Clc04G00240 (gene) Watermelon (cordophanus) v2

Overview
NameClc04G00240
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionnon-specific phospholipase C4
LocationClcChr04: 998595 .. 1003396 (+)
RNA-Seq ExpressionClc04G00240
SyntenyClc04G00240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGTGGCGTTCGAAAGTGTCCGAACTTGCAGAACTGGGAAAATAAATCTCTGCAATCCTCTGTAAGAACATTTCTGTGATCTCTGCCATCTTTGCAGATTTGGGATAATTTTGGGAAAACTATAGCTAAGCAGACAAGGAAAATAAATCTCTGCGATCCTCTGTAAGAACATTTGTTCTAAACCTACGCAAAATTTTAAATAGGACTCCATTACTGTAATCAATCTCTAAATCTAATATTCAAAATTAATTTCAAAATACACACACAGACACAAGGAAAAACTCAAGTACCATAGGCTGAAAGTATGAATGGTGTCTTAATGTAATAGGACAGCAGATGAGGAGAGCCTACTGTGAAAGGATAAAGAAAGAGTGAGAAGAAAGGTTAGTAATATATTGATAGACATTTCACCAAGGGTCCAAGTCAACAAAACTGTTGACAAAAACTTTATGGCGCAAACTGAATTTTATTGTGATTTATGAGCTTCCTTTACATGGTATAGAAATTTATGGAAATTTCTCCTTTTAGTATTATTATGAACAAAATTTTATAATGGAATTGGACCAATCTTGAAATATAGAAAAAGAAACCTAGAGAGAGTTGAAAGTGATACCCTCGTCCTTTCTTGTTCTGTGTATGGTTCTCAAGATTAATTAGCTTTCCAATTACAAGTTAAAAGATTTGATTTTGATTTTGTGTATTTGAATCTTTTAATTGCAAACGATGACTCAGATGAACAGTCTTCTCCCCCATTTATCTTATGGAAATTGCTTGTAAAACAATAATAGAAACATACACAAACTGAGTAACATGCAGCTAAACAGACACAAAATCCCTCTAACAATAATAACCAAAAAATGAAGGAAAAAAAAAAGGAAAAGTCCACTCTCAGAGTTAAGATCCAACACTAAAACTAGCAATAATCTTCAGAAACGGATGAAACAATGTAGAAATCCAATGAACCGCAAAACAAAGTTTAAAAATATCTGATCCTAGTGGTGAGCATGTTGTGAAATTGATCCTTTTCAGCTGTACAATCTAATCCTTAGAGCTAATATTTCTAATCCTTATATAACGGTAGCTGCAAAGATAGAATTCACTTAGTTCACTTAGAGCCAAATTCTCTTATCCTCACCTGGGTTGTGTATTCTTCCCGATAAGCAAAAGATCACTACGTTCTTCCATTTCCAAATAAGTAAGCACCCTCCCTCTCATTGTATCTCTTACTGACAATACTTTTGATCATGCTATCTCATTCAAATAACAGCAAAGTACACTAGTTTGATCATGCTTTAGTTGAAGAACCATGAATTTTTTGGTTTTGGAAGAGATGAGAAGTTGACACATGAACAATAGAGAAAAAATGATTTTCCCTTCATTTATCTCCACCACCGACTAAACCAAATAATTTTCCCCACTTTCATCATTTTTTTCCTTTTTTTTTTTTTTAAATTATTCCACTAAGTTAATTTAACTTATAGATTTTCATTTAATTAATAATAACAAATACTAATGCTAATAATAAGAATATTAATGATAATAATAATTCTTAATAGCATCATTTAACCTGGATCCAAATGGTGATTACCTTAAGTTTTTTTATATGCTCAATTAGCATATCAAAATAAATCCCATAGCTTAGCAATTCTGGCAAGAATTTAGAGTTAAAATTAGGGCTTACACCTCTCCTATTTTCTTTTCCCTCTCAAATTTTGTTTTTCACTTTCTCTTATGATATGATCAATTAGAAAATGAAAAATAAAAACCCTAACTCCAAACCTAGTTTTTTTTTTCTCCATTTCTCCTTTTCCTTCCCCTTCTCCTTCCTCTTTCTTATTCTTCTTCTTCCTCTTCCTCTCTCATTCTCCCTTGGCCCCTTCTAAAAACCTTGAAACTACTTATTCTCTCCTCCCTGCGTAAACCATCCGAACATTTCTTCCACCTTTGACGTTTCCTAGGGCTTTGTTCAGCAATTTCAGCTTTCATCTTCTCTCAAGCACACATCAAAGTTATTCTTTCTTCCATTACGCTCTCTTCAGCTTTCGTTTCCTCTGATTCTTGGCGCTTCGCGTCCAATTTTTGTGCATTTCATTGTCCCATTTTTGTGCATTCCACTGTCAGGACCATAATTTTGATTCTTCAACAAGTATTTCAGAAGATGTCTATGAAGCTCTAAGATCCAGCCCATAATGGAACGAAACCCTGTTCTTGATCACCTACGACAGGCACGATGCGTTCTTCGACCACGTTTCTCCTCCCGCTGTTGGAGTTCCCAAACCCGACGGCCAAGTTGGCCCTCCGCCGTTCAATTTCAAATTCAATCGCCTCGGAGTTAGGGTTCCGACCTTCTTTGTCTCTCCTTGGATGAACATGGAACAGGTATTTTCTTTTGGTTTTTGAATATGTGAATTGTGATTTACCGGCTCTGTTTGTTTGTTTTAGGATACTTGGTGTTCGATAATTCGAATTGAACGTGTGGTTTTGAGTTTTTTTCAAATAATTAATTAGAAGGAAATGAGAAGTTTGCAGAGTTTCAAGTAACATTAAAGGCATTTTTTGATTTTGTGTATTCTTCAAATAATTTAAGGATAGTATCTCACTCATAAGAGGAACGTTTCTTTAATACACATAAAATGCTTTGATAACTTCCCCAACTAGTGTACTTTGCTGTTATTTGAATGAGATAGCATGATCAAAAGTATTGTCAGTAAGAGATACAATGAGAGGGAGGGTGCTTACTTATTTGGAAAAAATGGTGAAGATTTGAGTTGATTGGAGTTGAATTTTGAAGGAAAAAATGGTGAAAATCAAAGAGTTTGAAGCTAGTCTGAAATTCAAGCAAATTTGGACAGGTTGACAGGAGATGTTGTAAAAAGGTCGATGTATACTGTCATCACATCTTTCCTATGTTAAGAGGGTAACTTGGGAGGGGTGTGACAAGTTGGTATCAGAGCGTAAGATTTTGGGAAGAGAGATCATATGGTGTAACATAGAGCATGTCGAGTGTATAATATAGTAAAGTTATAAGAAACATAAATGACGGACAGACGAGGTAGGCAAGCAAACGCCAGAACTTTGCAAGCTAGCAGAGGCTTTAGAGAGGTTCAAATGGAGATTCTATTAATCCTCAAGCAGGTATGTGTATGTAAAACCCAATATTCAGTAGTGAGGTTTCTGATGTGATTATTATTTCAGGATTTGCCACTATTGATGGTACTAGGTATGTGTGAACTCAGCAGGGTCACATGTTCTTTAATTACATTGAGCATGTGTGAGCTATGCTAATCCATATGTTTAGCATGCCACAGTATGGTAAACCTGGGTATGACTACAGGATAAGTATTATCATAGGCTTTTTTGCAATTTTAAGAAGAGTTTTGAGGTTGATTCAAGGGATCATGTTTGTTATAAACTATAGGAAGAGGTTTACTAAGTTAGTAAGGTAAGATATGACAATCATAGCTAATGGGCTAGATATGTGCAAGTGGTTTGAGTAAGACTTACGTACGAGGTTTAAGCTTGTAGAAGAGGAATTGTACTCTAGTGATTAGTGAGTACGATGGTTTAGTTTTGGTAAGTTAGTTTATGTTGTATAAGAGTTAAGGAAATTCTAGTTGGGAAGAAAGATCAGAAAGTTGTAAGAGAGAGATTATTCTCAACTAAAGTCAGGAAATGAAGTTAGCATCAAGTAGTATACTCAAATTATAAACCAGTCGAAGTTGAAGTAGCGGTTGGTGAAGGCAGTGATAGTATAAGACGGAAAGGTATGGTATGCAGACAAAAGCAATAAGAAAAGGTATGTCATGGCTCAGTAAGAAGCTGAGGAGGCTTCAAGTATTATGATAGGAGTATTACTTATTGGTATGCATACAATATAAGGGGTTGATTCCTCGGGTGTCTGCTAGTGTCCATCCAATGACCCGAACATATTTCTTTAATATCTGCAGCAATGGCTTTTCACGTTCTAGGCTTAGCGTAGAGGAGATGATCATAGGTAGCGTACTCTTCTCTCCTAAGTATGCGTACTTTAGATGCGCTAGTAGGGCTCTTAGTTCTAAGGTTGGTGGCTCTTCCAAAGATGACTTCGTTTTTAAGGTCATGTAGTTCTCAGGTCCGATCGTTCGAAAGTTTTATCAAACTCAAAAATTAGGTTGATTTTTTTTCTTCACTCTCTTCTTCTCCACAAACGTCCCCACACTCTCTGACTTTGCATCCATGGTTATCATACTTTCATAGTTGATGTCTTCTACCAACTTGAAAGATTCAAACTAATCAGAATATTTCAATGCGTTAAATACGTTGAATTTTACCTGTTGGTCGTCAACGCGGATTGTCAGTTCTCCCTCTTGGACATCTATCAACGCATGCGCAGTAGCTAAAAAAGGTCCTCCCATAATGATTGGTGTTTCCCTATCGGCTTCATAGTCCAGAATGATGAAGTCCGCCGGGAAAATGAATTTGTCAACCTTGACTAAAACATCCTCTATCTTTCCTTCAGGATGTTTGATTGATCGATCAACCAGCTATAGTGTTACTGTAGTGGGTCTTGCCTCATCAATCCCCAATTTCTTGAAGATGGATAATGGCATCAAGTTGATGTTAGCCCCAAGATCGCATAATGCTTGGCCGACATCCATTCCCCCTATCGAGCAAGGCAACATAAAACTTCCAGGATCCTTCATTTTTGCAGGGATATTTTTCTTGAATAATCCACTGCATTCCTATGTTAGAGTGACCGTCTCAAATTCTTCGAGTCGCCTCTTCTTAAAAAGGATGTCTTTGAGGAATTTTACGTAA

mRNA sequence

ATGTTGGGTGGCGTTCGAAAGTGTCCGAACTTGCAGAACTGGGAAAATAAATCTCTGCAATCCTCTGGCTTTGTTCAGCAATTTCAGCTTTCATCTTCTCTCAAGCACACATCAAAGACCATAATTTTGATTCTTCAACAAGTATTTCAGAAGATGCACGATGCGTTCTTCGACCACGTTTCTCCTCCCGCTGTTGGAGTTCCCAAACCCGACGGCCAAGTTGGCCCTCCGCCGTTCAATTTCAAATTCAATCGCCTCGGAGTTAGGGTTCCGACCTTCTTTGTCTCTCCTTGGATGAACATGGAACAGGGGTTGATTCCTCGGGTGTCTGCTAGTGTCCATCCAATGACCCGAACATATTTCTTTAATATCTGCAGCAATGGCTTTTCACGTTCTAGGCTTAGCGTAGAGGAGATGATCATAGGTAGCGTACTCTTCTCTCCTAAGTATGCGTACTTTAGATGCGCTAGTAGGGCTCTTAGTTCTAAGGTTGGTGGCTCTTCCAAAGATGACTTCGTTTTTAAGTCCAGAATGATGAAGTCCGCCGGGAAAATGAATTTGTCAACCTTGACTAAAACATCCTCTATCTTTCCTTCAGGATGTTTGATTGATCGATCAACCAGCTATAGTGTTACTGTAGTGGGTCTTGCCTCATCAATCCCCAATTTCTTGAAGATGGATAATGGCATCAAGTTGATGTTAGCCCCAAGATCGCATAATGCTTGGCCGACATCCATTCCCCCTATCGAGCAAGGCAACATAAAACTTCCAGGATCCTTCATTTTTGCAGGGATATTTTTCTTGAATAATCCACTGCATTCCTATGTTAGAGTGACCGTCTCAAATTCTTCGAGTCGCCTCTTCTTAAAAAGGATGTCTTTGAGGAATTTTACGTAA

Coding sequence (CDS)

ATGTTGGGTGGCGTTCGAAAGTGTCCGAACTTGCAGAACTGGGAAAATAAATCTCTGCAATCCTCTGGCTTTGTTCAGCAATTTCAGCTTTCATCTTCTCTCAAGCACACATCAAAGACCATAATTTTGATTCTTCAACAAGTATTTCAGAAGATGCACGATGCGTTCTTCGACCACGTTTCTCCTCCCGCTGTTGGAGTTCCCAAACCCGACGGCCAAGTTGGCCCTCCGCCGTTCAATTTCAAATTCAATCGCCTCGGAGTTAGGGTTCCGACCTTCTTTGTCTCTCCTTGGATGAACATGGAACAGGGGTTGATTCCTCGGGTGTCTGCTAGTGTCCATCCAATGACCCGAACATATTTCTTTAATATCTGCAGCAATGGCTTTTCACGTTCTAGGCTTAGCGTAGAGGAGATGATCATAGGTAGCGTACTCTTCTCTCCTAAGTATGCGTACTTTAGATGCGCTAGTAGGGCTCTTAGTTCTAAGGTTGGTGGCTCTTCCAAAGATGACTTCGTTTTTAAGTCCAGAATGATGAAGTCCGCCGGGAAAATGAATTTGTCAACCTTGACTAAAACATCCTCTATCTTTCCTTCAGGATGTTTGATTGATCGATCAACCAGCTATAGTGTTACTGTAGTGGGTCTTGCCTCATCAATCCCCAATTTCTTGAAGATGGATAATGGCATCAAGTTGATGTTAGCCCCAAGATCGCATAATGCTTGGCCGACATCCATTCCCCCTATCGAGCAAGGCAACATAAAACTTCCAGGATCCTTCATTTTTGCAGGGATATTTTTCTTGAATAATCCACTGCATTCCTATGTTAGAGTGACCGTCTCAAATTCTTCGAGTCGCCTCTTCTTAAAAAGGATGTCTTTGAGGAATTTTACGTAA

Protein sequence

MLGGVRKCPNLQNWENKSLQSSGFVQQFQLSSSLKHTSKTIILILQQVFQKMHDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWMNMEQGLIPRVSASVHPMTRTYFFNICSNGFSRSRLSVEEMIIGSVLFSPKYAYFRCASRALSSKVGGSSKDDFVFKSRMMKSAGKMNLSTLTKTSSIFPSGCLIDRSTSYSVTVVGLASSIPNFLKMDNGIKLMLAPRSHNAWPTSIPPIEQGNIKLPGSFIFAGIFFLNNPLHSYVRVTVSNSSSRLFLKRMSLRNFT
Homology
[Close]
BLAST of Clc04G00240 vs. NCBI nr
Match: KAA0056500.1 (photosystem II CP47 reaction center protein-like [Cucumis melo var. makuwa] >TYK29022.1 photosystem II CP47 reaction center protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-17
Identity = 53/84 (63.10%), Postives = 61/84 (72.62%), Query Frame = 0 

Query: 179 MKSAGKMNLSTLTKTSSIFPSGCLIDRSTSYSVTVVGLASSIPNFLKMDNGIKLMLAPRS 238
           MKSA  MNLSTLT TSSIFP GC++D S + S TVVG A  IP+FLK+D  IKL+LAPR 
Sbjct: 1   MKSARNMNLSTLTNTSSIFPFGCVMDLSANCSATVVGFAFPIPDFLKIDGDIKLILAPRL 60

Query: 239 HNAWPTSIPPIEQGNIKLPGSFIF 263
           H+AWP SIP IE   +KL  S  F
Sbjct: 61  HSAWPRSIPSIEHRIVKLLSSSPF 84

[Close]
BLAST of Clc04G00240 vs. NCBI nr
Match: XP_038875468.1 (non-specific phospholipase C3-like [Benincasa hispida])

HSP 1 Score: 89.0 bits (219), Expect = 7.7e-14
Identity = 36/47 (76.60%), Postives = 41/47 (87.23%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWM 100
           H  FFDHV PP+ GVP PDG++GPPPFNFKF+RLGVRVPT FVSPW+
Sbjct: 306 HGGFFDHVPPPSTGVPNPDGRLGPPPFNFKFDRLGVRVPTVFVSPWI 352

[Close]
BLAST of Clc04G00240 vs. NCBI nr
Match: KAG7575854.1 (Phosphoesterase [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 87.8 bits (216), Expect = 1.7e-13
Identity = 38/66 (57.58%), Postives = 48/66 (72.73%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWMNMEQGLIPRVSAS 112
           H  F+DHV  P VGVP PDG +GPPP+NF+FNRLGVRVP FF+SPW  +E G I    + 
Sbjct: 301 HGGFYDHVPTPVVGVPNPDGILGPPPYNFEFNRLGVRVPAFFISPW--IEPGTIIHGPSG 360

Query: 113 VHPMTR 119
            +PM++
Sbjct: 361 PYPMSQ 364

[Close]
BLAST of Clc04G00240 vs. NCBI nr
Match: XP_023000253.1 (LOW QUALITY PROTEIN: non-specific phospholipase C3-like [Cucurbita maxima])

HSP 1 Score: 87.4 bits (215), Expect = 2.2e-13
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWM 100
           H  FFDHV PP VGVP PDG+VGPPP+NF F+RLGVRVPT FVSPW+
Sbjct: 302 HGGFFDHVPPPLVGVPNPDGRVGPPPYNFMFDRLGVRVPTVFVSPWI 348

[Close]
BLAST of Clc04G00240 vs. NCBI nr
Match: XP_016715493.1 (non-specific phospholipase C1-like isoform X2 [Gossypium hirsutum])

HSP 1 Score: 85.9 bits (211), Expect = 6.5e-13
Identity = 37/63 (58.73%), Postives = 43/63 (68.25%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWMNMEQGLIPRVSAS 112
           H  F+DHV  P  GVP PDG VGP PF FKFNRLGVRVPT  VSPW++     +P V+ S
Sbjct: 319 HGGFYDHVPTPVSGVPNPDGIVGPDPFYFKFNRLGVRVPTLLVSPWIDKATETLPEVTTS 378

Query: 113 VHP 116
           + P
Sbjct: 379 LRP 381

[Close]
BLAST of Clc04G00240 vs. ExPASy Swiss-Prot
Match: Q9SRQ7 (Non-specific phospholipase C4 OS=Arabidopsis thaliana OX=3702 GN=NPC4 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.5e-15
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWM 100
           H  F+DHV  P  GVP PDG +GPPP+NF+FNRLGVRVPTFF+SPW+
Sbjct: 301 HGGFYDHVPTPVDGVPNPDGILGPPPYNFEFNRLGVRVPTFFISPWI 347

[Close]
BLAST of Clc04G00240 vs. ExPASy Swiss-Prot
Match: Q9S816 (Non-specific phospholipase C5 OS=Arabidopsis thaliana OX=3702 GN=NPC5 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 7.2e-15
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWM 100
           H  F+DHV  P  GVP PDG +GPPP+NF+FNRLGVRVPTFF+SPW+
Sbjct: 300 HGGFYDHVPTPLDGVPNPDGILGPPPYNFEFNRLGVRVPTFFISPWI 346

[Close]
BLAST of Clc04G00240 vs. ExPASy Swiss-Prot
Match: Q9SRQ6 (Non-specific phospholipase C3 OS=Arabidopsis thaliana OX=3702 GN=NPC3 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 6.7e-13
Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 44  ILQQVFQKMHDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWM 100
           IL  V    H  ++DHV  P +GVP PDG VGP P+NFKF+RLGVRVP   +SPW+
Sbjct: 292 ILFVVVYDEHGGYYDHVPTPVIGVPNPDGLVGPEPYNFKFDRLGVRVPALLISPWI 347

[Close]
BLAST of Clc04G00240 vs. ExPASy Swiss-Prot
Match: Q8L7Y9 (Non-specific phospholipase C1 OS=Arabidopsis thaliana OX=3702 GN=NPC1 PE=2 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.0e-12
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWMNMEQGLI 107
           H  F+DHV  P  GVP PDG +GP PF F F+RLGVRVPTF +SPW  +E+G +
Sbjct: 316 HGGFYDHVPTPVKGVPNPDGIIGPDPFYFGFDRLGVRVPTFLISPW--IEKGTV 367

[Close]
BLAST of Clc04G00240 vs. ExPASy Swiss-Prot
Match: Q8H965 (Non-specific phospholipase C6 OS=Arabidopsis thaliana OX=3702 GN=NPC6 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.6e-12
Identity = 39/83 (46.99%), Postives = 47/83 (56.63%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWMN----MEQGLIPR 112
           H  F+DHV  P VG+P PDG  GP P  FKF+RLGVRVPT  VSPW+     + +   P 
Sbjct: 314 HGGFYDHVKTPYVGIPNPDGNTGPAPGFFKFDRLGVRVPTIMVSPWIQKGTVVSEAKGPT 373

Query: 113 VSA----SVHPMTRTYFFNICSN 128
            S+    S  P T    FN+ SN
Sbjct: 374 ESSEYEHSSIPATIKKLFNLSSN 396

[Close]
BLAST of Clc04G00240 vs. ExPASy TrEMBL
Match: A0A5D3DZH8 (Photosystem II CP47 reaction center protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G001330 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 9.4e-18
Identity = 53/84 (63.10%), Postives = 61/84 (72.62%), Query Frame = 0 

Query: 179 MKSAGKMNLSTLTKTSSIFPSGCLIDRSTSYSVTVVGLASSIPNFLKMDNGIKLMLAPRS 238
           MKSA  MNLSTLT TSSIFP GC++D S + S TVVG A  IP+FLK+D  IKL+LAPR 
Sbjct: 1   MKSARNMNLSTLTNTSSIFPFGCVMDLSANCSATVVGFAFPIPDFLKIDGDIKLILAPRL 60

Query: 239 HNAWPTSIPPIEQGNIKLPGSFIF 263
           H+AWP SIP IE   +KL  S  F
Sbjct: 61  HSAWPRSIPSIEHRIVKLLSSSPF 84

[Close]
BLAST of Clc04G00240 vs. ExPASy TrEMBL
Match: A0A6J1KM42 (LOW QUALITY PROTEIN: non-specific phospholipase C3-like OS=Cucurbita maxima OX=3661 GN=LOC111494535 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-13
Identity = 36/47 (76.60%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWM 100
           H  FFDHV PP VGVP PDG+VGPPP+NF F+RLGVRVPT FVSPW+
Sbjct: 302 HGGFFDHVPPPLVGVPNPDGRVGPPPYNFMFDRLGVRVPTVFVSPWI 348

[Close]
BLAST of Clc04G00240 vs. ExPASy TrEMBL
Match: A0A1U8LPW6 (non-specific phospholipase C1-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=LOC107928748 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.1e-13
Identity = 37/63 (58.73%), Postives = 43/63 (68.25%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWMNMEQGLIPRVSAS 112
           H  F+DHV  P  GVP PDG VGP PF FKFNRLGVRVPT  VSPW++     +P V+ S
Sbjct: 319 HGGFYDHVPTPVSGVPNPDGIVGPDPFYFKFNRLGVRVPTLLVSPWIDKATETLPEVTTS 378

Query: 113 VHP 116
           + P
Sbjct: 379 LRP 381

[Close]
BLAST of Clc04G00240 vs. ExPASy TrEMBL
Match: A0A0B0P5S9 (Phospholipase C 4 OS=Gossypium arboreum OX=29729 GN=F383_10680 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-13
Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWMNMEQGLIPRVSAS 112
           H  F+DHV  P  GVP PDG +GP PF FKFNRLGVRVPT  VSPW++     +P V+ S
Sbjct: 258 HGGFYDHVPTPVSGVPNPDGIIGPDPFYFKFNRLGVRVPTLLVSPWIDKATETLPEVTTS 317

Query: 113 VHP 116
           + P
Sbjct: 318 LRP 320

[Close]
BLAST of Clc04G00240 vs. ExPASy TrEMBL
Match: A0A0A0LN71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G119380 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.4e-13
Identity = 33/47 (70.21%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWM 100
           H  FFDHV PP+ GVP PDG++GPPP+NF F+RLG+RVPT FVSPW+
Sbjct: 146 HGGFFDHVPPPSAGVPNPDGRLGPPPYNFNFDRLGLRVPTIFVSPWI 192

[Close]
BLAST of Clc04G00240 vs. TAIR 10
Match: AT3G03530.1 (non-specific phospholipase C4 )

HSP 1 Score: 83.2 bits (204), Expect = 3.9e-16
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWM 100
           H  F+DHV  P  GVP PDG +GPPP+NF+FNRLGVRVPTFF+SPW+
Sbjct: 301 HGGFYDHVPTPVDGVPNPDGILGPPPYNFEFNRLGVRVPTFFISPWI 347

[Close]
BLAST of Clc04G00240 vs. TAIR 10
Match: AT3G03540.1 (non-specific phospholipase C5 )

HSP 1 Score: 82.8 bits (203), Expect = 5.1e-16
Identity = 33/47 (70.21%), Postives = 39/47 (82.98%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWM 100
           H  F+DHV  P  GVP PDG +GPPP+NF+FNRLGVRVPTFF+SPW+
Sbjct: 300 HGGFYDHVPTPLDGVPNPDGILGPPPYNFEFNRLGVRVPTFFISPWI 346

[Close]
BLAST of Clc04G00240 vs. TAIR 10
Match: AT3G03520.1 (non-specific phospholipase C3 )

HSP 1 Score: 76.3 bits (186), Expect = 4.8e-14
Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 44  ILQQVFQKMHDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWM 100
           IL  V    H  ++DHV  P +GVP PDG VGP P+NFKF+RLGVRVP   +SPW+
Sbjct: 292 ILFVVVYDEHGGYYDHVPTPVIGVPNPDGLVGPEPYNFKFDRLGVRVPALLISPWI 347

[Close]
BLAST of Clc04G00240 vs. TAIR 10
Match: AT1G07230.1 (non-specific phospholipase C1 )

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-13
Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWMNMEQGLI 107
           H  F+DHV  P  GVP PDG +GP PF F F+RLGVRVPTF +SPW  +E+G +
Sbjct: 316 HGGFYDHVPTPVKGVPNPDGIIGPDPFYFGFDRLGVRVPTFLISPW--IEKGTV 367

[Close]
BLAST of Clc04G00240 vs. TAIR 10
Match: AT3G48610.1 (non-specific phospholipase C6 )

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-13
Identity = 39/83 (46.99%), Postives = 47/83 (56.63%), Query Frame = 0 

Query: 53  HDAFFDHVSPPAVGVPKPDGQVGPPPFNFKFNRLGVRVPTFFVSPWMN----MEQGLIPR 112
           H  F+DHV  P VG+P PDG  GP P  FKF+RLGVRVPT  VSPW+     + +   P 
Sbjct: 314 HGGFYDHVKTPYVGIPNPDGNTGPAPGFFKFDRLGVRVPTIMVSPWIQKGTVVSEAKGPT 373

Query: 113 VSA----SVHPMTRTYFFNICSN 128
            S+    S  P T    FN+ SN
Sbjct: 374 ESSEYEHSSIPATIKKLFNLSSN 396

The following BLAST results are available for this feature:
BLAST of Clc04G00240 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0056500.11.9e-1763.10photosystem II CP47 reaction center protein-like [Cucumis melo var. makuwa] >TYK... [more]
XP_038875468.17.7e-1476.60non-specific phospholipase C3-like [Benincasa hispida][more]
KAG7575854.11.7e-1357.58Phosphoesterase [Arabidopsis thaliana x Arabidopsis arenosa][more]
XP_023000253.12.2e-1376.60LOW QUALITY PROTEIN: non-specific phospholipase C3-like [Cucurbita maxima][more]
XP_016715493.16.5e-1358.73non-specific phospholipase C1-like isoform X2 [Gossypium hirsutum][more]
BLAST of Clc04G00240 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SRQ75.5e-1570.21Non-specific phospholipase C4 OS=Arabidopsis thaliana OX=3702 GN=NPC4 PE=1 SV=1[more]
Q9S8167.2e-1570.21Non-specific phospholipase C5 OS=Arabidopsis thaliana OX=3702 GN=NPC5 PE=1 SV=1[more]
Q9SRQ66.7e-1357.14Non-specific phospholipase C3 OS=Arabidopsis thaliana OX=3702 GN=NPC3 PE=1 SV=1[more]
Q8L7Y92.0e-1259.26Non-specific phospholipase C1 OS=Arabidopsis thaliana OX=3702 GN=NPC1 PE=2 SV=1[more]
Q8H9652.6e-1246.99Non-specific phospholipase C6 OS=Arabidopsis thaliana OX=3702 GN=NPC6 PE=2 SV=1[more]
BLAST of Clc04G00240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DZH89.4e-1863.10Photosystem II CP47 reaction center protein-like OS=Cucumis melo var. makuwa OX=... [more]
A0A6J1KM421.1e-1376.60LOW QUALITY PROTEIN: non-specific phospholipase C3-like OS=Cucurbita maxima OX=3... [more]
A0A1U8LPW63.1e-1358.73non-specific phospholipase C1-like isoform X2 OS=Gossypium hirsutum OX=3635 GN=L... [more]
A0A0B0P5S94.1e-1357.14Phospholipase C 4 OS=Gossypium arboreum OX=29729 GN=F383_10680 PE=4 SV=1[more]
A0A0A0LN715.4e-1370.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G119380 PE=4 SV=1[more]
BLAST of Clc04G00240 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G03530.13.9e-1670.21non-specific phospholipase C4 [more]
AT3G03540.15.1e-1670.21non-specific phospholipase C5 [more]
AT3G03520.14.8e-1457.14non-specific phospholipase C3 [more]
AT1G07230.11.4e-1359.26non-specific phospholipase C1 [more]
AT3G48610.11.8e-1346.99non-specific phospholipase C6 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007312PhosphoesterasePFAMPF04185Phosphoesterasecoord: 53..100
e-value: 4.3E-11
score: 42.6
IPR007312PhosphoesterasePANTHERPTHR31956NON-SPECIFIC PHOSPHOLIPASE C4-RELATEDcoord: 51..101
IPR017850Alkaline-phosphatase-like, core domain superfamilyGENE3D3.40.720.10Alkaline Phosphatase, subunit Acoord: 30..112
e-value: 2.0E-8
score: 36.2
NoneNo IPR availablePANTHERPTHR31956:SF26NON-SPECIFIC PHOSPHOLIPASE C2coord: 51..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc04G00240.1Clc04G00240.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048229 gametophyte development
biological_process GO:0009395 phospholipid catabolic process
biological_process GO:0048364 root development
cellular_component GO:0009507 chloroplast
molecular_function GO:0004629 phospholipase C activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016788 hydrolase activity, acting on ester bonds