Clc04G03990 (gene) Watermelon (cordophanus) v2

Overview
NameClc04G03990
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionReverse transcriptase domain-containing protein
LocationClcChr04: 13660725 .. 13664075 (+)
RNA-Seq ExpressionClc04G03990
SyntenyClc04G03990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTGGAAGTGTAGATCGCGGGAAGATTGGCTTAAATGGGGGGATAGGAACACAAAGTGGTTCCATAGGAAAGCCTCCCATAGGAAACAGGTTAACATGATTGGTGGTATCCAGGATAACTATGGTAATTGGGTTGAGGACGAAGATAAGATCGGGGATATCGCTACAAACTATTTCCGCAATCTTTTTTAATCCTCTCTATCGAGTGAGCATGTGATCGCAAGGGTGACCAACTGCAAAATTAGTAAAATCCCAGATCATCTCCAGTGGGGTATGAACAATCCTTTCTCGAAAGAGGACATTGAGATGGTTGTCAAAGGTATGGGTCCCTATAAAGCCCCAGGCCCTGATGGGGTGCATGCTATGTTCTATCAAAAGTACTGGGACATTGTGGGGCAGGACACAATGAGAATATGCCTGAGGATCCTGAATGAAGGGGAGAATGTAGGCCCCCTTAACAAGACCTTAATTTCTTTGATTCCCAAAGTTAAGAAGCCAAAGCATTTGTCTGAGTTTCGGCCCATCAGCTTGTGCAATGTGAGCTATAAAATTATTGCTAAATATTTGGTCAATAGACTGAAAAGAGCGCTCAATGAGATTATAGCACCAACTCAATCTACCTTCGTTCTGGGGAGAATGATTACTGATAATGCTATTTTGGGTTTTAAATGCTTACATGCTATTAGTAGCAAACGAGTTGGGAAAGATGGGTGGGTGGCTCTTAAATTGGGCATGAGCAAGGCCTATGACACGGTCGAATGGCCGTTTTTGCGAGCTATGCTCCTTTCCATTGGCCTTGACAGGGCGTGGGTAAGGATTCTCATGAGGTGTGTGGTAACAGTCCAATGTCCTGTCCTCATCAATTGTAAGCCCCATCACGAGTTTGTTCCTCAAAGAGGTCTTCGCCAAGGGGACCCTCTCTCTCCTTATCTGTTCCTCATTTGCACGGAAGGTTTGTCGGCTCTTCTACACAGGGAAGAATCTCTGTCTCTTATTCATGGTATTCGTTTAAATAGACATTGCCCGTCCATTTCTCACTTATTTTTTTTTTCAAATGACAGCTTGATTTTCTTTAAAGCGTCGATTTTCGAGAGCAAGAATATTCGCAAAGTTTTGCAAGAGTATGAAGAAGTGTCGGGCCAAATGATAAACCTGGATAAGTCTGAATGTCTCTTTAGTAAGAATGTTAGGCAGCAGTTGGCGATTGAAATCAATAATGTTCTAGGAGTGCGAAAAACTGACTCTTTAGGGATATATTTGGGGATGCTGGTCCATAATTGTAAGAATAAATCTCGACTATTTAACAGGCTGAAGGAAAGAGTCTGAAGGGTTTTGCAAGGCTGGAAAGAGAAGCTCTTCTCCCTTAGTGGCAAAGAGACTTTGATCAAGGCTATAGCCCAAGCAATCCTCATCTATATGATGAGTTGTTTCAAGCTTCCCTACACAGTTTGTGATGATCTAAATAGGGCCTGTGCTCGTTTCTGGTGGGGGGGAAAAAAAGAAAATGCACTGGATGAGCTGGAACAAGCTTTGTGTTAGTAAGGATGCGGGGGGGTCTTGGTCTTCGAGATCTCCAGTTATTTAACCAGGCTATGCTTGCTAAACAAAGCTCGCGAATAGTTAAAAATTCTAACAGCCTGCTTGCGCGTGTTCTCAAAGGCCGATATTTTAAGGATGGTGATTTTTGCAATGCCCTGTTGGGGAGCAATCCCTCCCTCACTTGGAGGGGTATTTTGTGGGGGAGGGAGTTGTTCCTCAAAGGTTATAGAGGAAGGTGGGAAAAGGGAATTGTGTTAGTATTTTTCATGACCCGTGGATTTTGGAGGTTGACCATAGGACTCCTATTTGCATTAATGGAAATTTGGCCTTGATGAGGGTCCGAGATATTATTAACAGTGATGGAAGTTGGAACTTTGAGTTGATTCATAACATTTTCCTCCCTAGTGATGCAAAGTCCATTATTAGTGTGCCCCGCCGGGGTATCGGGGGAGCGGATGAGATTATTTGGGGTTTCGACCCAAATGTTTGTTTCTCTGTTAAAAGTGCGTACAACTTAGCGGTGAACTTAAAAGTGTCACTCAGTGGTTCTAGTTCTGACCTTCTGAAGAATAAGCCTTTCTGAAAATCTGTCTGGAGGTTTCAAGTTCCTTCAAGGGTGAAAATGTTGGTGTAGAAGTCCATTACCGATTCCTTGCCCACGCTGAGCAACATATCAAAGAAAGGAATTGCTACTAACCCACTTTGTTTTTTTTGCAGGAAATTTGTGGAATCATTGAGCCATGTGTTGTGGGGGTGTAAGTTTACTAAAATCATTTGGCTTTCTATTTTTCCTTCCTTACCTGGTTTTTTATCTAATTTCAGGGACTGTTGGAGTCCAGCGGGAAGCTGCTTGGTACGGATCGGGATACTGCCGCCATCCTTTTCTAGGATGTCTGGAGCTACAGGAACCTTTTGCTGCATAATGGAACCCCCCATGTGCGCAATGTTTTGGTTGACAAGATCTTCGCGCATGTCGAGGAGTTTTGTAGGGGAAATAGCGTTGAGCAAGGGTCTCTTTGGAGAGAGTTGACGGGGGGCCTAGAGGTGTGGGTGCCGCCTGTTTTGGGCTCTTGGAAAATCAACACTTATGCCTCGTGGTCTAAGCTTAAAGGAACGGGTGGGATTAGTTGGGTGGTTCGTGACTCATCTGGCTCGATCATCCTAGCTGGATGTGAGAAAGTGGCCCTCTTCTAGCCCATAAAGTTCCTTGAGGCTTTGGCGATGATTAGAGGTATTTCGCTCAAGGGTCCCTTCCCAATGTTTCATGGGAGTCTGATTGTATGAACCTTATCAACGCCATAAATCATAAGACTTCGGATCTATCGGAATTGTTGAGTTTTGTTGAGGAGATTGGGTCTTTGGCCGATTCTGCTCATGTGGTTTCCTTTCGTTGGTGTATCTGGTCGACAAATGGGTTGGCTCATCGCTTGGCTCGAGCAGCAGTGTGGAGTGGTGACTGGAAGGGGTTTTTTGTTTCTGGTTCTTCTTCTAGCTCTGAAGAAGTAGTTAGGATACCTTGTATTATTCCAGACTCTTTCTCCTCGGTCTTTGAAGAGGAGGGTTGTGGTTGTGGTTGATTTTTGAATGAATTTTCTTTCTTAAAAAAAAAATAATAATATAAGACTAGTTGCACAAGGATTTTCACAAAGGCCTAGTATTGATTATGAGGAGACATATGCTCTAGTGGTGGATGCAATTACATTAAGATATTTAATTGGTCTGACTGTGTATGAAAATCTGGACATGCATCTTACGGATGTAGTCACAACATATTTATATGAATCTCTTGATAAATGTCGAAACAATTAG

mRNA sequence

ATGTATTGGAAGTGTAGATCGCGGGAAGATTGGCTTAAATGGGGGGATAGGAACACAAAGGTGACCAACTGCAAAATTAGTAAAATCCCAGATCATCTCCAGTGGGGTATGAACAATCCTTTCTCGAAAGAGGACATTGAGATGGTTGTCAAAGGTATGGGTCCCTATAAAGCCCCAGGCCCTGATGGGGTGCATGCTATGTTCTATCAAAAGTACTGGGACATTGTGGGGCAGGACACAATGAGAATATGCCTGAGGATCCTGAATGAAGGGGAGAATGTAGGCCCCCTTAACAAGACCTTAATTTCTTTGATTCCCAAAGTTAAGAAGCCAAAGCATTTGTCTGAGTTTCGGCCCATCAGCTTGTGCAATGTGAGCTATAAAATTATTGCTAAATATTTGGTCAATAGACTGAAAAGAGCGCTCAATGAGATTATAGCACCAACTCAATCTACCTTCGTTCTGGGGAGAATGATTACTGATAATGCTATTTTGGGTTTTAAATGCTTACATGCTATTAGTAGCAAACGAGTTGGGAAAGATGGGTGGGTGGCTCTTAAATTGGGCATGAGCAAGGCCTATGACACGGTCGAATGGCCGTTTTTGCGAGCTATGCTCCTTTCCATTGGCCTTGACAGGGCGTGGGTAAGGATTCTCATGAGGTGTGTGGTAACAGTCCAATGTCCTGTCCTCATCAATTGTAAGCCCCATCACGAGTTTGTTCCTCAAAGAGGTCTTCGCCAAGGGGACCCTCTCTCTCCTTATCTGTTCCTCATTTGCACGGAAGGTTTGTCGGCTCTTCTACACAGGGAAGAATCTCTGTCTCTTATTCATGCGTCGATTTTCGAGAGCAAGAATATTCGCAAAGTTTTGCAAGAGTATGAAGAAGTGTCGGGCCAAATGATAAACCTGGATAAGTCTGAATGTCTCTTTAGTAAGAATGTTAGGCAGCAGTTGGCGATTGAAATCAATAATGTTCTAGGAGTGCGAAAAACTGACTCTTTAGGGATATATTTGGGGATGCTGAAAGAGAAGCTCTTCTCCCTTAGTGGCAAAGAGACTTTGATCAAGGCTATAGCCCAAGCAATCCTCATCTATATGATGAGTTGTTTCAAGCTTCCCTACACAGTTTGTGATGATCTAAATAGGGCCTCTGGAACAAGCTTTGTGTTAGTAAGGATGCGGGGGGGTCTTGGTCTTCGAGATCTCCAGTTATTTAACCAGGCTATGCTTGCTAAACAAAGCTCGCGAATAGTTAAAAATTCTAACAGCCTGCTTGCGCGTGTTCTCAAAGGCCGATATTTTAAGGATGGTGATTTTTGCAATGCCCTGTTGGGGAGCAATCCCTCCCTCACTTGGAGGGGTATTTTGTGGGGGAGGGAGTTGTTCCTCAAAGGTTATAGAGGAAGGTGGGAAAAGGGAATTGTGTTAGTTGACCATAGGACTCCTATTTGCATTAATGGAAATTTGGCCTTGATGAGGGTCCGAGATATTATTAACAGTGATGGAAGTTGGAACTTTGAGTTGATTCATAACATTTTCCTCCCTAGTGATGCAAAGTCCATTATTAGTGTGCCCCGCCGGGGTATCGGGGGAGCGGATGAGATTATTTGGGGTTTCGACCCAAATGTTTGTTTCTCTGTTAAAAGTGCGTACAACTTAGCGAAGTCCATTACCGATTCCTTGCCCACGCTGAGCAACATATCAAAGAAAGGAATTGCTACTAACCCACTTTGTTTTTTTTGCAGGAAATTTGTGGAATCATTGAGCCATGTGTTGTGGGGGTGTAAGTTTACTAAAATCATTTGGCTTTCTATTTTTCCTTCCTTACCTGGTTTTTTATCTAATTTCAGGGACTGTTGGAGTCCAGCGGGAAGCTGCTTGGATGTCTGGAGCTACAGGAACCTTTTGCTGCATAATGGAACCCCCCATGTGCGCAATGTTTTGGTTGACAAGATCTTCGCGCATGTCGAGGAGTTTTGTAGGGGAAATAGCGTTGAGCAAGGGTCTCTTTGGAGAGAGTTGACGGGGGGCCTAGAGGTGTGGGTGCCGCCTGTTTTGGGCTCTTGGAAAATCAACACTTATGCCTCGTGGTCTAAGCTTAAAGGAACGGGTGGGATTAGTTGGGTGGTTCGTGACTCATCTGGCTCGATCATCCTAGCTGGATGTGAGAAAAGGTATTTCGCTCAAGGGTCCCTTCCCAATGTTTCATGGGAGTCTGATTGTATGAACCTTATCAACGCCATAAATCATAAGACTTCGGATCTATCGGAATTGTTGAGTTTTGTTGAGGAGATTGGGTCTTTGGCCGATTCTGCTCATGTGGTTTCCTTTCGTTGGTGTATCTGGTCGACAAATGGGTTGGCTCATCGCTTGGCTCGAGCAGCAGTGTGGAGTGGTGACTGGAAGGGGTTTTTTGTTTCTGGTTCTTCTTCTAGCTCTGAAGAAGTAGTTAGGATACCTTGTATTATTCCAGACTCTTTCTCCTCGGTCTTTGAAGAGGAGGGTTGTGGTTGTGGATTTTCACAAAGGCCTAGTATTGATTATGAGGAGACATATGCTCTAGTGGTGGATGCAATTACATTAAGATATTTAATTGGTCTGACTGTGTATGAAAATCTGGACATGCATCTTACGGATGTAGTCACAACATATTTATATGAATCTCTTGATAAATGTCGAAACAATTAG

Coding sequence (CDS)

ATGTATTGGAAGTGTAGATCGCGGGAAGATTGGCTTAAATGGGGGGATAGGAACACAAAGGTGACCAACTGCAAAATTAGTAAAATCCCAGATCATCTCCAGTGGGGTATGAACAATCCTTTCTCGAAAGAGGACATTGAGATGGTTGTCAAAGGTATGGGTCCCTATAAAGCCCCAGGCCCTGATGGGGTGCATGCTATGTTCTATCAAAAGTACTGGGACATTGTGGGGCAGGACACAATGAGAATATGCCTGAGGATCCTGAATGAAGGGGAGAATGTAGGCCCCCTTAACAAGACCTTAATTTCTTTGATTCCCAAAGTTAAGAAGCCAAAGCATTTGTCTGAGTTTCGGCCCATCAGCTTGTGCAATGTGAGCTATAAAATTATTGCTAAATATTTGGTCAATAGACTGAAAAGAGCGCTCAATGAGATTATAGCACCAACTCAATCTACCTTCGTTCTGGGGAGAATGATTACTGATAATGCTATTTTGGGTTTTAAATGCTTACATGCTATTAGTAGCAAACGAGTTGGGAAAGATGGGTGGGTGGCTCTTAAATTGGGCATGAGCAAGGCCTATGACACGGTCGAATGGCCGTTTTTGCGAGCTATGCTCCTTTCCATTGGCCTTGACAGGGCGTGGGTAAGGATTCTCATGAGGTGTGTGGTAACAGTCCAATGTCCTGTCCTCATCAATTGTAAGCCCCATCACGAGTTTGTTCCTCAAAGAGGTCTTCGCCAAGGGGACCCTCTCTCTCCTTATCTGTTCCTCATTTGCACGGAAGGTTTGTCGGCTCTTCTACACAGGGAAGAATCTCTGTCTCTTATTCATGCGTCGATTTTCGAGAGCAAGAATATTCGCAAAGTTTTGCAAGAGTATGAAGAAGTGTCGGGCCAAATGATAAACCTGGATAAGTCTGAATGTCTCTTTAGTAAGAATGTTAGGCAGCAGTTGGCGATTGAAATCAATAATGTTCTAGGAGTGCGAAAAACTGACTCTTTAGGGATATATTTGGGGATGCTGAAAGAGAAGCTCTTCTCCCTTAGTGGCAAAGAGACTTTGATCAAGGCTATAGCCCAAGCAATCCTCATCTATATGATGAGTTGTTTCAAGCTTCCCTACACAGTTTGTGATGATCTAAATAGGGCCTCTGGAACAAGCTTTGTGTTAGTAAGGATGCGGGGGGGTCTTGGTCTTCGAGATCTCCAGTTATTTAACCAGGCTATGCTTGCTAAACAAAGCTCGCGAATAGTTAAAAATTCTAACAGCCTGCTTGCGCGTGTTCTCAAAGGCCGATATTTTAAGGATGGTGATTTTTGCAATGCCCTGTTGGGGAGCAATCCCTCCCTCACTTGGAGGGGTATTTTGTGGGGGAGGGAGTTGTTCCTCAAAGGTTATAGAGGAAGGTGGGAAAAGGGAATTGTGTTAGTTGACCATAGGACTCCTATTTGCATTAATGGAAATTTGGCCTTGATGAGGGTCCGAGATATTATTAACAGTGATGGAAGTTGGAACTTTGAGTTGATTCATAACATTTTCCTCCCTAGTGATGCAAAGTCCATTATTAGTGTGCCCCGCCGGGGTATCGGGGGAGCGGATGAGATTATTTGGGGTTTCGACCCAAATGTTTGTTTCTCTGTTAAAAGTGCGTACAACTTAGCGAAGTCCATTACCGATTCCTTGCCCACGCTGAGCAACATATCAAAGAAAGGAATTGCTACTAACCCACTTTGTTTTTTTTGCAGGAAATTTGTGGAATCATTGAGCCATGTGTTGTGGGGGTGTAAGTTTACTAAAATCATTTGGCTTTCTATTTTTCCTTCCTTACCTGGTTTTTTATCTAATTTCAGGGACTGTTGGAGTCCAGCGGGAAGCTGCTTGGATGTCTGGAGCTACAGGAACCTTTTGCTGCATAATGGAACCCCCCATGTGCGCAATGTTTTGGTTGACAAGATCTTCGCGCATGTCGAGGAGTTTTGTAGGGGAAATAGCGTTGAGCAAGGGTCTCTTTGGAGAGAGTTGACGGGGGGCCTAGAGGTGTGGGTGCCGCCTGTTTTGGGCTCTTGGAAAATCAACACTTATGCCTCGTGGTCTAAGCTTAAAGGAACGGGTGGGATTAGTTGGGTGGTTCGTGACTCATCTGGCTCGATCATCCTAGCTGGATGTGAGAAAAGGTATTTCGCTCAAGGGTCCCTTCCCAATGTTTCATGGGAGTCTGATTGTATGAACCTTATCAACGCCATAAATCATAAGACTTCGGATCTATCGGAATTGTTGAGTTTTGTTGAGGAGATTGGGTCTTTGGCCGATTCTGCTCATGTGGTTTCCTTTCGTTGGTGTATCTGGTCGACAAATGGGTTGGCTCATCGCTTGGCTCGAGCAGCAGTGTGGAGTGGTGACTGGAAGGGGTTTTTTGTTTCTGGTTCTTCTTCTAGCTCTGAAGAAGTAGTTAGGATACCTTGTATTATTCCAGACTCTTTCTCCTCGGTCTTTGAAGAGGAGGGTTGTGGTTGTGGATTTTCACAAAGGCCTAGTATTGATTATGAGGAGACATATGCTCTAGTGGTGGATGCAATTACATTAAGATATTTAATTGGTCTGACTGTGTATGAAAATCTGGACATGCATCTTACGGATGTAGTCACAACATATTTATATGAATCTCTTGATAAATGTCGAAACAATTAG

Protein sequence

MYWKCRSREDWLKWGDRNTKVTNCKISKIPDHLQWGMNNPFSKEDIEMVVKGMGPYKAPGPDGVHAMFYQKYWDIVGQDTMRICLRILNEGENVGPLNKTLISLIPKVKKPKHLSEFRPISLCNVSYKIIAKYLVNRLKRALNEIIAPTQSTFVLGRMITDNAILGFKCLHAISSKRVGKDGWVALKLGMSKAYDTVEWPFLRAMLLSIGLDRAWVRILMRCVVTVQCPVLINCKPHHEFVPQRGLRQGDPLSPYLFLICTEGLSALLHREESLSLIHASIFESKNIRKVLQEYEEVSGQMINLDKSECLFSKNVRQQLAIEINNVLGVRKTDSLGIYLGMLKEKLFSLSGKETLIKAIAQAILIYMMSCFKLPYTVCDDLNRASGTSFVLVRMRGGLGLRDLQLFNQAMLAKQSSRIVKNSNSLLARVLKGRYFKDGDFCNALLGSNPSLTWRGILWGRELFLKGYRGRWEKGIVLVDHRTPICINGNLALMRVRDIINSDGSWNFELIHNIFLPSDAKSIISVPRRGIGGADEIIWGFDPNVCFSVKSAYNLAKSITDSLPTLSNISKKGIATNPLCFFCRKFVESLSHVLWGCKFTKIIWLSIFPSLPGFLSNFRDCWSPAGSCLDVWSYRNLLLHNGTPHVRNVLVDKIFAHVEEFCRGNSVEQGSLWRELTGGLEVWVPPVLGSWKINTYASWSKLKGTGGISWVVRDSSGSIILAGCEKRYFAQGSLPNVSWESDCMNLINAINHKTSDLSELLSFVEEIGSLADSAHVVSFRWCIWSTNGLAHRLARAAVWSGDWKGFFVSGSSSSSEEVVRIPCIIPDSFSSVFEEEGCGCGFSQRPSIDYEETYALVVDAITLRYLIGLTVYENLDMHLTDVVTTYLYESLDKCRNN
Homology
[Close]
BLAST of Clc04G03990 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])

HSP 1 Score: 489.2 bits (1258), Expect = 7.6e-134
Identity = 321/1015 (31.63%), Postives = 468/1015 (46.11%), Query Frame = 0 

Query: 1    MYWKCRSREDWLKWGDRNTKVTNCKIS--------------------------------- 60
            +YWK RSR DWLK GD+NTK  + K S                                 
Sbjct: 427  VYWKQRSRADWLKEGDKNTKFFHSKASARRRKNKIWGVEDDQGNWVDDPEGIEGEFCGFF 486

Query: 61   -----------------------KIPDHLQWGMNNPFSKEDIEMVVKGMGPYKAPGPDGV 120
                                   K+   +   +  PF+ EDI   +  M P KAPGPDG+
Sbjct: 487  QQLFTSSNPSQTQISEALKGLLPKVSQEMNTHLEEPFTPEDITRALSEMCPTKAPGPDGL 546

Query: 121  HAMFYQKYWDIVGQDTMRICLRILNEGENVGPLNKTLISLIPKVKKPKHLSEFRPISLCN 180
             A F+QK+W IVG+   + CL ILNE   +  LN T I+LIPKV+KP+ + EFRPISLCN
Sbjct: 547  PAAFFQKHWQIVGEGLTKTCLHILNEQGTLDSLNHTFIALIPKVEKPRKVMEFRPISLCN 606

Query: 181  VSYKIIAKYLVNRLKRALNEIIAPTQSTFVLGRMITDNAILGFKCLHAISSKRVGKDGWV 240
            V Y+I+AK + NRLK  LN II+P QS F+  R+ITDN I+G++CLH I   +  ++G V
Sbjct: 607  VVYRIVAKAIANRLKPILNHIISPNQSAFIPNRLITDNVIIGYECLHKIRLSKGRRNGLV 666

Query: 241  ALKLGMSKAYDTVEWPFLRAMLLSIGLDRAWVRILMRCVVTVQCPVLINCKPHHEFVPQR 300
            ALKL +SKAYD VEW FL   + ++G    W+ ++M C+ T    VLIN  P     P+R
Sbjct: 667  ALKLDISKAYDRVEWNFLEQTMSNLGFSAKWISLIMSCITTTCFSVLINGNPVGLIKPER 726

Query: 301  GLRQGDPLSPYLFLICTEGLSALLHR------------------------EESLSLIHAS 360
            GLRQG PLSPYLF++C E  S LL++                        ++SL    AS
Sbjct: 727  GLRQGCPLSPYLFILCAEAFSNLLNQAEREQKIRGLKFAQDITITHLLFADDSLVFSKAS 786

Query: 361  IFESKNIRKVLQEYEEVSGQMINLDKSECLFSKNVRQQLAIEINNVLGVRKTDSLGIYLG 420
            + + K ++ +   Y + SGQ+ N +KS   FS     +    I ++  ++       YLG
Sbjct: 787  VADCKYLKGIFDCYAKASGQIFNFEKSSMFFSGKASSEQISAIKSIFQLKVVPKYEKYLG 846

Query: 421  M-----------LKE--------------KLFSLSGKETLIKAIAQAILIYMMSCFKLPY 480
            +            KE              KLFS  GKE LIKA+AQA+  Y MS FKLP 
Sbjct: 847  LPPMLGRNKMSFFKEVKLKVTSKISSWHHKLFSAGGKEILIKAVAQAVPAYAMSVFKLPK 906

Query: 481  TVCDDLNR------------------ASGTSFVLVRMRGGLGLRDLQLFNQAMLAKQSSR 540
             +C+D+ +                  A   S    + RGGLG RDL  FNQA++AKQ  R
Sbjct: 907  GLCEDIQKEIARFWWGTKKDKHGIHWARWDSMSKAKRRGGLGFRDLPSFNQALVAKQGWR 966

Query: 541  IVKNSNSLLARVLKGRYFKDGDFCNALLGSNPSLTWRGILWGRELFLKGYRGRWEKGIVL 600
            +V+  NSL+ARV+K RY+K+  F NA +GSNPS  WR ILWG ++  KG R R   G  +
Sbjct: 967  LVRYPNSLMARVMKARYYKNSTFWNAKVGSNPSFIWRSILWGSQVIKKGVRWRIGDGKKV 1026

Query: 601  VDHR----------TPICINGNLALMRVRDIINSDGSWNFELIHNIFLPSDAKSIISVPR 660
            + ++           PI          V D+I+S+  W  + +   F+  D ++I+ +  
Sbjct: 1027 LVYKDKWIPRPATFQPISPKTLPHETVVADLIDSENKWRVDRLEQHFMKEDIEAILKILL 1086

Query: 661  RGIGGADEIIWGFDPNVCFSVKSAYNLA-------------------------------- 720
                  DE++W FD    +SVKS Y LA                                
Sbjct: 1087 PSGKEEDEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESSNSSSRLWKIPWMLDLPEKVK 1146

Query: 721  ----KSITDSLPTLSNISKKGIATNPLCFFCRKFVESLSHVLWGCKFTKIIW----LSIF 780
                +++ + LPT  N+ K+     P+C  C+  VE++SHVL  CK  + IW    L + 
Sbjct: 1147 IFMWRALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQ 1206

Query: 781  PSL---PGFLSNFRDCWSPAGS---------CLDVWSYRNLLLHNGTPHVRNVLVDKIFA 807
            PS      F S  ++ WS + +         C  +WS RN  +  G       L  K  +
Sbjct: 1207 PSKDHNQDFFSAIQEMWSRSSTAEAELMIVYCWVIWSARNKFIFEGKKSDSRFLAAKADS 1266

[Close]
BLAST of Clc04G03990 vs. NCBI nr
Match: XP_023878301.1 (uncharacterized protein LOC111990748 [Quercus suber])

HSP 1 Score: 472.2 bits (1214), Expect = 9.7e-129
Identity = 331/1007 (32.87%), Postives = 469/1007 (46.57%), Query Frame = 0 

Query: 2    YWKCRSREDWLKWGDRNTKVTNCKIS---------------------------------- 61
            YW  R++  WLK GDRNTK  + + S                                  
Sbjct: 299  YWGQRAKAHWLKEGDRNTKFFHAQASERRKQNTIVGIWDEQGRWCDNEESIAQAAISYFN 358

Query: 62   --------------------KIPDHLQWGMNNPFSKEDIEMVVKGMGPYKAPGPDGVHAM 121
                                K+ + +   +   F+KE++ + +K + P KAPGPDG+ A+
Sbjct: 359  NIYSSSHPSQIEEVTEAIPFKVTEEMNESLIREFTKEEVAVALKQIHPNKAPGPDGMSAV 418

Query: 122  FYQKYWDIVGQDTMRICLRILNEGENVGPLNKTLISLIPKVKKPKHLSEFRPISLCNVSY 181
            F+QKYW IVG +   + L +LN    +  LNKT ISLIPK   PK +++FRPISLCNV Y
Sbjct: 419  FFQKYWSIVGNNVTDMVLNVLNHNLPIPELNKTNISLIPKTNNPKRMTDFRPISLCNVVY 478

Query: 182  KIIAKYLVNRLKRALNEIIAPTQSTFVLGRMITDNAILGFKCLHAISSKRVGKDGWVALK 241
            K+I+K L NRLK  L  II+  QS F   R+ITDN ++ F+ +H +  K  GK+G++A+K
Sbjct: 479  KLISKILANRLKPLLPHIISENQSAFTSDRLITDNVLVAFELMHYLDHKTAGKEGFMAIK 538

Query: 242  LGMSKAYDTVEWPFLRAMLLSIGLDRAWVRILMRCVVTVQCPVLINCKPHHEFVPQRGLR 301
            L MSKA+D VEW F+  ++  +G    W  ++M+C+ +V   +LIN   H    P RGLR
Sbjct: 539  LDMSKAFDRVEWGFIAKVMEQMGFCNRWRDLVMQCITSVSYSILINGVAHGNIYPSRGLR 598

Query: 302  QGDPLSPYLFLICTEGLSALLHR-------------------------EESLSLIHASIF 361
            QGDPLSP LFL+C EGLSAL+++                         ++S+    A+  
Sbjct: 599  QGDPLSPSLFLLCAEGLSALINQAARNKLITGISINRGCPKVTHLFFADDSILFCKAAYE 658

Query: 362  ESKNIRKVLQEYEEVSGQMINLDKSECLFSKNVRQQLAIEINNVLGVRKTDSLGIYLG-- 421
            E   +R +L +YEE SGQ IN DKS   FS N  Q+   EI N+LG  +      YLG  
Sbjct: 659  ECHLLRSILGQYEEASGQKINTDKSSIFFSPNTAQETRDEIFNILGPMQNSRHTKYLGLP 718

Query: 422  ------------MLKE-----------KLFSLSGKETLIKAIAQAILIYMMSCFKLPYTV 481
                        MLKE           KL S+ GKE LIKA+AQAI  Y MSCF LP  +
Sbjct: 719  SLIGRSKSQVFAMLKEKVGHKLAGWKGKLLSMGGKEILIKAVAQAIPTYTMSCFLLPQGL 778

Query: 482  CDDLNR------------------ASGTSFVLVRMRGGLGLRDLQLFNQAMLAKQSSRIV 541
            CDD+ R                   S       +  GGLG R+L+ FN AMLAKQ+ RI+
Sbjct: 779  CDDMERMMKNFWWGQRNQETKMGWISWKRMCNSKASGGLGFRNLKAFNLAMLAKQAWRIL 838

Query: 542  KNSNSLLARVLKGRYFKDGDFCNALLGSNPSLTWRGILWGRELFLKGYRGRWEKG--IVL 601
             N NSL+ RVLK RYF  GD  NA LGS+PS +WR I    E+  +G R R   G  I +
Sbjct: 839  YNPNSLVGRVLKARYFPTGDLLNAKLGSSPSYSWRSIHSSLEVIRRGTRWRVGNGKQIHI 898

Query: 602  VDHR---TPICIN------GNLALMRVRDIINSDGS-WNFELIHNIFLPSDAKSIISVPR 661
             + R   TP           N     V  +I+ D   W  E + +IFLP + ++I+ +P 
Sbjct: 899  WEDRWLPTPSTYKVISPQIHNFEFPLVSSLIDPDTKWWKVEALRSIFLPFEVETILRIPL 958

Query: 662  RGIGGADEIIWGFDPNVCFSVKSAYNLAKSI----------------------------- 721
                  D++IW  +    FSVKSAY++A SI                             
Sbjct: 959  SYNLPEDKLIWIGNKKGEFSVKSAYHIAHSIIDPNERGECSNGDPYRLLWKKLWLLNLPG 1018

Query: 722  ----------TDSLPTLSNISKKGIATNPLCFFCRKFVESLSHVLWGCKFTKIIWL--SI 781
                       D LPT  NISK+GI  +  C  C    E ++H L  C+   ++W   S 
Sbjct: 1019 KIKIFAWRACVDGLPTYDNISKRGICCSSTCPICGLVTEDVNHALLYCEAASLVWCFWSD 1078

Query: 782  FPSLP-GFLSNFRD-----CWSPAGSCLD--------VWSYRNLLLHNGTPHVRNVLVDK 797
            +P  P     +F D     C S A   L+        +W  RN ++HN +P   + +   
Sbjct: 1079 YPETPQSHNGSFLDMALHLCHSKASQVLELFFVLSWAIWYNRNKIVHNDSPLSPSQVWLM 1138

[Close]
BLAST of Clc04G03990 vs. NCBI nr
Match: XP_023890148.1 (uncharacterized protein LOC112002224 [Quercus suber])

HSP 1 Score: 449.1 bits (1154), Expect = 8.8e-122
Identity = 289/872 (33.14%), Postives = 405/872 (46.44%), Query Frame = 0 

Query: 3    WKCRSREDWLKWGDRNTKVTNCKIS-----------KIPDHLQWGMNNPFSKEDIEMVVK 62
            W  R+   WLK GDRNT   + K S           K+  H+   +   F  E++   +K
Sbjct: 345  WHQRTHISWLKQGDRNTSFFHTKASSSEELIDAIHPKVSAHMNSFLTRDFRAEEVTRALK 404

Query: 63   GMGPYKAPGPDGVHAMFYQKYWDIVGQDTMRICLRILNEGENVGPLNKTLISLIPKVKKP 122
             M P  APGPDG+  +FYQ+YW  VG+      L  LN G      N+T I LIPKVK P
Sbjct: 405  QMFPTTAPGPDGMPPLFYQQYWPTVGKVITETVLDFLNVGITPQNFNETHIVLIPKVKDP 464

Query: 123  KHLSEFRPISLCNVSYKIIAKYLVNRLKRALNEIIAPTQSTFVLGRMITDNAILGFKCLH 182
            KH+ +FRPISLCNV+YK+ +K L NRLK  L  ++   QS FV  R+ITDN ++  + + 
Sbjct: 465  KHVQDFRPISLCNVAYKLASKILANRLKPFLPTLVCENQSAFVAERLITDNILVASETMF 524

Query: 183  AISSKRVGKDGWVALKLGMSKAYDTVEWPFLRAMLLSIGLDRAWVRILMRCVVTVQCPVL 242
             IS KR GK G +ALKL MSKAYD VEW  L  +++ +G    WV ++M+C+ TV   + 
Sbjct: 525  HISQKRKGKVGEMALKLDMSKAYDRVEWKCLEQIMVKLGFCERWVNLMMQCITTVSYSIR 584

Query: 243  INCKPHHEFVPQRGLRQGDPLSPYLFLICTEGLSALLHR--------------------- 302
            IN +P    +P RGLRQGDP+SPYLFLIC EGLSALLH+                     
Sbjct: 585  INGQPQGHIIPSRGLRQGDPISPYLFLICAEGLSALLHQAVQNRKLKGISVCRNGPRISH 644

Query: 303  ----EESLSLIHASIFESKNIRKVLQEYEEVSGQMINLDKSECLFSKNVRQQLAIEINNV 362
                ++SL    A++ E   I ++L+ YEE SGQ +N  K+   FS+N   +    I  +
Sbjct: 645  LFFADDSLIFGRATVAECSEITRILKVYEESSGQQLNKQKTSIFFSRNTDARTQGSIRTM 704

Query: 363  LGVRKTDSLGIYLGM-------------------------LKEKLFSLSGKETLIKAIAQ 422
            LG +       YLG+                          KEKL S +GKE LIKA+AQ
Sbjct: 705  LGAQVIRQHETYLGLPSLIGRSKTNSFAQLKEKVAKKVSGWKEKLLSAAGKEVLIKAVAQ 764

Query: 423  AILIYMMSCFKLPYTVCDDLNR------------------ASGTSFVLVRMRGGLGLRDL 482
            A+  Y MSCFKLP  +CDDL                     S       +  GG+G +DL
Sbjct: 765  AVPTYTMSCFKLPNAICDDLMGLVSQFWWGQKKEERKMVWLSWEKLCKPKDTGGMGFKDL 824

Query: 483  QLFNQAMLAKQSSRIVKNSNSLLARVLKGRYFKDGDFCNALLGSNPSLTWRGILWGRELF 542
            + FN A+LAKQ  R+    +SL  RV + +YF  G+F NA +G +PS  WR I+  +++ 
Sbjct: 825  KSFNLALLAKQGWRLQNCPSSLFTRVFRAKYFPTGEFVNAEMGKHPSFAWRSIMASQKIV 884

Query: 543  LKG-------------YRGRWEKGIVLVDHRTPICINGNLALMRVRDIINSDGSWNFELI 602
             KG             +R RW          TP  +  + A  +V+D+I   G W+  LI
Sbjct: 885  EKGMVWRVGNGENIKIWRDRWIPNPSTFRISTPPRLLSSDA--KVKDLIRGAGEWDSNLI 944

Query: 603  HNIFLPSDAKSIISVPRRGIGGADEIIWGFDPNVCFSVKSAYNLA--------------- 662
              +F P DA+ I+S+P       D+ IW    N  F+V SAY L                
Sbjct: 945  KQVFSPHDAEIILSIPLSLSLPPDKRIWSGTTNGKFTVSSAYKLISWGSENGGLGEPSDR 1004

Query: 663  ------------------------KSITDSLPTLSNISKKGIATNPLCFFCRKFVESLSH 722
                                    ++  D L + +N+ K+ I  + LC  C K  E+  H
Sbjct: 1005 ATMKLLWKTIWGMKTPNKVRAFTWRACKDILASKANLKKRHITNDDLCTSCNKAAETSGH 1064

Query: 723  VLWGCKFTKIIWLS---IFPSLPGFLSNFRD-CW-----SPAGS---------CLDVWSY 726
            + W C+  K +W S    FP       NF D  W     SP  S         C ++W  
Sbjct: 1065 MFWFCEKAKEVWSSSKMFFPFTIAGNWNFIDIIWNVMKHSPTDSGMMEKTAMICWEIWKN 1124

[Close]
BLAST of Clc04G03990 vs. NCBI nr
Match: XP_030923330.1 (uncharacterized protein LOC115950239 [Quercus lobata])

HSP 1 Score: 448.4 bits (1152), Expect = 1.5e-121
Identity = 297/915 (32.46%), Postives = 421/915 (46.01%), Query Frame = 0 

Query: 1    MYWKCRSREDWLKWGDRNTKVTNCKIS--------------------------------- 60
            +YW  RSR +WL+ GDRNTK  + K S                                 
Sbjct: 735  IYWAQRSRINWLRHGDRNTKFFHAKASQRRRKNFIRGIRNSQGQWVENLEEVGQVAADYF 794

Query: 61   ---------------------KIPDHLQWGMNNPFSKEDIEMVVKGMGPYKAPGPDGVHA 120
                                 K+ + ++  ++N F+ E+++  +  MGP KAPGPDG++A
Sbjct: 795  DNLFQAGAGDQMEECLDAVDTKVTEDMREFLSNQFTAEEVQAALFQMGPTKAPGPDGMNA 854

Query: 121  MFYQKYWDIVGQDTMRICLRILNEGENVGPLNKTLISLIPKVKKPKHLSEFRPISLCNVS 180
            +FYQK+W IVG   +   L  LN G  +  +N T I LIPKV+ P+ +SEFRPISLCNV 
Sbjct: 855  LFYQKFWHIVGDSVVSAVLDFLNNGNMLPEINHTNIVLIPKVQNPERMSEFRPISLCNVI 914

Query: 181  YKIIAKYLVNRLKRALNEIIAPTQSTFVLGRMITDNAILGFKCLHAISSKRVGKDGWVAL 240
            YKII+K L NRLK+ L +II+ TQS FV GR+ITDN ++ ++ LH + +++ GK G VAL
Sbjct: 915  YKIISKVLANRLKQVLPQIISSTQSAFVPGRLITDNVLVAYETLHTMHARKKGKKGDVAL 974

Query: 241  KLGMSKAYDTVEWPFLRAMLLSIGLDRAWVRILMRCVVTVQCPVLINCKPHHEFVPQRGL 300
            KL +SKAYD VEW FL++++  +G    W+  +M CV T    +L+N KP+    P RG+
Sbjct: 975  KLDISKAYDRVEWHFLQSIMEKMGFPAGWIERVMSCVTTPSFSILVNGKPYEMIQPSRGI 1034

Query: 301  RQGDPLSPYLFLICTEGLSALLHR-------------------------EESLSLIHASI 360
            RQGDP+SPYLFL+C EGL+ALL++                         ++SL    A+ 
Sbjct: 1035 RQGDPISPYLFLLCAEGLTALLNKAELNGMITGVSICRGAPKITNLMFADDSLLFCQATR 1094

Query: 361  FESKNIRKVLQEYEEVSGQMINLDKSECLFSKNVRQQLAIEINNVLGVRKTDSLGIYLGM 420
             E + I ++LQ YE  SGQ INL+KS   FS N  +    +I  +LGV++ D    YLG+
Sbjct: 1095 AEGETIAEILQIYERASGQSINLEKSSAYFSTNTSEGQKGQILEILGVKEVDRFVKYLGL 1154

Query: 421  --------------LKEK-----------LFSLSGKETLIKAIAQAILIYMMSCFKLPYT 480
                          LK++           L S +GKE LIKA+AQAI  Y MS F++P  
Sbjct: 1155 PTLIGRAKYNTFSELKDRVWKKLQGWKGMLLSRAGKEILIKAVAQAIPTYTMSVFQIPLK 1214

Query: 481  VCDDLNR------------------ASGTSFVLVRMRGGLGLRDLQLFNQAMLAKQSSRI 540
            +C +L                     S       +  GG+G RDL+ FN AMLAKQ  R+
Sbjct: 1215 LCSELEALCARFWWGQVGNERKIHWKSWDKLTAPKKEGGMGFRDLRAFNLAMLAKQGWRL 1274

Query: 541  VKNSNSLLARVLKGRYFKDGDFCNALLGSNPSLTWRGILWGRELFLKGYRGRWEKGI--- 600
            V+  +SLL R  K RYF    F  A    N S  WR ++  + +   GY  R   G    
Sbjct: 1275 VQGFDSLLYRCFKARYFPRSSFLEAKESPNCSFVWRSLMAAQPILQAGYCWRVGNGYSIN 1334

Query: 601  VLVDHRTPICINGNLALMRVRDIINSDGS--------------WNFELIHNIFLPSDAKS 660
             + D   P     N    +V + +  DGS              WN+E I  IF   +A++
Sbjct: 1335 AVKDRWLP-----NFPTNKVLNSVQRDGSEMLVAELINPEFNIWNYEEIRAIFHRDEAEA 1394

Query: 661  IISVPRRGIGGADEIIWGFDPNVCFSVKSAYNLAKSI-TDS------------------- 720
            I  +P       D I W + P   FSVKSAY++A+ I TD+                   
Sbjct: 1395 ICQIPLSRRHVPDSIFWLYGPRGLFSVKSAYHVARRILTDANRGGTSMGVVAKNIWSAIW 1454

Query: 721  -------------------LPTLSNISKKGIATNPLCFFCRKFVESLSHVLWGCKFTKII 722
                               LPT  N++ + I  +  C  C +  ES  H LW C   + I
Sbjct: 1455 KLRLPNKVKVFAWRACHEILPTAVNLTTRKIIHDDKCSICTRESESTVHALWDCAAVQDI 1514

[Close]
BLAST of Clc04G03990 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 447.2 bits (1149), Expect = 3.3e-121
Identity = 303/974 (31.11%), Postives = 446/974 (45.79%), Query Frame = 0 

Query: 1    MYWKCRSREDWLKWGDRNTKVTNCKIS-KIPDHLQWGMNN-------------------- 60
            ++ K RSR DWL+ GD+NTK  + K S +   +  WG+ N                    
Sbjct: 395  VFKKQRSRADWLREGDKNTKYFHAKASARKRKNKVWGIENDQGIWLKERDEIEEEICSHF 454

Query: 61   -----------------------------------PFSKEDIEMVVKGMGPYKAPGPDGV 120
                                               PF+ ED+E  +  M P KAPGPDG+
Sbjct: 455  QELFTTSSPTPSQIQATLQGMSAKVTPEMNVQLEKPFTAEDVEEALANMCPTKAPGPDGL 514

Query: 121  HAMFYQKYWDIVGQDTMRICLRILNEGENVGPLNKTLISLIPKVKKPKHLSEFRPISLCN 180
             A F+QK+W  V    +  CL +LNE  N   LN T I+LIPK+  P+ +S++RPISLCN
Sbjct: 515  PAAFFQKHWKSVRNGVISTCLNVLNEQGNPSTLNHTFIALIPKIANPRKVSDYRPISLCN 574

Query: 181  VSYKIIAKYLVNRLKRALNEIIAPTQSTFVLGRMITDNAILGFKCLHAISSKRVGKDGWV 240
            V Y+++AK + NR+K  L++II+P QS F+  R+ITDN I+G++CLH I   +  K+G V
Sbjct: 575  VIYRVVAKAIANRMKPILSQIISPMQSAFIPNRLITDNVIIGYECLHKIRHSKGKKNGLV 634

Query: 241  ALKLGMSKAYDTVEWPFLRAMLLSIGLDRAWVRILMRCVVTVQCPVLINCKPHHEFVPQR 300
            ALKL +SKAYD VEWPFL   +L +G     V ++MRCV +    VLIN  P     P+R
Sbjct: 635  ALKLDISKAYDRVEWPFLEQTMLKMGFPSHSVALIMRCVTSTSFSVLINGVPKGMIQPER 694

Query: 301  GLRQGDPLSPYLFLICTEGLSALLHREESLSLIHA-----------SIFESKNIRKVLQE 360
            GLRQG PLSPYLF++C E LS LL   E   LI              +F   ++      
Sbjct: 695  GLRQGCPLSPYLFILCAEALSNLLVVAEQNQLIRGLKFARDVSITHLLFADDSLIFSRAS 754

Query: 361  YEEVSGQMINLDKSEC--LFSKNV--RQQLAIEINNVLGVRKTDSLG-IYLGML------ 420
              E SG++    ++    +F+ NV  + +  + + +++G +K      I L +L      
Sbjct: 755  VAECSGKIPEHQRAAIRGIFNLNVVSKHEKYLGLPSMIGRKKMGFFNDIKLKVLNKIAGW 814

Query: 421  KEKLFSLSGKETLIKAIAQAILIYMMSCFKLPYTVCDDLNRA------------------ 480
            ++K  S  GKE LIKA AQAI  Y MS FKLP   CDD+ RA                  
Sbjct: 815  QQKFLSSGGKEVLIKAAAQAIPAYAMSVFKLPRGFCDDIQRAIAKFWWGSKGDKRGIHWR 874

Query: 481  SGTSFVLVRMRGGLGLRDLQLFNQAMLAKQSSRIVKNSNSLLARVLKGRYFKDGDFCNAL 540
                    ++RGGLG R+   FNQA++AKQ+ R+++  NSL++RVL+ RYF++  F  A 
Sbjct: 875  KWEKLSQAKIRGGLGFREFSCFNQALVAKQAWRLLQYPNSLVSRVLQARYFRNSSFLCAK 934

Query: 541  LGSNPSLTWRGILWGRELFLKGYR---GRWEKGIVLVDH-------RTPICINGNLALMR 600
             G+N S  WR I+WGR++  KG R   G  +K  +  D+         PI          
Sbjct: 935  AGANASYIWRSIMWGRQVIKKGMRWRIGNGKKIAIFSDNWLPRPETFRPIFPLSLPVSSV 994

Query: 601  VRDIINSDGSWNFELIHNIFLPSDAKSIISVPRRGIGGADEIIWGFDPNVCFSVKSAYNL 660
            V D+I +D  W+   +   FL  D   I+ +P       DE++W +D    +SVKS Y L
Sbjct: 995  VADLIKADNQWDEIKLRQHFLDVDTAEILKIPLPAEKAEDEVLWHYDKRGNYSVKSGYQL 1054

Query: 661  A------------------------------------KSITDSLPTLSNISKKGIATNPL 720
            A                                    ++  + LP+  N+ K+ +   P 
Sbjct: 1055 ALRSKFPDSTSCTEASHKYWSALWTLELPEKLKIFMWRASNNLLPSAENLWKRKVVEEPT 1114

Query: 721  CFFCRKFVESLSHVLWGCKFTKIIWLSIFPSLPGFLSNFRDCWSP--------------- 780
            C  C+  VE++SH L  CK  + IWL    S P   +N +D +S                
Sbjct: 1115 CKRCKLSVETISHALLECKAARKIWLQSPFSAPRLEANSQDIFSTLQNMAKELRKSDLEL 1174

Query: 781  -AGSCLDVWSYRNLLLHNGTPHVRNVLVDKIFAHVEEFCRGNSVEQGSLWRELTGGLEVW 798
                C   W  RN  + +G      +   K  + +  F R    +Q  +   +    + W
Sbjct: 1175 MVALCWSAWYARNKCIFDGRELNPIISAAKAESVLTAFQRVRKPQQSHISISIKEKQQEW 1234

[Close]
BLAST of Clc04G03990 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 2.9e-27
Identity = 113/440 (25.68%), Postives = 189/440 (42.95%), Query Frame = 0 

Query: 37  MNNPFSKEDIEMVVKGMGPYKAPGPDGVHAMFYQKYWDIVGQDTMRICLRILNEGENVGP 96
           +N P +  +I  ++  +   K+PGPDG  A FYQ+Y + +    +++   I  EG     
Sbjct: 449 LNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNS 508

Query: 97  LNKTLISLIPKVKKPKHLSE-FRPISLCNVSYKIIAKYLVNRLKRALNEIIAPTQSTFVL 156
             +  I LIPK  +     E FRPISL N+  KI+ K L NR+++ + ++I   Q  F+ 
Sbjct: 509 FYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIP 568

Query: 157 GRMITDNAILGFKCLHAISSKRVGKDGWVALKLGMSKAYDTVEWPFLRAMLLSIGLDRAW 216
           G     N       +  I+  R      V + +   KA+D ++ PF+   L  +G+D  +
Sbjct: 569 GMQGWFNIRKSINVIQHIN--RAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMY 628

Query: 217 VRILMRCVVTVQCPVLINCKPHHEFVPQRGLRQGDPLSPYLFLICTEGLSALLHREESLS 276
           ++I+          +++N +    F  + G RQG PLSP LF I  E L+  + +E+ + 
Sbjct: 629 LKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIK 688

Query: 277 LIHAS--------------------IFESKNIRKVLQEYEEVSGQMINLDKSECLFSKNV 336
            I                       I  ++N+ K++  + +VSG  IN+ KS+     N 
Sbjct: 689 GIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYNNN 748

Query: 337 RQ---QLAIEINNVLGVRKTDSLGIYLGMLKEKLFSLSGKETL----------------- 396
           RQ   Q+  E+   +  ++   LGI L    + LF  + K  L                 
Sbjct: 749 RQTESQIMGELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSW 808

Query: 397 ---IKAIAQAIL---IYMMSC--FKLPYTVCDDLNRASGTSFVLVRMR------------ 414
              I  +  AIL   IY  +    KLP T   +L + +   F+  + R            
Sbjct: 809 VGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTT-LKFIWNQKRARIAKSILSQKN 868

[Close]
BLAST of Clc04G03990 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 5.0e-27
Identity = 98/351 (27.92%), Postives = 163/351 (46.44%), Query Frame = 0 

Query: 37  MNNPFSKEDIEMVVKGMGPYKAPGPDGVHAMFYQKYWDIVGQDTMRICLRILNEGENVGP 96
           +N P S  +I   ++ +   K+PGPDG  + FYQ + + +    + +   I  EG     
Sbjct: 448 LNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNT 507

Query: 97  LNKTLISLIPKV-KKPKHLSEFRPISLCNVSYKIIAKYLVNRLKRALNEIIAPTQSTFVL 156
             +  I+LIPK  K P     +RPISL N+  KI+ K L NR+++ + +II   Q  F+ 
Sbjct: 508 FYEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIP 567

Query: 157 GRMITDNAILGFKCLHAISSKRVGKDGWVALKLGMSKAYDTVEWPFLRAMLLSIGLDRAW 216
           G     N       +  I +K   KD  + L +   KA+D ++ PF+   L  IG++  +
Sbjct: 568 GSQGWFNIRKSINVIQHI-NKLKNKDHMI-LSIDAEKAFDNIQHPFMIRTLKKIGIEGTF 627

Query: 217 VRILMRCVVTVQCPVLINCKPHHEFVPQRGLRQGDPLSPYLFLICTEGLSALLHREESLS 276
           ++++          +++N      F  + G RQG PLSP LF I  E L+  +  E+++ 
Sbjct: 628 LKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVLAIAIREEKAIK 687

Query: 277 LIHASIFESK--------------------NIRKVLQEYEEVSGQMINLDKSEC-LFSKN 336
            IH    E K                     + +V++EY  VSG  IN  KS   +++ N
Sbjct: 688 GIHIGSEEIKLSLFADDMIVYLENTRDSTTKLLEVIKEYSNVSGYKINTHKSVAFIYTNN 747

Query: 337 VRQQLAIE--INNVLGVRKTDSLGIYLGMLKEKLFSLSGKETLIKAIAQAI 364
            + +  ++  I   +  +K   LG+YL    + L+     ETL K IA+ +
Sbjct: 748 NQAEKTVKDSIPFTVVPKKMKYLGVYLTKDVKDLYK-ENYETLRKEIAEDV 795

[Close]
BLAST of Clc04G03990 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 7.2e-26
Identity = 81/276 (29.35%), Postives = 134/276 (48.55%), Query Frame = 0 

Query: 37  MNNPFSKEDIEMVVKGMGPYKAPGPDGVHAMFYQKYWDIVGQDTMRICLRILNEGENVGP 96
           +  P + +++   ++ M   K+PG DG+   F+Q +WD +G D  R+      +GE    
Sbjct: 445 LETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLS 504

Query: 97  LNKTLISLIPKVKKPKHLSEFRPISLCNVSYKIIAKYLVNRLKRALNEIIAPTQSTFVLG 156
             + ++SL+PK    + +  +RP+SL +  YKI+AK +  RLK  L E+I P QS  V G
Sbjct: 505 CRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPG 564

Query: 157 RMITDNAILGFKCLHAISSKRVGKDGWVALKLGMSKAYDTVEWPFLRAMLLSIGLDRAWV 216
           R I DN  L    LH   ++R G      L L   KA+D V+  +L   L +      +V
Sbjct: 565 RTIFDNVFLIRDLLH--FARRTGL-SLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFV 624

Query: 217 RILMRCVVTVQCPVLINCKPHHEFVPQRGLRQGDPLSPYLFLICTEGLSALLHREESLSL 276
             L     + +C V IN          RG+RQG PLS  L+ +  E    LL +      
Sbjct: 625 GYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPFLCLLRKR----- 684

Query: 277 IHASIFESKNIRKVLQEYEE----VSGQMINLDKSE 309
           +   + +  ++R VL  Y +    V+  +++L++++
Sbjct: 685 LTGLVLKEPDMRVVLSAYADDVILVAQDLVDLERAQ 712

[Close]
BLAST of Clc04G03990 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-25
Identity = 89/313 (28.43%), Postives = 147/313 (46.96%), Query Frame = 0 

Query: 31  DHLQWGMNNPFSKEDIEMVVKGMGPYKAPGPDGVHAMFYQKYWDIVGQDTMRICLRILNE 90
           DHL    N+P S ++IE V+  +   K+PGPDG  A FYQ + + +     ++  +I  E
Sbjct: 454 DHL----NSPISPKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVE 513

Query: 91  GENVGPLNKTLISLIPKVKK-PKHLSEFRPISLCNVSYKIIAKYLVNRLKRALNEIIAPT 150
           G       +  I+LIPK +K P  +  FRPISL N+  KI+ K L NR++  +  II P 
Sbjct: 514 GTLPNSFYEATITLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHPD 573

Query: 151 QSTFVLGRMITDNAILGFKCLHAISSKRVGKDGWVALKLGMSKAYDTVEWPFLRAMLLSI 210
           Q  F+ G     N       +H I+  ++     + + L   KA+D ++ PF+  +L   
Sbjct: 574 QVGFIPGMQGWFNIRKSINVIHYIN--KLKDKNHMIISLDAEKAFDKIQHPFMIKVLERS 633

Query: 211 GLDRAWVRILMRCVVTVQCPVLINCKPHHEFVPQRGLRQGDPLSPYLFLICTEGLSALLH 270
           G+   ++ ++          + +N +       + G RQG PLSPYLF I  E L+  + 
Sbjct: 634 GIQGPYLNMIKAIYSKPVANIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARAIR 693

Query: 271 REESLSLIHAS----------------IFESKN----IRKVLQEYEEVSGQMINLDKSEC 322
           +++ +  I                   I + KN    +  ++  + EV G  IN +KS  
Sbjct: 694 QQKEIKGIQIGKEEVKISLLADDMIVYISDPKNSTRELLNLINSFGEVVGYKINSNKSMA 753

[Close]
BLAST of Clc04G03990 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 4.8e-14
Identity = 49/125 (39.20%), Postives = 66/125 (52.80%), Query Frame = 0 

Query: 362 AILIYMMSCFKLPYTVCDDLNRASGTSF-----------------VLVRMR---GGLGLR 421
           A+ +Y MSCF+L   +C  L  A  T F                  L + +   GGLG R
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAM-TEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFR 61

Query: 422 DLQLFNQAMLAKQSSRIVKNSNSLLARVLKGRYFKDGDFCNALLGSNPSLTWRGILWGRE 467
           DL  FNQA+LAKQS RI+   ++LL+R+L+ RYF         +G+ PS  WR I+ GRE
Sbjct: 62  DLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRE 121

[Close]
BLAST of Clc04G03990 vs. ExPASy TrEMBL
Match: A0A2N9GM07 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28341 PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 9.1e-125
Identity = 318/1011 (31.45%), Postives = 456/1011 (45.10%), Query Frame = 0 

Query: 3    WKCRSREDWLKWGDRNTKVTNCKISK---------------------------------- 62
            WK R+R  WL  GD+NT+  + K S+                                  
Sbjct: 97   WKQRARVQWLMEGDKNTRYFHIKASQRRQRNEIKGLFTTTGVWVTNKYDIQHTVVEYFEQ 156

Query: 63   -----IPDHLQWG-----------MNNP----FSKEDIEMVVKGMGPYKAPGPDGVHAMF 122
                 +P H+Q G           MN+     F+ E++   ++ M P KAPGPDG+ A+F
Sbjct: 157  MFTTSMPSHVQEGVRAIQLKVTRAMNDQLCRNFTAEEVHQALQQMHPTKAPGPDGMSAVF 216

Query: 123  YQKYWDIVGQDTMRICLRILNEGENVGPLNKTLISLIPKVKKPKHLSEFRPISLCNVSYK 182
            +QKYW IVG++     L++LN   +    NKT I+LIPK K P+ ++EFRPISLCNV+YK
Sbjct: 217  FQKYWAIVGKEVTEEVLQVLNTNASAAAYNKTNIALIPKTKTPQRMTEFRPISLCNVTYK 276

Query: 183  IIAKYLVNRLKRALNEIIAPTQSTFVLGRMITDNAILGFKCLHAISSKRVGKDGWVALKL 242
            +I+K + NRLK  L+++I+ TQS FV GR ITDNA++ F+ +H    KR GKD ++ALKL
Sbjct: 277  LISKVIANRLKSVLSDLISETQSAFVPGRNITDNALVAFEIMHYFQQKRSGKDTYMALKL 336

Query: 243  GMSKAYDTVEWPFLRAMLLSIGLDRAWVRILMRCVVTVQCPVLINCKPHHEFVPQRGLRQ 302
             MSKAYD VEW F+  ++  +G    W+ ++M C+ TVQ  V +N       +P RGLRQ
Sbjct: 337  DMSKAYDRVEWVFIEQVMKKLGFCEKWISLIMNCITTVQYSVFVNGDTCGNIIPTRGLRQ 396

Query: 303  GDPLSPYLFLICTEGLSALLHREESLSLIH-------------------------ASIFE 362
            GDPLSPYLFL+C EG S+LL   E   LIH                         A+  +
Sbjct: 397  GDPLSPYLFLMCAEGFSSLLREAEDNHLIHGVSVCRGGPRVTHLFFADDSILFCKANNTD 456

Query: 363  SKNIRKVLQEYEEVSGQMINLDKSECLFSKNVRQQLAIEINNVLGVRKTDSLGIYLGM-- 422
             + +  + + YE+ SGQ IN+DKS   FS+N       EI       +      YLG+  
Sbjct: 457  CQQLLNIFETYEKASGQKINMDKSSIHFSRNTSMPRQSEIKAKFAEMRDAHPNKYLGLPT 516

Query: 423  -----------------------LKEKLFSLSGKETLIKAIAQAILIYMMSCFKLPYTVC 482
                                    KEKL S  G+E LIK++AQAI  Y MSCF+LP T+C
Sbjct: 517  IIGRSKSEVFKEIKVRLIRKLSGWKEKLLSYGGREILIKSVAQAIPTYAMSCFQLPQTLC 576

Query: 483  DDL----------NRASGTSFVLV--------RMRGGLGLRDLQLFNQAMLAKQSSRIVK 542
             ++           R   +   LV        ++RGG+G RDL  FN A+LAKQ  R++ 
Sbjct: 577  TEMEGLIRKFWWGQRGDESKMSLVGWKTLCTSKLRGGMGFRDLHAFNMALLAKQGWRLLH 636

Query: 543  NSNSLLARVLKGRYFKDGDFCNALLGSNPSLTWRGILWGRELFLKGYRGRWEKGI---VL 602
            N NS+L R+ K +YF  G+   A +G NPS  WR I    ++  +G R R   GI   + 
Sbjct: 637  NPNSMLYRLYKAKYFPTGNLFQAKIGHNPSYAWRSIWNAMKIVREGSRWRVGDGISINIW 696

Query: 603  VDHRTP-----------ICINGNLALMRVRDIINSDGSWNFELIHNIFLPSDAKSIISVP 662
             D   P           + I     +  + D I     W  E +H  FLP D  +I+S+P
Sbjct: 697  EDRWLPTPSTFKVITPQVDIGDTPQVSSLIDPITR--RWRLERLHQFFLPMDITAIMSIP 756

Query: 663  RRGIGGADEIIWGFDPNVCFSVKSAYNLAKSITDS------------------------- 722
               I   D+ +W  + N  F+VKSAY++A ++  S                         
Sbjct: 757  LGHIPTEDKRVWVGNNNGIFTVKSAYHIALNLQSSTTQEESSTGDPYRSLWKTIWHMKLP 816

Query: 723  --------------LPTLSNISKKGIATNPLCFFCRKFVESLSHVLWGCKFTKIIW---- 782
                          LPT+  + ++G+  NP C  C +  ES+SH +W C   + IW    
Sbjct: 817  SKIRIFAWRTCKQGLPTMEILQRRGLNVNPSCPRCNEGAESISHAIWECSKIREIWRLGD 876

Query: 783  -LSIFP-------------SLPGFLSNFRDCWSPAGSCLDVWSYRNLLLHNGTPHVRNVL 797
             L I P                G +      W  A    +VW  RN  +HN     +N +
Sbjct: 877  FLDILPVQVSDVREIILILMEKGLIGQLEFFWMVA---WNVWWDRNKRIHND----QNDI 936

[Close]
BLAST of Clc04G03990 vs. ExPASy TrEMBL
Match: A0A7N2L6Z9 (Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 4.5e-124
Identity = 330/1011 (32.64%), Postives = 472/1011 (46.69%), Query Frame = 0 

Query: 1    MYWKCRSREDWLKWGDRNTKVTNCKISK-------------------------------- 60
            ++W  RS+  WLK GDRNTK  + + S+                                
Sbjct: 213  IFWGQRSKVHWLKEGDRNTKFFHARASERRKQNTISGVWDKFGRWCEDRDSIANAAVTYF 272

Query: 61   ----------------------IPDHLQWGMNNPFSKEDIEMVVKGMGPYKAPGPDGVHA 120
                                  I + +   ++  F++E+I   +K + P K+PGPDG+ A
Sbjct: 273  EDIYSTSNPSMVDEVTAAIPTMITEEMNTELSRCFTREEIVTALKQIHPTKSPGPDGMSA 332

Query: 121  MFYQKYWDIVGQDTMRICLRILNEGENVGPLNKTLISLIPKVKKPKHLSEFRPISLCNVS 180
            +F+QKYWDIVG +   + L +LN G ++  +NKT I LIPK   PK +++FRPISLCNV 
Sbjct: 333  IFFQKYWDIVGSNVSNMILNVLNYGMSLDVINKTNIVLIPKTSNPKRMTDFRPISLCNVI 392

Query: 181  YKIIAKYLVNRLKRALNEIIAPTQSTFVLGRMITDNAILGFKCLHAISSKRVGKDGWVAL 240
            YK+I+K L NRLK  L  II   QS F   R+ITDN ++ ++ +H +  K+ GKD ++A 
Sbjct: 393  YKLISKTLANRLKAFLPLIITENQSAFTADRLITDNVLIAYELMHYLKHKKDGKDCFMAT 452

Query: 241  KLGMSKAYDTVEWPFLRAMLLSIGLDRAWVRILMRCVVTVQCPVLINCKPHHEFVPQRGL 300
            KL MSKA+D VEW F+  ++  +G +  W+ ++MRC+ +V   V+IN +     VP RGL
Sbjct: 453  KLDMSKAFDRVEWGFIERVMRKMGFNEGWISLIMRCISSVSYSVIINGEYFGNIVPTRGL 512

Query: 301  RQGDPLSPYLFLICTEGLSALLH-------------------------REESLSLIHASI 360
            RQGDPLSPYLFL+C EGLSALLH                          ++SL    A+ 
Sbjct: 513  RQGDPLSPYLFLLCAEGLSALLHDAARNQLLNGISLCRGCPRITHLFFADDSLLFCKANR 572

Query: 361  FESKNIRKVLQEYEEVSGQMINLDKSECLFSKNVRQQLAIEINNVLGVRKTDSLGIYLGM 420
             E + ++++L++YE  SGQ +N DKS   FS N   +L   I N+LG  +      YLG+
Sbjct: 573  EECEKLKEILEKYEAASGQKVNSDKSSIFFSPNTTPELKETIFNILGPMQDSRHNKYLGL 632

Query: 421  -------------------------LKEKLFSLSGKETLIKAIAQAILIYMMSCFKLPYT 480
                                      K KL S  GKE LIKA+AQAI  Y MSCF LP +
Sbjct: 633  PSIIGRSKKLVFAEIKERVGLKLAGWKGKLLSSGGKEILIKAVAQAIPTYTMSCFLLPKS 692

Query: 481  VCDDL------------NRASGTSFVLVRMR------GGLGLRDLQLFNQAMLAKQSSRI 540
            +CD+L            N+ S  +++  R        GGLG R+L  FN A+LAKQ+ RI
Sbjct: 693  LCDELEKMMRNFWWGQKNQESKVAWISWRKMCKPKSLGGLGFRNLHAFNLALLAKQAWRI 752

Query: 541  VKNSNSLLARVLKGRYFKDGDFCNALLGSNPSLTWRGILWGRELFLKGYRGRWEKG--IV 600
            + N  SL AR+LK +YF  GD  NA LGSNPS TWR I    E+  KG R R   G  I 
Sbjct: 753  LTNPGSLAARILKAKYFPYGDVLNASLGSNPSYTWRSIYNSLEVLKKGTRWRVGNGRRIH 812

Query: 601  LVDHR-----------TPICINGNLALMRVRDIINSDGS-WNFELIHNIFLPSDAKSIIS 660
            + D +           TP  I  +  +  V  +I+ D   W  + I  +FLP DA++I+ 
Sbjct: 813  IWDDKWLPSPSTYKVITPPRITEDYPM--VSSLIDPDTRWWKIDSIRALFLPVDAEAILK 872

Query: 661  VPRRGIGGADEIIWGFDPNVCFSVKSAYNLAKSITDS----------------------- 720
            +P       D IIW  +    FSVKSAY +A ++ +S                       
Sbjct: 873  IPLSFNLPDDRIIWIGNKKGEFSVKSAYFVAVNLLESAEIVECSSGDPFLPLWKNLWKLD 932

Query: 721  ----------------LPTLSNISKKGIATNPLCFFCRKFVESLSHVLWGCKFTKIIWLS 780
                            LPT++N+  +G+  N  C  C + VE L+H L  C F   +W +
Sbjct: 933  LPEKVKIFAWRACLNGLPTMANMHMRGLNANIFCPVCDEEVECLNHCLLTCDFALSVW-A 992

Query: 781  IFPSLP-GFLSNFRD---------CWSPAGSCL-------DVWSYRNLLLHNG---TPHV 797
            ++   P G L   RD           SP    L        +W  RNL +H+    +P  
Sbjct: 993  LWQDCPLGLLLESRDIKALALHFLANSPPRHLLIFFAISWAIWHNRNLRVHDEDCLSPLQ 1052

[Close]
BLAST of Clc04G03990 vs. ExPASy TrEMBL
Match: A0A2N9FNH6 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16381 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 1.3e-123
Identity = 299/912 (32.79%), Postives = 440/912 (48.25%), Query Frame = 0 

Query: 40   PFSKEDIEMVVKGMGPYKAPGPDGVHAMFYQKYWDIVGQDTMRICLRILNEGENVGPLNK 99
            PF+ E+I   +  M P KAPGPDG++AMFYQK+W IVG D     L  L+ G+ +  +N 
Sbjct: 556  PFTSEEIRSALFQMHPTKAPGPDGMNAMFYQKFWHIVGDDVTNAVLEFLHSGKMLKSVNF 615

Query: 100  TLISLIPKVKKPKHLSEFRPISLCNVSYKIIAKYLVNRLKRALNEIIAPTQSTFVLGRMI 159
            T I+LIPK+  P+ +++FRPISLCNV YKII+K L NRLK  L+ II+  QS FV GR+I
Sbjct: 616  THITLIPKIPSPELMTQFRPISLCNVLYKIISKVLANRLKTVLDHIISDNQSAFVPGRLI 675

Query: 160  TDNAILGFKCLHAISSKRVGKDGWVALKLGMSKAYDTVEWPFLRAMLLSIGLDRAWVRIL 219
            TDN ++ F+ LH + +KR G+   +A+KL MSKAYD VEW FL  M++ +G D+ WV ++
Sbjct: 676  TDNILVAFEALHYMKTKRKGRSTHMAVKLDMSKAYDRVEWNFLENMMMKLGFDQRWVNLI 735

Query: 220  MRCVVTVQCPVLINCKPHHEFVPQRGLRQGDPLSPYLFLICTEGLSALLHR--------- 279
            M+C+ +V   V++N +P     P RG+RQGDPLSPYLFLIC EGL+ALL +         
Sbjct: 736  MQCLTSVSYSVMLNGEPTGYIKPTRGIRQGDPLSPYLFLICAEGLTALLQQAERSGIVQG 795

Query: 280  ----------------EESLSLIHASIFESKNIRKVLQEYEEVSGQMINLDKSECLFSKN 339
                            ++SL    A++ E +N+  +L  YE+ SGQ +N +K+   FS N
Sbjct: 796  LSICRGGPQISHLFFADDSLLFCRANMIECQNLLAILDTYEQASGQKLNHEKTSLFFSTN 855

Query: 340  VRQQLAIEINNVLGVRKTDSLGIYLGM-------------------------LKEKLFSL 399
                L   I  +L    T  LG YLG+                          K KL S 
Sbjct: 856  THPDLRHSICTLLRTSSTGDLGKYLGLPPIIGRGKKQAFMEIKQKIAKKLHGWKGKLLSQ 915

Query: 400  SGKETLIKAIAQAILIYMMSCFKLPYTVCDDLNR------------------ASGTSFVL 459
            +G+E LIK++AQAI +Y MSCF++P T+C ++N                      ++   
Sbjct: 916  AGREILIKSVAQAIPVYTMSCFRIPDTLCSEINSMVSKFWWGQKAEEKKIHWQKWSNMCR 975

Query: 460  VRMRGGLGLRDLQLFNQAMLAKQSSRIVKNSNSLLARVLKGRYFKDGDFCNALLGSNPSL 519
             +  GG+G RDL LFNQA+LAKQ  R++++ N+LL R+LK +YF +  F  A +  + S 
Sbjct: 976  KKSEGGMGFRDLTLFNQALLAKQGWRLLQHPNTLLHRLLKAKYFPNCSFMEADIPDHASF 1035

Query: 520  TWRGILWGRELFLKGYRGRWEKGIVL----------------VDHRTPICINGNLALMRV 579
             WR I   R +  KG R R   G  +                V  R  +  N       V
Sbjct: 1036 AWRSIAQSRHIIRKGTRWRIGNGTQVNIWRDKWISPTNPSKSVSQRQILPANAT-----V 1095

Query: 580  RDIINSD-GSWNFELIHNIFLPSDAKSIISVPRRGIGGADEIIWGFDPNVCFSVKSAYNL 639
             D+I+ +   WN  LI +IF P +A  I ++P R +   D ++W   PN  F+ +SAY L
Sbjct: 1096 SDLIDHETRQWNSSLIDSIFWPCEAAQIKAIPLR-LHHPDILVWTGTPNGRFTTRSAYML 1155

Query: 640  A--------------------------------------KSITDSLPTLSNISKKGIATN 699
                                                   ++ T  LPT +N+ ++G+  +
Sbjct: 1156 QLEEKTQIQGSSSDKSRLHAFWKALWRVTVPSKIKTFMWRACTSILPTKTNLFRRGVVHS 1215

Query: 700  PLCFFCRKFVESLSHVLWGCKFTKIIWLS---------IFPSLPGFLSNF--RDCWSPAG 759
              C  C    E++ H LW C++ +  WL+         + PS    L ++  R   +P  
Sbjct: 1216 YYCPVCNDHAETVLHSLWDCEYAQTAWLNSSVSPLLSLVRPSSWDDLVDYVIRHLKTPEV 1275

Query: 760  SCL-----DVWSYRNLLLHNGTPHVRNVLVDKIFAHVEEFCRGNSVEQGSLWRELTGGLE 794
                     +W+YRN    N        L  K  ++VEEF   N+         +T    
Sbjct: 1276 ELFFTLAWMIWAYRNATWLNNPRSDAISLSSKATSYVEEFLDSNNRAD----HPITNNPP 1335

[Close]
BLAST of Clc04G03990 vs. ExPASy TrEMBL
Match: A0A2N9FN47 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16564 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 2.3e-123
Identity = 296/836 (35.41%), Postives = 413/836 (49.40%), Query Frame = 0 

Query: 20   KVTNCKISKIPDHLQWGMNNPFSKEDIEMVVKGMGPYKAPGPDGVHAMFYQKYWDIVGQD 79
            +VT    +++   +   + +PFS E+I+  +  M P KAPGPDG+ A+F+QKYW++VG  
Sbjct: 845  EVTQLVDARVTPEMNSSLLSPFSSEEIKSALFQMSPSKAPGPDGMTALFFQKYWNVVGVH 904

Query: 80   TMRICLRILNEGENVGPLNKTLISLIPKVKKPKHLSEFRPISLCNVSYKIIAKYLVNRLK 139
                 L  LN G  +G +N T I LIPKVK P +++ FRPISLCNV YKII+K LVNR+K
Sbjct: 905  VTEAVLDCLNSGRLLGSINFTNIVLIPKVKAPVNMAHFRPISLCNVIYKIISKVLVNRMK 964

Query: 140  RALNEIIAPTQSTFVLGRMITDNAILGFKCLHAISSKRVGKDGWVALKLGMSKAYDTVEW 199
              L+++I+ +QS FV GRMITDN ++ F+ LH + +KR GK G +A KL MSKAYD VEW
Sbjct: 965  NLLSDVISYSQSAFVPGRMITDNILVSFEMLHYLKNKRGGKVGQMAAKLDMSKAYDRVEW 1024

Query: 200  PFLRAMLLSIGLDRAWVRILMRCVVTVQCPVLINCKPHHEFVPQRGLRQGDPLSPYLFLI 259
             +LRA+LL +G    WV ++M CV +V   VL+N +      P RGLRQGDPLSPYLFLI
Sbjct: 1025 DYLRAILLKLGFHERWVSLIMMCVSSVSYSVLVNGEQKGFIKPGRGLRQGDPLSPYLFLI 1084

Query: 260  CTEGLSALLHREESLSLIH-------------------------ASIFESKNIRKVLQEY 319
            C EGLSALL + E   LIH                         A+  + + +  +L  Y
Sbjct: 1085 CAEGLSALLRKAEVDRLIHGISICRGSPRVSHLFFADDSIIFCNATTSDCQALLYLLTIY 1144

Query: 320  EEVSGQMINLDKSECLFSKNVRQQLAIEINNVLGVRKTDSLGIYLGM------------- 379
            E+ SGQ +N  K+   FS N  Q     I  + G   T     YLG+             
Sbjct: 1145 EDASGQKVNSSKTALFFSHNTTQDSRDIILQLFGTTATTQFEKYLGLPPVIGRAKKRAFN 1204

Query: 380  ------------LKEKLFSLSGKETLIKAIAQAILIYMMSCFKLPYTVCDDLNR------ 439
                         KEKL S +G+E LIKA+ QAI  Y MSCFKLP  +C +++       
Sbjct: 1205 DLKDRVGRRLQGWKEKLLSQAGREILIKAVIQAIPTYAMSCFKLPLGLCSEISSMTMKYW 1264

Query: 440  ------------ASGTSFVLVRMRGGLGLRDLQLFNQAMLAKQSSRIVKNSNSLLARVLK 499
                         S       + RGG+G R+L LFN AMLA+Q  R+++  NSLL RVLK
Sbjct: 1265 WGQRGMERKVHWLSKQQLYHAKDRGGMGFRELSLFNSAMLARQGWRLIQFPNSLLCRVLK 1324

Query: 500  GRYFKDGDFCNALLGSNPSLTWRGILWGRELFLKGYRGR---------WEKGIVLVDHRT 559
             +YF +  F  A +  NPSLTWR I   +++ + G   R         W K   L+    
Sbjct: 1325 AKYFPNQSFLEASVKGNPSLTWRSICGAKQVLVDGLIWRVGTGENIRIW-KDSWLMGSPC 1384

Query: 560  PICINGNLAL---MRVRDIINSD-GSWNFELIHNIFLPSDAKSIISVPRRGIGGADEIIW 619
            P  ++    L     V ++IN + G WN  LI  IFLPSDA+ I  +P       D++IW
Sbjct: 1385 PKILSAPRVLEANATVAELINHEQGCWNSLLIDQIFLPSDAEIIKQIPLSSRRPQDKLIW 1444

Query: 620  GFDPNVCFSVKSAYNL----AKSITDS--------------------------------- 679
              +    FSVK+AY L    A  IT+S                                 
Sbjct: 1445 AGNRKGVFSVKNAYRLLLQKANVITESSSAGSLTKFWNGVWSAKVQPKIRNFIWRACRNI 1504

Query: 680  LPTLSNISKKGIATNPLCFFCRKFVESLSHVLWGCKFTKIIWLSIFPSLP------GFLS 722
            LPT + +  K I+++  C +C    E+  H+LW C F + +W +    +P      G  S
Sbjct: 1505 LPTQTKLFDKKISSSFSCRWCEDEPETGDHILWRCDFAQRVWSACSVPIPSGVDVTGSFS 1564

[Close]
BLAST of Clc04G03990 vs. ExPASy TrEMBL
Match: A0A2N9GWG4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31631 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 2.3e-123
Identity = 296/836 (35.41%), Postives = 413/836 (49.40%), Query Frame = 0 

Query: 20   KVTNCKISKIPDHLQWGMNNPFSKEDIEMVVKGMGPYKAPGPDGVHAMFYQKYWDIVGQD 79
            +VT    +++   +   + +PFS E+I+  +  M P KAPGPDG+ A+F+QKYW++VG  
Sbjct: 845  EVTQLVDARVTPEMNSSLLSPFSSEEIKSALFQMSPSKAPGPDGMTALFFQKYWNVVGVH 904

Query: 80   TMRICLRILNEGENVGPLNKTLISLIPKVKKPKHLSEFRPISLCNVSYKIIAKYLVNRLK 139
                 L  LN G  +G +N T I LIPKVK P +++ FRPISLCNV YKII+K LVNR+K
Sbjct: 905  VTEAVLDCLNSGRLLGSINFTNIVLIPKVKAPVNMAHFRPISLCNVIYKIISKVLVNRMK 964

Query: 140  RALNEIIAPTQSTFVLGRMITDNAILGFKCLHAISSKRVGKDGWVALKLGMSKAYDTVEW 199
              L+++I+ +QS FV GRMITDN ++ F+ LH + +KR GK G +A KL MSKAYD VEW
Sbjct: 965  NLLSDVISYSQSAFVPGRMITDNILVSFEMLHYLKNKRGGKVGQMAAKLDMSKAYDRVEW 1024

Query: 200  PFLRAMLLSIGLDRAWVRILMRCVVTVQCPVLINCKPHHEFVPQRGLRQGDPLSPYLFLI 259
             +LRA+LL +G    WV ++M CV +V   VL+N +      P RGLRQGDPLSPYLFLI
Sbjct: 1025 DYLRAILLKLGFHERWVSLIMMCVSSVSYSVLVNGEQKGFIKPGRGLRQGDPLSPYLFLI 1084

Query: 260  CTEGLSALLHREESLSLIH-------------------------ASIFESKNIRKVLQEY 319
            C EGLSALL + E   LIH                         A+  + + +  +L  Y
Sbjct: 1085 CAEGLSALLRKAEVDRLIHGISICRGSPRVSHLFFADDSIIFCNATTSDCQALLYLLTIY 1144

Query: 320  EEVSGQMINLDKSECLFSKNVRQQLAIEINNVLGVRKTDSLGIYLGM------------- 379
            E+ SGQ +N  K+   FS N  Q     I  + G   T     YLG+             
Sbjct: 1145 EDASGQKVNSSKTALFFSHNTTQDSRDIILQLFGTTATTQFEKYLGLPPVIGRAKKRAFN 1204

Query: 380  ------------LKEKLFSLSGKETLIKAIAQAILIYMMSCFKLPYTVCDDLNR------ 439
                         KEKL S +G+E LIKA+ QAI  Y MSCFKLP  +C +++       
Sbjct: 1205 DLKDRVGRRLQGWKEKLLSQAGREILIKAVIQAIPTYAMSCFKLPLGLCSEISSMTMKYW 1264

Query: 440  ------------ASGTSFVLVRMRGGLGLRDLQLFNQAMLAKQSSRIVKNSNSLLARVLK 499
                         S       + RGG+G R+L LFN AMLA+Q  R+++  NSLL RVLK
Sbjct: 1265 WGQRGMERKVHWLSKQQLYHAKDRGGMGFRELSLFNSAMLARQGWRLIQFPNSLLCRVLK 1324

Query: 500  GRYFKDGDFCNALLGSNPSLTWRGILWGRELFLKGYRGR---------WEKGIVLVDHRT 559
             +YF +  F  A +  NPSLTWR I   +++ + G   R         W K   L+    
Sbjct: 1325 AKYFPNQSFLEASVKGNPSLTWRSICGAKQVLVDGLIWRVGTGENIRIW-KDSWLMGSPC 1384

Query: 560  PICINGNLAL---MRVRDIINSD-GSWNFELIHNIFLPSDAKSIISVPRRGIGGADEIIW 619
            P  ++    L     V ++IN + G WN  LI  IFLPSDA+ I  +P       D++IW
Sbjct: 1385 PKILSAPRVLEANATVAELINHEQGCWNSLLIDQIFLPSDAEIIKQIPLSSRRPQDKLIW 1444

Query: 620  GFDPNVCFSVKSAYNL----AKSITDS--------------------------------- 679
              +    FSVK+AY L    A  IT+S                                 
Sbjct: 1445 AGNRKGVFSVKNAYRLLLQKANVITESSSAGSLTKFWNGVWSAKVQPKIRNFIWRACRNI 1504

Query: 680  LPTLSNISKKGIATNPLCFFCRKFVESLSHVLWGCKFTKIIWLSIFPSLP------GFLS 722
            LPT + +  K I+++  C +C    E+  H+LW C F + +W +    +P      G  S
Sbjct: 1505 LPTQTKLFDKKISSSFSCRWCEDEPETGDHILWRCDFAQRVWSACSVPIPSGVDVTGSFS 1564

[Close]
BLAST of Clc04G03990 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 5.5e-21
Identity = 77/318 (24.21%), Postives = 128/318 (40.25%), Query Frame = 0 

Query: 362 AILIYMMSCFKLPYTVCDDL------------NRASGTSF------VLVRMRGGLGLRDL 421
           A+  Y M+CF LP TVC  +              A G  +         +  GG+G +D+
Sbjct: 2   ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61

Query: 422 QLFNQAMLAKQSSRIVKNSNSLLARVLKGRYFKDGDFCNALLGSNPSLTWRGILWGRELF 481
           + FN A+L KQ  R++    SL+A+V K RYF   D  NA LGS PS  W+ I   +E+ 
Sbjct: 62  EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121

Query: 482 LKGYRGRWEKG--IVLVDHR----------------TPICINGNLALMRVRDIINSDG-S 541
            +G R     G  I++  H+                 P       ++++V D+I+  G  
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGRE 181

Query: 542 WNFELIHNIFLPSDAKSIISVPRRGIGGADEIIWGFDPNVCFSVKSAY------------ 601
           W  ++I  +F   + K I  +   G    D   W +  +  ++VKS Y            
Sbjct: 182 WRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSS 241

Query: 602 ---------------------------NLAKSITDSLPTLSNISKKGIATNPLCFFCRKF 604
                                       L K +++SLP    ++ + ++    C  C   
Sbjct: 242 PQEVSEPSLNPIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSC 301

[Close]
BLAST of Clc04G03990 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 81.6 bits (200), Expect = 3.4e-15
Identity = 49/125 (39.20%), Postives = 66/125 (52.80%), Query Frame = 0 

Query: 362 AILIYMMSCFKLPYTVCDDLNRASGTSF-----------------VLVRMR---GGLGLR 421
           A+ +Y MSCF+L   +C  L  A  T F                  L + +   GGLG R
Sbjct: 2   ALPVYAMSCFRLSKLLCKKLTSAM-TEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFR 61

Query: 422 DLQLFNQAMLAKQSSRIVKNSNSLLARVLKGRYFKDGDFCNALLGSNPSLTWRGILWGRE 467
           DL  FNQA+LAKQS RI+   ++LL+R+L+ RYF         +G+ PS  WR I+ GRE
Sbjct: 62  DLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRE 121

[Close]
BLAST of Clc04G03990 vs. TAIR 10
Match: AT4G20520.1 (RNA binding;RNA-directed DNA polymerases )

HSP 1 Score: 71.2 bits (173), Expect = 4.6e-12
Identity = 32/88 (36.36%), Postives = 52/88 (59.09%), Query Frame = 0 

Query: 134 LVNRLKRALNEIIAPTQSTFVLGRMITDNAILGFKCLHAISSKRVGKDGWVALKLGMSKA 193
           +V RLK  +  +I P Q++F+ GR+ TDN +   + +H++  K+ G  GW+ LKL + KA
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKK-GVKGWMLLKLDLEKA 60

Query: 194 YDTVEWPFLRAMLLSIGLDRAWVRILMR 222
           YD + W +L   L+S G    W+  + R
Sbjct: 61  YDRIRWDYLEDTLISAGFPEVWLPEIAR 87

[Close]
BLAST of Clc04G03990 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-10
Identity = 36/89 (40.45%), Postives = 45/89 (50.56%), Query Frame = 0 

Query: 42  SKEDIEMVVKGMGPYKAPGPDGVHAMFYQKYWDIVGQDTMRICLRILNEGENVGPLNKTL 101
           S ++I   V  M   KAPGPD   A F+ + W +V   T+         G  +   N T 
Sbjct: 532 SDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATA 591

Query: 102 ISLIPKVKKPKHLSEFRPISLCNVSYKII 131
           I+LIPKV     LS FRP+S C V YKII
Sbjct: 592 ITLIPKVTGVDQLSMFRPVSCCTVVYKII 620

[Close]
BLAST of Clc04G03990 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-07
Identity = 25/42 (59.52%), Postives = 29/42 (69.05%), Query Frame = 0 

Query: 231 LINCKPHHEFVPQRGLRQGDPLSPYLFLICTEGLSALLHREE 273
           +IN  P     P RGLRQGDPLSPYLF++CTE LS L  R +
Sbjct: 13  IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQ 54

The following BLAST results are available for this feature:
BLAST of Clc04G03990 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_006491472.17.6e-13431.63uncharacterized protein LOC102626455 [Citrus sinensis][more]
XP_023878301.19.7e-12932.87uncharacterized protein LOC111990748 [Quercus suber][more]
XP_023890148.18.8e-12233.14uncharacterized protein LOC112002224 [Quercus suber][more]
XP_030923330.11.5e-12132.46uncharacterized protein LOC115950239 [Quercus lobata][more]
XP_024950112.13.3e-12131.11uncharacterized protein LOC112496847 [Citrus sinensis][more]
BLAST of Clc04G03990 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O003702.9e-2725.68LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1[more]
P085485.0e-2727.92LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1[more]
P143817.2e-2629.35Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
P113692.7e-2528.43LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... [more]
P932954.8e-1439.20Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Clc04G03990 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2N9GM079.1e-12531.45Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A7N2L6Z94.5e-12432.64Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 ... [more]
A0A2N9FNH61.3e-12332.79Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9FN472.3e-12335.41Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16564 PE=4 SV=1[more]
A0A2N9GWG42.3e-12335.41Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS31631 PE=4 SV=1[more]
BLAST of Clc04G03990 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G29090.15.5e-2124.21Ribonuclease H-like superfamily protein [more]
ATMG00310.13.4e-1539.20RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT4G20520.14.6e-1236.36RNA binding;RNA-directed DNA polymerases [more]
AT1G43760.13.3e-1040.45DNAse I-like superfamily protein [more]
ATMG01250.11.2e-0759.52RNA-directed DNA polymerase (reverse transcriptase) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 110..271
e-value: 5.1E-27
score: 94.8
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 547..603
e-value: 1.0E-7
score: 32.6
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 694..796
e-value: 1.0E-6
score: 28.5
NoneNo IPR availablePANTHERPTHR19446:SF440SUBFAMILY NOT NAMEDcoord: 31..547
NoneNo IPR availablePANTHERPTHR19446REVERSE TRANSCRIPTASEScoord: 31..547
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 99..342
e-value: 6.20194E-38
score: 139.349
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 692..794
e-value: 9.50463E-10
score: 55.398
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 50..271
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 689..797

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc04G03990.1Clc04G03990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity