Clc04G01590 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G01590
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	NAC domain-containing protein
Location	ClcChr04: 4841374 .. 4847693 (-)
RNA-Seq Expression	Clc04G01590
Synteny	Clc04G01590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTTCAATCGGTTGTTTAACATTGTCATTGAACCATTACGTGGGCGTCAAATTTACGTCTACCGATCAGCAACTTCTTCATTATCTTCATTATAAGACTTATGACCTCCCGTATTTTCAAGGTAGTGTTTTCGACTTTGATCTTTATGGTGGAACCGAGCCATGGAAAATCTGGCAACTTTTTGAAGTCATTGAGGGGGAAGATCTCTACTTCTTCACCAAACTCAAGAGATCTATAACAAACTCTGGACGTTTATTGGTGCACATTAACCGCAAGATTGGCTTGGCCAATGCCACTTGGAGTGGTGAGAATTCACCAACTCCAATTTTTGCAATGATGCTGAAGAACAAATAATCGGATATAGCAAGCGCTTTAGGTGAGTTATTTGGTTTTAGTTTTTGTCAAAATTGCTTTCAATATATATTCAATCATCGATAAACTTGGAGAGCTGGATTTAAATTTTGCTATATATTCCTACAAATTGTTTTGCATTGAATTATATATGCTAATACCTTGGATATGACTACAATATTTGCAACGATGCCTTTTTAAATTGTGTGTTTTTTTTTCCTTGGAAACTTTAAGTTGTAAGGAAGTTTTTATGGATATTACTTCATTTGGTATTTTAAAATAAATGATATACTTTTGTAAATTTTAGGTATGAGAATGAGCAATTGCAAGAACACCATGGAGAATGGATAATGTAAGCCCCGTACCTAATTTTGTGAGAACGCAAGGTAAGAAGGGAGCCGAGAGATGGATGATTGGGTAAGAATAGTTGGCTGGATTGTGATTGGGGCGGAAAAATGACTAAGTGTTAGCTATGCGTTGATGGCAACATGTTTTGATGGAAACAGTTTTGGTGTAAACGCAAAGGTGAGGGAAAACTATTATGCGTTGAAGTCATGATGCGTTGAGGACATAAGGCGTGGAGAATCACCTTGTACTGAAGATTATCATGCGGCAAACGCATTGAAGGCAGTGTGCCGTTGGAAGTAATGGCCACGAGGAGTTGGGAGCTGATTTGCGATGAGGCTATTATGCGGTGAACGCTACCATGCGTCGAACGTGGGTATGCGTTGGACAAAGAAGGTTGGCCGAGAGAGAGTAATGCGTTTGCTAACCATTTGGCGGGAGAGTTTTGAAAAGAAACATCATCAGAGGCTGTGTGCGTTGCTGAAGCTGAACATAGAAGGTATGCGTTGAACAGATTATAGTATAGTGTTGAAATGGAGAATAAGTCGGTGCTATATATATAAGTGGATTGAGAATTCAATTGTTCTGATTGCATTCCAGAGCTCGAGTTGGGACCATACTAAGGCGAAACATCGGAAGGAGGTAGAAGAAGATGTTCATGCTGATTTGAAGTGGAAATCTCATCGTAACCGTGGAAGAAACTTGAGTTTGGCAGAGGATTCAGCTGGTGTTACTCCCTCAGAGTGATGCTCAGTTTTGGAGGGAGAACAAATTGAACAAAAGGTGGTTAGGGTTGAAACTTTGAGGTTAGTAAGTTAACTCGATTTTTAGCAAGTTTCATGAAGGATGCTTGAGCTAAAATTGTATAAATGTGTGTCAAACTCAGGAAGAAGAGATTAGAGTTGAATTGCCGGACGATTAGGGGTAACTCGGAGTTGTTGAAGGATATATCCTAAACGGAGAGGATGTTCTTCATGAAATTTGGAGGTAAGATGAAGGACCTGTACCTTAACAAGTTTGTAGAAGGAAGAAGGTACTGAAATTGACCGAAACGAAATGTTTAGCAGGTTGAAGAAGGAAGAAGAAAGGAAGAAGAAAACGGTTCTGCTGCAACGGTAGTATCGCTGAGAGAGCGAGAGACAGGACAGCGAAGCAAGTATCGCTGCAACACAAGATAGGCTTTGCGTCTCACGATTCTCGCTAGAGTATCGCTGGGTGTCGCTCCTCAGGTAAACTCGCTGGTTACATTCAACGCAGTGTCGCTGGTACAGTAGTGTGTGATGAGTAACGCTGGCAGCTTTTAATTTTCTAAAGAGTAACGCTATTATTGTGTGTTAAAGAAAAGGGAGATTATGGAAACTAAACATGAGGAATATGTGTTTTCAGGCCAGGAAGAGCTCGGGGAGGCTTATAATCCACTTAGAGCCGAGACCAATTGTGAGTGATTATTTGTTATATCTTGTGATAAATTTAGTATGCTTATTTGATGAGGAAATGTGATCCTTTATAGCAATCATTATGAATGTGATGTGTTAGTAAGGTAAAAGAGTACTAATGCTAATGTTTAGATATAATAGTGGCTGAGGGACATTATGGTGAAAGCTTATATGTAGATAAGCATGAAGTTTAGTGCTGAGGGACTTTGTGAAGGCACTTGAATAGTTATAAAGAAATGGATCACAATGCTCAGGGACTATGAGTGAAGGCATGTAGTAATCCATCACACACTAGCTCGTGCTGAGGGATCATGGGTGAAGGCACTTGAGCAAAGATAGAATTGGTTACCAGTGCTGAGGGATTTCATGTGAAGGCACATGGTAACGTAAATACAATTGAATAAGTGCTGAGGGACGGAATGTGAAGGCACTAAACTGTGAAACATGAGAACTTGATAGTTGTATGTGTAATTAAGAAAGAGAATCTTAGAAATTCTTTGGGGTGTGATACGTAATAGTTACTGATAGACAAACTGGCTCATATTTGTTAAGAATAGTTAGTGGATTTAGTCACTCACTGAGCTTTCTACTCATTCAGTTTGTTGTTGTTTGTTGTTTCAGGTAGCGAGCGTGTCTGGGACGCCTAGCCTACAGAAGAAACTCGTATGGGCCTATCTGGAAGCGAACCTCTGGGATAGTTGTAAATATTTAGACTGTACATATATCTTGTAATATGCATATTTCTTAGAGGAGAAAGGGGGATGTGTTGTACCTTATATGTGTATATGCAGAAATGCTTGTTGTGAGGTTGCATGTTTTTCTAATATGTCAATGGAAATGTTGCTTTGAATTGTGATTTATTTGGTATCCATTCTATAAAGTTTTATGTAGAGGAAACAGTATCATGCTCAATCCTAGGTATAGGGTGTATCTGGGATGGGGTGTGACAGATAATCCATGAATATAGCTTGCATCCAAATTATTTGATGTGTGAAGGTGCAGATCCTAGTTATGTTTTATGTCCGATGAGGAAGAATGAAAGAGTTAAAAGAAAATTAGAAAAACGGTGCGAATTGCAACAACCTAGAAAGAAAAGAATAATTATATCTAAGATCTCTCATAATGAAAGACCGAAGACAAAAGCAAATGAAAGAAGTTTAGCTGAGTTGCAACTGATAGAGCACAGAGTAATGATACCTGAGATGATCTACAACACACTTGATATGACCACTAATCAAGATGTTAATGTAGTAGCTCATGTGCTTGATATGACCACCAATCAAGATGTTAATGTAGTAGGTCATGTGCCTAATATGACCACTGATCAAGATGTTAATGTAGTAACCCATGTGCCTAATATGACCACTAATCAAGACAACATCGATCAACTTGACATGCCTTTAATGCTCACAAATGAAAGCACTAGTTTTGGTACTAGTGATGTACCTTGCATGAGCATTGACAATGAATGGGCAGATTATTTAAATTCTATTTTAATATAAACGACTTTGACTTTCAACTTGATATTTAGAACAATTTTGACAAGACATCACTATGTTCAAAGTTTGATTGGACAAGATCAGTCATTGTATATATACGTGTTGTGGAATGAACTAATATTAATAAAGTATCATTTATTATTATTTTTTTTTTAGTGCAATGAAGTATTATTCTTTGCCACTCAAAGTATTGGCTTAGGCTATCTCTATATACATATATACAAAATTGCAACAAATCATACTAAAAATGGAGGAAATCAAGTGGGTAAGTTTTTATAACAATTTTCACACCATAAAAATGTGCTTTGGCACAACTTCAAATAGTACAACATTTCTATACTTTATTGTAGCATTGAAAGCATCGTATCTAAAACTCTATAATATTTATATTAAAGTATCGATGAGAGTAATGGTGATGTCAACTGAAATTTAAAAAAACTAAAAGATGTTTGAGAAATTTAGTTTAAACTATAGAGAGTAGCTCAATGTGAAGAGTTTCAATTGATCTTTAATAAACATATTATAGGTTTAGGTTTTGTTTGCATACGTCCTTATTACTGAAAAACTATCTTATTCTTATTTATTAATTATTATTAATAATATTATTTTGATAATACGTGGAGTGTAGGATCAAACTTCTAATGTAAGGTTGATAATACATATTTGATGTTAGTTGAACTATGAAAATTTTGACACTGAATATATATCTTAGATAGAAATAATATTTTCTTGGTTTTATTGTGTTTTTTTTTAAGTGAAACATAAATTATATAAGAGAATATCTTGGAATTGAATACCATGTCAATTAATTTAACAGATTAAAAGTTAAGCATGCCAAAAAACAATGGATGAAGCAAAGGAGTATAAGAAGGTGGCTAAAAATATCCAACTAGCAAAAAGGTTAATACATGATTATTATTAGTCAAATTTTAAAATTAAATTAGTTAATAAATAAAAACATTCTTAAAAAACAGATGACTCGAAAAATCCGACCAACCCAACCCAATCTGATTTGGATTGGGTTAAAATAAATGAAAATGTTATGGGTTGGATTAGTTCATGGGTTCACTTAAAATAACCCAAACCAATCCGAACTAACTCAAACTTATTATTAATTTTAAGATGTATATATATTTTTTACTTATGATAAAATTATAGAGACATATATTTATTTTAGTTTTATTTAATTTCATGCTTTTTCTTGGATAATTTCTTCTCTAACAACTCCTAAAAACAACTTTTTAGTACTTTGGAAAGAAATTTTTCATAATATAAATTGAACTAAGTTGTTAATTTTAATTCAATATATGAAAATAATTAGATAATTTTTTTACATGTTAACATTTTACTTCTATTAGAATAAAAATTTGAATAAATGATCCGATAACCCGAAACAACCCAACCCAAATGTTTCATGGTTGAGTTAATTTTTTAATAAGGGTTATTCAGGTTGAAAAAAATTTACAACCTGAACAATTGAGTTGAGTCTAAAAAGTACTTCAACTGAACCTAACCCAACCCACAAACACCCCTAAAATTTGAATTTGAAAGAATTACATATTATTTTGTTTACATTGGTAAAAAGATTAGGGGAAAAAATATTATACATAGAGTGAAAATAGTTATAACTCATTAATAAGAATGAAAATTTTGATTTACATGTAAATGTTTAATGTTTAAATTGTTACCATTGTTAGACTGAAAAGTTTTAATTGATAAGACCTTAAAATAAGAGATTATGAATTTTTTTTTTTATTTATAATTGGTAGCAATTTGAATATGTTATTTTGTAATTGTGTTACACTTATTTCATATTTTGCACATATGAAAAAAAAAACTTTACATTTGGACTTTAAATTATTTTTTAGTGAGGGCATTTACGACATTTTACATATCTTATATGAGAGGGTTAGAATTGGTTTTTGCCATTCATGCAAACAACAAATATTTGTGGTACATATGTAGTTTGTTTTGTACTTTTTGCAACTGCCTCATTTTTTTCTCAAGAATTTAATAAAATAAAGTATTATTTATAACTTTGAGTATTATCTATTTTTTAATTGTACTCTGATAGTTGACAATTTTGTTTTCAATTTTCTATTTTTGAAATTTATGTTTGTTTTTTCCTAAATTTAGTACTATCACTTTTTGATAGAAGCCTTTTAGTGTCTTTCTCAAAAAAACTCAATCAATGATATTTATATTCAAAATCTAACAATTCAACCAACAAATAGTATCAATAACAAGACCACGTCAAACCATGGGAAATCTAAGACAAAATATCTCTAAGTTAAATAAGTTTTTGGAAAGCAGTAAAAACAAGGGGTTTTAGTTTTGGTTGACAGAGAAACTAAATGCAGAAAAGAAAAATTGCAGGAAAGTAAGCGTAGATTGAAGCTTTGAAAATCGCAAAATCTCTCTCTCTCTAACTTAAAATTGAAGAGATACATTTATACAAATATTGCGGGCAGACGGTTCCACCCTCGAATCGAAGCGTTGCAGAGCTCCATGCCTGATGCACGCACACATCCTTCCATCAATATTTGAAGCACTGCGATGCTCCTTGAAATGGGTGCTTCTGCCCTTGGGTGTCGCGCGACTGCCAAGCAGGCACTACGATGCTAGCCGCCTAGGGACATTATTGTCCTTTTTCGTTCTTTTGAAGTCTAGTTGTGCTAACTAA

mRNA sequence

ATGGATTCTTCAATCGGTTGTTTAACATTGTCATTGAACCATTACGTGGGCGTCAAATTTACGTCTACCGATCAGCAACTTCTTCATTATCTTCATTATAAGACTTATGACCTCCCGTATTTTCAAGGTAGTGTTTTCGACTTTGATCTTTATGGTGGAACCGAGCCATGGAAAATCTGGCAACTTTTTGAAGTCATTGAGGGGGAAGATCTCTACTTCTTCACCAAACTCAAGAGATCTATAACAAACTCTGGACGTTTATTGGTGCACATTAACCGCAAGATTGGCTTGGCCAATGCCACTTGGAGTGAATTCACCAACTCCAATTTTTGCAATGATGCTGAAGAACAAATAATCGGATATAGCAAGCGCTTTAGACCGAAGACAAAAGCAAATGAAAGAAGTTTAGCTGAGTTGCAACTGATAGAGCACAGAGTAATGATACCTGAGATGATCTACAACACACTTGATATGACCACTAATCAAGATGTTAATGTAGTAGCTCATGTGCTTGATATGACCACCAATCAAGATGTTAATGTAGTAGGTCATGTGCCTAATATGACCACTGATCAAGATGTTAATGTAGTAACCCATGTGCCTAATATGACCACTAATCAAGACAACATCGATCAACTTGACATGCCTTTAATGCTCACAAATGAAAGCACTAGTTTTGGTACTAGTGATTCTAGTTGTGCTAACTAA

Coding sequence (CDS)

ATGGATTCTTCAATCGGTTGTTTAACATTGTCATTGAACCATTACGTGGGCGTCAAATTTACGTCTACCGATCAGCAACTTCTTCATTATCTTCATTATAAGACTTATGACCTCCCGTATTTTCAAGGTAGTGTTTTCGACTTTGATCTTTATGGTGGAACCGAGCCATGGAAAATCTGGCAACTTTTTGAAGTCATTGAGGGGGAAGATCTCTACTTCTTCACCAAACTCAAGAGATCTATAACAAACTCTGGACGTTTATTGGTGCACATTAACCGCAAGATTGGCTTGGCCAATGCCACTTGGAGTGAATTCACCAACTCCAATTTTTGCAATGATGCTGAAGAACAAATAATCGGATATAGCAAGCGCTTTAGACCGAAGACAAAAGCAAATGAAAGAAGTTTAGCTGAGTTGCAACTGATAGAGCACAGAGTAATGATACCTGAGATGATCTACAACACACTTGATATGACCACTAATCAAGATGTTAATGTAGTAGCTCATGTGCTTGATATGACCACCAATCAAGATGTTAATGTAGTAGGTCATGTGCCTAATATGACCACTGATCAAGATGTTAATGTAGTAACCCATGTGCCTAATATGACCACTAATCAAGACAACATCGATCAACTTGACATGCCTTTAATGCTCACAAATGAAAGCACTAGTTTTGGTACTAGTGATTCTAGTTGTGCTAACTAA

Protein sequence

MDSSIGCLTLSLNHYVGVKFTSTDQQLLHYLHYKTYDLPYFQGSVFDFDLYGGTEPWKIWQLFEVIEGEDLYFFTKLKRSITNSGRLLVHINRKIGLANATWSEFTNSNFCNDAEEQIIGYSKRFRPKTKANERSLAELQLIEHRVMIPEMIYNTLDMTTNQDVNVVAHVLDMTTNQDVNVVGHVPNMTTDQDVNVVTHVPNMTTNQDNIDQLDMPLMLTNESTSFGTSDSSCAN

Homology

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BLAST of Clc04G01590 vs. NCBI nr
Match: XP_004142192.1 (NAC domain-containing protein 83 [Cucumis sativus] >KGN54288.1 hypothetical protein Csa_017977 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 1.7e-45
Identity = 125/284 (44.01%), Postives = 152/284 (53.52%), Query Frame = 0


Query: 1   MDSSIGCLTLSLNHYVGVKFTSTDQQLLHYLHYKTYDLPYFQGSVFDFDLYGGTEPWKIW 60
           MDSS G L L LNHYVGVKF  TDQQLLHYLH K Y  PYFQG+VFDFDLYGG EPW+IW
Sbjct: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  QLFEVIEGEDLYFFTKLKRSITNSGRLLVHINRKIGLANATWSEFTNSN--FCNDAEEQI 120
           Q F  I+GEDLYFFTKLKRS TNSG L  HINRKIGL N TWS   +++  + N   EQI
Sbjct: 61  QSFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQI 120

Query: 121 IGYSKRFRPKTKA------------------------------------NERSLAEL--- 180
           IGY KRFR + ++                                    N+R+  +L   
Sbjct: 121 IGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQRAKRKLETE 180

Query: 181 ----QLIEHRVMIPEMIYNTLDMTTN---------QDVNVVAHVLDMTTNQDVNVVGHVP 231
               Q  + R+ + E+  N                Q ++  A + +   N D+       
Sbjct: 181 SELKQSNKKRMKVREISNNERPKAKTKTKKRCDELQPIDQRAIICETIYNSDIR-----H 240

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BLAST of Clc04G01590 vs. NCBI nr
Match: XP_011652873.2 (NAC transcription factor 56 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-44
Identity = 122/282 (43.26%), Postives = 155/282 (54.96%), Query Frame = 0


Query: 1   MDSSIGCLTLSLNHYVGVKFTSTDQQLLHYLHYKTYDLPYFQGSVFDFDLYGGTEPWKIW 60
           MDSS G L L LNHYVGVKF  TDQQLLHYLH K Y  PYFQG+VFDFDLYGG EPW+IW
Sbjct: 1   MDSSSGSLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  QLFEVIEGEDLYFFTKLKRSITNSGRLLVHINRKIGLANATWSEFTNSN--FCNDAEEQI 120
           + F  I+GEDLYFFTKLKRS TNSG L  HINRKIGL N TWS   +++  + N+ ++QI
Sbjct: 61  ESFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNEDDQQI 120

Query: 121 IGYSKRFRPKTKA-----------------------------------NERSLAELQL-- 180
           IGY KRFR + ++                                   NER+  +L++  
Sbjct: 121 IGYRKRFRYENESSEEHHGEWIMHEYNLHPNYLCEGVDPNYVLCRIRRNERARRKLEIQG 180

Query: 181 -----IEHRVMIPEMIYNTLDMT-TNQDVNVVAHVLDMTT-------NQDVNVVGHVPNM 231
                 + R+  P++  N      T +  + +  + D          N D+       +M
Sbjct: 181 ELKQPNKKRIKAPKISRNERPKAKTRERCDELQPIDDQRAITCETIYNSDIR-----HDM 240

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BLAST of Clc04G01590 vs. NCBI nr
Match: XP_008465646.1 (PREDICTED: NAC domain-containing protein 83-like [Cucumis melo] >KAA0041044.1 NAC domain-containing protein 83-like [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 7.3e-44
Identity = 121/277 (43.68%), Postives = 156/277 (56.32%), Query Frame = 0


Query: 1   MDSSIGCLTLSLNHYVGVKFTSTDQQLLHYLHYKTYDLPYFQGSVFDFDLYGGTEPWKIW 60
           MDSS G L L LN YVGVKF  TDQQLLHYL+ K    PYFQG++FDFDLYGGTEPW+IW
Sbjct: 1   MDSSSGYLPLPLNQYVGVKFRPTDQQLLHYLYCKINGQPYFQGAIFDFDLYGGTEPWEIW 60

Query: 61  QLFEVIEGEDLYFFTKLKRSITNSGRLLVHINRKIGLANATWSEFTNSN--FCNDAEEQI 120
           Q F+ I+GEDLYFFTKLKRS  N G+L  HI+RKIGLAN TWS   ++   F N+ +EQI
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIFANEDDEQI 120

Query: 121 IGYSKRFR------------------------------------PKTKANERSLAELQLI 180
           IGY KRFR                                     + + NER+  +L++ 
Sbjct: 121 IGYRKRFRYENDQVEEHHGEWIMHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEIR 180

Query: 181 E------HRVMIPEMIYNTLDMTTNQDVNVVAHVLD----MTTNQDVNVVGHVPNMTTDQ 229
           E       R+  P++  N    T  ++  +V  +      +   + +     +P+ TT +
Sbjct: 181 ELQQPNKKRMTAPKISPNKRLKTKAKESCLVDQLQPIEPRLMIRETIYNSNIIPDKTTCE 240

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BLAST of Clc04G01590 vs. NCBI nr
Match: TYK12052.1 (NAC domain-containing protein 83-like [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 7.3e-44
Identity = 121/277 (43.68%), Postives = 156/277 (56.32%), Query Frame = 0


Query: 1   MDSSIGCLTLSLNHYVGVKFTSTDQQLLHYLHYKTYDLPYFQGSVFDFDLYGGTEPWKIW 60
           MDSS G L L LN YVGVKF  TDQQLLHYL+ K    PYFQG++FDFDLYGGTEPW+IW
Sbjct: 1   MDSSSGYLPLPLNQYVGVKFRPTDQQLLHYLYCKINGQPYFQGAIFDFDLYGGTEPWEIW 60

Query: 61  QLFEVIEGEDLYFFTKLKRSITNSGRLLVHINRKIGLANATWSEFTNSN--FCNDAEEQI 120
           Q F+ I+GEDLYFFTKLKRS  N G+L  HI+RKIGLAN TWS   ++   F N+ +EQI
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIFANEDDEQI 120

Query: 121 IGYSKRFR------------------------------------PKTKANERSLAELQLI 180
           IGY KRFR                                     + + NER+  +L++ 
Sbjct: 121 IGYRKRFRYENDQVEEHHGEWIMHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEIR 180

Query: 181 E------HRVMIPEMIYNTLDMTTNQDVNVVAHVLD----MTTNQDVNVVGHVPNMTTDQ 229
           E       R+  P++  N    T  ++  +V  +      +   + +     +P+ TT +
Sbjct: 181 ELQQPNKKRMTAPKISPNKRLKTKAKESCLVDQLQPIEPRLMIRETIYNSNIIPDKTTCE 240

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BLAST of Clc04G01590 vs. NCBI nr
Match: XP_004139160.1 (NAC domain-containing protein 105 [Cucumis sativus] >KAE8653567.1 hypothetical protein Csa_006844 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 1.2e-43
Identity = 120/269 (44.61%), Postives = 147/269 (54.65%), Query Frame = 0


Query: 2   DSSIGCLTLSLNHYVGVKFTSTDQQLLHYLHYKTYDLPYFQGSVFDFDLYGGTEPWKIWQ 61
           +SS G L L LNHYVG+KF  TDQQLLHYLH K Y  PYFQG+VFDFDLYGG EPW+IWQ
Sbjct: 6   NSSCGYLPLPLNHYVGLKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQ 65

Query: 62  LFEVIEGEDLYFFTKLKRSITNSGRLLVHINRKIGLANATWSEFTNSN--FCNDAEEQII 121
            F  I+GEDLYFFTKLKRS TN G L  H+NRKIGL N TWS   +++  + N+  E+II
Sbjct: 66  SFGGIDGEDLYFFTKLKRSTTNCGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEII 125

Query: 122 GYSKRFRPKTKANERSLAELQLIEH-------RVMIPEMIYNTLDMTTNQDVN------- 181
           GY KRFR + ++ E    E  + E+       R    +  Y    M  N+ V        
Sbjct: 126 GYRKRFRYENESLEEHHGEWIMHEYSMHQRYLRCEGVDSNYVLCRMRKNERVKRKLLEIQ 185

Query: 182 -----------VVAHVLD-------------MTTNQDVNVVGHVPNMTTDQDVNVVTHVP 231
                         H+ D              TT + +  +   P+M T QD++VV  VP
Sbjct: 186 GEAKQPNKKRIKAPHISDNERCDELQPIDQRATTCETIYNLDIRPDMNTHQDISVVDRVP 245

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BLAST of Clc04G01590 vs. ExPASy TrEMBL
Match: A0A0A0KXM1 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 8.4e-46
Identity = 125/284 (44.01%), Postives = 152/284 (53.52%), Query Frame = 0


Query: 1   MDSSIGCLTLSLNHYVGVKFTSTDQQLLHYLHYKTYDLPYFQGSVFDFDLYGGTEPWKIW 60
           MDSS G L L LNHYVGVKF  TDQQLLHYLH K Y  PYFQG+VFDFDLYGG EPW+IW
Sbjct: 1   MDSSSGYLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  QLFEVIEGEDLYFFTKLKRSITNSGRLLVHINRKIGLANATWSEFTNSN--FCNDAEEQI 120
           Q F  I+GEDLYFFTKLKRS TNSG L  HINRKIGL N TWS   +++  + N   EQI
Sbjct: 61  QSFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQI 120

Query: 121 IGYSKRFRPKTKA------------------------------------NERSLAEL--- 180
           IGY KRFR + ++                                    N+R+  +L   
Sbjct: 121 IGYRKRFRYENESLEEHHGEWIMHEYSLHPDYLRCEGVDPNYVLCRIRKNQRAKRKLETE 180

Query: 181 ----QLIEHRVMIPEMIYNTLDMTTN---------QDVNVVAHVLDMTTNQDVNVVGHVP 231
               Q  + R+ + E+  N                Q ++  A + +   N D+       
Sbjct: 181 SELKQSNKKRMKVREISNNERPKAKTKTKKRCDELQPIDQRAIICETIYNSDIR-----H 240

[Close]

BLAST of Clc04G01590 vs. ExPASy TrEMBL
Match: A0A0A0LFJ5 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G838730 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.5e-45
Identity = 123/282 (43.62%), Postives = 155/282 (54.96%), Query Frame = 0


Query: 1   MDSSIGCLTLSLNHYVGVKFTSTDQQLLHYLHYKTYDLPYFQGSVFDFDLYGGTEPWKIW 60
           MDSS G L L LNHYVGVKF  TDQQLLHYLH K Y  PYFQG+VFDFDLYGG EPW+IW
Sbjct: 1   MDSSSGSLPLPLNHYVGVKFRPTDQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIW 60

Query: 61  QLFEVIEGEDLYFFTKLKRSITNSGRLLVHINRKIGLANATWSEFTNSN--FCNDAEEQI 120
           Q F  I+GEDLYFFTKLKRS TNSG L  HINRKIGL N TWS   +++  + N+ ++QI
Sbjct: 61  QSFGGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSASPIYVNEDDQQI 120

Query: 121 IGYSKRFRPKTKA-----------------------------------NERSLAELQL-- 180
           IGY KRFR + ++                                   NER+  +L++  
Sbjct: 121 IGYRKRFRYENESSEEHHGEWIMHEYNLHPNYLCEGVDPNYVLCRIRRNERARRKLEIQG 180

Query: 181 -----IEHRVMIPEMIYNTLDMT-TNQDVNVVAHVLDMTT-------NQDVNVVGHVPNM 231
                 + R+  P++  N      T +  + +  + D          N D+       +M
Sbjct: 181 ELKQPNKKRIKAPKISRNERPKAKTRERCDELQPIDDQRAITCETIYNSDIR-----HDM 240

[Close]

BLAST of Clc04G01590 vs. ExPASy TrEMBL
Match: A0A5A7TC54 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold477G00130 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.5e-44
Identity = 121/277 (43.68%), Postives = 156/277 (56.32%), Query Frame = 0


Query: 1   MDSSIGCLTLSLNHYVGVKFTSTDQQLLHYLHYKTYDLPYFQGSVFDFDLYGGTEPWKIW 60
           MDSS G L L LN YVGVKF  TDQQLLHYL+ K    PYFQG++FDFDLYGGTEPW+IW
Sbjct: 1   MDSSSGYLPLPLNQYVGVKFRPTDQQLLHYLYCKINGQPYFQGAIFDFDLYGGTEPWEIW 60

Query: 61  QLFEVIEGEDLYFFTKLKRSITNSGRLLVHINRKIGLANATWSEFTNSN--FCNDAEEQI 120
           Q F+ I+GEDLYFFTKLKRS  N G+L  HI+RKIGLAN TWS   ++   F N+ +EQI
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIFANEDDEQI 120

Query: 121 IGYSKRFR------------------------------------PKTKANERSLAELQLI 180
           IGY KRFR                                     + + NER+  +L++ 
Sbjct: 121 IGYRKRFRYENDQVEEHHGEWIMHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEIR 180

Query: 181 E------HRVMIPEMIYNTLDMTTNQDVNVVAHVLD----MTTNQDVNVVGHVPNMTTDQ 229
           E       R+  P++  N    T  ++  +V  +      +   + +     +P+ TT +
Sbjct: 181 ELQQPNKKRMTAPKISPNKRLKTKAKESCLVDQLQPIEPRLMIRETIYNSNIIPDKTTCE 240

[Close]

BLAST of Clc04G01590 vs. ExPASy TrEMBL
Match: A0A5D3CL63 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00650 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.5e-44
Identity = 121/277 (43.68%), Postives = 156/277 (56.32%), Query Frame = 0


Query: 1   MDSSIGCLTLSLNHYVGVKFTSTDQQLLHYLHYKTYDLPYFQGSVFDFDLYGGTEPWKIW 60
           MDSS G L L LN YVGVKF  TDQQLLHYL+ K    PYFQG++FDFDLYGGTEPW+IW
Sbjct: 1   MDSSSGYLPLPLNQYVGVKFRPTDQQLLHYLYCKINGQPYFQGAIFDFDLYGGTEPWEIW 60

Query: 61  QLFEVIEGEDLYFFTKLKRSITNSGRLLVHINRKIGLANATWSEFTNSN--FCNDAEEQI 120
           Q F+ I+GEDLYFFTKLKRS  N G+L  HI+RKIGLAN TWS   ++   F N+ +EQI
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIFANEDDEQI 120

Query: 121 IGYSKRFR------------------------------------PKTKANERSLAELQLI 180
           IGY KRFR                                     + + NER+  +L++ 
Sbjct: 121 IGYRKRFRYENDQVEEHHGEWIMHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEIR 180

Query: 181 E------HRVMIPEMIYNTLDMTTNQDVNVVAHVLD----MTTNQDVNVVGHVPNMTTDQ 229
           E       R+  P++  N    T  ++  +V  +      +   + +     +P+ TT +
Sbjct: 181 ELQQPNKKRMTAPKISPNKRLKTKAKESCLVDQLQPIEPRLMIRETIYNSNIIPDKTTCE 240

[Close]

BLAST of Clc04G01590 vs. ExPASy TrEMBL
Match: A0A1S3CPA2 (NAC domain-containing protein 83-like OS=Cucumis melo OX=3656 GN=LOC103503286 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 3.5e-44
Identity = 121/277 (43.68%), Postives = 156/277 (56.32%), Query Frame = 0


Query: 1   MDSSIGCLTLSLNHYVGVKFTSTDQQLLHYLHYKTYDLPYFQGSVFDFDLYGGTEPWKIW 60
           MDSS G L L LN YVGVKF  TDQQLLHYL+ K    PYFQG++FDFDLYGGTEPW+IW
Sbjct: 1   MDSSSGYLPLPLNQYVGVKFRPTDQQLLHYLYCKINGQPYFQGAIFDFDLYGGTEPWEIW 60

Query: 61  QLFEVIEGEDLYFFTKLKRSITNSGRLLVHINRKIGLANATWSEFTNSN--FCNDAEEQI 120
           Q F+ I+GEDLYFFTKLKRS  N G+L  HI+RKIGLAN TWS   ++   F N+ +EQI
Sbjct: 61  QSFKGIDGEDLYFFTKLKRSTKNCGQLSAHISRKIGLANGTWSGENSATPIFANEDDEQI 120

Query: 121 IGYSKRFR------------------------------------PKTKANERSLAELQLI 180
           IGY KRFR                                     + + NER+  +L++ 
Sbjct: 121 IGYRKRFRYENDQVEEHHGEWIMHEYRLHQSYLAYQDVDHNYVLCRIRKNERAKRKLEIR 180

Query: 181 E------HRVMIPEMIYNTLDMTTNQDVNVVAHVLD----MTTNQDVNVVGHVPNMTTDQ 229
           E       R+  P++  N    T  ++  +V  +      +   + +     +P+ TT +
Sbjct: 181 ELQQPNKKRMTAPKISPNKRLKTKAKESCLVDQLQPIEPRLMIRETIYNSNIIPDKTTCE 240

The following BLAST results are available for this feature:

BLAST of Clc04G01590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142192.1	1.7e-45	44.01	NAC domain-containing protein 83 [Cucumis sativus] >KGN54288.1 hypothetical prot...	[more]
XP_011652873.2	1.1e-44	43.26	NAC transcription factor 56 [Cucumis sativus]	[more]
XP_008465646.1	7.3e-44	43.68	PREDICTED: NAC domain-containing protein 83-like [Cucumis melo] >KAA0041044.1 NA...	[more]
TYK12052.1	7.3e-44	43.68	NAC domain-containing protein 83-like [Cucumis melo var. makuwa]	[more]
XP_004139160.1	1.2e-43	44.61	NAC domain-containing protein 105 [Cucumis sativus] >KAE8653567.1 hypothetical p...	[more]

BLAST of Clc04G01590 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc04G01590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXM1	8.4e-46	44.01	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV...	[more]
A0A0A0LFJ5	2.5e-45	43.62	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G838730 PE=4 SV...	[more]
A0A5A7TC54	3.5e-44	43.68	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A5D3CL63	3.5e-44	43.68	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CPA2	3.5e-44	43.68	NAC domain-containing protein 83-like OS=Cucumis melo OX=3656 GN=LOC103503286 PE...	[more]

BLAST of Clc04G01590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 23..175 e-value: 2.1E-8 score: 36.2
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 10..125
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 16..126 e-value: 1.6E-5 score: 25.8
None	No IPR available	PANTHER	PTHR31989:SF220	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 15..126
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 15..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G01590.2	Clc04G01590.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding