCTTGGTCTGATTCATCTTTTCAATCGAGTCAGAGCATTCTTGAGGCTGAGACGAGATCTCTAACAAGTAACATGCAAAAGGAAACACACACAGGTCACATGCATCATCTCTTAACATATGTTGATTTGAGATTGAGAATGGGG

mRNA sequence

CTCGCTTTCTTCACCGGCGCCTTTTCCCTCTCTCTCCGACCACCTCCGCCGGCGCTCCGATCAATCACTCTCCCTCTCTCTCTTCGTCGGGTTTGGCTTTTCATGGACGACGGCCGACCATCGAGCACTGGTTTCTTGTCCTGGCAGCGAACCATGAGCTCGAGATTCGCGCTTCCGTTGATTCAAGACGCCGCGAATTTGATCATGGAACATCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGAGGAAGACGATAATGAATACGACCGTCGGGTTCTATTCCGGAATGGTTCTTCCTTCATCAAGCCTATTTTGGTACTCGACTTGTTTTGGAATTTGTTCTTCATTATTCTGTCTGTGATAGTGCTGGTATTGTCTGCTGAAGAGAAACCTACTGCTCCTTTGAGATTCTGGCTTTCCGGTTATGCTGTCCAGTGCCTTTTCCATGTCTTTTTTGTGTTCTTTGCTTACTTGAGAAGGAGTAATCGCTATCGATTTGGGTTTGAGAATCGTGGGGCTCAGGATGAATTTCGCCTTTCTCATAATCGTATAAGAGTTATGAAAAGATTGGAAGCACTGAACACAATGATAGCATATATCTGGTGGGTATTTGGATTCTATTGGATAGTCATGGGTGGTCAAGCTCTTCTGGAAGGTTCTCCTCGACTCTACTGTTACTTTCAGTCTTCTTGTGGACCTGTGGTTATATCTCCCGTAGGTTCTGTATTGTTTGTTGCTGATAGCCTTTTGTTTATGTTGGCAGTTGTTTTCCTAGCCTTTGATGTGTTCTTTATTATCTTTTGCACTGGGATGGCATTTGTTGGTTTCTTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGACTTTCCTAGAAGGTGCCTCTGAAGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTTGTTCGACAGTGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAGTAATGGTCATACAACTGAACACACTCTAAATCCAGAGGACTCAGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTTCAACTGTGCATGCTTCCCTGTAATCATCATTTCCATACTCGATGCATCGTCAAATGGCTTCGAATAAACGCAACCTGCCCCCTCTGCAAGTTCAGCATCGGACAAGGTGATTCCTTGGTCTGATTCATCTTTTCAATCGAGTCAGAGCATTCTTGAGGCTGAGACGAGATCTCTAACAAGTAACATGCAAAAGGAAACACACACAGGTCACATGCATCATCTCTTAACATATGTTGATTTGAGATTGAGAATGGGG

Coding sequence (CDS)

ATGGACGACGGCCGACCATCGAGCACTGGTTTCTTGTCCTGGCAGCGAACCATGAGCTCGAGATTCGCGCTTCCGTTGATTCAAGACGCCGCGAATTTGATCATGGAACATCGCGGCGTAATATTTGGTGACTGTGCCGATCCTCGAGTCGACGATGAGGAAGACGATAATGAATACGACCGTCGGGTTCTATTCCGGAATGGTTCTTCCTTCATCAAGCCTATTTTGGTACTCGACTTGTTTTGGAATTTGTTCTTCATTATTCTGTCTGTGATAGTGCTGGTATTGTCTGCTGAAGAGAAACCTACTGCTCCTTTGAGATTCTGGCTTTCCGGTTATGCTGTCCAGTGCCTTTTCCATGTCTTTTTTGTGTTCTTTGCTTACTTGAGAAGGAGTAATCGCTATCGATTTGGGTTTGAGAATCGTGGGGCTCAGGATGAATTTCGCCTTTCTCATAATCGTATAAGAGTTATGAAAAGATTGGAAGCACTGAACACAATGATAGCATATATCTGGTGGGTATTTGGATTCTATTGGATAGTCATGGGTGGTCAAGCTCTTCTGGAAGGTTCTCCTCGACTCTACTGTTACTTTCAGTCTTCTTGTGGACCTGTGGTTATATCTCCCGTAGGTTCTGTATTGTTTGTTGCTGATAGCCTTTTGTTTATGTTGGCAGTTGTTTTCCTAGCCTTTGATGTGTTCTTTATTATCTTTTGCACTGGGATGGCATTTGTTGGTTTCTTTGCTGTTTGCTGCATAATACCATTTTTAGCATATGGTTATACCATGACTTTCCTAGAAGGTGCCTCTGAAGATGAAATTAGGGCACTTCCCAAGTACAGGTTTCACCAAGACAATCCACTTGAGTTGTTCGACAGTGACAAGAAACAAGAAGTTGGGATGACATTGGAGCCTGGCTACAGTAATGGTCATACAACTGAACACACTCTAAATCCAGAGGACTCAGCATGCTGCATATGCCTTGCTCAGTATGTACATGGAGTTCAACTGTGCATGCTTCCCTGTAATCATCATTTCCATACTCGATGCATCGTCAAATGGCTTCGAATAAACGCAACCTGCCCCCTCTGCAAGTTCAGCATCGGACAAGGTGATTCCTTGGTCTGA

Protein sequence

MDDGRPSSTGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFFAYLRRSNRYRFGFENRGAQDEFRLSHNRIRVMKRLEALNTMIAYIWWVFGFYWIVMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEVGMTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSLV
Homology
BLAST of Clc04G06340 vs. NCBI nr
Match: XP_038881255.1 (E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida])

HSP 1 Score: 679.9 bits (1753), Expect = 1.3e-191
Identity = 338/375 (90.13%), Postives = 342/375 (91.20%), Query Frame = 0

Query: 1   MDDGRPSSTGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MDDGRPSST FLSWQRT+SSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD
Sbjct: 1   MDDGRPSSTSFLSWQRTISSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFF+ LSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFFAYLRRSNRYRFGFENRGAQDEFRLSHNRIRVMKRLEALNTMIAYIWWVFGFYWI 180
           VFFVF AYLRRSNRYRFGFENRGAQDEFRLSH+RIRVMKRLEALNTMIAYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSNRYRFGFENRGAQDEFRLSHHRIRVMKRLEALNTMIAYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCT 240
           VMGGQALLEGSPRLY                            LAVVFLAFDVFFIIFCT
Sbjct: 181 VMGGQALLEGSPRLY---------------------------WLAVVFLAFDVFFIIFCT 240

Query: 241 GMAFVGFFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEVG 300
           GMAFVGFFAVCCI+PFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLE FDSDKKQEVG
Sbjct: 241 GMAFVGFFAVCCIVPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLESFDSDKKQEVG 300

Query: 301 MTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 360
           MTLEPGYS GHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT
Sbjct: 301 MTLEPGYS-GHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 347

Query: 361 CPLCKFSIGQGDSLV 376
           CPLCKFSIGQGDSLV
Sbjct: 361 CPLCKFSIGQGDSLV 347

BLAST of Clc04G06340 vs. NCBI nr
Match: XP_004144310.1 (E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN54665.1 hypothetical protein Csa_012005 [Cucumis sativus])

HSP 1 Score: 664.8 bits (1714), Expect = 4.3e-187
Identity = 330/375 (88.00%), Postives = 338/375 (90.13%), Query Frame = 0

Query: 1   MDDGRPSSTGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MDD RPS++GFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFF+ LSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFFAYLRRSNRYRFGFENRGAQDEFRLSHNRIRVMKRLEALNTMIAYIWWVFGFYWI 180
           VFFVF AYLRRS+RYR GFENRGAQDE RLSHNRIRVMKRLEALNTM+AYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCT 240
           VMGGQALLEGSPRLY                            LAVVFLAFDVFFIIFCT
Sbjct: 181 VMGGQALLEGSPRLY---------------------------WLAVVFLAFDVFFIIFCT 240

Query: 241 GMAFVGFFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEVG 300
           GMAFVGFFAVCCIIPFLAYGYTM FLEGASEDEIRALPKYRFHQDNPLE FD+DKKQEVG
Sbjct: 241 GMAFVGFFAVCCIIPFLAYGYTMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVG 300

Query: 301 MTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 360
           MTLEPGY NGHTTEHTLN EDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT
Sbjct: 301 MTLEPGY-NGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 347

Query: 361 CPLCKFSIGQGDSLV 376
           CPLCKFSIGQGDSLV
Sbjct: 361 CPLCKFSIGQGDSLV 347

BLAST of Clc04G06340 vs. NCBI nr
Match: XP_022154475.1 (E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia])

HSP 1 Score: 642.9 bits (1657), Expect = 1.7e-180
Identity = 314/375 (83.73%), Postives = 335/375 (89.33%), Query Frame = 0

Query: 1   MDDGRPSSTGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD+GRPSSTGF+SW+RTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDE+D+ EYD
Sbjct: 1   MDEGRPSSTGFMSWRRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEDDETEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV+FR+GSSFIKPILVLDLFWNLFF+ ++V+VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVIFRHGSSFIKPILVLDLFWNLFFVFVAVLVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFFAYLRRSNRYRFGFENRGAQDEFRLSHNRIRVMKRLEALNTMIAYIWWVFGFYWI 180
           VFFVFFAYLRRS+RYRFGFE+RGAQDE R SHNRIR MKRLEALNTM+AYIWWVFGFY I
Sbjct: 121 VFFVFFAYLRRSSRYRFGFEHRGAQDELRFSHNRIRAMKRLEALNTMVAYIWWVFGFYLI 180

Query: 181 VMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCT 240
           VMGGQAL+EGSPRLY                            LAV+FLAFDVFFIIFCT
Sbjct: 181 VMGGQALVEGSPRLY---------------------------WLAVIFLAFDVFFIIFCT 240

Query: 241 GMAFVGFFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEVG 300
           GMAFVG FAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLE FDSDK QE+G
Sbjct: 241 GMAFVGLFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLEPFDSDKNQEIG 300

Query: 301 MTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 360
           MTLEPG+ N HTTEHTL+PEDSACCICLAQYVHGVQLCMLPC HHFHTRCIVKWLRINAT
Sbjct: 301 MTLEPGF-NDHTTEHTLHPEDSACCICLAQYVHGVQLCMLPCTHHFHTRCIVKWLRINAT 347

Query: 361 CPLCKFSIGQGDSLV 376
           CPLCKF+IGQGD+LV
Sbjct: 361 CPLCKFTIGQGDTLV 347

BLAST of Clc04G06340 vs. NCBI nr
Match: XP_022967823.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita maxima])

HSP 1 Score: 629.0 bits (1621), Expect = 2.6e-176
Identity = 312/375 (83.20%), Postives = 326/375 (86.93%), Query Frame = 0

Query: 1   MDDGRPSSTGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD GRP STGFLSW+RT+SSRFALPLIQDAANLIMEHRGVIFGDCA+PRVDDEED+N YD
Sbjct: 1   MDGGRPLSTGFLSWRRTLSSRFALPLIQDAANLIMEHRGVIFGDCAEPRVDDEEDENGYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV  RNGSSFIKPILVLDLFWNLFF+ +SVIVLVLSAEEKP+APLR WLSGYAVQCL H
Sbjct: 61  RRVFLRNGSSFIKPILVLDLFWNLFFVFVSVIVLVLSAEEKPSAPLRLWLSGYAVQCLLH 120

Query: 121 VFFVFFAYLRRSNRYRFGFENRGAQDEFRLSHNRIRVMKRLEALNTMIAYIWWVFGFYWI 180
           VFFVFFAY RRS+RYRF FENR AQDE RLSHNRIR +KRLEA NTMI+YIWWVFGFYWI
Sbjct: 121 VFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCT 240
           VMGGQ+LLEGSPRLY                            LAVVFLAFDVFFIIFCT
Sbjct: 181 VMGGQSLLEGSPRLY---------------------------WLAVVFLAFDVFFIIFCT 240

Query: 241 GMAFVGFFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEVG 300
           GMAFVGFF VCCIIPFLAYGYTMTFLEGASEDEIRALPKYRF QDNPLE FDSDKK EVG
Sbjct: 241 GMAFVGFFTVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFRQDNPLESFDSDKKHEVG 300

Query: 301 MTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 360
           MTLEPGY NG+TTEH LNPEDSACCICLAQYVHGVQLCMLPC+HHFHTRCIVKWLRINAT
Sbjct: 301 MTLEPGY-NGYTTEHLLNPEDSACCICLAQYVHGVQLCMLPCSHHFHTRCIVKWLRINAT 347

Query: 361 CPLCKFSIGQGDSLV 376
           CPLCKFS+G GDSLV
Sbjct: 361 CPLCKFSVGHGDSLV 347

BLAST of Clc04G06340 vs. NCBI nr
Match: XP_023543467.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 626.3 bits (1614), Expect = 1.7e-175
Identity = 312/375 (83.20%), Postives = 325/375 (86.67%), Query Frame = 0

Query: 1   MDDGRPSSTGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD GRPSSTGFLSW+RT+SSRFALPLIQDAANLIMEHRGVIFGDCA+PRVDDEED+N YD
Sbjct: 1   MDGGRPSSTGFLSWRRTLSSRFALPLIQDAANLIMEHRGVIFGDCAEPRVDDEEDENGYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV  RNGSSFIKPILVLDLFWNLFF+ +SVIVLVLSAEEKP+APLR WLSGYAVQCL H
Sbjct: 61  RRVFLRNGSSFIKPILVLDLFWNLFFVFVSVIVLVLSAEEKPSAPLRLWLSGYAVQCLLH 120

Query: 121 VFFVFFAYLRRSNRYRFGFENRGAQDEFRLSHNRIRVMKRLEALNTMIAYIWWVFGFYWI 180
           VFFVFFAY RRS+RYRF FENR AQDE RLSHNRIR +KRLEA NTMI+YIWWVFGFYWI
Sbjct: 121 VFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCT 240
           V GGQ+LLEGSPRLY                            LAVVFLAFDVFFIIFCT
Sbjct: 181 VTGGQSLLEGSPRLY---------------------------WLAVVFLAFDVFFIIFCT 240

Query: 241 GMAFVGFFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEVG 300
           GMAFVGFF VCCIIPFLAYGYTMTFLEGASEDEIRALPKYRF QDNPLE FDSDKK EVG
Sbjct: 241 GMAFVGFFTVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFRQDNPLESFDSDKKHEVG 300

Query: 301 MTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 360
           MTLEPGY NG+TTEH LN EDSACCICLAQYVHGVQLCMLPC+HHFHTRCIVKWLRINAT
Sbjct: 301 MTLEPGY-NGYTTEHLLNTEDSACCICLAQYVHGVQLCMLPCSHHFHTRCIVKWLRINAT 347

Query: 361 CPLCKFSIGQGDSLV 376
           CPLCKFSIG GDSLV
Sbjct: 361 CPLCKFSIGHGDSLV 347

BLAST of Clc04G06340 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.1e-55
Identity = 124/311 (39.87%), Postives = 169/311 (54.34%), Query Frame = 0

Query: 70  SFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFFAYL 129
           ++ KP++ LD+ WNL F+ + V VL+LS +EKP  PLR W+ GY +QC  H+  V   Y 
Sbjct: 104 AYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYR 163

Query: 130 RRSNRYR------FGFENRGAQDEFRLSHNRIR-----VMKRLEALNTMIAYIWWVFGFY 189
           RR  R         G  N  +Q    L+    R       K LE+ NTM ++IWW+ GFY
Sbjct: 164 RRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFY 223

Query: 190 WIVMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIF 249
           W+  GGQ L   SP+LY                            L ++FL FDVFF++F
Sbjct: 224 WVSAGGQTLSSDSPQLY---------------------------WLCIIFLGFDVFFVVF 283

Query: 250 CTGMAFVGFFAVCCIIP-FLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQ 309
           C  +A V   AVCC +P  +A  Y +   EGAS+++I  +PK+RF +   +E      + 
Sbjct: 284 CVALACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGKAR- 343

Query: 310 EVGMTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRI 369
             G+  E G  +    E +L+PED+ CCICL +Y  GV+L  LPCNHHFH  CI KWL I
Sbjct: 344 --GIMTECGTDS--PIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHI 382

BLAST of Clc04G06340 vs. ExPASy Swiss-Prot
Match: Q9LN71 (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 9.9e-54
Identity = 126/380 (33.16%), Postives = 184/380 (48.42%), Query Frame = 0

Query: 26  LIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIKPILVLDLFWNLF 85
           L + ++  +M    ++  + A  ++++ + D  Y             KP++VLD+ WNL 
Sbjct: 63  LSRASSGRVMREPSMLVREAAAEQLEERQSDWAYS------------KPVVVLDIVWNLA 122

Query: 86  FIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFFAYLRRSNR----------- 145
           F+ ++  +LV+S +E P  PLR WL GYA+QC+ H+  V   Y RR+ R           
Sbjct: 123 FVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPP 182

Query: 146 ----------------YRFGFENRGAQDEFRLSH---NRIRVMKRLEALNTMIAYIWWVF 205
                              G        +  L H       V K LE+ NTM ++IWW+ 
Sbjct: 183 RSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWII 242

Query: 206 GFYWIVMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFF 265
           GFYW+  GGQ L + SPR+Y                            L++VFL FDVFF
Sbjct: 243 GFYWVSAGGQELAQESPRIY---------------------------WLSIVFLGFDVFF 302

Query: 266 IIFCTGMAFVGFFAVCCIIP-FLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSD 325
           ++FC  +A V   AVCC +P  +A  Y +   EGAS+++I  L K++F +        +D
Sbjct: 303 VVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTND 362

Query: 326 KKQEVGMTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKW 375
           + Q     +          EHTL  ED+ CCICL+ Y  G +L  LPC HHFH  C+ KW
Sbjct: 363 EAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKW 403

BLAST of Clc04G06340 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 212.2 bits (539), Expect = 9.9e-54
Identity = 133/386 (34.46%), Postives = 193/386 (50.00%), Query Frame = 0

Query: 16  RTMSSRFALPLIQDAAN--LIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIK 75
           R    R A  L++ A++  ++M    ++  + A  ++++ + D  Y             K
Sbjct: 25  RRQGLREAARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYS------------K 84

Query: 76  PILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFFAYLRRSN 135
           P++VLD  WNL F++++  VLVLS++E P  PLR W+ GY +QC+ H+  V   Y RR++
Sbjct: 85  PVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNS 144

Query: 136 RYRFGFENRGAQDEF--------------------------RLSHNRIRVMKRLEALNTM 195
           R R     R +                              +L +      K LE+ NTM
Sbjct: 145 RRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTM 204

Query: 196 IAYIWWVFGFYWIVMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVV 255
           I++IWWV GFYW+  GGQ L +GSP+LY                            L +V
Sbjct: 205 ISFIWWVIGFYWVSSGGQELAQGSPQLY---------------------------WLCIV 264

Query: 256 FLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTMTFLEGASEDEIRALPKYRFHQ-- 315
           FL FDVFF++FC  +A V   AVCC +P  +A  Y +   EGAS+++I  L K++F +  
Sbjct: 265 FLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVG 324

Query: 316 DNPLELFDSDKKQ--EVGMTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPC 369
           D      D ++ Q    G+  E G  +    EH L  ED+ CCICL+ Y    +L  LPC
Sbjct: 325 DTMKHTVDEEQGQGDSGGVMTECGTDS--PVEHALPHEDAECCICLSAYEDETELRELPC 369

BLAST of Clc04G06340 vs. ExPASy Swiss-Prot
Match: Q8GUU2 (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.2e-52
Identity = 118/315 (37.46%), Postives = 173/315 (54.92%), Query Frame = 0

Query: 71  FIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFFAYLR 130
           + KP++  D+ WN   ++ S ++LV + EE+P  P+R W+  Y +QCLFHV  V+  Y R
Sbjct: 73  YSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVWICVYGLQCLFHVVLVWSEYWR 132

Query: 131 RSNRYRFGFENRGAQDEFRLSHN----------RIRVMKRLEALNTMIAYIWWVFGFYWI 190
           R++  R         +++ + ++              +KR E++NT+I++IWW+ GFYW+
Sbjct: 133 RNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYSFVKRCESINTVISFIWWIIGFYWV 192

Query: 191 VMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCT 250
           V GG  LL  +P LY                            L+V+FLA DVFF +FC 
Sbjct: 193 VEGGDKLLGEAPNLY---------------------------WLSVIFLAIDVFFAVFCV 252

Query: 251 GMAFVGFFAVCCIIP-FLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEV 310
            +A +   A+CC +P  +A  Y +   EG SE E+  LP Y+F      + F S++K   
Sbjct: 253 VLACLVGIALCCCLPCIIALLYAVAGTEGVSEAELGVLPLYKF------KAFHSNEKNIT 312

Query: 311 GM-TLEPGYSNG--HTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLR 370
           G   + P   NG    TE TL  ED+ CCICL+ Y  G +L  LPCNHHFH+ CIVKWL+
Sbjct: 313 GPGKMVPIPINGLCLATERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLK 354

Query: 371 INATCPLCKFSIGQG 372
           + ATCPLCK++I +G
Sbjct: 373 MRATCPLCKYNILKG 354

BLAST of Clc04G06340 vs. ExPASy Swiss-Prot
Match: Q7T037 (E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis OX=8355 GN=rnf12-b PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.5e-09
Identity = 31/89 (34.83%), Postives = 48/89 (53.93%), Query Frame = 0

Query: 290 LFDSDKKQEVGMTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTR 349
           L + D  Q  G+T E    N  T  +  N     C +C+ +Y  G +L  LPC+H +H  
Sbjct: 670 LNEDDDDQPRGLTKEQ-IDNLSTRNYGENDALKTCSVCITEYTEGNKLRKLPCSHEYHIH 729

Query: 350 CIVKWLRINATCPLCKFSI---GQGDSLV 376
           CI +WL  N+TCP+C+ ++   G  +S+V
Sbjct: 730 CIDRWLSENSTCPICRRAVLVAGNRESIV 757

BLAST of Clc04G06340 vs. ExPASy TrEMBL
Match: A0A0A0KYD1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G418580 PE=4 SV=1)

HSP 1 Score: 664.8 bits (1714), Expect = 2.1e-187
Identity = 330/375 (88.00%), Postives = 338/375 (90.13%), Query Frame = 0

Query: 1   MDDGRPSSTGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MDD RPS++GFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDD+EDDNEY+
Sbjct: 1   MDDVRPSNSGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDDEDDNEYE 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFF+ LSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFFAYLRRSNRYRFGFENRGAQDEFRLSHNRIRVMKRLEALNTMIAYIWWVFGFYWI 180
           VFFVF AYLRRS+RYR GFENRGAQDE RLSHNRIRVMKRLEALNTM+AYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCT 240
           VMGGQALLEGSPRLY                            LAVVFLAFDVFFIIFCT
Sbjct: 181 VMGGQALLEGSPRLY---------------------------WLAVVFLAFDVFFIIFCT 240

Query: 241 GMAFVGFFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEVG 300
           GMAFVGFFAVCCIIPFLAYGYTM FLEGASEDEIRALPKYRFHQDNPLE FD+DKKQEVG
Sbjct: 241 GMAFVGFFAVCCIIPFLAYGYTMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVG 300

Query: 301 MTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 360
           MTLEPGY NGHTTEHTLN EDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT
Sbjct: 301 MTLEPGY-NGHTTEHTLNAEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 347

Query: 361 CPLCKFSIGQGDSLV 376
           CPLCKFSIGQGDSLV
Sbjct: 361 CPLCKFSIGQGDSLV 347

BLAST of Clc04G06340 vs. ExPASy TrEMBL
Match: A0A6J1DJQ2 (E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC111021746 PE=4 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 8.4e-181
Identity = 314/375 (83.73%), Postives = 335/375 (89.33%), Query Frame = 0

Query: 1   MDDGRPSSTGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD+GRPSSTGF+SW+RTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDE+D+ EYD
Sbjct: 1   MDEGRPSSTGFMSWRRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEDDETEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV+FR+GSSFIKPILVLDLFWNLFF+ ++V+VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVIFRHGSSFIKPILVLDLFWNLFFVFVAVLVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFFAYLRRSNRYRFGFENRGAQDEFRLSHNRIRVMKRLEALNTMIAYIWWVFGFYWI 180
           VFFVFFAYLRRS+RYRFGFE+RGAQDE R SHNRIR MKRLEALNTM+AYIWWVFGFY I
Sbjct: 121 VFFVFFAYLRRSSRYRFGFEHRGAQDELRFSHNRIRAMKRLEALNTMVAYIWWVFGFYLI 180

Query: 181 VMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCT 240
           VMGGQAL+EGSPRLY                            LAV+FLAFDVFFIIFCT
Sbjct: 181 VMGGQALVEGSPRLY---------------------------WLAVIFLAFDVFFIIFCT 240

Query: 241 GMAFVGFFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEVG 300
           GMAFVG FAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLE FDSDK QE+G
Sbjct: 241 GMAFVGLFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLEPFDSDKNQEIG 300

Query: 301 MTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 360
           MTLEPG+ N HTTEHTL+PEDSACCICLAQYVHGVQLCMLPC HHFHTRCIVKWLRINAT
Sbjct: 301 MTLEPGF-NDHTTEHTLHPEDSACCICLAQYVHGVQLCMLPCTHHFHTRCIVKWLRINAT 347

Query: 361 CPLCKFSIGQGDSLV 376
           CPLCKF+IGQGD+LV
Sbjct: 361 CPLCKFTIGQGDTLV 347

BLAST of Clc04G06340 vs. ExPASy TrEMBL
Match: A0A6J1HW81 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111467225 PE=4 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 1.3e-176
Identity = 312/375 (83.20%), Postives = 326/375 (86.93%), Query Frame = 0

Query: 1   MDDGRPSSTGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD GRP STGFLSW+RT+SSRFALPLIQDAANLIMEHRGVIFGDCA+PRVDDEED+N YD
Sbjct: 1   MDGGRPLSTGFLSWRRTLSSRFALPLIQDAANLIMEHRGVIFGDCAEPRVDDEEDENGYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV  RNGSSFIKPILVLDLFWNLFF+ +SVIVLVLSAEEKP+APLR WLSGYAVQCL H
Sbjct: 61  RRVFLRNGSSFIKPILVLDLFWNLFFVFVSVIVLVLSAEEKPSAPLRLWLSGYAVQCLLH 120

Query: 121 VFFVFFAYLRRSNRYRFGFENRGAQDEFRLSHNRIRVMKRLEALNTMIAYIWWVFGFYWI 180
           VFFVFFAY RRS+RYRF FENR AQDE RLSHNRIR +KRLEA NTMI+YIWWVFGFYWI
Sbjct: 121 VFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCT 240
           VMGGQ+LLEGSPRLY                            LAVVFLAFDVFFIIFCT
Sbjct: 181 VMGGQSLLEGSPRLY---------------------------WLAVVFLAFDVFFIIFCT 240

Query: 241 GMAFVGFFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEVG 300
           GMAFVGFF VCCIIPFLAYGYTMTFLEGASEDEIRALPKYRF QDNPLE FDSDKK EVG
Sbjct: 241 GMAFVGFFTVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFRQDNPLESFDSDKKHEVG 300

Query: 301 MTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 360
           MTLEPGY NG+TTEH LNPEDSACCICLAQYVHGVQLCMLPC+HHFHTRCIVKWLRINAT
Sbjct: 301 MTLEPGY-NGYTTEHLLNPEDSACCICLAQYVHGVQLCMLPCSHHFHTRCIVKWLRINAT 347

Query: 361 CPLCKFSIGQGDSLV 376
           CPLCKFS+G GDSLV
Sbjct: 361 CPLCKFSVGHGDSLV 347

BLAST of Clc04G06340 vs. ExPASy TrEMBL
Match: A0A6J1GE01 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita moschata OX=3662 GN=LOC111453131 PE=4 SV=1)

HSP 1 Score: 625.9 bits (1613), Expect = 1.1e-175
Identity = 311/375 (82.93%), Postives = 325/375 (86.67%), Query Frame = 0

Query: 1   MDDGRPSSTGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MD GRPSSTGFLSW+RT+SSRFALPLIQDAANLIMEHRGVIFGDCA+PRVDDEED+N YD
Sbjct: 1   MDGGRPSSTGFLSWRRTLSSRFALPLIQDAANLIMEHRGVIFGDCAEPRVDDEEDENGYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRV  RNGSSFIKPILVLDLFWNLFF+ +SVIVLVLSAEEKP+APLR WLSGYAVQCL H
Sbjct: 61  RRVFLRNGSSFIKPILVLDLFWNLFFVFVSVIVLVLSAEEKPSAPLRLWLSGYAVQCLLH 120

Query: 121 VFFVFFAYLRRSNRYRFGFENRGAQDEFRLSHNRIRVMKRLEALNTMIAYIWWVFGFYWI 180
           VFFVFFAY RRS+RYRF FENR AQDE RLSHNRIR +KRLEA NTMI+YIWWVFGFYWI
Sbjct: 121 VFFVFFAYFRRSSRYRFVFENRVAQDELRLSHNRIRFLKRLEASNTMISYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCT 240
           V GGQ+LLEGSPRLY                            LAVVFLAFDVFFIIFCT
Sbjct: 181 VTGGQSLLEGSPRLY---------------------------WLAVVFLAFDVFFIIFCT 240

Query: 241 GMAFVGFFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEVG 300
           GMAFVGFF VCCIIPFLAYGYTMTFLEGASEDEIRALPKYRF QDNPLE FDSDKK EVG
Sbjct: 241 GMAFVGFFTVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFRQDNPLESFDSDKKHEVG 300

Query: 301 MTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 360
           MTLEPGY NG+TTEH LN EDSACCICLAQYVHGVQLCMLPC+HHFHTRCIVKWLRINAT
Sbjct: 301 MTLEPGY-NGYTTEHLLNTEDSACCICLAQYVHGVQLCMLPCSHHFHTRCIVKWLRINAT 347

Query: 361 CPLCKFSIGQGDSLV 376
           CPLCKFS+G GDSLV
Sbjct: 361 CPLCKFSVGHGDSLV 347

BLAST of Clc04G06340 vs. ExPASy TrEMBL
Match: A0A5A7SMU7 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00840 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 1.0e-162
Identity = 295/341 (86.51%), Postives = 301/341 (88.27%), Query Frame = 0

Query: 1   MDDGRPSSTGFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60
           MDD RPS++ FLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD
Sbjct: 1   MDDVRPSNSAFLSWQRTMSSRFALPLIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYD 60

Query: 61  RRVLFRNGSSFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120
           RRVLFRNGSSFIKPILVLDLFWNLFF+ LSV VLVLSAEEKPTAPLRFWLSGYAVQCLFH
Sbjct: 61  RRVLFRNGSSFIKPILVLDLFWNLFFVFLSVTVLVLSAEEKPTAPLRFWLSGYAVQCLFH 120

Query: 121 VFFVFFAYLRRSNRYRFGFENRGAQDEFRLSHNRIRVMKRLEALNTMIAYIWWVFGFYWI 180
           VFFVF AYLRRS+RYR GFENRGAQDE RLSHNRIRVMKRLEALNTM+AYIWWVFGFYWI
Sbjct: 121 VFFVFVAYLRRSSRYRLGFENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWI 180

Query: 181 VMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCT 240
           VMGGQALLEGSPRLY                            LAVVFLAFDVFFIIFCT
Sbjct: 181 VMGGQALLEGSPRLY---------------------------WLAVVFLAFDVFFIIFCT 240

Query: 241 GMAFVGFFAVCCIIPFLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEVG 300
           GMAFVG FAVCCIIPFLAYGYTM FLEGASEDEIRALPKYRFHQDNPLE FD+DKKQEVG
Sbjct: 241 GMAFVGLFAVCCIIPFLAYGYTMNFLEGASEDEIRALPKYRFHQDNPLESFDNDKKQEVG 300

Query: 301 MTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLP 342
           MTLEPGY NGHTTEHTLN EDSACCICLAQYVHGVQLCMLP
Sbjct: 301 MTLEPGY-NGHTTEHTLNAEDSACCICLAQYVHGVQLCMLP 313

BLAST of Clc04G06340 vs. TAIR 10
Match: AT1G68070.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 230.7 bits (587), Expect = 1.9e-60
Identity = 127/312 (40.71%), Postives = 180/312 (57.69%), Query Frame = 0

Query: 71  FIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFFAYLR 130
           + KP++ LD+ WN  F+++++++L++  EEKP  P+R W+ GYA+QCL HV  V+  + +
Sbjct: 64  YSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRK 123

Query: 131 RSNRYRFG------FENRGAQDEFRLSHNRIRVMKRLEALNTMIAYIWWVFGFYWIVMGG 190
           R+ R R G        N+ ++DE   +  R    K  E++NT+I+++WW+ GFYW+V GG
Sbjct: 124 RNARSRPGDLEAAQATNQDSEDED--NDERFLSTKTCESMNTIISFVWWIVGFYWLVSGG 183

Query: 191 QALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIFCTGMAF 250
             LL+ +  LY                            L  VFLAFDVFF IFC  +A 
Sbjct: 184 DILLQNATHLY---------------------------WLTFVFLAFDVFFAIFCVVLAC 243

Query: 251 VGFFAVCCIIP-FLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQEVG--- 310
           +   A+CC +P  +A  Y +   EGASE ++  LPKYRFH  N      +D+KQ  G   
Sbjct: 244 LIGIALCCCLPCIIALLYAVAGQEGASEADLSILPKYRFHTMN------NDEKQSDGGGK 303

Query: 311 MTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRINAT 370
           M      S     E  L PED+ CCICL+ Y  G +L  LPCNHHFH+ CIVKWL++NAT
Sbjct: 304 MIPVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNAT 340

Query: 371 CPLCKFSIGQGD 373
           CPLCKF+I +G+
Sbjct: 364 CPLCKFNILKGN 340

BLAST of Clc04G06340 vs. TAIR 10
Match: AT4G11680.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 218.8 bits (556), Expect = 7.5e-57
Identity = 124/311 (39.87%), Postives = 169/311 (54.34%), Query Frame = 0

Query: 70  SFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFFAYL 129
           ++ KP++ LD+ WNL F+ + V VL+LS +EKP  PLR W+ GY +QC  H+  V   Y 
Sbjct: 104 AYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYR 163

Query: 130 RRSNRYR------FGFENRGAQDEFRLSHNRIR-----VMKRLEALNTMIAYIWWVFGFY 189
           RR  R         G  N  +Q    L+    R       K LE+ NTM ++IWW+ GFY
Sbjct: 164 RRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFY 223

Query: 190 WIVMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFFIIF 249
           W+  GGQ L   SP+LY                            L ++FL FDVFF++F
Sbjct: 224 WVSAGGQTLSSDSPQLY---------------------------WLCIIFLGFDVFFVVF 283

Query: 250 CTGMAFVGFFAVCCIIP-FLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSDKKQ 309
           C  +A V   AVCC +P  +A  Y +   EGAS+++I  +PK+RF +   +E      + 
Sbjct: 284 CVALACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGKAR- 343

Query: 310 EVGMTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKWLRI 369
             G+  E G  +    E +L+PED+ CCICL +Y  GV+L  LPCNHHFH  CI KWL I
Sbjct: 344 --GIMTECGTDS--PIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHI 382

BLAST of Clc04G06340 vs. TAIR 10
Match: AT1G12760.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 212.2 bits (539), Expect = 7.0e-55
Identity = 126/380 (33.16%), Postives = 184/380 (48.42%), Query Frame = 0

Query: 26  LIQDAANLIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIKPILVLDLFWNLF 85
           L + ++  +M    ++  + A  ++++ + D  Y             KP++VLD+ WNL 
Sbjct: 63  LSRASSGRVMREPSMLVREAAAEQLEERQSDWAYS------------KPVVVLDIVWNLA 122

Query: 86  FIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFFAYLRRSNR----------- 145
           F+ ++  +LV+S +E P  PLR WL GYA+QC+ H+  V   Y RR+ R           
Sbjct: 123 FVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPP 182

Query: 146 ----------------YRFGFENRGAQDEFRLSH---NRIRVMKRLEALNTMIAYIWWVF 205
                              G        +  L H       V K LE+ NTM ++IWW+ 
Sbjct: 183 RSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESANTMFSFIWWII 242

Query: 206 GFYWIVMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVVFLAFDVFF 265
           GFYW+  GGQ L + SPR+Y                            L++VFL FDVFF
Sbjct: 243 GFYWVSAGGQELAQESPRIY---------------------------WLSIVFLGFDVFF 302

Query: 266 IIFCTGMAFVGFFAVCCIIP-FLAYGYTMTFLEGASEDEIRALPKYRFHQDNPLELFDSD 325
           ++FC  +A V   AVCC +P  +A  Y +   EGAS+++I  L K++F +        +D
Sbjct: 303 VVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTND 362

Query: 326 KKQEVGMTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPCNHHFHTRCIVKW 375
           + Q     +          EHTL  ED+ CCICL+ Y  G +L  LPC HHFH  C+ KW
Sbjct: 363 EAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKW 403

BLAST of Clc04G06340 vs. TAIR 10
Match: AT1G63170.1 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 212.2 bits (539), Expect = 7.0e-55
Identity = 133/386 (34.46%), Postives = 193/386 (50.00%), Query Frame = 0

Query: 16  RTMSSRFALPLIQDAAN--LIMEHRGVIFGDCADPRVDDEEDDNEYDRRVLFRNGSSFIK 75
           R    R A  L++ A++  ++M    ++  + A  ++++ + D  Y             K
Sbjct: 25  RRQGLREAARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYS------------K 84

Query: 76  PILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFFAYLRRSN 135
           P++VLD  WNL F++++  VLVLS++E P  PLR W+ GY +QC+ H+  V   Y RR++
Sbjct: 85  PVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNS 144

Query: 136 RYRFGFENRGAQDEF--------------------------RLSHNRIRVMKRLEALNTM 195
           R R     R +                              +L +      K LE+ NTM
Sbjct: 145 RRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTM 204

Query: 196 IAYIWWVFGFYWIVMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADSLLFMLAVV 255
           I++IWWV GFYW+  GGQ L +GSP+LY                            L +V
Sbjct: 205 ISFIWWVIGFYWVSSGGQELAQGSPQLY---------------------------WLCIV 264

Query: 256 FLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTMTFLEGASEDEIRALPKYRFHQ-- 315
           FL FDVFF++FC  +A V   AVCC +P  +A  Y +   EGAS+++I  L K++F +  
Sbjct: 265 FLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVG 324

Query: 316 DNPLELFDSDKKQ--EVGMTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLCMLPC 369
           D      D ++ Q    G+  E G  +    EH L  ED+ CCICL+ Y    +L  LPC
Sbjct: 325 DTMKHTVDEEQGQGDSGGVMTECGTDS--PVEHALPHEDAECCICLSAYEDETELRELPC 369

BLAST of Clc04G06340 vs. TAIR 10
Match: AT1G12760.2 (Zinc finger, C3HC4 type (RING finger) family protein )

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-54
Identity = 121/336 (36.01%), Postives = 169/336 (50.30%), Query Frame = 0

Query: 70  SFIKPILVLDLFWNLFFIILSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFFAYL 129
           ++ KP++VLD+ WNL F+ ++  +LV+S +E P  PLR WL GYA+QC+ H+  V   Y 
Sbjct: 24  AYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYR 83

Query: 130 RRSNR---------------------------YRFGFENRGAQDEFRLSH---NRIRVMK 189
           RR+ R                              G        +  L H       V K
Sbjct: 84  RRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAK 143

Query: 190 RLEALNTMIAYIWWVFGFYWIVMGGQALLEGSPRLYCYFQSSCGPVVISPVGSVLFVADS 249
            LE+ NTM ++IWW+ GFYW+  GGQ L + SPR+Y                        
Sbjct: 144 HLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIY------------------------ 203

Query: 250 LLFMLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIP-FLAYGYTMTFLEGASEDEIRALP 309
               L++VFL FDVFF++FC  +A V   AVCC +P  +A  Y +   EGAS+++I  L 
Sbjct: 204 ---WLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLT 263

Query: 310 KYRFHQDNPLELFDSDKKQEVGMTLEPGYSNGHTTEHTLNPEDSACCICLAQYVHGVQLC 369
           K++F +        +D+ Q     +          EHTL  ED+ CCICL+ Y  G +L 
Sbjct: 264 KFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELR 323

Query: 370 MLPCNHHFHTRCIVKWLRINATCPLCKFSIGQGDSL 375
            LPC HHFH  C+ KWL INATCPLCK++I +  +L
Sbjct: 324 ELPCGHHFHCSCVDKWLYINATCPLCKYNILKSSNL 332

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038881255.11.3e-19190.13E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida][more]
XP_004144310.14.3e-18788.00E3 ubiquitin-protein ligase At4g11680 [Cucumis sativus] >KGN54665.1 hypothetical... [more]
XP_022154475.11.7e-18083.73E3 ubiquitin-protein ligase At4g11680-like [Momordica charantia][more]
XP_022967823.12.6e-17683.20E3 ubiquitin-protein ligase At1g63170-like [Cucurbita maxima][more]
XP_023543467.11.7e-17583.20E3 ubiquitin-protein ligase At1g63170-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q93Z921.1e-5539.87E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116... [more]
Q9LN719.9e-5433.16E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127... [more]
Q8LDB89.9e-5434.46E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631... [more]
Q8GUU24.2e-5237.46E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV... [more]
Q7T0371.5e-0934.83E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis OX=8355 GN=rnf12-b PE=2 SV... [more]
Match NameE-valueIdentityDescription
A0A0A0KYD12.1e-18788.00RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G418580 P... [more]
A0A6J1DJQ28.4e-18183.73E3 ubiquitin-protein ligase At4g11680-like OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1HW811.3e-17683.20E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1GE011.1e-17582.93E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A5A7SMU71.0e-16286.51E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
Match NameE-valueIdentityDescription
AT1G68070.11.9e-6040.71Zinc finger, C3HC4 type (RING finger) family protein [more]
AT4G11680.17.5e-5739.87Zinc finger, C3HC4 type (RING finger) family protein [more]
AT1G12760.17.0e-5533.16Zinc finger, C3HC4 type (RING finger) family protein [more]
AT1G63170.17.0e-5534.46Zinc finger, C3HC4 type (RING finger) family protein [more]
AT1G12760.21.2e-5436.01Zinc finger, C3HC4 type (RING finger) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 324..364
e-value: 2.4E-5
score: 33.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 323..365
e-value: 1.4E-10
score: 41.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 324..365
score: 12.297489
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 306..372
e-value: 6.2E-17
score: 62.6
NoneNo IPR availablePANTHERPTHR45977:SF19RING-FINGER UBIQUITIN LIGASEcoord: 211..375
NoneNo IPR availablePANTHERPTHR45977:SF19RING-FINGER UBIQUITIN LIGASEcoord: 16..195
NoneNo IPR availablePANTHERPTHR45977TARGET OF ERK KINASE MPK-1coord: 16..195
NoneNo IPR availablePANTHERPTHR45977TARGET OF ERK KINASE MPK-1coord: 211..375
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 311..369

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc04G06340.2Clc04G06340.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane