Clc03G18410 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G18410
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	nuclear transcription factor Y subunit C-9
Location	ClcChr03: 30774580 .. 30777920 (+)
RNA-Seq Expression	Clc03G18410
Synteny	Clc03G18410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTCGGAATCGAAGACATAGACAGACTCTCTGCTATTCCTCTTTGTTTCCTTTCTTTTTAAAAGGTCAGTTTCTCACGAAAAACATTAATCTTTTCGAAATGAAACTCTATAGAATCTCTCTGATTTTCTCTTCTTTTCTTTCATTTAAGCGGACACAACCCCCAGAACAAAAGAAAAAGAAAAAAAAAAAAAAAAAGAAAATATGAAACTTTCTCCTTTCAAACCCCAACTAACATAACAAAAAAGCTAAATTATGACATGGGTCATCCTCCATTCTTCGCCATAGATCTCTCTCTCATCAATTTTCCCTTTTTCCCTTTCAGGGTCTTTAAGATCTTGTTCACTTGAGTATCATCTGTCTCTGAAAAAGGTAATTTAACTCTCTCTTTCTCTGCTTGATCCTTAATAATTGTGTGATTTTCTTTCTGGGTTTGTTTGTTTTTTTTGTTATATGATTTGGTTGGTTGTGGAAATTAATGATTGTTCTTTATATTACTGTATGGTTTCTCTAATTGTCGGATGATGATCTTCATTTGCAATCAACAAAGCTAAAATCTATGGGAAGATTGGTTCTCTCTAACTGCTCGTTGGGTTTTTACTTTCATTTGTTTAAGACTTTTAGCTATGAACATGAATTAGCCTACGTTACATTTGGGTATGAGTTTAATATCAAATCCCTTCCCTCACATAATTCTGTATCTTCTCTACCTGTTTGATGAATTGCATCTGAGGGAAATGAACATTAAAGCAGAGGGGGTTTCTATAAGCTTCTTGGTTGTTTGTAGGATTTGTTTTGTTAGCCCATTTAATCACGATGCATTATGTGACCAACGGGAATTGGGGCTTGGATGTAATATAGGTCAGGAAGCACATAGATATAGATTCTTGAACATGTGGACTTCTGTGGTTGCAGCTTTGAGAATTTTCTGTAATGGCTTGAAATTTGTCAGTAGATGTATGCAAGTACTGTGCTGTGAATTTTGTGCATGAAAAAGTCTTTTGATATATTCTGATCTTTCATTAAAAAAAAAAAAAATTAGATATTTTGTTTCCTCCTGAGATCTATTGATTTTGTTGAAATTTTACTTTGATCAATGATCACTCTCTAAATGTGGATTGAGTTTGTTTTAGACAATCCAGTTTGCGGATAAGTATTGCTCAATCATTTTGACGGGTTGAGTTGTTAATAATTAGGTGAAAAAGTGAATATATATTATGGTCTCCTTGTAAAGGTTCTGTATGATGGATTTCAATTACGTTTTGTAGAATGTACTGTTTTTCTTCAGTTCTTTTTCCTAGTTAAAAAGTTATTCTTGTTTCCGTTTTTAAACCCACTTCAAGTTGCATCCTGATTATATGTACTATTTATCTGTTTCGTGTACATAGTTTGATTATTCCATTTGTTGTTCTTCTTTTCAAAAGCTGTTGGAGATTTACTTCAAAGTTCAACTGTGATGGATCAGCAAGGGCATGGCCAGCCTCCATCCATGGGAGCAGTTGGCAGTGGAGGTCAGATAGCATATGGTAGCAACCTGTACCATCCCAACCAAATGACTGTAGGCCCGACTTCCGGATCTGTCGTTACATCAGTCGGAGGTATTCAGTCTACAAGTCAACCTGGTGGAGCTCAGCTTGCTCAACATCAACTTGCTTATCAACATATCCACCAGCAGCAGCAACAGCAGCTTCAGCAGCAGCTCCAGACTTTTTGGGTAAATCAATACCAAGAGATTGAGAAGGTAACAGACTTCAAGAACCATAGTCTTCCGTTAGCAAGAATCAAGAAGATCATGAAGGCTGACGAGGACGTACGAATGATATCAGCTGAGGCACCTGTTTTATTTGCTAGGGCATGTGAAATGTTCATCCTGGAATTGACTTTACGGTCTTGGAATCATACTGAAGAGAACAAGCGCAGGACACTTCAAAAGAATGATATTGCTGCAGCTATCACAAGAACTGACATTTTCGACTTTCTGGTTGATATAGTGCCGAGGGAGGATCTGAAAGACGAAGTACTCACATCGATTCCAAGAGGATCAATGACAGTTGGGGGGCCTGGAGATGCACTTCCTTACTGCTATATGCCGTCTCAGCATGCACCTCAAGTTGGGGCACCTGGAATGATCATGGGTAAGCCTGTGATGGACCCAGCTATGTATGCTCCACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGCACAAGATCAAACCCCTCCTGATCAATAGTAGCTTGCAGCATGGAGCTGAAGGCGAACCGTACGTCTCTCTTTGTTCTTTTTGTGACATCTCTTTTATTCAAAATGGAAGTTCTGTGGTGGTATATATATAATGCCTTTTTTGGTCTACTATCTTCAAGTAGATTTCATGTTTTTTGAGCTTGTGTTTGTGTTCAGAATTCAGATCCATTCCAGTCTGAAGTGATGCATATTTTGTTGAAAACGTTGGCTGTAAAGTGCATATGAGTGTATTATCATCAATCATATATGCAGCTTACAATTTCCCTTTGAGTTGAAGCTTTAAATAAACTCTAATTCTGTGTTCCCTTTAATGTGATTATATTTAGATGTCGATAATGGGGTTAGGTTTGTATATCAAAATTCGAGTCTCGAGTATATGTTTGGTGCGTGTATTTAGTTGTATAGACTGGAGTTGACAGTTTGTGTATATATTTGGTTTTTGTATTTGCATATGTTAGACTACGAATTAATCTGTAGATACTATAAACTGCATAAGCCCAGACTTCTGAGAAAACCCCTTTTAAGCTACAAGCTAACTTTTGTAATCACAAACCCACAAATGAACGTCGAACCACGAATTATATAAGCTTGCTACTGCAAAAAAAGACTCATTCCTTGCCACACTTCACACTGGACTATCCGAACTTTGGCCTTTCAACTCTTGGCTTCAAAAATTCAAACTTTTTGAACTCGTGAACCGAACACCTTCATAAATGGCCTCATAGTTGGATTTTAGATTTCCATTTGGCCTATACTCACCATTTTCCTGTCAATTGTTGCAGACGGAGTCTCCTCCGAAGCAAGCTCACAATGATGCCACCACACACACACGACAGACCGACAGGAGAATTTACACTGAAGATTTGATCTGAAGCCCTACATAATACTTTCTGTAGATATTTTGCTTGACAAGATTTGATAATCTTGATTGAGCTAGAAAAAGTCTCTTCTTTTTCTATTCATGCTTTACTTCTATTCTGCATATTGGAAATGACAGTTGAAAAGAATGTATAACTTCATGTGATACTCCCAAAAATTTGATGCTTACCTTCACATTCCCATATAAAAGAAACTGTAGTTTCCTTATTCTG

mRNA sequence

AAGTCGGAATCGAAGACATAGACAGACTCTCTGCTATTCCTCTTTGTTTCCTTTCTTTTTAAAAGGGTCTTTAAGATCTTGTTCACTTGAGTATCATCTGTCTCTGAAAAAGACTTTTAGCTATGAACATGAATTAGCCTACGTTACATTTGGGATTTGTTTTGTTAGCCCATTTAATCACGATGCATTATGTGACCAACGGGAATTGGGGCTTGGATGTAATATAGGTCAGGAAGCACATAGATATAGATTCTTGAACATGTGGACTTCTGTGGTTGCAGCTTTGAGAATTTTCTGTAATGGCTTGAAATTTGTCAGTAGATCTGTTGGAGATTTACTTCAAAGTTCAACTGTGATGGATCAGCAAGGGCATGGCCAGCCTCCATCCATGGGAGCAGTTGGCAGTGGAGGTCAGATAGCATATGGTAGCAACCTGTACCATCCCAACCAAATGACTGTAGGCCCGACTTCCGGATCTGTCGTTACATCAGTCGGAGGTATTCAGTCTACAAGTCAACCTGGTGGAGCTCAGCTTGCTCAACATCAACTTGCTTATCAACATATCCACCAGCAGCAGCAACAGCAGCTTCAGCAGCAGCTCCAGACTTTTTGGGTAAATCAATACCAAGAGATTGAGAAGGTAACAGACTTCAAGAACCATAGTCTTCCGTTAGCAAGAATCAAGAAGATCATGAAGGCTGACGAGGACGTACGAATGATATCAGCTGAGGCACCTGTTTTATTTGCTAGGGCATGTGAAATGTTCATCCTGGAATTGACTTTACGGTCTTGGAATCATACTGAAGAGAACAAGCGCAGGACACTTCAAAAGAATGATATTGCTGCAGCTATCACAAGAACTGACATTTTCGACTTTCTGGTTGATATAGTGCCGAGGGAGGATCTGAAAGACGAAGTACTCACATCGATTCCAAGAGGATCAATGACAGTTGGGGGGCCTGGAGATGCACTTCCTTACTGCTATATGCCGTCTCAGCATGCACCTCAAGTTGGGGCACCTGGAATGATCATGGGTAAGCCTGTGATGGACCCAGCTATGTATGCTCCACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGCACAAGATCAAACCCCTCCTGATCAATAGTAGCTTGCAGCATGGAGCTGAAGGCGAACCACGGAGTCTCCTCCGAAGCAAGCTCACAATGATGCCACCACACACACACGACAGACCGACAGGAGAATTTACACTGAAGATTTGATCTGAAGCCCTACATAATACTTTCTGTAGATATTTTGCTTGACAAGATTTGATAATCTTGATTGAGCTAGAAAAAGTCTCTTCTTTTTCTATTCATGCTTTACTTCTATTCTGCATATTGGAAATGACAGTTGAAAAGAATGTATAACTTCATGTGATACTCCCAAAAATTTGATGCTTACCTTCACATTCCCATATAAAAGAAACTGTAGTTTCCTTATTCTG

Coding sequence (CDS)

ATGTGGACTTCTGTGGTTGCAGCTTTGAGAATTTTCTGTAATGGCTTGAAATTTGTCAGTAGATCTGTTGGAGATTTACTTCAAAGTTCAACTGTGATGGATCAGCAAGGGCATGGCCAGCCTCCATCCATGGGAGCAGTTGGCAGTGGAGGTCAGATAGCATATGGTAGCAACCTGTACCATCCCAACCAAATGACTGTAGGCCCGACTTCCGGATCTGTCGTTACATCAGTCGGAGGTATTCAGTCTACAAGTCAACCTGGTGGAGCTCAGCTTGCTCAACATCAACTTGCTTATCAACATATCCACCAGCAGCAGCAACAGCAGCTTCAGCAGCAGCTCCAGACTTTTTGGGTAAATCAATACCAAGAGATTGAGAAGGTAACAGACTTCAAGAACCATAGTCTTCCGTTAGCAAGAATCAAGAAGATCATGAAGGCTGACGAGGACGTACGAATGATATCAGCTGAGGCACCTGTTTTATTTGCTAGGGCATGTGAAATGTTCATCCTGGAATTGACTTTACGGTCTTGGAATCATACTGAAGAGAACAAGCGCAGGACACTTCAAAAGAATGATATTGCTGCAGCTATCACAAGAACTGACATTTTCGACTTTCTGGTTGATATAGTGCCGAGGGAGGATCTGAAAGACGAAGTACTCACATCGATTCCAAGAGGATCAATGACAGTTGGGGGGCCTGGAGATGCACTTCCTTACTGCTATATGCCGTCTCAGCATGCACCTCAAGTTGGGGCACCTGGAATGATCATGGGTAAGCCTGTGATGGACCCAGCTATGTATGCTCCACAATCACACCCTTACATGCCTCCACAAATGTGGCAGCACGCACAAGATCAAACCCCTCCTGATCAATAG

Protein sequence

MWTSVVAALRIFCNGLKFVSRSVGDLLQSSTVMDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMPPQMWQHAQDQTPPDQ

Homology

[Close]

BLAST of Clc03G18410 vs. NCBI nr
Match: XP_038879069.1 (nuclear transcription factor Y subunit C-9 [Benincasa hispida] >XP_038879070.1 nuclear transcription factor Y subunit C-9 [Benincasa hispida] >XP_038879071.1 nuclear transcription factor Y subunit C-9 [Benincasa hispida] >XP_038879072.1 nuclear transcription factor Y subunit C-9 [Benincasa hispida] >XP_038879073.1 nuclear transcription factor Y subunit C-9 [Benincasa hispida])

HSP 1 Score: 507.7 bits (1306), Expect = 6.8e-140
Identity = 255/260 (98.08%), Postives = 258/260 (99.23%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQGHGQPPSMGAVGSGGQ+AYGSNLYHP+QMTVGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 93  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 152
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 153 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 212
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 213 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 272
           REDLKDEVLTSIPRGSMTVGGPG+ALPYCYMPSQHAPQVGAPGMIMGKPVMDP MYAPQS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGEALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAPQS 240

Query: 273 HPYMPPQMWQHAQDQTPPDQ 293
           HPYMPPQMWQHAQDQ PPDQ
Sbjct: 241 HPYMPPQMWQHAQDQAPPDQ 260

[Close]

BLAST of Clc03G18410 vs. NCBI nr
Match: XP_031735973.1 (nuclear transcription factor Y subunit C-9 [Cucumis sativus] >XP_031735974.1 nuclear transcription factor Y subunit C-9 [Cucumis sativus] >XP_031735975.1 nuclear transcription factor Y subunit C-9 [Cucumis sativus] >KGN66090.1 hypothetical protein Csa_007021 [Cucumis sativus])

HSP 1 Score: 499.6 bits (1285), Expect = 1.8e-137
Identity = 255/260 (98.08%), Postives = 256/260 (98.46%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQM+VGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 93  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 152
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 153 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 212
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 213 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 272
           REDLKDEVLTSIPRGSMTVGGPGD LPY YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240

Query: 273 HPYMPPQMWQHAQDQTPPDQ 293
           HPYM PQMWQHAQDQ PPDQ
Sbjct: 241 HPYMAPQMWQHAQDQAPPDQ 259

[Close]

BLAST of Clc03G18410 vs. NCBI nr
Match: XP_022157074.1 (nuclear transcription factor Y subunit C-9 [Momordica charantia] >XP_022157080.1 nuclear transcription factor Y subunit C-9 [Momordica charantia])

HSP 1 Score: 498.0 bits (1281), Expect = 5.4e-137
Identity = 250/260 (96.15%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQGHGQPPSMGAVGSGGQ+AYGSNLYHP+QMTVGPTSGSVVTSVGGIQSTSQP GAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQL 60

Query: 93  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 152
           AQHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 153 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 212
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 213 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 272
           REDLKDEVLTSIPRG++TVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDP MYA QS
Sbjct: 181 REDLKDEVLTSIPRGTITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQS 240

Query: 273 HPYMPPQMWQHAQDQTPPDQ 293
           HPYMPPQMWQHAQDQ PP+Q
Sbjct: 241 HPYMPPQMWQHAQDQAPPEQ 260

[Close]

BLAST of Clc03G18410 vs. NCBI nr
Match: XP_022933523.1 (nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_022933524.1 nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_022969894.1 nuclear transcription factor Y subunit C-9-like [Cucurbita maxima] >XP_022969901.1 nuclear transcription factor Y subunit C-9-like [Cucurbita maxima] >XP_022969911.1 nuclear transcription factor Y subunit C-9-like [Cucurbita maxima] >XP_023530278.1 nuclear transcription factor Y subunit C-9 [Cucurbita pepo subsp. pepo] >XP_023530279.1 nuclear transcription factor Y subunit C-9 [Cucurbita pepo subsp. pepo] >XP_023530280.1 nuclear transcription factor Y subunit C-9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493.0 bits (1268), Expect = 1.7e-135
Identity = 249/260 (95.77%), Postives = 252/260 (96.92%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQGHGQP SMGAVGSGGQIAYGSNLYHP Q+TVG TSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 93  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 152
            QHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  GQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 153 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 212
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 213 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 272
           REDLKDEVLTSIPRGS+TVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPA+YA QS
Sbjct: 181 REDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQS 240

Query: 273 HPYMPPQMWQHAQDQTPPDQ 293
           HPYMPPQMWQH QDQ PPDQ
Sbjct: 241 HPYMPPQMWQHTQDQAPPDQ 260

[Close]

BLAST of Clc03G18410 vs. NCBI nr
Match: XP_008450660.1 (PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis melo] >XP_016900989.1 PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis melo] >KAA0050877.1 nuclear transcription factor Y subunit C-9 [Cucumis melo var. makuwa] >TYK10229.1 nuclear transcription factor Y subunit C-9 [Cucumis melo var. makuwa])

HSP 1 Score: 491.5 bits (1264), Expect = 5.0e-135
Identity = 254/260 (97.69%), Postives = 254/260 (97.69%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQGHGQ PSMGAVGSGGQIAYGSNLYHPNQM VGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQ-PSMGAVGSGGQIAYGSNLYHPNQMPVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 93  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 152
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 153 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 212
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 213 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 272
           REDLKDEVLTSIPRGSMTVGGPGD LPY YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240

Query: 273 HPYMPPQMWQHAQDQTPPDQ 293
           HPYM PQMWQHAQDQ PPDQ
Sbjct: 241 HPYMAPQMWQHAQDQAPPDQ 258

[Close]

BLAST of Clc03G18410 vs. ExPASy Swiss-Prot
Match: Q8L4B2 (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NFYC9 PE=1 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.0e-70
Identity = 167/262 (63.74%), Postives = 184/262 (70.23%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQ HGQ          G + YG+N Y  N     P S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQTN-----PMSTTAATVAGG---AAQPG---- 60

Query: 93  AQHQLAYQHIH-QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 152
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 153 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 212
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 213 PREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQ 272
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P      Y P 
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAYPP- 229

Query: 273 SHPYMPPQMW-QHAQDQTPPDQ 293
            +PYM   MW Q A DQ  PDQ
Sbjct: 241 -NPYMGQPMWQQQAPDQ--PDQ 229

[Close]

BLAST of Clc03G18410 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 8.8e-66
Identity = 150/249 (60.24%), Postives = 165/249 (66.27%), Query Frame = 0


Query: 44  MGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIH 103
           M   G    + YGSN Y  N MT  PT                           AY  IH
Sbjct: 1   MDQQGQSSAMNYGSNPYQTNAMTTTPTGSD----------------------HPAYHQIH 60

Query: 104 QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFA 163
           QQQQQQL QQLQ+FW  Q++EIEK TDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA
Sbjct: 61  QQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFA 120

Query: 164 RACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTS 223
           RACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL  
Sbjct: 121 RACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGG 180

Query: 224 IPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMPPQMWQH 283
           +   + T  G     PY Y+P   AP +G PGM+MG    +P  Y P  +PYM   MWQ 
Sbjct: 181 VGAEAATAAG----YPYGYLPPGTAP-IGNPGMVMG----NPGAYPP--NPYMGQPMWQQ 216

Query: 284 -AQDQTPPD 292
              +Q  PD
Sbjct: 241 PGPEQQDPD 216

[Close]

BLAST of Clc03G18410 vs. ExPASy Swiss-Prot
Match: Q655V5 (Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-53
Identity = 137/257 (53.31%), Postives = 163/257 (63.42%), Query Frame = 0


Query: 42  PSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQ--LAQHQLAY 101
           P++G V  G Q+      Y P      PT+ +V+ + G   + S P       AQHQL Y
Sbjct: 9   PAIGVVAGGSQV---YPAYRP--AATVPTAPAVIPA-GSQPAPSFPANPDQLSAQHQLVY 68

Query: 102 ---QHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISA 161
              Q  HQQ QQQ Q+QLQ FW  +  +IE+ TDFKNHSLPLARIKKIMKADEDVRMISA
Sbjct: 69  QQAQQFHQQLQQQQQRQLQQFWAERLVDIEQTTDFKNHSLPLARIKKIMKADEDVRMISA 128

Query: 162 EAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDL 221
           EAPV+FA+ACE+FILELTLRSW HTEENKRRTLQKNDIAAAITRTD++DFLVDIVPR+DL
Sbjct: 129 EAPVIFAKACEIFILELTLRSWMHTEENKRRTLQKNDIAAAITRTDMYDFLVDIVPRDDL 188

Query: 222 KDEVLTSIPRGSMTVGGPGDALPY-CYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPY 281
           K+E +     G   +G P D+ PY  Y+P Q  P  G             A    Q HP 
Sbjct: 189 KEEGVGLPRAGLPPLGVPADSYPYGYYVPQQQVPGAGI------------AYGGQQGHPG 247

Query: 282 MPPQMWQHAQDQTPPDQ 293
              Q  Q  Q++ P +Q
Sbjct: 249 YLWQDPQEQQEEPPAEQ 247

[Close]

BLAST of Clc03G18410 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 5.0e-53
Identity = 124/220 (56.36%), Postives = 145/220 (65.91%), Query Frame = 0


Query: 63  NQMTVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQQLQTFWVNQY 122
           N     P++  +     G   ++  GGA       +Y H+ QQQ    QQQLQ FW  Q 
Sbjct: 4   NNQQPPPSAAGIPPPPPGTTISAAGGGA-------SYHHLLQQQ----QQQLQLFWTYQR 63

Query: 123 QEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILELTLRSWNHTE 182
           QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILELT+RSW H E
Sbjct: 64  QEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE 123

Query: 183 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTSIPRGSMTVGGPGDALPYCY 242
           ENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+++KDE   ++  G M V      +PY Y
Sbjct: 124 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE--AAVLGGGMVVAPTASGVPYYY 183

Query: 243 MPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMPPQMWQ 283
            P       G  GM++G+P MDP     Q     P Q WQ
Sbjct: 184 PPM--GQPAGPGGMMIGRPAMDPNGVYVQP----PSQAWQ 204

[Close]

BLAST of Clc03G18410 vs. ExPASy Swiss-Prot
Match: Q9FMV5 (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.5e-52
Identity = 129/231 (55.84%), Postives = 147/231 (63.64%), Query Frame = 0


Query: 57  SNLYHPNQMTVGPTSGSVVTSV----GGIQSTSQPGGAQLAQHQLAYQHIHQQQQQQLQQ 116
           +N   P   +V P   +V T +     G  S    GGA        Y H+ QQQQQQLQ 
Sbjct: 7   NNNQQPPPTSVYPPGSAVTTVIPPPPSGSASIVTGGGA-------TYHHLLQQQQQQLQM 66

Query: 117 QLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFARACEMFILE 176
               FW  Q QEIE+V DFKNH LPLARIKKIMKADEDVRMISAEAP+LFA+ACE+FILE
Sbjct: 67  ----FWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILE 126

Query: 177 LTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEV-LTSIPRGSMTV 236
           LT+RSW H EENKRRTLQKNDIAAAITRTDIFDFLVDIVPRE++K+E    S   G   V
Sbjct: 127 LTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMV 186

Query: 237 GGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMPPQMWQ 283
                 +PY Y P       G  GM++G+P MDP+    Q     P Q WQ
Sbjct: 187 APAASGVPYYYPPMGQPAVPG--GMMIGRPAMDPSGVYAQP----PSQAWQ 220

[Close]

BLAST of Clc03G18410 vs. ExPASy TrEMBL
Match: A0A0A0LW22 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G570150 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 8.9e-138
Identity = 255/260 (98.08%), Postives = 256/260 (98.46%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQM+VGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMSVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 93  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 152
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 153 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 212
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 213 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 272
           REDLKDEVLTSIPRGSMTVGGPGD LPY YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240

Query: 273 HPYMPPQMWQHAQDQTPPDQ 293
           HPYM PQMWQHAQDQ PPDQ
Sbjct: 241 HPYMAPQMWQHAQDQAPPDQ 259

[Close]

BLAST of Clc03G18410 vs. ExPASy TrEMBL
Match: A0A6J1DS47 (nuclear transcription factor Y subunit C-9 OS=Momordica charantia OX=3673 GN=LOC111023881 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.6e-137
Identity = 250/260 (96.15%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQGHGQPPSMGAVGSGGQ+AYGSNLYHP+QMTVGPTSGSVVTSVGGIQSTSQP GAQL
Sbjct: 1   MDQQGHGQPPSMGAVGSGGQMAYGSNLYHPSQMTVGPTSGSVVTSVGGIQSTSQPSGAQL 60

Query: 93  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 152
           AQHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 153 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 212
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 213 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 272
           REDLKDEVLTSIPRG++TVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDP MYA QS
Sbjct: 181 REDLKDEVLTSIPRGTITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPTMYAQQS 240

Query: 273 HPYMPPQMWQHAQDQTPPDQ 293
           HPYMPPQMWQHAQDQ PP+Q
Sbjct: 241 HPYMPPQMWQHAQDQAPPEQ 260

[Close]

BLAST of Clc03G18410 vs. ExPASy TrEMBL
Match: A0A6J1HZ39 (nuclear transcription factor Y subunit C-9-like OS=Cucurbita maxima OX=3661 GN=LOC111468953 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 8.4e-136
Identity = 249/260 (95.77%), Postives = 252/260 (96.92%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQGHGQP SMGAVGSGGQIAYGSNLYHP Q+TVG TSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 93  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 152
            QHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  GQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 153 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 212
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 213 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 272
           REDLKDEVLTSIPRGS+TVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPA+YA QS
Sbjct: 181 REDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQS 240

Query: 273 HPYMPPQMWQHAQDQTPPDQ 293
           HPYMPPQMWQH QDQ PPDQ
Sbjct: 241 HPYMPPQMWQHTQDQAPPDQ 260

[Close]

BLAST of Clc03G18410 vs. ExPASy TrEMBL
Match: A0A6J1F001 (nuclear transcription factor Y subunit C-9-like OS=Cucurbita moschata OX=3662 GN=LOC111440924 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 8.4e-136
Identity = 249/260 (95.77%), Postives = 252/260 (96.92%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQGHGQP SMGAVGSGGQIAYGSNLYHP Q+TVG TSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQPQSMGAVGSGGQIAYGSNLYHPGQITVGSTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 93  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 152
            QHQLAYQHIHQQQQQQLQQQLQTFW NQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  GQHQLAYQHIHQQQQQQLQQQLQTFWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 153 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 212
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 213 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 272
           REDLKDEVLTSIPRGS+TVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPA+YA QS
Sbjct: 181 REDLKDEVLTSIPRGSITVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAIYAQQS 240

Query: 273 HPYMPPQMWQHAQDQTPPDQ 293
           HPYMPPQMWQH QDQ PPDQ
Sbjct: 241 HPYMPPQMWQHTQDQAPPDQ 260

[Close]

BLAST of Clc03G18410 vs. ExPASy TrEMBL
Match: A0A1S3BQR3 (nuclear transcription factor Y subunit C-9 OS=Cucumis melo OX=3656 GN=LOC103492182 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.4e-135
Identity = 254/260 (97.69%), Postives = 254/260 (97.69%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQGHGQ PSMGAVGSGGQIAYGSNLYHPNQM VGPTSGSVVTSVGGIQSTSQPGGAQL
Sbjct: 1   MDQQGHGQ-PSMGAVGSGGQIAYGSNLYHPNQMPVGPTSGSVVTSVGGIQSTSQPGGAQL 60

Query: 93  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 152
           AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR
Sbjct: 61  AQHQLAYQHIHQQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVR 120

Query: 153 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 212
           MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP
Sbjct: 121 MISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVP 180

Query: 213 REDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 272
           REDLKDEVLTSIPRGSMTVGGPGD LPY YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS
Sbjct: 181 REDLKDEVLTSIPRGSMTVGGPGDTLPY-YMPSQHAPQVGAPGMIMGKPVMDPAMYAPQS 240

Query: 273 HPYMPPQMWQHAQDQTPPDQ 293
           HPYM PQMWQHAQDQ PPDQ
Sbjct: 241 HPYMAPQMWQHAQDQAPPDQ 258

[Close]

BLAST of Clc03G18410 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 267.3 bits (682), Expect = 1.4e-71
Identity = 167/262 (63.74%), Postives = 184/262 (70.23%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQ HGQ          G + YG+N Y  N     P S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQTN-----PMSTTAATVAGG---AAQPG---- 60

Query: 93  AQHQLAYQHIH-QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 152
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 153 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 212
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 213 PREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQ 272
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P      Y P 
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAYPP- 229

Query: 273 SHPYMPPQMW-QHAQDQTPPDQ 293
            +PYM   MW Q A DQ  PDQ
Sbjct: 241 -NPYMGQPMWQQQAPDQ--PDQ 229

[Close]

BLAST of Clc03G18410 vs. TAIR 10
Match: AT1G08970.1 (nuclear factor Y, subunit C9 )

HSP 1 Score: 267.3 bits (682), Expect = 1.4e-71
Identity = 167/262 (63.74%), Postives = 184/262 (70.23%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQ HGQ          G + YG+N Y  N     P S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQTN-----PMSTTAATVAGG---AAQPG---- 60

Query: 93  AQHQLAYQHIH-QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 152
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 153 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 212
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 213 PREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQ 272
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P      Y P 
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAYPP- 229

Query: 273 SHPYMPPQMW-QHAQDQTPPDQ 293
            +PYM   MW Q A DQ  PDQ
Sbjct: 241 -NPYMGQPMWQQQAPDQ--PDQ 229

[Close]

BLAST of Clc03G18410 vs. TAIR 10
Match: AT1G08970.3 (nuclear factor Y, subunit C9 )

HSP 1 Score: 267.3 bits (682), Expect = 1.4e-71
Identity = 167/262 (63.74%), Postives = 184/262 (70.23%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQ HGQ          G + YG+N Y  N     P S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQTN-----PMSTTAATVAGG---AAQPG---- 60

Query: 93  AQHQLAYQHIH-QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 152
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 153 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 212
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 213 PREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQ 272
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P      Y P 
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAYPP- 229

Query: 273 SHPYMPPQMW-QHAQDQTPPDQ 293
            +PYM   MW Q A DQ  PDQ
Sbjct: 241 -NPYMGQPMWQQQAPDQ--PDQ 229

[Close]

BLAST of Clc03G18410 vs. TAIR 10
Match: AT1G08970.2 (nuclear factor Y, subunit C9 )

HSP 1 Score: 267.3 bits (682), Expect = 1.4e-71
Identity = 167/262 (63.74%), Postives = 184/262 (70.23%), Query Frame = 0


Query: 33  MDQQGHGQPPSMGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQL 92
           MDQQ HGQ          G + YG+N Y  N     P S +  T  GG    +QPG    
Sbjct: 1   MDQQDHGQ---------SGAMNYGTNPYQTN-----PMSTTAATVAGG---AAQPG---- 60

Query: 93  AQHQLAYQHIH-QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDV 152
              QLA+  IH QQQQQQL QQLQ FW NQ++EIEK TDFKNHSLPLARIKKIMKADEDV
Sbjct: 61  ---QLAFHQIHQQQQQQQLAQQLQAFWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDV 120

Query: 153 RMISAEAPVLFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIV 212
           RMISAEAPV+FARACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIV
Sbjct: 121 RMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIV 180

Query: 213 PREDLKDEVLTSIPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQ 272
           PREDL+DEVL SIPRG++         PY Y+P+  AP +G PGM+MG P      Y P 
Sbjct: 181 PREDLRDEVLGSIPRGTVPEAAAA-GYPYGYLPAGTAP-IGNPGMVMGNP---GGAYPP- 229

Query: 273 SHPYMPPQMW-QHAQDQTPPDQ 293
            +PYM   MW Q A DQ  PDQ
Sbjct: 241 -NPYMGQPMWQQQAPDQ--PDQ 229

[Close]

BLAST of Clc03G18410 vs. TAIR 10
Match: AT1G54830.2 (nuclear factor Y, subunit C3 )

HSP 1 Score: 251.9 bits (642), Expect = 6.2e-67
Identity = 150/249 (60.24%), Postives = 165/249 (66.27%), Query Frame = 0


Query: 44  MGAVGSGGQIAYGSNLYHPNQMTVGPTSGSVVTSVGGIQSTSQPGGAQLAQHQLAYQHIH 103
           M   G    + YGSN Y  N MT  PT                           AY  IH
Sbjct: 1   MDQQGQSSAMNYGSNPYQTNAMTTTPTGSD----------------------HPAYHQIH 60

Query: 104 QQQQQQLQQQLQTFWVNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVLFA 163
           QQQQQQL QQLQ+FW  Q++EIEK TDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA
Sbjct: 61  QQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFA 120

Query: 164 RACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLTS 223
           RACEMFILELTLRSWNHTEENKRRTLQKNDIAAA+TRTDIFDFLVDIVPREDL+DEVL  
Sbjct: 121 RACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGG 180

Query: 224 IPRGSMTVGGPGDALPYCYMPSQHAPQVGAPGMIMGKPVMDPAMYAPQSHPYMPPQMWQH 283
           +   + T  G     PY Y+P   AP +G PGM+MG    +P  Y P  +PYM   MWQ 
Sbjct: 181 VGAEAATAAG----YPYGYLPPGTAP-IGNPGMVMG----NPGAYPP--NPYMGQPMWQQ 216

Query: 284 -AQDQTPPD 292
              +Q  PD
Sbjct: 241 PGPEQQDPD 216

The following BLAST results are available for this feature:

BLAST of Clc03G18410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879069.1	6.8e-140	98.08	nuclear transcription factor Y subunit C-9 [Benincasa hispida] >XP_038879070.1 n...	[more]
XP_031735973.1	1.8e-137	98.08	nuclear transcription factor Y subunit C-9 [Cucumis sativus] >XP_031735974.1 nuc...	[more]
XP_022157074.1	5.4e-137	96.15	nuclear transcription factor Y subunit C-9 [Momordica charantia] >XP_022157080.1...	[more]
XP_022933523.1	1.7e-135	95.77	nuclear transcription factor Y subunit C-9-like [Cucurbita moschata] >XP_0229335...	[more]
XP_008450660.1	5.0e-135	97.69	PREDICTED: nuclear transcription factor Y subunit C-9 [Cucumis melo] >XP_0169009...	[more]

BLAST of Clc03G18410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4B2	2.0e-70	63.74	Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9ZVL3	8.8e-66	60.24	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q655V5	1.3e-53	53.31	Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9SMP0	5.0e-53	56.36	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FMV5	2.5e-52	55.84	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of Clc03G18410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW22	8.9e-138	98.08	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G5701...	[more]
A0A6J1DS47	2.6e-137	96.15	nuclear transcription factor Y subunit C-9 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1HZ39	8.4e-136	95.77	nuclear transcription factor Y subunit C-9-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1F001	8.4e-136	95.77	nuclear transcription factor Y subunit C-9-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3BQR3	2.4e-135	97.69	nuclear transcription factor Y subunit C-9 OS=Cucumis melo OX=3656 GN=LOC1034921...	[more]

BLAST of Clc03G18410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08970.4	1.4e-71	63.74	nuclear factor Y, subunit C9	[more]
AT1G08970.1	1.4e-71	63.74	nuclear factor Y, subunit C9	[more]
AT1G08970.3	1.4e-71	63.74	nuclear factor Y, subunit C9	[more]
AT1G08970.2	1.4e-71	63.74	nuclear factor Y, subunit C9	[more]
AT1G54830.2	6.2e-67	60.24	nuclear factor Y, subunit C3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 135..198 e-value: 3.4E-18 score: 65.7
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 97..213 e-value: 6.6E-48 score: 163.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 101..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..292
None	No IPR available	PANTHER	PTHR10252:SF117	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9	coord: 33..290
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 33..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G18410.2	Clc03G18410.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0006465	signal peptide processing
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005787	signal peptidase complex
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0005092	GDP-dissociation inhibitor activity
molecular_function	GO:0046982	protein heterodimerization activity