Clc04G00350 (gene) Watermelon (cordophanus) v2

Overview
NameClc04G00350
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionBeta-galactosidase
LocationClcChr04: 1158074 .. 1158406 (+)
RNA-Seq ExpressionClc04G00350
SyntenyClc04G00350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTAAACTTCAATGGCTTGTTCTTCCCCTCGTTGCAGCTTTAGCTTCCTTTTCCTTTTGTACAGGAGACAATGTCTCCTACGATTCAAATGCCATAATTATCAATGGTGAACGACGCGTTATCTTCTCAGGTTCAATTCATTATCCACGCAGCACCGATGCAATGTGGCCTGATCTTATTCAAAAAGCTAAAGATGGTGGACTGGATGCAATCGAGACATATATTTTTTGGGATCGCCACGAACCTCAACGACGAAAATACGATTTCTCTGGACATCTAAATTTTATCAAATTCTTCCAGCTCGTTCAAGATGCCGGCTATATGTCGTGA

mRNA sequence

ATGTTTAAACTTCAATGGCTTGTTCTTCCCCTCGTTGCAGCTTTAGCTTCCTTTTCCTTTTGTACAGGAGACAATGTCTCCTACGATTCAAATGCCATAATTATCAATGGTGAACGACGCGTTATCTTCTCAGGTTCAATTCATTATCCACGCAGCACCGATGCAATGTGGCCTGATCTTATTCAAAAAGCTAAAGATGGTGGACTGGATGCAATCGAGACATATATTTTTTGGGATCGCCACGAACCTCAACGACGAAAATACGATTTCTCTGGACATCTAAATTTTATCAAATTCTTCCAGCTCGTTCAAGATGCCGGCTATATGTCGTGA

Coding sequence (CDS)

ATGTTTAAACTTCAATGGCTTGTTCTTCCCCTCGTTGCAGCTTTAGCTTCCTTTTCCTTTTGTACAGGAGACAATGTCTCCTACGATTCAAATGCCATAATTATCAATGGTGAACGACGCGTTATCTTCTCAGGTTCAATTCATTATCCACGCAGCACCGATGCAATGTGGCCTGATCTTATTCAAAAAGCTAAAGATGGTGGACTGGATGCAATCGAGACATATATTTTTTGGGATCGCCACGAACCTCAACGACGAAAATACGATTTCTCTGGACATCTAAATTTTATCAAATTCTTCCAGCTCGTTCAAGATGCCGGCTATATGTCGTGA

Protein sequence

MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAGYMS
Homology
[Close]
BLAST of Clc04G00350 vs. NCBI nr
Match: KAA0060182.1 (beta-galactosidase-like [Cucumis melo var. makuwa])

HSP 1 Score: 208.0 bits (528), Expect = 4.2e-50
Identity = 96/107 (89.72%), Postives = 100/107 (93.46%), Query Frame = 0 

Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60
           MF  QW VL +VA LA FSFC GDN+SYDSNAIIINGERR+IFSGSIHYPRSTDAMWPDL
Sbjct: 1   MFNFQWHVLIVVATLACFSFCIGDNISYDSNAIIINGERRLIFSGSIHYPRSTDAMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           IQKAKDGGLDAIETYIFWDRHEP+RRKYDFSGHLNFIKFFQLVQDAG
Sbjct: 61  IQKAKDGGLDAIETYIFWDRHEPRRRKYDFSGHLNFIKFFQLVQDAG 107

[Close]
BLAST of Clc04G00350 vs. NCBI nr
Match: XP_008444022.1 (PREDICTED: beta-galactosidase-like [Cucumis melo])

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 0 

Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60
           MF  QW VL +VA LA FSFC GDN+SYDSNAIIINGERR+IFSGSIHYPRSTD MWPDL
Sbjct: 1   MFNFQWHVLIVVATLACFSFCIGDNISYDSNAIIINGERRLIFSGSIHYPRSTDTMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           IQKAKDGGLDAIETYIFWDRHEP+RRKYDFSGHLNFIKFFQLVQDAG
Sbjct: 61  IQKAKDGGLDAIETYIFWDRHEPRRRKYDFSGHLNFIKFFQLVQDAG 107

[Close]
BLAST of Clc04G00350 vs. NCBI nr
Match: TYK04229.1 (beta-galactosidase-like [Cucumis melo var. makuwa])

HSP 1 Score: 206.5 bits (524), Expect = 1.2e-49
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 0 

Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60
           MF  QW VL +VA LA FSFC GDN+SYDSNAIIINGERR+IFSGSIHYPRSTD MWPDL
Sbjct: 1   MFNFQWHVLIVVATLACFSFCIGDNISYDSNAIIINGERRLIFSGSIHYPRSTDTMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           IQKAKDGGLDAIETYIFWDRHEP+RRKYDFSGHLNFIKFFQLVQDAG
Sbjct: 61  IQKAKDGGLDAIETYIFWDRHEPRRRKYDFSGHLNFIKFFQLVQDAG 107

[Close]
BLAST of Clc04G00350 vs. NCBI nr
Match: KAE8653552.1 (hypothetical protein Csa_007631 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 2.7e-49
Identity = 96/107 (89.72%), Postives = 98/107 (91.59%), Query Frame = 0 

Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60
           MF   W VL  +A LA FSFC GDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL
Sbjct: 1   MFNFLWHVLLFIATLAWFSFCMGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           IQKAKDGGLDAIETYIFWDRHEPQR+KYDFSGHLNFIKFFQLVQDAG
Sbjct: 61  IQKAKDGGLDAIETYIFWDRHEPQRQKYDFSGHLNFIKFFQLVQDAG 107

[Close]
BLAST of Clc04G00350 vs. NCBI nr
Match: XP_038896535.1 (beta-galactosidase 15-like [Benincasa hispida])

HSP 1 Score: 200.7 bits (509), Expect = 6.7e-48
Identity = 93/107 (86.92%), Postives = 98/107 (91.59%), Query Frame = 0 

Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60
           M   QWLVLPLV  L+ FSFC G +VSYDSNAIIINGERRVIFSGSIHYPRST+AMWP+L
Sbjct: 1   MVNFQWLVLPLVVTLSCFSFCKGGSVSYDSNAIIINGERRVIFSGSIHYPRSTEAMWPNL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           IQKAKDG LDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQ+AG
Sbjct: 61  IQKAKDGELDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQEAG 107

[Close]
BLAST of Clc04G00350 vs. ExPASy Swiss-Prot
Match: Q9SCV5 (Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2)

HSP 1 Score: 138.3 bits (347), Expect = 5.3e-32
Identity = 60/96 (62.50%), Postives = 75/96 (78.12%), Query Frame = 0 

Query: 15  LASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDLIQKAKDGGLDAIET 74
           + S S      VS+D  AI ING+RR++ SGSIHYPRST  MWPDLI KAKDGGLDAIET
Sbjct: 17  ITSLSLAKSTIVSHDERAITINGKRRILLSGSIHYPRSTADMWPDLINKAKDGGLDAIET 76

Query: 75  YIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAGYMS 111
           Y+FW+ HEP+RR+YDFSG+L+ ++F + +QDAG  S
Sbjct: 77  YVFWNAHEPKRREYDFSGNLDVVRFIKTIQDAGLYS 112

[Close]
BLAST of Clc04G00350 vs. ExPASy Swiss-Prot
Match: Q8RUV9 (Beta-galactosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0533400 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.5e-31
Identity = 59/102 (57.84%), Postives = 81/102 (79.41%), Query Frame = 0 

Query: 6   WLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDLIQKAK 65
           W+ L ++A  A    CT  +VSYD  +++I+G+RR+I SGSIHYPRST  MWPDLI+KAK
Sbjct: 13  WVALLVLAVAADAVGCT--SVSYDDRSLVIDGQRRIILSGSIHYPRSTPEMWPDLIKKAK 72

Query: 66  DGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           +GGLDAIETYIFW+ HEP RR+Y+F G+ + ++FF+ +Q+AG
Sbjct: 73  EGGLDAIETYIFWNGHEPHRRQYNFEGNYDVVRFFKEIQNAG 112

[Close]
BLAST of Clc04G00350 vs. ExPASy Swiss-Prot
Match: P49676 (Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.0e-30
Identity = 57/96 (59.38%), Postives = 72/96 (75.00%), Query Frame = 0 

Query: 15  LASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDLIQKAKDGGLDAIET 74
           + SF       VS+D  AI I+G+RR++ SGSIHYPRST  MWPDLI KAKDGGLD IET
Sbjct: 16  ITSFGSANSTIVSHDERAITIDGQRRILLSGSIHYPRSTSDMWPDLISKAKDGGLDTIET 75

Query: 75  YIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAGYMS 111
           Y+FW+ HEP RR+YDFSG+L+ ++F + +Q AG  S
Sbjct: 76  YVFWNAHEPSRRQYDFSGNLDLVRFIKTIQSAGLYS 111

[Close]
BLAST of Clc04G00350 vs. ExPASy Swiss-Prot
Match: Q67VU7 (Putative beta-galactosidase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0628500 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-30
Identity = 58/101 (57.43%), Postives = 79/101 (78.22%), Query Frame = 0 

Query: 7   LVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDLIQKAKD 66
           LV  LV  LA  +   G  V+Y+  +++I+GERR+I SGSIHYPRST  MWPDLI+KAK+
Sbjct: 12  LVALLVVVLAEAAGVGGTTVTYNDRSLVIDGERRIIISGSIHYPRSTPEMWPDLIKKAKE 71

Query: 67  GGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           GGLDAIETY+FW+ HEP RR+Y+F G+ + ++FF+ +Q+AG
Sbjct: 72  GGLDAIETYVFWNGHEPHRRQYNFVGNYDIVRFFKEIQNAG 112

[Close]
BLAST of Clc04G00350 vs. ExPASy Swiss-Prot
Match: Q7G3T8 (Beta-galactosidase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0330600 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 6.5e-30
Identity = 58/101 (57.43%), Postives = 78/101 (77.23%), Query Frame = 0 

Query: 7   LVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDLIQKAKD 66
           LV  LV  LA  +      V+Y+  +++I+GERR+I SGSIHYPRST  MWPDLI+KAK+
Sbjct: 12  LVALLVVVLAEAAGVGCTTVAYNDRSLVIDGERRIIISGSIHYPRSTPEMWPDLIKKAKE 71

Query: 67  GGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           GGLDAIETY+FW+ HEP RR+Y+F G+ + I+FF+ +Q+AG
Sbjct: 72  GGLDAIETYVFWNGHEPHRRQYNFEGNYDIIRFFKEIQNAG 112

[Close]
BLAST of Clc04G00350 vs. ExPASy TrEMBL
Match: A0A5A7UWH0 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold542G00600 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-50
Identity = 96/107 (89.72%), Postives = 100/107 (93.46%), Query Frame = 0 

Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60
           MF  QW VL +VA LA FSFC GDN+SYDSNAIIINGERR+IFSGSIHYPRSTDAMWPDL
Sbjct: 1   MFNFQWHVLIVVATLACFSFCIGDNISYDSNAIIINGERRLIFSGSIHYPRSTDAMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           IQKAKDGGLDAIETYIFWDRHEP+RRKYDFSGHLNFIKFFQLVQDAG
Sbjct: 61  IQKAKDGGLDAIETYIFWDRHEPRRRKYDFSGHLNFIKFFQLVQDAG 107

[Close]
BLAST of Clc04G00350 vs. ExPASy TrEMBL
Match: A0A5D3C1I9 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold758G00020 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.9e-50
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 0 

Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60
           MF  QW VL +VA LA FSFC GDN+SYDSNAIIINGERR+IFSGSIHYPRSTD MWPDL
Sbjct: 1   MFNFQWHVLIVVATLACFSFCIGDNISYDSNAIIINGERRLIFSGSIHYPRSTDTMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           IQKAKDGGLDAIETYIFWDRHEP+RRKYDFSGHLNFIKFFQLVQDAG
Sbjct: 61  IQKAKDGGLDAIETYIFWDRHEPRRRKYDFSGHLNFIKFFQLVQDAG 107

[Close]
BLAST of Clc04G00350 vs. ExPASy TrEMBL
Match: A0A1S3BA81 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103487469 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.9e-50
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 0 

Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60
           MF  QW VL +VA LA FSFC GDN+SYDSNAIIINGERR+IFSGSIHYPRSTD MWPDL
Sbjct: 1   MFNFQWHVLIVVATLACFSFCIGDNISYDSNAIIINGERRLIFSGSIHYPRSTDTMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           IQKAKDGGLDAIETYIFWDRHEP+RRKYDFSGHLNFIKFFQLVQDAG
Sbjct: 61  IQKAKDGGLDAIETYIFWDRHEPRRRKYDFSGHLNFIKFFQLVQDAG 107

[Close]
BLAST of Clc04G00350 vs. ExPASy TrEMBL
Match: A0A5D3DUP4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G00870 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 93/107 (86.92%), Postives = 98/107 (91.59%), Query Frame = 0 

Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60
           MFKLQW    LVA LA  +FC GDNVSYDSNAIIINGERR+IFSGSIHYPRST+AMWPDL
Sbjct: 1   MFKLQW----LVATLACLTFCIGDNVSYDSNAIIINGERRIIFSGSIHYPRSTEAMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSG L+FIKFFQL+QDAG
Sbjct: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGRLDFIKFFQLIQDAG 103

[Close]
BLAST of Clc04G00350 vs. ExPASy TrEMBL
Match: A0A5A7V9Y9 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00750 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47
Identity = 93/107 (86.92%), Postives = 98/107 (91.59%), Query Frame = 0 

Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60
           MFKLQW    LVA LA  +FC GDNVSYDSNAIIINGERR+IFSGSIHYPRST+AMWPDL
Sbjct: 1   MFKLQW----LVATLACLTFCIGDNVSYDSNAIIINGERRIIFSGSIHYPRSTEAMWPDL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSG L+FIKFFQL+QDAG
Sbjct: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGRLDFIKFFQLIQDAG 103

[Close]
BLAST of Clc04G00350 vs. TAIR 10
Match: AT5G20710.1 (beta-galactosidase 7 )

HSP 1 Score: 138.3 bits (347), Expect = 3.8e-33
Identity = 60/96 (62.50%), Postives = 75/96 (78.12%), Query Frame = 0 

Query: 15  LASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDLIQKAKDGGLDAIET 74
           + S S      VS+D  AI ING+RR++ SGSIHYPRST  MWPDLI KAKDGGLDAIET
Sbjct: 17  ITSLSLAKSTIVSHDERAITINGKRRILLSGSIHYPRSTADMWPDLINKAKDGGLDAIET 76

Query: 75  YIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAGYMS 111
           Y+FW+ HEP+RR+YDFSG+L+ ++F + +QDAG  S
Sbjct: 77  YVFWNAHEPKRREYDFSGNLDVVRFIKTIQDAGLYS 112

[Close]
BLAST of Clc04G00350 vs. TAIR 10
Match: AT2G28470.1 (beta-galactosidase 8 )

HSP 1 Score: 127.1 bits (318), Expect = 8.7e-30
Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 0 

Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60
           M K++ + + L+  L      T  NV+YD  A++I+G+R+V+ SGSIHYPRST  MWP+L
Sbjct: 7   MVKVRKMEMILLLILVIVVAATAANVTYDHRALVIDGKRKVLISGSIHYPRSTPEMWPEL 66

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           IQK+KDGGLD IETY+FW  HEP++ KY+F G  + +KF +L   AG
Sbjct: 67  IQKSKDGGLDVIETYVFWSGHEPEKNKYNFEGRYDLVKFVKLAAKAG 113

[Close]
BLAST of Clc04G00350 vs. TAIR 10
Match: AT2G28470.2 (beta-galactosidase 8 )

HSP 1 Score: 127.1 bits (318), Expect = 8.7e-30
Identity = 55/107 (51.40%), Postives = 76/107 (71.03%), Query Frame = 0 

Query: 1   MFKLQWLVLPLVAALASFSFCTGDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDL 60
           M K++ + + L+  L      T  NV+YD  A++I+G+R+V+ SGSIHYPRST  MWP+L
Sbjct: 1   MVKVRKMEMILLLILVIVVAATAANVTYDHRALVIDGKRKVLISGSIHYPRSTPEMWPEL 60

Query: 61  IQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           IQK+KDGGLD IETY+FW  HEP++ KY+F G  + +KF +L   AG
Sbjct: 61  IQKSKDGGLDVIETYVFWSGHEPEKNKYNFEGRYDLVKFVKLAAKAG 107

[Close]
BLAST of Clc04G00350 vs. TAIR 10
Match: AT3G13750.1 (beta galactosidase 1 )

HSP 1 Score: 126.3 bits (316), Expect = 1.5e-29
Identity = 56/94 (59.57%), Postives = 71/94 (75.53%), Query Frame = 0 

Query: 15  LASFSFCT-GDNVSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDLIQKAKDGGLDAIE 74
           L  F  C+   +VSYDS AI ING+RR++ SGSIHYPRST  MWPDLI+KAK+GGLD I+
Sbjct: 22  LLGFLVCSVSGSVSYDSRAITINGKRRILISGSIHYPRSTPEMWPDLIRKAKEGGLDVIQ 81

Query: 75  TYIFWDRHEPQRRKYDFSGHLNFIKFFQLVQDAG 108
           TY+FW+ HEP   KY F G+ + +KF +LVQ +G
Sbjct: 82  TYVFWNGHEPSPGKYYFEGNYDLVKFVKLVQQSG 115

[Close]
BLAST of Clc04G00350 vs. TAIR 10
Match: AT1G31740.1 (beta-galactosidase 15 )

HSP 1 Score: 125.6 bits (314), Expect = 2.5e-29
Identity = 53/82 (64.63%), Postives = 67/82 (81.71%), Query Frame = 0 

Query: 26  VSYDSNAIIINGERRVIFSGSIHYPRSTDAMWPDLIQKAKDGGLDAIETYIFWDRHEPQR 85
           VS+D  AI I+G RRV+ SGSIHYPRST  MWPDLI+K K+G LDAIETY+FW+ HEP R
Sbjct: 45  VSHDGRAITIDGHRRVLLSGSIHYPRSTTEMWPDLIKKGKEGSLDAIETYVFWNAHEPTR 104

Query: 86  RKYDFSGHLNFIKFFQLVQDAG 108
           R+YDFSG+L+ I+F + +Q+ G
Sbjct: 105 RQYDFSGNLDLIRFLKTIQNEG 126

The following BLAST results are available for this feature:
BLAST of Clc04G00350 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0060182.14.2e-5089.72beta-galactosidase-like [Cucumis melo var. makuwa][more]
XP_008444022.11.2e-4988.79PREDICTED: beta-galactosidase-like [Cucumis melo][more]
TYK04229.11.2e-4988.79beta-galactosidase-like [Cucumis melo var. makuwa][more]
KAE8653552.12.7e-4989.72hypothetical protein Csa_007631 [Cucumis sativus][more]
XP_038896535.16.7e-4886.92beta-galactosidase 15-like [Benincasa hispida][more]
BLAST of Clc04G00350 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SCV55.3e-3262.50Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2[more]
Q8RUV93.5e-3157.84Beta-galactosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0533400 PE... [more]
P496761.0e-3059.38Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1[more]
Q67VU71.3e-3057.43Putative beta-galactosidase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g... [more]
Q7G3T86.5e-3057.43Beta-galactosidase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0330600 P... [more]
BLAST of Clc04G00350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UWH02.0e-5089.72Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold542G0... [more]
A0A5D3C1I95.9e-5088.79Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold758G0... [more]
A0A1S3BA815.9e-5088.79Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103487469 PE=3 SV=1[more]
A0A5D3DUP41.2e-4786.92Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G0... [more]
A0A5A7V9Y91.2e-4786.92Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0... [more]
BLAST of Clc04G00350 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G20710.13.8e-3362.50beta-galactosidase 7 [more]
AT2G28470.18.7e-3051.40beta-galactosidase 8 [more]
AT2G28470.28.7e-3051.40beta-galactosidase 8 [more]
AT3G13750.11.5e-2959.57beta galactosidase 1 [more]
AT1G31740.12.5e-2964.63beta-galactosidase 15 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001944Glycoside hydrolase, family 35PRINTSPR00742GLHYDRLASE35coord: 57..75
score: 68.73
coord: 36..53
score: 63.73
IPR001944Glycoside hydrolase, family 35PANTHERPTHR23421BETA-GALACTOSIDASE RELATEDcoord: 18..108
NoneNo IPR availableGENE3D3.20.20.80Glycosidasescoord: 17..109
e-value: 3.0E-33
score: 117.5
NoneNo IPR availablePANTHERPTHR23421:SF169BNACNNG71570D PROTEINcoord: 18..108
IPR031330Glycoside hydrolase 35, catalytic domainPFAMPF01301Glyco_hydro_35coord: 33..107
e-value: 1.5E-27
score: 97.1
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 23..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc04G00350.1Clc04G00350.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0048046 apoplast
cellular_component GO:0005773 vacuole
molecular_function GO:0004565 beta-galactosidase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds