Clc04G05860 (gene) Watermelon (cordophanus) v2

Overview
NameClc04G05860
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr04: 18549818 .. 18558158 (+)
RNA-Seq ExpressionClc04G05860
SyntenyClc04G05860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGCGCTTCTTGTATTTACGGGTCTCAATGTTGTGCTGGTATCAACAATAACTCCAGTCTATGATTTTGTGTGCTTTCATCCATACTGGGAAAGAAGGGTATTTTCTATTATCACTTCCAAGTTATTTGCATGATACCAAACTAGCATCTTCCTAGGGTTCATCATGTTGCTTTTATGTAAATGTGTACTAGCTTATTATACTTATGGTAAATATGTATTGTTCTGTGTTTGCTGTCGATTCTCATTAGCATGGTTGCACTGTTTAGCTTTAAAGTGGTGATAGGATATCTGAACTAGGATATGCTTGTTGTAAGGTTTCACTGGAGAGGGTAAGTTGCAGTTGGGTGGGGGATTGTTTAGTTTCTAGTTGTGAGAATTGGAGGTTGTCACTTGTCTGAGAATGTTATAGTTGTGGAATTGGATTTTCGTTAGCCTCTAAACTCCTTCCTCAGGACACTGTTGCGTTGCCCATGGGGAGACATATGTACCATGTACTAGGAGAAGGGGGAGGGGGGGAATATTTTGAGGAAACTTTTTTTATTTGAATAAAAAAATAATTTTGTTGATGTATGAAGTTTACAAAAGGGATGGATAATCCATGATGATTAGTAAAGGCTTTCTCCATTGGATAAAAAGGAAGCATAACTATGTGAAGCAAAAATCCTGGACAATTTACACGAAGAGATAGCATAGTAGATAATGAGATCAAAGAGCACTTCCAAAATTGTGCTCTGTCCGAAAGAAAAAAAAAAAAAAACCTGTGATTACGCTCTTTCCAAATGACCGAAAAGAAGGCCTTGTAGATGTGAACCCGTAGCAAGGATTTGACATTTTTGAAGGGGCAGCCTGATCAGACAAAAGTGAGGATATCCTTCACATCTCTGGGGTAGTCCAAGGCCAACCAAAAGTGTTGAGAATTCACCTCTCACACCCTCAAAAACCACAGAATTGTATATTCAGCTTCTCATACTTCAATTTTTAAACCAACTTTTTTTCTTAAAAGAATTCAAAGAATATAACCGGCCTAAACCGACCAACCGAAGGCTGGTTTCTACTCCTTCACGGTCGAGATCGGTTTGAACCTTTATTAAATCGACCATAGTCGGTTTGGTCGAAAAACTGACTCCGACCGATCACTGCACACCACTAAAATTAATTAATGTTTTATTGCATTCAGTTCGATTTGATTAGAATTATATATTATTGAACCAACAACCGAACTGAACTTCTTGATATTTAAAAAAGATAAACCGAGAAAACCTAAATATTCATAAAATCCAAACCGAACCGATCGGTTTGGTCCGGTTTGTCAGTTTGGACTGGTATTTGAACACCCTAGGATCCCTAATCTTTATGTTGTCGTTTTTGTTGTATTCGTTATGAGATTATCAATGCTAGATTATGATGTGCTAGGATTATGGTAAATTAGGATATCTTGGTTAAATCCTTAATTGATTAGGATTAGGATTTGGATTAATTTTCTTGATTGATTAGGATTATGATTAGTTTCCTTGGTTTATTAGGATTAGGATTAGTTTCTTTGATTAATTAGAATTAGGATTAGTTTCCTTTACAATTCTCTATAAATGGAGGAATTTTCTTCTTGTATTGATAACTTTTGATTCATAATAAAGACATTGATTTTGTTATTGGAGATTTCTCTCCTTTTATCTTTTAGGCTACATCAAATTATCTTGTGGAAGATTGTTCATTATCTGTTTTCAAGGCTATAATCCTCCATTAAATTTGTCGACCTAAATGTTATTGGTTATGAAGTTAACTAATGATTACCCAAAATGTCAAGTAAAATAAACTTAGTTACATGTGTGGTGGTAGAAAATTTACTTTGCTAGGGAATGGTTGTGGGGGAACTAAAATTTTAAAATTATTAGATATCTCTTTTATGTGGTGGCAGGTCTTCCTTTCTAGGGCTTAATTTAATTGTATATTATAATGGGTATTTATGAATGAGTGACTTGTTCTAGGTGTTAATAGCTGGACTTGAGTTGTTAAAGAAGTGTGGATTATCTGCCTGTGTATGAAATAACTTGGAGATCTTATCTCCCGATTGTTGGGAACTTTAAGAGCATTAGGTAAGCTATATGCACACACACACCATTGGGCAAGAGAGATTTTTATTCTTCATGGGGGGAAGGAGGTCCTTCAGAAGTTATGCTTGTCTATCAGCAACTCTCCTATTAACAAAAGATAGTGGAAGACCAAAAAAGGATTTGAAAACTCCTATATGGAGATTTGAAGTTCCCAAACAAGTAAAGTTATTTTTGTGGTCCCCTTCGCACAAACATATAAACATGTATGAGTAACAAGCTCCAGAAAAGAATCCTCATGCCTCTCTCCAATTGTATGAATTGTTTGAGTAAAGAAAAAGATAAATTGATAAATCATACTTTTTGGGCTGCCCGTTGGCAGTAAGCTGGTACATTTTAAACAAGTATTTTGGTATCGTCGGTTGTGTGCACAAAGACATAAAGAGTGCTTTGGGAGATTCTATTAGGTTGGTGGAAATTCACTGCCTGCTCTTGGGTTGAACTGGGCAAAATTTTTTCGTGTTAGGAATTTGAATTGAGGTCTAACATCCAATTGGTCATATGTATAGAAAGGCTGAATAGGTAGAATGTTTAAGAGGCATAATGACCAAATGATACATGGAAATCACACTAAAAAGTCAAACAAATTATTCACTGCCAATTCAATCATAGTTTATTGAATAGGTCATCTATTACCTTCCCTGAGGTTAGTTTAGTGAATAGGTGAGCTATTACCTTCCTAAGGTTGAAGATTTGATCTCTTACTTCATTTGTTGAACTCAAAAACAAAAATAGTATTCATCAAGTTGTTAAAGGGACCAAATTAAAGATGTAGAATGAATGAATTAAAGAGAGAGAGAAACAAGCCTAGTGCTAATACCCAATAGTCGGAGTATGACCAACAAAATATTTATAAAAGAAATAATAGGAAGTTGGATGGTGAAAGCCAATCAAAGGATCAAAGAAGGGAACATTTTCCTTTAGGCCTAAAAGGCTAAAATTGAACCACAGTAAGAATACTTCACGTTGAAGTCATTATTTACAAACTTTTTATTTGAAAGTAGTTTTTTAAAAACAAAAATGAGGTGTATGCATGCAAGAAGTAATGGAAGGGACCTATTGCTGATGAGTGAGTGTTGTGCTGTTATGGGGCTCAAAATATTGTAGTTAGTCGTTTGGCAGCATTATGGGTAAGGGAGGGGGGAATCTAGTTAGGTTGCTGAGAACATTATATGATTTCATACTATCAACAAAATTGTTTCTTATTCAAAAAAAGAAGTATTGGGATAGATAGGGAACTCTCTGATTTCCTTTGGCTCGTTCTTTGTTTTTGTGAAAATGAACCAATACTCATCAAGAACGTACTTAAAGGAAAGAAGAAAAAATGGCTATGCAAACATGCTTTTATCAGACTATTGTTGTAAAATAACATTAAACTGTCCTGAAAACAGCTTATCAAAAACAGCTCCTATGCTTCTTCGGACTTGAGATCTAGGGATTTTATCCTTAATTTATCTTGTCATTGAAATGTTGTTTCATATCTTATACGTACCACTTTTAATGTTGTTAGCATATTAGCAGCCTAGCTTTGCAGGTATTTTGTGTTGCATTGCATTTACCCACCCACCTGCCTTCTCTTCTATACTCCTTTTTTTCTTATTTTGTTAATTTCTGCTTTGCTTGAGTTAATAACATGGACATTTACTATTCAGTTAAAAAACTTCCCCCAAAAAAAAAAAAAAAAAAACTCTCTGTTAGTCTATGTAATAGATGTTCTCATATTCTGGCTGCAGAGAGAACGGCGTCGGCAGCAACGTGAAGCTGGTAACGGGAAAAAGCATTTAGCAGACAGATGAGCATCTGCAATGCCTTTGGGATTGTATATTGCATCTAAACTCCCCATACACGATCTTTTGAGGTGAGATTTTATCTTATTCTTTCCATCATTCAAAAAATGAAGATAAGAATGGGATAAGAAAGCCCTTTGCTTGCGAACAGCAGGATTTATTGTCCACTGATTGCAGATTGTTGGAAAAGACTTCGAACTGGACCATTAGATTCACAAGCTGTCCCGATTGATATGTCATAATCAAACTACCTTCTCTTCTAGACTCCCTTTTTTTATTTTGTTAATATCTGCTTTGCTTGAGCAATTTGCTTTTCCAATGATACAGATTGTTTACACTAAGTTCATATGTGCTTTCACATGGTCTTTTGTCAAAATAGGTATGAGAATTGATGTTTTTACTGTCTATCATCACTACCTTACAAATTCATTCTCTTTTCCATGTATAAATGTTCTATCCAAGTGACGATGTACTGGGACAAAAATAGCTGGTTGATTTTTTTATTATATGAATACATATTTTGCGCTCTTGTAGTTTTAACTTCTTACCATTTTGAAAGTGGACATTTATATCTTTGTGATTCAGATGCAAAATGTAATTGTTTTGCTGTGGCATCAAACTGGAGGTATGTTTACACTTGTGTTGAACTGTAAGGTTGTTTTTGGAAATAAGATATCGATGTAACTTTTACGTCGTATGTCACCATGTCATCAAACTGCATGTCCTTGTGTAACTAATATTAACCGTTCTATAGATGTTGTTCCGCACAGTCTTGCTTGAGTTGCTGCTGGGGTGGATGGTGTTTTTTTACTAGAGGGTCTTCCTCTTGGTAGCCAGTGAGGCTTTTTGTTCCGGGTCGTTTATTTGTTGGTTGGTGGTTGTATTTACGAATGTAATTAATTAGTGAAATACATTTTTTTGATTATGAAATAAGGAAAATAGTTAAAAATGGCCAGAGTTTGATTGCTGGTTGATTATCACAATAAATGACTAAATGAACAGACTACTAATGTGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAATTTTTTAAAATGAGGTAACTAGATTTTGTTTGTTAGAGTGGCAATGGCTAGGTGATATGGGAGTGTAAAAGAGGAGTAAGAAGCAAGGAGGGAGAAGAGTGCACCTCAACAAAATAAAAAGATATTTACTCAGTAATGAATGTCACATTAGTTGAGTTCAATCCTAGCATCATTGTCTATGTCATTCTTTGTAATGGTCAACTAACATTCAGTGGAGGTGGAAGTACCATTTTGAAATATTTTTCAAACAAAAGTGTTTATTTCGAAACTTTAAGAATTAAATAGGTATAACTTTAAATTTTAGAGACCAAATATGTATTTTACCAAGATTGATGACTCAAACCGGTAAAATCATCTTCAAGATGTTTTGAATGAATTCTCAAGTGAAGAGTTGATAAAAAATAAACACGTTTACTCATGTTATTGAGGGTAGAGATGTTCATTTAATTAGTGGAGTTGGGGTCTTGTGGGACCTATCCCAAATGAGGCAAATTTTTGATTAGATGGGAAATGAAGGAGGGAGGGAGTGGCGAGACTCTTCACCTCAATTATATATATATATATATGTAAAATCTTAAGTTGAAGACTTAAAATATGTTTTAATATTTATATTTTTAACTTTGAGAAATTATGAAAACTAAACATTTTAATTATATTATTTATCAATTGAATATTATTATTTTTAGCAAGAGATTTTACAAATTTTCAATTAACCAAAAATTATATTGTAAATGATCCATTTAATATATTTGTCTATGTGGCAAAGTCGATGACCAAATTTGATCAATGTTACACACTCTTTTCATAGGCGTGTTGAGCCCTTTGTTTAATTATTTTTTCGAATCTAGATTTATTTACTTGGGTTGACAAGATAAATAAATATATTTTTTGTTGGGTTGACAAGATCAATAATACTTTTTGAAGTTTCATTTTGAAACTGCGAAATGTTTTCAGGTTCTGGAAAATAGTAAAATATTTTCAAGTTTATTGAGAATACCAAGAAGATTTTGGATTTAATTAATTAATAGATTATAGAAATACCCCAAAGAGCTCGTATCATGGATTTAACCCAAGATTATAGGTCTTTTATAATCATACCAACCCAGATTTTATTGGGATTCAAAATCTAAACTATTACGAATGAAAATATGCTATTCTACAATATAGACCTTAAATAGAAAAGTATAGCAAACCGAAAGTCTATTTAAAAAACTTTGAATAAGAATAACATACAAATAATAATAATAACAACAACTTGTGTTGGTGGCAAAATCCGAACAAGAAAATCCACCTGACTTTTACATGCCTTCAATGGTGAATTTATAATGTGGAGAAGAAAGACGATCTGCAAGTCAAAGAAGAAGAAAACACCAGGGTGGTGCTTGCCACAAAGTCTTCGATGCTTAAGTTAGCAAATGGTTAGTGTAAGCAAGAAGTAGGGAGAAGAACTTACCTTTTGGGGTGCACTTTGATTTCCAAATTCCTTTGGGACTAGGAGATAGTTTTGAACCCAAGTAGGATTAGAGAATGCAACTTCGAGTTGGCCATAGGGGGCTTGGACCTTGGTCCACAAAATGTGGGTCATTATGGATAAGGTAGGCTCGGCTTCAGCCAGGCTGAGGCGAGCTGGTTTGGGTCAACCGGCCCGACCCCTCACCTTTTCCCAGTCCTATCCTCCTTTGGCCCATTAGCCTATTTCTCATCCACTGGTTCTCACTTGATGATCTCTCTTTCAACTTTTACCTTTAACTATCAGTCTTTCCAAGCTCATAACTCTTGGTCCGAGAACGACCTATCGTCCAAGGCCGAGGTGGGCAAGTTAAGCCAAATGGCCCGACTCGCCTTACCCTTGATTGAGGAGGGCAAGTTGGGCCTTTTGGCCCAATGCTTCTCTTTTCTCTAGTTCTTTCCCTCTCCGATCAATTGAGTCGTTTTCTACACTCCTTTTGATTTTACCCTTAATAGCTTGTCTCTAAAAGCGACTTGATTCTTGGTCCAAAAGTGACCCTAACATTAGCCCTTACTCCTTAGTTGGGATTTTGAAGGACTAACCCATGAGTTTGCTCTTGAAAGGTCCCAGATTGAGAGTATTTGTCCATGTGATAGCCTCAGCCCTACACAATGTGCACCTTGGAGTTTTGGACGACCAGATTTACATTTCTAAAACTTTGTTTGGAAAGACTCACCAAGCTCGTTGATGCGCACTTTTAGGGTTAACCGCAAGTGTACGGGTCAAGTTATAATATAAGACGGTTAAGTCCGAATATCGTTCCACTGGAGATCCAATTGGGAAGGTTTAAGTTACTTAGCTATTCTAGAATCGAATCAATTTTATTTGAGGATTGAAATTGAATATTATAAGTTATGGAAAAAATACAAATCAAATAAGGAAAGTATCAAAGGGAGAAACACAAGAGTCAAAGAGAGTTCTAGGGTAATGAATCCTTGTTTATTTCATCATGCAATATTATAGATTTCATGGATTTTATTGCAATTCATATGCCTAAGTCTAGAAACTTAATTCCAAGTTATTTTCTCTAAAAAACAACCCTTTCTCATGCAACTCGATTGATTATTAATCTCTTAAAACCAATACAAAATTACATGACATTAAAAATAGTCTTTAGCAACTTTTATTGTCAACCTAACTACTCTCGTGATAGATTAACAACAATTCATTGTTATAGATCAAGTTAAACAAACAATCTCTCAATCATACATCTAACCTAACATGTGAAGATGGCCAATCCACAAGAATTAAACATAATAACAATGAAAAGCATAATCATTCCAACAAAACCATGAAAATCTACAAAATCAACATAAATTCATAAACAAATCATCAAAACCCTAAAACTAAAGAGTTTAACCACTCATAGCTTGAAGCAACATGTTTAAGCAAAATAAACAAAGAAAGAGTGTAAAGAAATGGAAACTCTATTGAAAAGAGGCTCTTGATTGAGGTAGCACCGTCACGATCTCCTTGGCTCTCACGTCGGAATTCGAAGAGCACTACGACTATCTTGAACTCTTTTCCTCTTCCTTGTAACTAACTCACTCTTTGAACCCTCACTTAATTCTCTCCTTTTTATGCCTTTTTAGGTCTGTAACTTCCTTGCTTTGCTTTGATTTTTCTGGATGATTTAGGCTGCTGGAAACCCCCAAATTTATATAGTTTGGCCGCCCAAAAATTTTCCAAAAATACAAAATTTTCATTTAAGGAAAGCTGGCGCCGCGGTGCTAGGGCTACATCCAAAAAAAGTTTGTTCTCGGGTTTTAGCGCTGCGGCAGCGCCATCTCGGCGCCGCTATGCTACTATGCGTCCAGAACTATGCGTTGATGTTTCAGCGCCGCGGCGCTATTCCCAAAATTCGCCCTTTTTAG

mRNA sequence

ATGACTGCGCTTCTTGTATTTACGGGTCTCAATGTTGTGCTGGTATCAACAATAACTCCAGTCTATGATTTTGTGTGCTTTCATCCATACTGGGAAAGAAGGAGAGAACGGCGTCGGCAGCAACGTGAAGCTGATGCAAAATGTAATTGTTTTGCTGTGGCATCAAACTGGAGATGTTGTTCCGCACAGTCTTGCTTGAGTTGCTGCTGGGGTGGATGGCTCGGCTTCAGCCAGGCTGAGGCGAGCTGGTTTGGGTCAACCGGCCCGACCCCTCACCTTTTCCCAGTCCTATCCTCCTTTGGCCCATTAGCCTATTTCTCATCCACTGGTTCTCACTTGATGATCTCTCTTTCAACTTTTACCTTTAACTATCAGTCTTTCCAAGCTCATAACTCTTGGTCCGAGAACGACCTATCGTCCAAGGCCGAGGCTGCTGGAAACCCCCAAATTTATATAGTTTGGCCGCCCAAAAATTTTCCAAAAATACAAAATTTTCATTTAAGGAAAGCTGGCGCCGCGGTGCTAGGGCTACATCCAAAAAAAGTTTGTTCTCGGGTTTTAGCGCTGCGGCAGCGCCATCTCGGCGCCGCTATGCTACTATGCGTCCAGAACTATGCGTTGATGTTTCAGCGCCGCGGCGCTATTCCCAAAATTCGCCCTTTTTAG

Coding sequence (CDS)

ATGACTGCGCTTCTTGTATTTACGGGTCTCAATGTTGTGCTGGTATCAACAATAACTCCAGTCTATGATTTTGTGTGCTTTCATCCATACTGGGAAAGAAGGAGAGAACGGCGTCGGCAGCAACGTGAAGCTGATGCAAAATGTAATTGTTTTGCTGTGGCATCAAACTGGAGATGTTGTTCCGCACAGTCTTGCTTGAGTTGCTGCTGGGGTGGATGGCTCGGCTTCAGCCAGGCTGAGGCGAGCTGGTTTGGGTCAACCGGCCCGACCCCTCACCTTTTCCCAGTCCTATCCTCCTTTGGCCCATTAGCCTATTTCTCATCCACTGGTTCTCACTTGATGATCTCTCTTTCAACTTTTACCTTTAACTATCAGTCTTTCCAAGCTCATAACTCTTGGTCCGAGAACGACCTATCGTCCAAGGCCGAGGCTGCTGGAAACCCCCAAATTTATATAGTTTGGCCGCCCAAAAATTTTCCAAAAATACAAAATTTTCATTTAAGGAAAGCTGGCGCCGCGGTGCTAGGGCTACATCCAAAAAAAGTTTGTTCTCGGGTTTTAGCGCTGCGGCAGCGCCATCTCGGCGCCGCTATGCTACTATGCGTCCAGAACTATGCGTTGATGTTTCAGCGCCGCGGCGCTATTCCCAAAATTCGCCCTTTTTAG

Protein sequence

MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREADAKCNCFAVASNWRCCSAQSCLSCCWGGWLGFSQAEASWFGSTGPTPHLFPVLSSFGPLAYFSSTGSHLMISLSTFTFNYQSFQAHNSWSENDLSSKAEAAGNPQIYIVWPPKNFPKIQNFHLRKAGAAVLGLHPKKVCSRVLALRQRHLGAAMLLCVQNYALMFQRRGAIPKIRPF
Homology
[Close]
BLAST of Clc04G05860 vs. NCBI nr
Match: XP_031740521.1 (uncharacterized protein LOC101220293 [Cucumis sativus] >XP_031740522.1 uncharacterized protein LOC101220293 [Cucumis sativus] >KAE8649679.1 hypothetical protein Csa_012121 [Cucumis sativus])

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-14
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA 45
          MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA
Sbjct: 8  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA 51

[Close]
BLAST of Clc04G05860 vs. NCBI nr
Match: XP_038882345.1 (uncharacterized protein LOC120073600 [Benincasa hispida])

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-14
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA 45
          MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA
Sbjct: 8  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA 51

[Close]
BLAST of Clc04G05860 vs. NCBI nr
Match: XP_015866375.1 (uncharacterized protein LOC107403960 [Ziziphus jujuba])

HSP 1 Score: 89.7 bits (221), Expect = 3.3e-14
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 0 

Query: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREADAKCNCFAVASNWR 59
          MTALLVFTGLNV+LVSTITPVYDFVCFHPYWERRRE+RRQ+REA +  N     S WR
Sbjct: 8  MTALLVFTGLNVILVSTITPVYDFVCFHPYWERRREQRRQEREAASARN-----SGWR 60

[Close]
BLAST of Clc04G05860 vs. NCBI nr
Match: XP_022153946.1 (uncharacterized protein LOC111021335 [Momordica charantia])

HSP 1 Score: 89.4 bits (220), Expect = 4.3e-14
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA 45
          MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERR+QQREA
Sbjct: 8  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRQQQREA 51

[Close]
BLAST of Clc04G05860 vs. NCBI nr
Match: XP_022931821.1 (uncharacterized protein LOC111438118 [Cucurbita moschata] >XP_022931822.1 uncharacterized protein LOC111438118 [Cucurbita moschata] >XP_023517396.1 uncharacterized protein LOC111781173 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 87.8 bits (216), Expect = 1.3e-13
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0 

Query: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA 45
          MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRE RR+QREA
Sbjct: 8  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRREHRREQREA 51

[Close]
BLAST of Clc04G05860 vs. ExPASy TrEMBL
Match: A0A0A0KYV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G431930 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.2e-15
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA 45
          MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA
Sbjct: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA 44

[Close]
BLAST of Clc04G05860 vs. ExPASy TrEMBL
Match: A0A6P3YS46 (uncharacterized protein LOC107403960 OS=Ziziphus jujuba OX=326968 GN=LOC107403960 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.6e-14
Identity = 45/58 (77.59%), Postives = 49/58 (84.48%), Query Frame = 0 

Query: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREADAKCNCFAVASNWR 59
          MTALLVFTGLNV+LVSTITPVYDFVCFHPYWERRRE+RRQ+REA +  N     S WR
Sbjct: 8  MTALLVFTGLNVILVSTITPVYDFVCFHPYWERRREQRRQEREAASARN-----SGWR 60

[Close]
BLAST of Clc04G05860 vs. ExPASy TrEMBL
Match: A0A6J1DM83 (uncharacterized protein LOC111021335 OS=Momordica charantia OX=3673 GN=LOC111021335 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-14
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = 0 

Query: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA 45
          MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERR+QQREA
Sbjct: 8  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRQQQREA 51

[Close]
BLAST of Clc04G05860 vs. ExPASy TrEMBL
Match: A0A6J1EUP9 (uncharacterized protein LOC111438118 OS=Cucurbita moschata OX=3662 GN=LOC111438118 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.1e-14
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0 

Query: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA 45
          MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRE RR+QREA
Sbjct: 8  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRREHRREQREA 51

[Close]
BLAST of Clc04G05860 vs. ExPASy TrEMBL
Match: A0A1S3C1N0 (uncharacterized protein LOC103495817 OS=Cucumis melo OX=3656 GN=LOC103495817 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 8.0e-14
Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = 0 

Query: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREA 45
          M ALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERR+QQREA
Sbjct: 8  MAALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRQQQREA 51

[Close]
BLAST of Clc04G05860 vs. TAIR 10
Match: AT5G09225.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 73.2 bits (178), Expect = 3.0e-13
Identity = 35/46 (76.09%), Postives = 39/46 (84.78%), Query Frame = 0 

Query: 1  MTALLVFTGLNVVLVSTITPVYDFVCFHPYWERRRERRRQQREADA 47
          +  LL+FTG+N VLV TITPVYDFVCF PYWERRRER RQ+REA A
Sbjct: 8  LKGLLLFTGINFVLVQTITPVYDFVCFLPYWERRRERIRQEREAAA 53

The following BLAST results are available for this feature:
BLAST of Clc04G05860 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031740521.11.5e-14100.00uncharacterized protein LOC101220293 [Cucumis sativus] >XP_031740522.1 uncharact... [more]
XP_038882345.11.5e-14100.00uncharacterized protein LOC120073600 [Benincasa hispida][more]
XP_015866375.13.3e-1477.59uncharacterized protein LOC107403960 [Ziziphus jujuba][more]
XP_022153946.14.3e-1497.73uncharacterized protein LOC111021335 [Momordica charantia][more]
XP_022931821.11.3e-1395.45uncharacterized protein LOC111438118 [Cucurbita moschata] >XP_022931822.1 unchar... [more]
BLAST of Clc04G05860 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc04G05860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYV77.2e-15100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G431930 PE=4 SV=1[more]
A0A6P3YS461.6e-1477.59uncharacterized protein LOC107403960 OS=Ziziphus jujuba OX=326968 GN=LOC10740396... [more]
A0A6J1DM832.1e-1497.73uncharacterized protein LOC111021335 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1EUP96.1e-1495.45uncharacterized protein LOC111438118 OS=Cucurbita moschata OX=3662 GN=LOC1114381... [more]
A0A1S3C1N08.0e-1495.45uncharacterized protein LOC103495817 OS=Cucumis melo OX=3656 GN=LOC103495817 PE=... [more]
BLAST of Clc04G05860 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G09225.13.0e-1376.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36392TRANSMEMBRANE PROTEINcoord: 1..45

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc04G05860.1Clc04G05860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane