Clc03G19200 (gene) Watermelon (cordophanus) v2

Overview
NameClc03G19200
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionZinc finger CCHC domain-containing protein
LocationClcChr03: 31437063 .. 31441369 (+)
RNA-Seq ExpressionClc03G19200
SyntenyClc03G19200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAATCAAATTGAAATGGATAAGAAAAGGGAAGATAGTGGGAAAAAACTATATTTTACTTCAGAAAATGGTGAATGTTCAAGTTTTTCTATAGTCTCTGGTGCAGAAAAGCTTGATGAATATTCAAGAACTCGAACCCTTCCTCAGGTCAATTCTTTTCAATTTTCATGGGATTTCTTTCCTTTTTTTAGTTTTTTTGTTTAATCTTGTTTTCCTTAATTTCTTATTGGATTTCTTTGGGATATCTGTTAAATTTTCTCATGGAAAAATGAGAAACCCTAAAGATATTGATAACAATTTAAAGTACTACTAAAGTTAATTCTTGTGTGCATGCATTGCTTTAATGTTTTCATGGATATGTGCTTGCTTTGTTTTGAGAGATCTTCATTCTCTTTCAATTTCACTGAAAATTGAAAAACCCTAGAAATTCATTTTTGGGATTGGGGCAAATTATTGCACAGAAAAATTTTGAAAATTAATTTTTACCCTTTTTTTTGACCTAATCTAGTGCATATTTGGATTGGCTTTTAAAGTGAGGAGAAGAGTGAAGTAATATATTTTTTTTTTCCGCTCACTTCTTCATTTTTTCATATCCATTTCGATATCTTTTTTTAGAAAGATCTTGGATTTGTTTTCATATCTCTTCTTTTACAGTAAATTGTAAACCCTAAAAATTAGTTTTTGAGATTGGAGATTCTTTTTCTTAGCAAGATATTAGATGATATATAAAAAGGATCAACAGGTACACTAGGCATCTCAACTAGGACTAGTTTGAAGAGATTGGGGCTAATATTAAGTTTTCATGTTGCACCCTTTAAAAGAGATTGGGGCTAATTAATTGACTGGAAAAATTTTGAAAATTAGTTATTTACTTTTATATATATTAATTAATTTTTAAGAATTGGCAAAATTAGATAGAGGAATTTTGAAAATTAGTTCTTTTAACTCATTTTTAAACCTAAACAATTGCATGTTTGGATTGACTTTCTAAGTGAAAAGAAGATTGAAGTAATATATACAATTTCTTCTCTTATTAGTTTTTCTTGTCCATGTCAATATCTGTTGTTCAAAAATCTTGGGTTTGTTTTAAGATCTCTTCTATCCCTTTGAATTTCACTGAAAATTGAAAACCCTAGAAATTAATTTTTGAGATTAGGGCAAATAATTATTAGATAGAAAATTTTTAAAAATTAATTATCTACTAGTTTTTTAACATATTAATGGCTTGTTTGGATTTGATTAAAAAAAATTCACTTAGAATGTTAATCCAACTAGGTTCTGAGATAGTTAAACTAGGGTTAAGTTCAATATCTTTAACTTGGCATTAAACAATTGTCCTTTGGGTTTTTTTTTTTTTTTTATTTTAAGCATCTATCTTAGGCTTTTCTTTTGATTTCTCTGAAAAAAAAAAAAGAAAAAAAAAAGAACTAGCCCTAGTGAGATAAGAGCCTCTATAGGGTAAATTTTTGGCCACTACCCATGAAGATTGAAAACCCCAAAAATTAATATTTGAGACGGGGGCAATTATTAGACAGAAATTTTTTGAAAATATTAATTCTTTACTCATTTTTAAAGCTGTTTAGATTTGCTTAAAGATACATTTCTTTAGTTGCACTTAAAAACACTTACTTAAGCACCTAGAAACCAATCCAAACAAATCTTAAGATAGTTAAACTAGGGTTAATATACAAACAAGAGAAGGTGGAATTGTTCGATAAATATGCAAATTTTAATCATAAACATTTAATGAAATCGAATTATTTAACACGGGTATTGTGTTTGTTTGTTTGTTTTCATTAGGGTGAAAAGACAATTGACGTAGTGATAAAACTTCCGGCAGTTCGTCTCACTTCTCTTCTCGAAGCAATGGAATTAAGAAAGGATACACAAATTTCGATGAAAGCTCCATTTACAAACCTCCAAAATATCTTCAATGGCCGTTCATTAATCCCTCTCCCTACCACAGATGAAGAAGAACAACAAGAATACAATACTGAATCAAATGAAAGAACAGTCACTTCTGGACCAAGCAGCTCTTCCTTTGACCTTCCCCATCCTCCCAGCTTTATTGGTGCTCCTGCCCTTTTCCTTCGTATCGGCACCTGGCAGGTATGATGACGTATTTCCGAGTGATTTTTTCTATCACTTTTGTCTGTTTAAAAGTATATCTTGGAAACCGTCACTCCATCCTATCTTGTTTTAATAATTTTAAGTCAATTTAGGGTTTGATTTTACACTTTTGGGTTTGGGGTATGATGACAGTGCTAAGGATGTATCAATGTAGTTGAGATATCTAGGGGCACCTCTTGATTCATCTTTATCCTCTAGTATCTTGCTCAAAAATTAATAAAGACATGTTTCATAGTGATATTGAATTTAACAAAATTGATTTTAACTATTTCAAAATCACTCCCAAACATGAAATAAATAAACAAGTCAAAAGAAATTGTGTTCTATATTAATTTCATTTCTCATTTTTCTTCTATTGGCAATTTGATTTTGCAGGTAGTGGCCAAACATGAAGGTGATTTGGTTTTGAAATTTGATTATAAAAACAAGAAGATATATTGGGAGGTTGTGAGGCAAGGGCCTTCCAGGCACAAGATTGAAGTTGATTGGTCTAATATCATAGGAATTGAAGCTGCCATTGAAGATCATAGACAAGGAATCCTCCAACTTGAGGTATTGAAATTTAGTTATTGCTTTTCTAAATTGTTGAGACTTTGGGTGTGATCGTGCCAACAGTAACGCATCGGATCTCATCAAAACTATACAATTAAGCATACTTGGGCGAGAGTAGTACTAAATTGCATGATCACTTGAGAAATCCTCGTGTTGCACACTTTTATAAAAAGTACAAATAATATAAAATAAATAAAATGAAAAACTTGCTGAGAGGGTTTGATGCTTGGAGATAACCCTTTTCAAAATGGGAATTTTGTGCTTATTTATAAAATTATGTTTACATAATCATCACACTTTGTTTGATGTTTTATCTTTCATGTATGAACTTAATTTTTAGAATATATGATCAGGTTAGTTGTTTTTTTAAAAAAAAGAAAAATTATTGAAAGTTTGATGCTTGAAACCCTTTCAAATTTAGATCATATCACTTTCTTTTAGGGTTTCTTTTTCTTGTACAAATGAGTTGTTCTGTTTTTGCATAGAAGAACTTTGTGCCCTTTGACTTATTGATCACCCATTATTTGGTCTTTTGTTATTATTTTAAAAACTTAAAGACCAAGATGTTTTTGAAGCCTTTTCAAAATGGAAAATCTTTGCCATTAAGAAAAAAAAATCAATGAAAATGTCTTAGATAACACTTTCTTTAGGGTTTTTTTTTTTTTTTTTTGTCATTTTTTAATGATTGGTTTATTTGTAGAACAAATTATGATGCTATTCTCTTCTATTCAAAATTAAGGGTTTGTAAATAGTAATTTTGTGCATAATAGTAATGTTAATTTTCCTTTTTTTTCATGGACAATTTTTTTTTTTTTGAGCAAATGATTTTATTCTTCTTTAAAAAAAAAGCAAGAAAAAAAAAAGGAAACAAAGAATTAAAATATAATAATGACTAGCAAACCTAGCTGATGTTGAGAAGTAATGGGAAAAATTCAATCAATAATCTGAAACTTTTTACAGATAAAATTTCAATAAAAAAAAAATATGTTCATATTCAATATAAATTGTTGTAATTTTCCCCCTTTTGAAGCTGCAAAACCCACCAAGATTCTACAAGGAGATTGAATCCGGACCACTGAAGCATTTCAAATGGGAAAATGAAGCAGATTTTACTGGAGGTAGAGCTTCTATGAACAGGTAATTAATTCAGCTCAAAAGGGACTCTTTTTATTCACATAATGATACCTTTAAATGTGATATCTCAACATTTAATTAATAATTCAATTGCTAACTATGTAATGGAATAGAAATTACCAAGTTGGAAATTTTGAAACTTACAAACAGTAAGTGAAAATGGATGTATACTGAATAACCCAAATGAAAGGTTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTCTTCATTTTGTTTGTTTAAAAACATGTGGGGTTAGGGTTTTCAAACTTTTGACTTATTGATCGAGTTAAATTATGTTGAAGTTGGTTAACGATTTTATATACTAATTTAAATGTTTATGAAACTTTTTTTCAGGAAACACTTTTCAGTGTTTCCACCAGGAGTACTTGGTGTACATTATAAGAGATTGATGAAGAACAAGAATTTGCTAGAAATAAGCCAAAAGCCATTTCCAACAGCTGATTCCCCTTATTTCTCCCAGCATTAG

mRNA sequence

AAAAAAAATCAAATTGAAATGGATAAGAAAAGGGAAGATAGTGGGAAAAAACTATATTTTACTTCAGAAAATGGTGAATGTTCAAGTTTTTCTATAGTCTCTGGTGCAGAAAAGCTTGATGAATATTCAAGAACTCGAACCCTTCCTCAGGGTGAAAAGACAATTGACGTAGTGATAAAACTTCCGGCAGTTCGTCTCACTTCTCTTCTCGAAGCAATGGAATTAAGAAAGGATACACAAATTTCGATGAAAGCTCCATTTACAAACCTCCAAAATATCTTCAATGGCCGTTCATTAATCCCTCTCCCTACCACAGATGAAGAAGAACAACAAGAATACAATACTGAATCAAATGAAAGAACAGTCACTTCTGGACCAAGCAGCTCTTCCTTTGACCTTCCCCATCCTCCCAGCTTTATTGGTGCTCCTGCCCTTTTCCTTCGTATCGGCACCTGGCAGGTAGTGGCCAAACATGAAGGTGATTTGGTTTTGAAATTTGATTATAAAAACAAGAAGATATATTGGGAGGTTGTGAGGCAAGGGCCTTCCAGGCACAAGATTGAAGTTGATTGGTCTAATATCATAGGAATTGAAGCTGCCATTGAAGATCATAGACAAGGAATCCTCCAACTTGAGCTGCAAAACCCACCAAGATTCTACAAGGAGATTGAATCCGGACCACTGAAGCATTTCAAATGGGAAAATGAAGCAGATTTTACTGGAGGTAGAGCTTCTATGAACAGGAAACACTTTTCAGTGTTTCCACCAGGAGTACTTGGTGTACATTATAAGAGATTGATGAAGAACAAGAATTTGCTAGAAATAAGCCAAAAGCCATTTCCAACAGCTGATTCCCCTTATTTCTCCCAGCATTAG

Coding sequence (CDS)

ATGGATAAGAAAAGGGAAGATAGTGGGAAAAAACTATATTTTACTTCAGAAAATGGTGAATGTTCAAGTTTTTCTATAGTCTCTGGTGCAGAAAAGCTTGATGAATATTCAAGAACTCGAACCCTTCCTCAGGGTGAAAAGACAATTGACGTAGTGATAAAACTTCCGGCAGTTCGTCTCACTTCTCTTCTCGAAGCAATGGAATTAAGAAAGGATACACAAATTTCGATGAAAGCTCCATTTACAAACCTCCAAAATATCTTCAATGGCCGTTCATTAATCCCTCTCCCTACCACAGATGAAGAAGAACAACAAGAATACAATACTGAATCAAATGAAAGAACAGTCACTTCTGGACCAAGCAGCTCTTCCTTTGACCTTCCCCATCCTCCCAGCTTTATTGGTGCTCCTGCCCTTTTCCTTCGTATCGGCACCTGGCAGGTAGTGGCCAAACATGAAGGTGATTTGGTTTTGAAATTTGATTATAAAAACAAGAAGATATATTGGGAGGTTGTGAGGCAAGGGCCTTCCAGGCACAAGATTGAAGTTGATTGGTCTAATATCATAGGAATTGAAGCTGCCATTGAAGATCATAGACAAGGAATCCTCCAACTTGAGCTGCAAAACCCACCAAGATTCTACAAGGAGATTGAATCCGGACCACTGAAGCATTTCAAATGGGAAAATGAAGCAGATTTTACTGGAGGTAGAGCTTCTATGAACAGGAAACACTTTTCAGTGTTTCCACCAGGAGTACTTGGTGTACATTATAAGAGATTGATGAAGAACAAGAATTTGCTAGAAATAAGCCAAAAGCCATTTCCAACAGCTGATTCCCCTTATTTCTCCCAGCATTAG

Protein sequence

MDKKREDSGKKLYFTSENGECSSFSIVSGAEKLDEYSRTRTLPQGEKTIDVVIKLPAVRLTSLLEAMELRKDTQISMKAPFTNLQNIFNGRSLIPLPTTDEEEQQEYNTESNERTVTSGPSSSSFDLPHPPSFIGAPALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPSRHKIEVDWSNIIGIEAAIEDHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTGGRASMNRKHFSVFPPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYFSQH
Homology
BLAST of Clc03G19200 vs. NCBI nr
Match: XP_022961562.1 (uncharacterized protein LOC111462107 [Cucurbita moschata] >XP_023516882.1 uncharacterized protein LOC111780650 [Cucurbita pepo subsp. pepo] >KAG6590487.1 hypothetical protein SDJN03_15910, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 406.8 bits (1044), Expect = 1.6e-109
Identity = 200/282 (70.92%), Postives = 236/282 (83.69%), Query Frame = 0

Query: 3   KKREDSGKKLYFTSENGECSSFSIVSGAEKLDEYSRTRTLPQGEKTIDVVIKLPAVRLTS 62
           KK E+S KK+YFTSENGE SSF I+SGA+KLD +S+T TLP+GE+TI+VV+KLPA+RL+S
Sbjct: 4   KKGEESEKKMYFTSENGESSSFPIISGADKLDHFSKTGTLPEGEETIEVVLKLPALRLSS 63

Query: 63  LLEAMELRKDTQISMKAPFTNLQNIFNGRSLIPLPTTDEEEQQEYNTESNERTVTSGPSS 122
           LL AMEL KDT+IS+  PFTNL +I  G SLIPLP T EE  Q+YN  S+ERT+TSGPSS
Sbjct: 64  LLAAMELEKDTKISLPPPFTNLPSILTGHSLIPLPPTSEE--QQYNNPSHERTITSGPSS 123

Query: 123 SSFDLPHPPSFIGAPALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPSRHKIE 182
           SS        F G  ALFLR+G+WQVV K++GDLVLKFDY+NKK+ WE+VR+GPS+HKIE
Sbjct: 124 SSSSELPQLVFNGVLALFLRVGSWQVVPKNDGDLVLKFDYRNKKVTWEIVREGPSKHKIE 183

Query: 183 VDWSNIIGIEAAIEDHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTGGRASMNR 242
           +DWSNIIGIEAAIEDHRQGILQLELQ PPRFYKEIES P K  KW +E+DFT GRAS+NR
Sbjct: 184 IDWSNIIGIEAAIEDHRQGILQLELQKPPRFYKEIESKPHKQPKWADESDFTDGRASLNR 243

Query: 243 KHFSVFPPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYFSQ 285
           ++F+VF PGVLG HYKRLMKNK+LLE+SQK FPT  SPYF Q
Sbjct: 244 RYFAVFSPGVLGTHYKRLMKNKHLLEVSQKSFPTTQSPYFPQ 283

BLAST of Clc03G19200 vs. NCBI nr
Match: XP_022968779.1 (uncharacterized protein LOC111467912 [Cucurbita maxima])

HSP 1 Score: 404.4 bits (1038), Expect = 7.9e-109
Identity = 199/282 (70.57%), Postives = 235/282 (83.33%), Query Frame = 0

Query: 3   KKREDSGKKLYFTSENGECSSFSIVSGAEKLDEYSRTRTLPQGEKTIDVVIKLPAVRLTS 62
           KK E+S KK+YFTSENGE SSF I+SGA+KLD +S+T  LP+GE+TI+VV+KLPA+RL+S
Sbjct: 4   KKGEESEKKMYFTSENGESSSFPIISGADKLDHFSKTGALPEGEETIEVVLKLPALRLSS 63

Query: 63  LLEAMELRKDTQISMKAPFTNLQNIFNGRSLIPLPTTDEEEQQEYNTESNERTVTSGPSS 122
           LL AMEL KDT+IS+  PFTNL +I  G SLIPLP T EE  Q+YN  S+ERT+TSGPSS
Sbjct: 64  LLAAMELEKDTKISLPPPFTNLPSILTGHSLIPLPPTSEE--QQYNNPSHERTITSGPSS 123

Query: 123 SSFDLPHPPSFIGAPALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPSRHKIE 182
           SS        F G  ALFLR+G+WQVV K++GDLVLKFDY+NKK+ WE+VR+GPS+HKIE
Sbjct: 124 SSSSELPQLVFNGILALFLRVGSWQVVPKNDGDLVLKFDYRNKKVTWEIVREGPSKHKIE 183

Query: 183 VDWSNIIGIEAAIEDHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTGGRASMNR 242
           +DWSNIIGIEAAIEDHRQGILQLELQ PPRFYKEIES P K  KW +E+DFT GRAS+NR
Sbjct: 184 IDWSNIIGIEAAIEDHRQGILQLELQKPPRFYKEIESKPHKQPKWADESDFTDGRASLNR 243

Query: 243 KHFSVFPPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYFSQ 285
           ++F+VF PGVLG HYKRLMKNK+LLE+SQK FPT  SPYF Q
Sbjct: 244 RYFAVFSPGVLGTHYKRLMKNKHLLEVSQKSFPTTQSPYFPQ 283

BLAST of Clc03G19200 vs. NCBI nr
Match: KAG7024019.1 (hypothetical protein SDJN02_15048, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397.5 bits (1020), Expect = 9.6e-107
Identity = 194/273 (71.06%), Postives = 229/273 (83.88%), Query Frame = 0

Query: 12  LYFTSENGECSSFSIVSGAEKLDEYSRTRTLPQGEKTIDVVIKLPAVRLTSLLEAMELRK 71
           +YFTSENGE SSF I+SGA+KLD +S+T TLP+GE+TI+VV+KLPA+RL+SLL AMEL K
Sbjct: 1   MYFTSENGESSSFPIISGADKLDHFSKTGTLPEGEETIEVVLKLPALRLSSLLAAMELEK 60

Query: 72  DTQISMKAPFTNLQNIFNGRSLIPLPTTDEEEQQEYNTESNERTVTSGPSSSSFDLPHPP 131
           DT+IS+  PFTNL +I  G SLIPLP T EE  Q+YN  S+ERT+TSGPSSSS       
Sbjct: 61  DTKISLPPPFTNLPSILTGHSLIPLPPTSEE--QQYNNPSHERTITSGPSSSSSSELPQL 120

Query: 132 SFIGAPALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPSRHKIEVDWSNIIGI 191
            F G  ALFLR+G+WQVV K++GDLVLKFDY+NKK+ WE+VR+GPS+HKIE+DWSNIIGI
Sbjct: 121 VFNGVLALFLRVGSWQVVPKNDGDLVLKFDYRNKKVTWEIVREGPSKHKIEIDWSNIIGI 180

Query: 192 EAAIEDHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTGGRASMNRKHFSVFPPG 251
           EAAIEDHRQGILQLELQ PPRFYKEIES P K  KW +E+DFT GRAS+NR++F+VF PG
Sbjct: 181 EAAIEDHRQGILQLELQKPPRFYKEIESKPHKQPKWADESDFTDGRASLNRRYFAVFSPG 240

Query: 252 VLGVHYKRLMKNKNLLEISQKPFPTADSPYFSQ 285
           VLG HYKRLMKNK+LLE+SQK FPT  SPYF Q
Sbjct: 241 VLGTHYKRLMKNKHLLEVSQKSFPTTQSPYFPQ 271

BLAST of Clc03G19200 vs. NCBI nr
Match: XP_022158816.1 (uncharacterized protein LOC111025282 [Momordica charantia])

HSP 1 Score: 390.6 bits (1002), Expect = 1.2e-104
Identity = 198/287 (68.99%), Postives = 238/287 (82.93%), Query Frame = 0

Query: 1   MDKKREDS---GKKLYFTSENGECSSFSIVSGAEKLDEYSRTRTLPQGEKTIDVVIKLPA 60
           MDKK+E+S    KKLY TSENGE SSFSI+SGAE+LD +S+T TLPQG +TI+VV+KLPA
Sbjct: 1   MDKKKEESESDEKKLYITSENGESSSFSIISGAEQLDHFSQTGTLPQGRETIEVVLKLPA 60

Query: 61  VRLTSLLEAMELRKDTQISMKAPFTNLQNIFNGRSLIPLPTTDEEEQQEYNTESNERTVT 120
           +RL+SLL AMEL +DT+IS+ APF+NL  I  GRSLIPLP  + E+ Q  N+ SNERT+T
Sbjct: 61  LRLSSLLAAMELEEDTKISIPAPFSNLPKILTGRSLIPLPPNNGEQDQ--NSSSNERTIT 120

Query: 121 SGPSSSS--FDLPHPPSFIGAPALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQG 180
           SGPSSSS   +LPH  +   APALFLRIG+WQVV ++EGDLVL+FDY+ KKI WE+VR+G
Sbjct: 121 SGPSSSSSPSELPHISN--AAPALFLRIGSWQVVPQNEGDLVLRFDYRTKKISWEIVREG 180

Query: 181 PSRHKIEVDWSNIIGIEAAIEDHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTG 240
           PS+HKIE+DWSNIIGIEAA EDHRQGILQLELQ PPRFYKEIE+   K  KW +E+DFT 
Sbjct: 181 PSKHKIEIDWSNIIGIEAATEDHRQGILQLELQKPPRFYKEIEAKLQKQSKWIDESDFTD 240

Query: 241 GRASMNRKHFSVFPPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYF 283
           GRAS+NR++FSVF PGVLG HYKR+MKNK++LE+SQK FP   SPYF
Sbjct: 241 GRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEVSQKSFPATYSPYF 283

BLAST of Clc03G19200 vs. NCBI nr
Match: XP_016900954.1 (PREDICTED: uncharacterized protein LOC107991120 [Cucumis melo])

HSP 1 Score: 351.3 bits (900), Expect = 7.9e-93
Identity = 171/220 (77.73%), Postives = 193/220 (87.73%), Query Frame = 0

Query: 67  MELRKDTQISMKAPFTNLQNIFNGRSLIPLPTTDEEEQQ-EY-NTESNERTVTSGPSSSS 126
           M+LRKDT+I+MK PFTNLQ IFNGR+L+PLP  +EEEQQ EY NT+SN+RT+ SGPSSSS
Sbjct: 1   MDLRKDTEIAMKPPFTNLQKIFNGRTLVPLPQINEEEQQHEYTNTQSNQRTIFSGPSSSS 60

Query: 127 FDLPHPPSFIGAPALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPSRHKIEVD 186
           F  P    F  APALFLRIG+WQVVA +E DLVLKFDY+NKKI WEVVR+GPS+HKIE+D
Sbjct: 61  FAEPPNTPFNAAPALFLRIGSWQVVANNESDLVLKFDYRNKKISWEVVREGPSKHKIEID 120

Query: 187 WSNIIGIEAAIEDHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTGGRASMNRKH 246
           WSNIIGI+AAIEDHRQGILQLELQNPPRFYKEIE+ PLK FKWE E DFT GR SM+RKH
Sbjct: 121 WSNIIGIQAAIEDHRQGILQLELQNPPRFYKEIETRPLKLFKWEEEYDFTQGRVSMHRKH 180

Query: 247 FSVFPPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYFSQ 285
           FSVF PG+LG +YKRLMKNK+LLE+SQKPFPTADSPYF Q
Sbjct: 181 FSVFAPGILGTYYKRLMKNKDLLEVSQKPFPTADSPYFHQ 220

BLAST of Clc03G19200 vs. ExPASy TrEMBL
Match: A0A6J1HAI6 (uncharacterized protein LOC111462107 OS=Cucurbita moschata OX=3662 GN=LOC111462107 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 7.7e-110
Identity = 200/282 (70.92%), Postives = 236/282 (83.69%), Query Frame = 0

Query: 3   KKREDSGKKLYFTSENGECSSFSIVSGAEKLDEYSRTRTLPQGEKTIDVVIKLPAVRLTS 62
           KK E+S KK+YFTSENGE SSF I+SGA+KLD +S+T TLP+GE+TI+VV+KLPA+RL+S
Sbjct: 4   KKGEESEKKMYFTSENGESSSFPIISGADKLDHFSKTGTLPEGEETIEVVLKLPALRLSS 63

Query: 63  LLEAMELRKDTQISMKAPFTNLQNIFNGRSLIPLPTTDEEEQQEYNTESNERTVTSGPSS 122
           LL AMEL KDT+IS+  PFTNL +I  G SLIPLP T EE  Q+YN  S+ERT+TSGPSS
Sbjct: 64  LLAAMELEKDTKISLPPPFTNLPSILTGHSLIPLPPTSEE--QQYNNPSHERTITSGPSS 123

Query: 123 SSFDLPHPPSFIGAPALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPSRHKIE 182
           SS        F G  ALFLR+G+WQVV K++GDLVLKFDY+NKK+ WE+VR+GPS+HKIE
Sbjct: 124 SSSSELPQLVFNGVLALFLRVGSWQVVPKNDGDLVLKFDYRNKKVTWEIVREGPSKHKIE 183

Query: 183 VDWSNIIGIEAAIEDHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTGGRASMNR 242
           +DWSNIIGIEAAIEDHRQGILQLELQ PPRFYKEIES P K  KW +E+DFT GRAS+NR
Sbjct: 184 IDWSNIIGIEAAIEDHRQGILQLELQKPPRFYKEIESKPHKQPKWADESDFTDGRASLNR 243

Query: 243 KHFSVFPPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYFSQ 285
           ++F+VF PGVLG HYKRLMKNK+LLE+SQK FPT  SPYF Q
Sbjct: 244 RYFAVFSPGVLGTHYKRLMKNKHLLEVSQKSFPTTQSPYFPQ 283

BLAST of Clc03G19200 vs. ExPASy TrEMBL
Match: A0A6J1I0N3 (uncharacterized protein LOC111467912 OS=Cucurbita maxima OX=3661 GN=LOC111467912 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.8e-109
Identity = 199/282 (70.57%), Postives = 235/282 (83.33%), Query Frame = 0

Query: 3   KKREDSGKKLYFTSENGECSSFSIVSGAEKLDEYSRTRTLPQGEKTIDVVIKLPAVRLTS 62
           KK E+S KK+YFTSENGE SSF I+SGA+KLD +S+T  LP+GE+TI+VV+KLPA+RL+S
Sbjct: 4   KKGEESEKKMYFTSENGESSSFPIISGADKLDHFSKTGALPEGEETIEVVLKLPALRLSS 63

Query: 63  LLEAMELRKDTQISMKAPFTNLQNIFNGRSLIPLPTTDEEEQQEYNTESNERTVTSGPSS 122
           LL AMEL KDT+IS+  PFTNL +I  G SLIPLP T EE  Q+YN  S+ERT+TSGPSS
Sbjct: 64  LLAAMELEKDTKISLPPPFTNLPSILTGHSLIPLPPTSEE--QQYNNPSHERTITSGPSS 123

Query: 123 SSFDLPHPPSFIGAPALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPSRHKIE 182
           SS        F G  ALFLR+G+WQVV K++GDLVLKFDY+NKK+ WE+VR+GPS+HKIE
Sbjct: 124 SSSSELPQLVFNGILALFLRVGSWQVVPKNDGDLVLKFDYRNKKVTWEIVREGPSKHKIE 183

Query: 183 VDWSNIIGIEAAIEDHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTGGRASMNR 242
           +DWSNIIGIEAAIEDHRQGILQLELQ PPRFYKEIES P K  KW +E+DFT GRAS+NR
Sbjct: 184 IDWSNIIGIEAAIEDHRQGILQLELQKPPRFYKEIESKPHKQPKWADESDFTDGRASLNR 243

Query: 243 KHFSVFPPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYFSQ 285
           ++F+VF PGVLG HYKRLMKNK+LLE+SQK FPT  SPYF Q
Sbjct: 244 RYFAVFSPGVLGTHYKRLMKNKHLLEVSQKSFPTTQSPYFPQ 283

BLAST of Clc03G19200 vs. ExPASy TrEMBL
Match: A0A6J1E232 (uncharacterized protein LOC111025282 OS=Momordica charantia OX=3673 GN=LOC111025282 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 5.7e-105
Identity = 198/287 (68.99%), Postives = 238/287 (82.93%), Query Frame = 0

Query: 1   MDKKREDS---GKKLYFTSENGECSSFSIVSGAEKLDEYSRTRTLPQGEKTIDVVIKLPA 60
           MDKK+E+S    KKLY TSENGE SSFSI+SGAE+LD +S+T TLPQG +TI+VV+KLPA
Sbjct: 1   MDKKKEESESDEKKLYITSENGESSSFSIISGAEQLDHFSQTGTLPQGRETIEVVLKLPA 60

Query: 61  VRLTSLLEAMELRKDTQISMKAPFTNLQNIFNGRSLIPLPTTDEEEQQEYNTESNERTVT 120
           +RL+SLL AMEL +DT+IS+ APF+NL  I  GRSLIPLP  + E+ Q  N+ SNERT+T
Sbjct: 61  LRLSSLLAAMELEEDTKISIPAPFSNLPKILTGRSLIPLPPNNGEQDQ--NSSSNERTIT 120

Query: 121 SGPSSSS--FDLPHPPSFIGAPALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQG 180
           SGPSSSS   +LPH  +   APALFLRIG+WQVV ++EGDLVL+FDY+ KKI WE+VR+G
Sbjct: 121 SGPSSSSSPSELPHISN--AAPALFLRIGSWQVVPQNEGDLVLRFDYRTKKISWEIVREG 180

Query: 181 PSRHKIEVDWSNIIGIEAAIEDHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTG 240
           PS+HKIE+DWSNIIGIEAA EDHRQGILQLELQ PPRFYKEIE+   K  KW +E+DFT 
Sbjct: 181 PSKHKIEIDWSNIIGIEAATEDHRQGILQLELQKPPRFYKEIEAKLQKQSKWIDESDFTD 240

Query: 241 GRASMNRKHFSVFPPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYF 283
           GRAS+NR++FSVF PGVLG HYKR+MKNK++LE+SQK FP   SPYF
Sbjct: 241 GRASLNRRYFSVFSPGVLGAHYKRMMKNKHVLEVSQKSFPATYSPYF 283

BLAST of Clc03G19200 vs. ExPASy TrEMBL
Match: A0A1S4DY92 (uncharacterized protein LOC107991120 OS=Cucumis melo OX=3656 GN=LOC107991120 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.8e-93
Identity = 171/220 (77.73%), Postives = 193/220 (87.73%), Query Frame = 0

Query: 67  MELRKDTQISMKAPFTNLQNIFNGRSLIPLPTTDEEEQQ-EY-NTESNERTVTSGPSSSS 126
           M+LRKDT+I+MK PFTNLQ IFNGR+L+PLP  +EEEQQ EY NT+SN+RT+ SGPSSSS
Sbjct: 1   MDLRKDTEIAMKPPFTNLQKIFNGRTLVPLPQINEEEQQHEYTNTQSNQRTIFSGPSSSS 60

Query: 127 FDLPHPPSFIGAPALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPSRHKIEVD 186
           F  P    F  APALFLRIG+WQVVA +E DLVLKFDY+NKKI WEVVR+GPS+HKIE+D
Sbjct: 61  FAEPPNTPFNAAPALFLRIGSWQVVANNESDLVLKFDYRNKKISWEVVREGPSKHKIEID 120

Query: 187 WSNIIGIEAAIEDHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTGGRASMNRKH 246
           WSNIIGI+AAIEDHRQGILQLELQNPPRFYKEIE+ PLK FKWE E DFT GR SM+RKH
Sbjct: 121 WSNIIGIQAAIEDHRQGILQLELQNPPRFYKEIETRPLKLFKWEEEYDFTQGRVSMHRKH 180

Query: 247 FSVFPPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYFSQ 285
           FSVF PG+LG +YKRLMKNK+LLE+SQKPFPTADSPYF Q
Sbjct: 181 FSVFAPGILGTYYKRLMKNKDLLEVSQKPFPTADSPYFHQ 220

BLAST of Clc03G19200 vs. ExPASy TrEMBL
Match: A0A0A0M1F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561960 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.0e-90
Identity = 165/220 (75.00%), Postives = 188/220 (85.45%), Query Frame = 0

Query: 67  MELRKDTQISMKAPFTNLQNIFNGRSLIPLPTTDEEEQQE--YNTESNERTVTSGPSSSS 126
           M+LRKDT+I MK PFTNLQ IFNGR+L+PLP  +EEEQQ   +NT+SN+RT  SGPSSSS
Sbjct: 1   MDLRKDTEIPMKPPFTNLQRIFNGRTLVPLPQINEEEQQHEYHNTQSNQRTTFSGPSSSS 60

Query: 127 FDLPHPPSFIGAPALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPSRHKIEVD 186
           F  P    F  APALFLRIG+WQVVA  E DLVLKFDY+NKK+ WEVV +GPS+HKIE++
Sbjct: 61  FAEPPNTPFNAAPALFLRIGSWQVVANSESDLVLKFDYRNKKLSWEVVLEGPSKHKIEIE 120

Query: 187 WSNIIGIEAAIEDHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTGGRASMNRKH 246
           WSNIIGI+AAIEDHRQGILQLELQNPPRFYKEIE+ PLK FKWE E DFT GRASMNRKH
Sbjct: 121 WSNIIGIQAAIEDHRQGILQLELQNPPRFYKEIETRPLKLFKWEEEYDFTQGRASMNRKH 180

Query: 247 FSVFPPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYFSQ 285
           FSVF PG+LG +YKRLMKNK ++E+SQKPFPTA+SPYF Q
Sbjct: 181 FSVFAPGILGTYYKRLMKNKEMVEVSQKPFPTANSPYFHQ 220

BLAST of Clc03G19200 vs. TAIR 10
Match: AT2G24100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 124.0 bits (310), Expect = 1.9e-28
Identity = 57/147 (38.78%), Postives = 92/147 (62.59%), Query Frame = 0

Query: 137 PALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPSRHKIEVDWSNIIGIEAAIE 196
           PA  LRIG W+  +++EGDLV K  +   K+ WEV+ QG  + KIE+ WS+I+ ++A + 
Sbjct: 115 PATILRIGQWEYKSRYEGDLVAKCYFAKHKLVWEVLEQG-LKSKIEIQWSDIMALKANLP 174

Query: 197 DHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTGGRASMNRKHFSVFPPGVLGVH 256
           +   G L + L   P F++E    P KH  W+  +DFT G+ASMNR+HF   PPG++  H
Sbjct: 175 EDEPGTLTIVLARRPLFFRETNPQPRKHTLWQATSDFTDGQASMNRQHFLQCPPGIMNKH 234

Query: 257 YKRLMK-NKNLLEISQKPFPTADSPYF 283
           +++L++ +  L  +S++P     +P+F
Sbjct: 235 FEKLVQCDHRLFCLSRQPEINLAAPFF 260

BLAST of Clc03G19200 vs. TAIR 10
Match: AT4G30780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24100.1); Has 109 Blast hits to 109 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 4.3e-28
Identity = 58/147 (39.46%), Postives = 90/147 (61.22%), Query Frame = 0

Query: 137 PALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPSRHKIEVDWSNIIGIEAAIE 196
           PA  L+IG W+  +++EGDLV K  +   K+ WEV+ QG  + KIE+ WS+I+ ++A   
Sbjct: 142 PASLLKIGQWEYKSRYEGDLVAKCYFAKHKLVWEVLEQG-LKSKIEIQWSDIMALKANCP 201

Query: 197 DHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTGGRASMNRKHFSVFPPGVLGVH 256
           +   G L L L   P F++E    P KH  W+  +DFT G+ASMNR+HF     G++  H
Sbjct: 202 EDGPGTLTLVLARQPLFFRETNPQPRKHTLWQATSDFTDGQASMNRQHFLQCAQGIMNKH 261

Query: 257 YKRLMK-NKNLLEISQKPFPTADSPYF 283
           +++L++ +  L  +S++P    DSPYF
Sbjct: 262 FEKLVQCDHRLFHLSRQPEIAIDSPYF 287

BLAST of Clc03G19200 vs. TAIR 10
Match: AT1G54300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05770.1); Has 107 Blast hits to 107 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). )

HSP 1 Score: 105.5 bits (262), Expect = 7.0e-23
Identity = 56/154 (36.36%), Postives = 86/154 (55.84%), Query Frame = 0

Query: 137 PALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPS------RHKIEVDWSNIIG 196
           P   +RIG W VVAK+  D+V KF +  KK+ WE +   P       + KIE+ W+++  
Sbjct: 4   PISTIRIGGWVVVAKNPDDIVAKFYFAKKKLIWEFLFGEPETNTLRLKRKIEIQWNDVSS 63

Query: 197 IEAAIEDHRQ-GILQLELQNPPRFYKEIESGPLKHFKWEN-EADFTGGRASMNRKHFSVF 256
            E +I    + GIL++EL+  P F+ E      KH +W+  + DFTG  AS  R+H   F
Sbjct: 64  FEESISSRDETGILKIELKKRPTFFIETNPQAGKHTQWKQLDHDFTGDHASNYRRHTLHF 123

Query: 257 PPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYF 283
           PPGVL  + ++L+ +    ++ + PFP  +S YF
Sbjct: 124 PPGVLQKNLEKLVTDSFWSKLYEVPFPVHESRYF 157

BLAST of Clc03G19200 vs. TAIR 10
Match: AT3G05770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54300.1); Has 105 Blast hits to 105 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 100.5 bits (249), Expect = 2.3e-21
Identity = 59/173 (34.10%), Postives = 92/173 (53.18%), Query Frame = 0

Query: 121 SSSSFDLPHPPSFIGA---PALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWE------V 180
           SS +  LP  P  + A   P   ++IG    VAK+  D+V KF +  KK+ WE      V
Sbjct: 58  SSKTSTLPKSPEKLKAMNFPISTIKIGDCVFVAKNPDDIVAKFYFAKKKLLWEFLFGEPV 117

Query: 181 VRQGPSRHKIEVDWSNIIGIEAAIEDHRQ-GILQLELQNPPRFYKEIESGPLKHFKWEN- 240
                 + KIE+ W+++   E +I    + GIL++EL+  P F+ E      KH +W+  
Sbjct: 118 ANMPRLKSKIEIQWNDVSSFEESINSRDETGILKIELKKRPTFFTETNPQAGKHTQWKQL 177

Query: 241 EADFTGGRASMNRKHFSVFPPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYF 283
           + DFTG +AS  R+H   FPPGVL  + ++L+ +    ++ + PFP  +S YF
Sbjct: 178 DYDFTGDQASYYRRHTLHFPPGVLQKNLEKLLTDSFWSKLYKVPFPVHESLYF 230

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022961562.11.6e-10970.92uncharacterized protein LOC111462107 [Cucurbita moschata] >XP_023516882.1 unchar... [more]
XP_022968779.17.9e-10970.57uncharacterized protein LOC111467912 [Cucurbita maxima][more]
KAG7024019.19.6e-10771.06hypothetical protein SDJN02_15048, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022158816.11.2e-10468.99uncharacterized protein LOC111025282 [Momordica charantia][more]
XP_016900954.17.9e-9377.73PREDICTED: uncharacterized protein LOC107991120 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HAI67.7e-11070.92uncharacterized protein LOC111462107 OS=Cucurbita moschata OX=3662 GN=LOC1114621... [more]
A0A6J1I0N33.8e-10970.57uncharacterized protein LOC111467912 OS=Cucurbita maxima OX=3661 GN=LOC111467912... [more]
A0A6J1E2325.7e-10568.99uncharacterized protein LOC111025282 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A1S4DY923.8e-9377.73uncharacterized protein LOC107991120 OS=Cucumis melo OX=3656 GN=LOC107991120 PE=... [more]
A0A0A0M1F91.0e-9075.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561960 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G24100.11.9e-2838.78unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G30780.14.3e-2839.46unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G54300.17.0e-2336.36unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G05770.12.3e-2134.10unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..126
NoneNo IPR availablePANTHERPTHR33494OS02G0793800 PROTEINcoord: 136..284
NoneNo IPR availablePANTHERPTHR33494:SF5F10A16.6 PROTEINcoord: 136..284

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc03G19200.1Clc03G19200.1mRNA