Clc03G18975 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTTGGAGATCATTACCCACGATCAATGGTCGTTTCCCTTCTCTTGGAGTCAAAATGCTTTTGTTGAAATCACTCGATGTCCAGGGTGTTTCTTCATGTCGTCGTTTGCTAGAATCGAACTCTCCATGGAGGATGAAGAACTCGACTTGGGCAGACGACAAAGGACCGGTCGAGATGATAGTGTTGGAGTTGGAGGCATCACAGAGTTCAACTTTCAATGGCTTACCATTTTCAGATTTTATCTCATTGTTGGTGAAAATGATGGAAGCAATTGGATTGGAGAAACGTAATTTGAACTTCGATAATGTTCTAGATGGTGTAGGTACTTCGTCTTTTCCACTCTCATGTAGTTTGCTGTTTATTTTTTTAATTTGGACAAGGAACAAATGTATATGTGAGAAGCACAAACAAACAATTGAAAACATATTCATGAAGCACAATACAAAAGTTAAAGAAATCAACAATCATAGATGAATACAACAACAAAGAAGTCTCATATAACAAAATTCAAGACATTCTAACAACAAAGAATAGCTAAAGTCCAATTAGAGGCTACAATGTAAGCATGTCGATATCAAGCTCGAATTAATACGCAACAGTTTTTGTTCTAAATCTCACAAAGTTTAGAAGATAAGAAACATGTTCTCTTACAAAACTCAATAATAACACATCATAGGAAAAAATGGTTAAATCAACTATGATTGACCAAAAAGTTTAATCTAATGGGTGGATGAATTTAGTATTACATCAACACACTAAAACTCTTCCTCACTTATAGACTTGAAATATACGAAAGACCAACCAAATAGAAATCAATATTATTTGGGGAGAAATAACAGCTCAGAGAGGTTTTGAATATAGAACCTCTTGCGAACATACCATGTTAAAATATGATTAGACATTAAATTGATTAGTCATCGAGAAGCAAATGACTCAATAGACTCTTTCAATCTGTTCCATGCTGACAAAGCTTTACTCACCATTCAAGACCCAGATCAAGCTCGTCTTCTTTGTTTAAACAAGGGTTACCGTTGAAAATTTCATTCATGGACAAGCTAAAGTTATTCCGAGTTATGGAGGTTGACTTCGTTTTAGAGAAATACCCCAACATGCCTGGAATCTCAATACATTCAAACAAATTGGCGATGCCTGTGGTGGATTCGTCGAAGTGGGAAAAGACTCTTGGCTAAAGCTCGATCTAACCGAAGCTAAAATACGAATAAGGGACAATTACTGCGGTTTTGTACCAGCAACCATTCGAATCAAAGACGAAGCCGATTGCGAATGTACTATTGCAACTGTAACTCTGGCAAACAGGAAATGGATCACCAATCTCATCCTTATTGCTAAATGAAATTGCCTATACCTTCCCCAGTAATTAGTCAACATTTGTGTTTGGAAAACAAATCACCGATCTCATCCTTGTTGCTAATGAAATTGTTGATTTTTGGAGATGTAGCAAAACAACGGGTTACATATTCAAGCTTGATGTTGAGAAGGCATTTGATAAAGTGAATTGGGACTTTCTTCTTACGATGCTTCACCTCAAAGGCTTTCATGAGTACTGGATTAATTGGATATATAAAAGCTTGCATTTCATTGGTAAGTTATTCGATTCTTTTGAATGGTAAACCCTGCGGGTATAAACAAGCCACTAGAGGAATTTGTCAAGGAGATCCTTTATCGCCATTTCTCTTCATAATCGCCATGGATTACCTCTTGATGCCCAACAGAAAAATCTCATTCAGGGGTTCACTACCAATAACAATAGTTTGCACATATCACATCTATTATTTGCGGATGATATCATACTTTTCTTTGTGGTTGATATTGTTAAGATCAGAAACCTCCTTTTCATTATCAAAGCTTTTGAACAAGCTTCTGGTCTGAAAATTAATTTGACAAAATCCTCCTTTGTTAGAATCAATATAGACCAAATGGACTCGAGCATTGTTGAATCTATGTGGGGTTATCCTCATACTACACTTCCCATCTCTTACCTTGGCATGCCACTCGGAGGTAATCCTAAGAGCATGGATTTTTGGAACCCCATCATTGAGAGAATTGAAAGCAAATTTGTATCATGGAGATATTCCTATACATCTAAGGGTGGTAGACTAACTCTAGTGCAAGCGGTGTTGAGCAACTTACCTACATATCGTCTCTCTACTTTTAAGGCTCCTATCAAGGTATGTAGGGAGATTGAGAAACAGATGCGTAACTTCTTATGGGAAGGTGTTGATAAAAGTGGTGGATCTCATCTTGTCCGTTGGGATATAGTTACAATGCCCAAGGAGAAAGGAGGTCTTGAGATCGACAGAATCCACTCCACAAATGGTTCTCTCCTTAGTAAGTGGATATGGAAATATTTCATGGAAACTAATATGATCCATCCCCTGGCTTAGTCCCACGCAATGTAAGTATAGAAGTGCAAGATTACGAGCTTGGTTCAACATCTCAAAGTACTGTGATGAATTTATTAATCAGATTGAGTGGAAACTATCTAATGGTGAAGATACACTGTTTTGGTATCATAAATGGACTGCGAATGGTATCCTGAAAGACCAATTTCCTTGCCTTTTTACTTTGTCCAGCCAAAAGATGCTTAAGGTGAAAGATGCATGGTCTCCCAACAATAATATATGGGACTTCCACCCTTAAAGACCTCTCTTATTGCGAGAAGTTGAACGTTGGACCAATATTTCTATTAGTTGGCCCATTCCTAATCCCATGGCTGGTAAGGATTCGATAATATGGACATTAAATCCAAATGGTGTATACACAGTGAAATCTAAGAAACACCAATGCTCCAACAATATTTGTAATGACAACACTAGTATTATTGTCGGTAATCTTTGGTCGACTACCATGCCCAAGAAGTGCAAGTTTTTTTGTATGGACCATGTTGCACAAAAGTCTCAATACTATGGAGAAGTGCCAAAAACGATTTCCCTCACTTAATTTGAATCCCAATTGGTTTGTCTTGTTTAAAAAACAAGGGGAAACAATAGAACACATCTTCCTTCATTGCAATTACACACCTCATGTATGGTCCTCTCTTGTGCATGCTACAGCAGATTTACCCAATTCTATTGGCGATATTGTCCAATTGCTCATCAATAGCCATTTACAGGCATCCATAAATATTCTCAAAAGCAATCTTATCGCCGCGTGCTTATGGAGTCTTTGGTTGGAGAGAAATAATAGAACATTCTCGGATAGGAGTCGCTCTACATGGCAACAGAAGGAAGATATTATTCACTTGGCTGCTACATGGTGTTCCAAATCACTTTTTATTTTTTAA ATGAAGTTGGAGATCATTACCCACGATCAATGGTCGTTTCCCTTCTCTTGGAGTCAAAATGCTTTTGTTGAAATCACTCGATGTCCAGGGTGTTTCTTCATGTCGTCGTTTGCTAGAATCGAACTCTCCATGGAGGATGAAGAACTCGACTTGGGCAGACGACAAAGGACCGGTCGAGATGATAGTGTTGGAGTTGGAGGCATCACAGAGTTCAACTTTCAATGGCTTACCATTTTCAGATTTTATCTCATTGTTGGTGAAAATGATGGAAGCAATTGGATTGGAGAAACAGAAATACCCCAACATGCCTGGAATCTCAATACATTCAAACAAATTGGCGATGCCTGTGGTGGATTCGTCGAAGTGGGAAAAGACTCTTGGCTAAAGCTCGATCTAACCGAAGCTAAAATACGAATAAGGGACAATTACTGCGGTTTTGTACCAGCAACCATTCGAATCAAAGACGAAGCCGATTGCGAATGTACTATTGCAACTGCATCCATAAATATTCTCAAAAGCAATCTTATCGCCGCGTGCTTATGGAGTCTTTGGTTGGAGAGAAATAATAGAACATTCTCGGATAGGAGTCGCTCTACATGGCAACAGAAGGAAGATATTATTCACTTGGCTGCTACATGGTGTTCCAAATCACTTTTTATTTTTTAA ATGAAGTTGGAGATCATTACCCACGATCAATGGTCGTTTCCCTTCTCTTGGAGTCAAAATGCTTTTGTTGAAATCACTCGATGTCCAGGGTGTTTCTTCATGTCGTCGTTTGCTAGAATCGAACTCTCCATGGAGGATGAAGAACTCGACTTGGGCAGACGACAAAGGACCGGTCGAGATGATAGTGTTGGAGTTGGAGGCATCACAGAGTTCAACTTTCAATGGCTTACCATTTTCAGATTTTATCTCATTGTTGGTGAAAATGATGGAAGCAATTGGATTGGAGAAACAGAAATACCCCAACATGCCTGGAATCTCAATACATTCAAACAAATTGGCGATGCCTGTGGTGGATTCGTCGAAGTGGGAAAAGACTCTTGGCTAAAGCTCGATCTAACCGAAGCTAAAATACGAATAAGGGACAATTACTGCGGTTTTGTACCAGCAACCATTCGAATCAAAGACGAAGCCGATTGCGAATGTACTATTGCAACTGCATCCATAAATATTCTCAAAAGCAATCTTATCGCCGCGTGCTTATGGAGTCTTTGGTTGGAGAGAAATAATAGAACATTCTCGGATAGGAGTCGCTCTACATGGCAACAGAAGGAAGATATTATTCACTTGGCTGCTACATGGTGTTCCAAATCACTTTTTATTTTTTAA MKLEIITHDQWSFPFSWSQNAFVEITRCPGCFFMSSFARIELSMEDEELDLGRRQRTGRDDSVGVGGITEFNFQWLTIFRFYLIVGENDGSNWIGETEIPQHAWNLNTFKQIGDACGGFVEVGKDSWLKLDLTEAKIRIRDNYCGFVPATIRIKDEADCECTIATASINILKSNLIAACLWSLWLERNNRTFSDRSRSTWQQKEDIIHLAATWCSKSLFIF Homology
BLAST of Clc03G18975 vs. NCBI nr
Match: KAA0039967.1 (hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa]) HSP 1 Score: 92.4 bits (228), Expect = 5.1e-15 Identity = 60/165 (36.36%), Postives = 82/165 (49.70%), Query Frame = 0
BLAST of Clc03G18975 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 6.7e-15 Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 0
BLAST of Clc03G18975 vs. NCBI nr
Match: TYK10355.1 (hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 6.7e-15 Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 0
BLAST of Clc03G18975 vs. NCBI nr
Match: KAA0044333.1 (hypothetical protein E6C27_scaffold46G00570 [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 6.7e-15 Identity = 58/166 (34.94%), Postives = 83/166 (50.00%), Query Frame = 0
BLAST of Clc03G18975 vs. NCBI nr
Match: ADN33672.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 90.5 bits (223), Expect = 2.0e-14 Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 0
BLAST of Clc03G18975 vs. ExPASy TrEMBL
Match: A0A5A7TEK8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002490 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 2.5e-15 Identity = 60/165 (36.36%), Postives = 82/165 (49.70%), Query Frame = 0
BLAST of Clc03G18975 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.2e-15 Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 0
BLAST of Clc03G18975 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.2e-15 Identity = 57/166 (34.34%), Postives = 82/166 (49.40%), Query Frame = 0
BLAST of Clc03G18975 vs. ExPASy TrEMBL
Match: A0A5A7TLE2 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00570 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.2e-15 Identity = 58/166 (34.94%), Postives = 83/166 (50.00%), Query Frame = 0
BLAST of Clc03G18975 vs. ExPASy TrEMBL
Match: A0A5D3DLP0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00770 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 9.5e-15 Identity = 59/165 (35.76%), Postives = 81/165 (49.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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