Clc03G19200 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAATCAAATTGAAATGGATAAGAAAAGGGAAGATAGTGGGAAAAAACTATATTTTACTTCAGAAAATGGTGAATGTTCAAGTTTTTCTATAGTCTCTGGTGCAGAAAAGCTTGATGAATATTCAAGAACTCGAACCCTTCCTCAGGTCAATTCTTTTCAATTTTCATGGGATTTCTTTCCTTTTTTTAGTTTTTTTGTTTAATCTTGTTTTCCTTAATTTCTTATTGGATTTCTTTGGGATATCTGTTAAATTTTCTCATGGAAAAATGAGAAACCCTAAAGATATTGATAACAATTTAAAGTACTACTAAAGTTAATTCTTGTGTGCATGCATTGCTTTAATGTTTTCATGGATATGTGCTTGCTTTGTTTTGAGAGATCTTCATTCTCTTTCAATTTCACTGAAAATTGAAAAACCCTAGAAATTCATTTTTGGGATTGGGGCAAATTATTGCACAGAAAAATTTTGAAAATTAATTTTTACCCTTTTTTTTGACCTAATCTAGTGCATATTTGGATTGGCTTTTAAAGTGAGGAGAAGAGTGAAGTAATATATTTTTTTTTTCCGCTCACTTCTTCATTTTTTCATATCCATTTCGATATCTTTTTTTAGAAAGATCTTGGATTTGTTTTCATATCTCTTCTTTTACAGTAAATTGTAAACCCTAAAAATTAGTTTTTGAGATTGGAGATTCTTTTTCTTAGCAAGATATTAGATGATATATAAAAAGGATCAACAGGTACACTAGGCATCTCAACTAGGACTAGTTTGAAGAGATTGGGGCTAATATTAAGTTTTCATGTTGCACCCTTTAAAAGAGATTGGGGCTAATTAATTGACTGGAAAAATTTTGAAAATTAGTTATTTACTTTTATATATATTAATTAATTTTTAAGAATTGGCAAAATTAGATAGAGGAATTTTGAAAATTAGTTCTTTTAACTCATTTTTAAACCTAAACAATTGCATGTTTGGATTGACTTTCTAAGTGAAAAGAAGATTGAAGTAATATATACAATTTCTTCTCTTATTAGTTTTTCTTGTCCATGTCAATATCTGTTGTTCAAAAATCTTGGGTTTGTTTTAAGATCTCTTCTATCCCTTTGAATTTCACTGAAAATTGAAAACCCTAGAAATTAATTTTTGAGATTAGGGCAAATAATTATTAGATAGAAAATTTTTAAAAATTAATTATCTACTAGTTTTTTAACATATTAATGGCTTGTTTGGATTTGATTAAAAAAAATTCACTTAGAATGTTAATCCAACTAGGTTCTGAGATAGTTAAACTAGGGTTAAGTTCAATATCTTTAACTTGGCATTAAACAATTGTCCTTTGGGTTTTTTTTTTTTTTTTATTTTAAGCATCTATCTTAGGCTTTTCTTTTGATTTCTCTGAAAAAAAAAAAAGAAAAAAAAAAGAACTAGCCCTAGTGAGATAAGAGCCTCTATAGGGTAAATTTTTGGCCACTACCCATGAAGATTGAAAACCCCAAAAATTAATATTTGAGACGGGGGCAATTATTAGACAGAAATTTTTTGAAAATATTAATTCTTTACTCATTTTTAAAGCTGTTTAGATTTGCTTAAAGATACATTTCTTTAGTTGCACTTAAAAACACTTACTTAAGCACCTAGAAACCAATCCAAACAAATCTTAAGATAGTTAAACTAGGGTTAATATACAAACAAGAGAAGGTGGAATTGTTCGATAAATATGCAAATTTTAATCATAAACATTTAATGAAATCGAATTATTTAACACGGGTATTGTGTTTGTTTGTTTGTTTTCATTAGGGTGAAAAGACAATTGACGTAGTGATAAAACTTCCGGCAGTTCGTCTCACTTCTCTTCTCGAAGCAATGGAATTAAGAAAGGATACACAAATTTCGATGAAAGCTCCATTTACAAACCTCCAAAATATCTTCAATGGCCGTTCATTAATCCCTCTCCCTACCACAGATGAAGAAGAACAACAAGAATACAATACTGAATCAAATGAAAGAACAGTCACTTCTGGACCAAGCAGCTCTTCCTTTGACCTTCCCCATCCTCCCAGCTTTATTGGTGCTCCTGCCCTTTTCCTTCGTATCGGCACCTGGCAGGTATGATGACGTATTTCCGAGTGATTTTTTCTATCACTTTTGTCTGTTTAAAAGTATATCTTGGAAACCGTCACTCCATCCTATCTTGTTTTAATAATTTTAAGTCAATTTAGGGTTTGATTTTACACTTTTGGGTTTGGGGTATGATGACAGTGCTAAGGATGTATCAATGTAGTTGAGATATCTAGGGGCACCTCTTGATTCATCTTTATCCTCTAGTATCTTGCTCAAAAATTAATAAAGACATGTTTCATAGTGATATTGAATTTAACAAAATTGATTTTAACTATTTCAAAATCACTCCCAAACATGAAATAAATAAACAAGTCAAAAGAAATTGTGTTCTATATTAATTTCATTTCTCATTTTTCTTCTATTGGCAATTTGATTTTGCAGGTAGTGGCCAAACATGAAGGTGATTTGGTTTTGAAATTTGATTATAAAAACAAGAAGATATATTGGGAGGTTGTGAGGCAAGGGCCTTCCAGGCACAAGATTGAAGTTGATTGGTCTAATATCATAGGAATTGAAGCTGCCATTGAAGATCATAGACAAGGAATCCTCCAACTTGAGGTATTGAAATTTAGTTATTGCTTTTCTAAATTGTTGAGACTTTGGGTGTGATCGTGCCAACAGTAACGCATCGGATCTCATCAAAACTATACAATTAAGCATACTTGGGCGAGAGTAGTACTAAATTGCATGATCACTTGAGAAATCCTCGTGTTGCACACTTTTATAAAAAGTACAAATAATATAAAATAAATAAAATGAAAAACTTGCTGAGAGGGTTTGATGCTTGGAGATAACCCTTTTCAAAATGGGAATTTTGTGCTTATTTATAAAATTATGTTTACATAATCATCACACTTTGTTTGATGTTTTATCTTTCATGTATGAACTTAATTTTTAGAATATATGATCAGGTTAGTTGTTTTTTTAAAAAAAAGAAAAATTATTGAAAGTTTGATGCTTGAAACCCTTTCAAATTTAGATCATATCACTTTCTTTTAGGGTTTCTTTTTCTTGTACAAATGAGTTGTTCTGTTTTTGCATAGAAGAACTTTGTGCCCTTTGACTTATTGATCACCCATTATTTGGTCTTTTGTTATTATTTTAAAAACTTAAAGACCAAGATGTTTTTGAAGCCTTTTCAAAATGGAAAATCTTTGCCATTAAGAAAAAAAAATCAATGAAAATGTCTTAGATAACACTTTCTTTAGGGTTTTTTTTTTTTTTTTTTGTCATTTTTTAATGATTGGTTTATTTGTAGAACAAATTATGATGCTATTCTCTTCTATTCAAAATTAAGGGTTTGTAAATAGTAATTTTGTGCATAATAGTAATGTTAATTTTCCTTTTTTTTCATGGACAATTTTTTTTTTTTTGAGCAAATGATTTTATTCTTCTTTAAAAAAAAAGCAAGAAAAAAAAAAGGAAACAAAGAATTAAAATATAATAATGACTAGCAAACCTAGCTGATGTTGAGAAGTAATGGGAAAAATTCAATCAATAATCTGAAACTTTTTACAGATAAAATTTCAATAAAAAAAAAATATGTTCATATTCAATATAAATTGTTGTAATTTTCCCCCTTTTGAAGCTGCAAAACCCACCAAGATTCTACAAGGAGATTGAATCCGGACCACTGAAGCATTTCAAATGGGAAAATGAAGCAGATTTTACTGGAGGTAGAGCTTCTATGAACAGGTAATTAATTCAGCTCAAAAGGGACTCTTTTTATTCACATAATGATACCTTTAAATGTGATATCTCAACATTTAATTAATAATTCAATTGCTAACTATGTAATGGAATAGAAATTACCAAGTTGGAAATTTTGAAACTTACAAACAGTAAGTGAAAATGGATGTATACTGAATAACCCAAATGAAAGGTTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTCTTCATTTTGTTTGTTTAAAAACATGTGGGGTTAGGGTTTTCAAACTTTTGACTTATTGATCGAGTTAAATTATGTTGAAGTTGGTTAACGATTTTATATACTAATTTAAATGTTTATGAAACTTTTTTTCAGGAAACACTTTTCAGTGTTTCCACCAGGAGTACTTGGTGTACATTATAAGAGATTGATGAAGAACAAGAATTTGCTAGAAATAAGCCAAAAGCCATTTCCAACAGCTGATTCCCCTTATTTCTCCCAGCATTAG AAAAAAAATCAAATTGAAATGGATAAGAAAAGGGAAGATAGTGGGAAAAAACTATATTTTACTTCAGAAAATGGTGAATGTTCAAGTTTTTCTATAGTCTCTGGTGCAGAAAAGCTTGATGAATATTCAAGAACTCGAACCCTTCCTCAGGGTGAAAAGACAATTGACGTAGTGATAAAACTTCCGGCAGTTCGTCTCACTTCTCTTCTCGAAGCAATGGAATTAAGAAAGGATACACAAATTTCGATGAAAGCTCCATTTACAAACCTCCAAAATATCTTCAATGGCCGTTCATTAATCCCTCTCCCTACCACAGATGAAGAAGAACAACAAGAATACAATACTGAATCAAATGAAAGAACAGTCACTTCTGGACCAAGCAGCTCTTCCTTTGACCTTCCCCATCCTCCCAGCTTTATTGGTGCTCCTGCCCTTTTCCTTCGTATCGGCACCTGGCAGGTAGTGGCCAAACATGAAGGTGATTTGGTTTTGAAATTTGATTATAAAAACAAGAAGATATATTGGGAGGTTGTGAGGCAAGGGCCTTCCAGGCACAAGATTGAAGTTGATTGGTCTAATATCATAGGAATTGAAGCTGCCATTGAAGATCATAGACAAGGAATCCTCCAACTTGAGCTGCAAAACCCACCAAGATTCTACAAGGAGATTGAATCCGGACCACTGAAGCATTTCAAATGGGAAAATGAAGCAGATTTTACTGGAGGTAGAGCTTCTATGAACAGGAAACACTTTTCAGTGTTTCCACCAGGAGTACTTGGTGTACATTATAAGAGATTGATGAAGAACAAGAATTTGCTAGAAATAAGCCAAAAGCCATTTCCAACAGCTGATTCCCCTTATTTCTCCCAGCATTAG ATGGATAAGAAAAGGGAAGATAGTGGGAAAAAACTATATTTTACTTCAGAAAATGGTGAATGTTCAAGTTTTTCTATAGTCTCTGGTGCAGAAAAGCTTGATGAATATTCAAGAACTCGAACCCTTCCTCAGGGTGAAAAGACAATTGACGTAGTGATAAAACTTCCGGCAGTTCGTCTCACTTCTCTTCTCGAAGCAATGGAATTAAGAAAGGATACACAAATTTCGATGAAAGCTCCATTTACAAACCTCCAAAATATCTTCAATGGCCGTTCATTAATCCCTCTCCCTACCACAGATGAAGAAGAACAACAAGAATACAATACTGAATCAAATGAAAGAACAGTCACTTCTGGACCAAGCAGCTCTTCCTTTGACCTTCCCCATCCTCCCAGCTTTATTGGTGCTCCTGCCCTTTTCCTTCGTATCGGCACCTGGCAGGTAGTGGCCAAACATGAAGGTGATTTGGTTTTGAAATTTGATTATAAAAACAAGAAGATATATTGGGAGGTTGTGAGGCAAGGGCCTTCCAGGCACAAGATTGAAGTTGATTGGTCTAATATCATAGGAATTGAAGCTGCCATTGAAGATCATAGACAAGGAATCCTCCAACTTGAGCTGCAAAACCCACCAAGATTCTACAAGGAGATTGAATCCGGACCACTGAAGCATTTCAAATGGGAAAATGAAGCAGATTTTACTGGAGGTAGAGCTTCTATGAACAGGAAACACTTTTCAGTGTTTCCACCAGGAGTACTTGGTGTACATTATAAGAGATTGATGAAGAACAAGAATTTGCTAGAAATAAGCCAAAAGCCATTTCCAACAGCTGATTCCCCTTATTTCTCCCAGCATTAG MDKKREDSGKKLYFTSENGECSSFSIVSGAEKLDEYSRTRTLPQGEKTIDVVIKLPAVRLTSLLEAMELRKDTQISMKAPFTNLQNIFNGRSLIPLPTTDEEEQQEYNTESNERTVTSGPSSSSFDLPHPPSFIGAPALFLRIGTWQVVAKHEGDLVLKFDYKNKKIYWEVVRQGPSRHKIEVDWSNIIGIEAAIEDHRQGILQLELQNPPRFYKEIESGPLKHFKWENEADFTGGRASMNRKHFSVFPPGVLGVHYKRLMKNKNLLEISQKPFPTADSPYFSQH Homology
BLAST of Clc03G19200 vs. NCBI nr
Match: XP_022961562.1 (uncharacterized protein LOC111462107 [Cucurbita moschata] >XP_023516882.1 uncharacterized protein LOC111780650 [Cucurbita pepo subsp. pepo] >KAG6590487.1 hypothetical protein SDJN03_15910, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 406.8 bits (1044), Expect = 1.6e-109 Identity = 200/282 (70.92%), Postives = 236/282 (83.69%), Query Frame = 0
BLAST of Clc03G19200 vs. NCBI nr
Match: XP_022968779.1 (uncharacterized protein LOC111467912 [Cucurbita maxima]) HSP 1 Score: 404.4 bits (1038), Expect = 7.9e-109 Identity = 199/282 (70.57%), Postives = 235/282 (83.33%), Query Frame = 0
BLAST of Clc03G19200 vs. NCBI nr
Match: KAG7024019.1 (hypothetical protein SDJN02_15048, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 397.5 bits (1020), Expect = 9.6e-107 Identity = 194/273 (71.06%), Postives = 229/273 (83.88%), Query Frame = 0
BLAST of Clc03G19200 vs. NCBI nr
Match: XP_022158816.1 (uncharacterized protein LOC111025282 [Momordica charantia]) HSP 1 Score: 390.6 bits (1002), Expect = 1.2e-104 Identity = 198/287 (68.99%), Postives = 238/287 (82.93%), Query Frame = 0
BLAST of Clc03G19200 vs. NCBI nr
Match: XP_016900954.1 (PREDICTED: uncharacterized protein LOC107991120 [Cucumis melo]) HSP 1 Score: 351.3 bits (900), Expect = 7.9e-93 Identity = 171/220 (77.73%), Postives = 193/220 (87.73%), Query Frame = 0
BLAST of Clc03G19200 vs. ExPASy TrEMBL
Match: A0A6J1HAI6 (uncharacterized protein LOC111462107 OS=Cucurbita moschata OX=3662 GN=LOC111462107 PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 7.7e-110 Identity = 200/282 (70.92%), Postives = 236/282 (83.69%), Query Frame = 0
BLAST of Clc03G19200 vs. ExPASy TrEMBL
Match: A0A6J1I0N3 (uncharacterized protein LOC111467912 OS=Cucurbita maxima OX=3661 GN=LOC111467912 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 3.8e-109 Identity = 199/282 (70.57%), Postives = 235/282 (83.33%), Query Frame = 0
BLAST of Clc03G19200 vs. ExPASy TrEMBL
Match: A0A6J1E232 (uncharacterized protein LOC111025282 OS=Momordica charantia OX=3673 GN=LOC111025282 PE=4 SV=1) HSP 1 Score: 390.6 bits (1002), Expect = 5.7e-105 Identity = 198/287 (68.99%), Postives = 238/287 (82.93%), Query Frame = 0
BLAST of Clc03G19200 vs. ExPASy TrEMBL
Match: A0A1S4DY92 (uncharacterized protein LOC107991120 OS=Cucumis melo OX=3656 GN=LOC107991120 PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 3.8e-93 Identity = 171/220 (77.73%), Postives = 193/220 (87.73%), Query Frame = 0
BLAST of Clc03G19200 vs. ExPASy TrEMBL
Match: A0A0A0M1F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561960 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 1.0e-90 Identity = 165/220 (75.00%), Postives = 188/220 (85.45%), Query Frame = 0
BLAST of Clc03G19200 vs. TAIR 10
Match: AT2G24100.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 124.0 bits (310), Expect = 1.9e-28 Identity = 57/147 (38.78%), Postives = 92/147 (62.59%), Query Frame = 0
BLAST of Clc03G19200 vs. TAIR 10
Match: AT4G30780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24100.1); Has 109 Blast hits to 109 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). ) HSP 1 Score: 122.9 bits (307), Expect = 4.3e-28 Identity = 58/147 (39.46%), Postives = 90/147 (61.22%), Query Frame = 0
BLAST of Clc03G19200 vs. TAIR 10
Match: AT1G54300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05770.1); Has 107 Blast hits to 107 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). ) HSP 1 Score: 105.5 bits (262), Expect = 7.0e-23 Identity = 56/154 (36.36%), Postives = 86/154 (55.84%), Query Frame = 0
BLAST of Clc03G19200 vs. TAIR 10
Match: AT3G05770.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54300.1); Has 105 Blast hits to 105 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 100.5 bits (249), Expect = 2.3e-21 Identity = 59/173 (34.10%), Postives = 92/173 (53.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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