Clc03G18250 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATAAGTAAAGTAGTAAAATAGCAATGTTTTTAAAAACCAAATCCTCACAGCCTCTGGCATCTGCAATGTTCATAGTTGCTTAAGATACATTCACAATTCAATTTCACGCAACCTAAATCCACAAATTCTCGTTTTGCATTTCTCAGTTCATAATTGAATCGCAAAACCCAGAAAATTTGGATCCCAATCCGGAAACCGATGCGACCGAAGATCGAGACCGAGCAGAATCACAGCCATCGGAAGCCAATCTCCATCCTCCCAAAGCGCATAATCTTGGTCCGCCACGGTGAATCTCAGGGCAATCTCAACTCTGCGACCTACACCACAACCCCTGATTACAAAGTCCCATTAACTGAAGTGGGTTTGATTCAGGCTCGAACCGCAGGTATCGAGCTCCATAGATTGTTGTCCAATGACGGAACGAACCCTCATTGGCGAGTCTACTTCTATGTTTCGCCCTACGAGCGCACCCGATCCACACTCCGTGAGATCGGCCGCGCGTTCTCGAAGAAGAGGATTATTGGGGTTAGAGAGGAGTGTAGAATCAGAGAGCAGGACTTTGGGAATTTTCAAGTGGAGGAGAGGATGAAGGTTGTGAAGGAGACGAGGGAGAGATTTGGAAGATTCTTCTATCGGTTCCCTGAGGGAGAGTCCGCTGCCGATGTTTACGATCGCGTTTCCAGTGAGTTCTCTGTTTTTTTGCTTTTCATTCTACGTTTCTGATTTGCAATGGAGGATTTGGGTTTGATTCTTATGGATTGTTAATTGAAGATTGAGCTCTGTTTGTTGGTCTCTGATGTCTCTGGTGTAAGGAATTTTGTGATTTAGGATGTCTTACAGGTTGTATTATGTTTATTTGACATAGCATTCTTATATTAGTTATATGCGCTGTTTGAGAAATGGTGTAATGGATTAAGCTTGTGTAGAAGCTGACCTGTATTTGTTATGTGAGTTAGCTTATTTTGGACTACAGTTTTTGTTAATCCCCATTATCTACGTAAAGATAGATCCAGGCTTATAGAACTCACATTTTGAGCTTTATGCTAATCTCTAACCATCATAAAAAGCATATTTTGTGCCTAAATGGTATAAACTTTAACTTTCCAGCTCCAGACTTCATAAAATTTGATTTAAAATCGAGCCAAATATTTCACAAAATCTCATATATGGGAGCGTTTTCTCTTTACAGGGATTTTGATGATATTGATGAAACTTTCCAGTTTCAGGAGTATGATAATTTTGGGTCAGGTCATGTGTAGATGTGTAATTTCCTGATTATGGGGTTGATATTATCTTAGCAAAGATAGATTCTGGAATTCCTGAAAATGAATAGTGAAGAGTGAAGATTACTGGTAGCCAAAGGGCAATATTAGGTTTTGTGTCCCTACCGTTTTATCTTGGATTTTGTTGCCATTTGAAGAAAAAGGTGTGGAACACTAGCTTTTTGTCTGTTTTCAACGTTTTTCATATTTTAACTCAAAAGACAACTACAATTAGTTATAAAGAAATATATGAAGACAAGAAGATGGAGGCTGAGGACATTATGATATGGATTTAGAAAATATAATATATAAAAGGTATCTTCGATATTGGAGAATTGGGATTTTCTATTCAAGTTGAAAGCTTTTCTTTCAAATGTGCCATTGAAAGTTCATTCTAATAACGTCATATTATACTAGAAAAGTAGATACATTAGCAGCTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGTTGCTTTCCGTTCGAAAGAGAAAGCATTATTAAAAGTGGCGAATCATAATGTGGTTGACCCCTTTATAATTGTTACCTGCCATGTTTAATAATTTCTCTAATTAAAATGGTATACGATTGAATACCACTTATTAGTTTAGAAGTCTTCTTTATGATTGAGGGATTGACATGCATTAACTTCTTATCATGTAACTAAACTGTTGTTGCTTCTCAACATTGTAAACTTCGTTTGTTTCAGTAGCTTGTTTAGGCTCAAGAAGTGTTCCAACTGTTTATGTACATGAGATGAATGGTGGCATACCGAAATAACTATTTTGAGGAACATAATGATTTTTTCAGGCTTTCTCGAGTCCCTATGGAGGGACATAGACATGAACAGGCTCCGCCACAACCCTTCCCAAGATCTCAACCTTATAATCATATCTCATGGGCTAACGTCTCGTGTCTTCCTCACAAAATGGTTCAAATGGACAGTTGAGCAATTTGAGTACCTGAACAATCCCGAAAACTGCGAATACCGAGTGATGCAGTTGGGTGAAGGTGGGGAATACAGCTTAGCCATTCATCACACAGAGGAAGAAATGCTGGAATGGGGGCTTTCTCCTGAGATGATATCTGACCAGAAATGGAGAGCACGTGCCAACAAAGGTCAATGGAATGAAAGATGTCCCTGGTATCTTGATGCTTTCTTTCATAACCTAGCTGACTCGGACGGCGAAGATAGCTGTGATGAACCGTGTCAGGATCACAATGAATTAGTTGAATCTTGTTCAAGTGTAGTGCTCACAGAGGAATGACAATTACACTTTACATTCTTTGAATTTGATAGGTTGATTGTTCTCTCTGCTTAAAGTGTTCTTGGTTTTGCACAGTATTATTTGGGGTTTTCAGGAAAATATTAATTCTTTCCTAAATTGTTTAAGATACAGGGATCTGATCTGATGGGTTGAAAGCGCAACACACGATCGGACCGCCTTAAAAGAAATTAGTGAAGGTGATCAGCATAGGTATAGCTCATGGTTTGTTAATTGAAATGTGCATTATGAGGTTCATTTAATTTCTATAAGATAGAGCCATTATGTAGTTCTATATTCAAATTAAAAGGACCGCCAAACCCTTGATGAATGGTGAGAGATATATTGGTTATTTCCACTATTTCTTAAAAGGGTGAGAATTGATTAGTGGTGGAAAAGGATGGGTAGGGTTTAAGCAACCATCTGAAAATAGTGTTTCTTTTTTTCTTCACAAGTTACAAATAAATGAATAATTAAACAAAAACTTACTTTTAGCATAAGGGTTGGGATTTATGTCCTAAATTTGGTAGTTGGTAAATTTGGAAATAAATTAATATTTATTTATATAATAATTGTTATTTATTTGCATAACTCAAAATCAGGTTATTTAATGTATCTTGAACAAATACGTGGTTGATATATCCTATACAGTGAGTTTGTATAAGGTCGGACCATGGAATTAAATCTCTTAACTCCGTTAATTGAAGAGTTTTATATTTCAAATGAAACATGTAACTTGATTTCAATACTAAGTGAGTTAAGAACTCCTATTCATAAGGATTGTTTTTTTTATTTGTATGGGTGTGAGTGATTCCAATTTCGGGACTTGAACAATAAGGTCTCACTCTCTTATTGTTCATTAGAGGATCAGTGTCAAGGGTAAAATGGTAATTTGGTCGAAATATGGTTATTCAATGGTATTAATTAATGAGTTTAATTTATTAATCTCAAATCATTGGAGTTGATCCATTAGGTCCCTCTAGCTAACTTTAACAAGTAAATAAAGTGATAAAAGAATTTGAGTGTTCAAATTAATCAAGGGAATTAATTGCATATGATACAATTAACATTATGTATGAGATACATCATAGAATTTATAATGTGAGAAAATAAACTTTATAATACGAGAATATTAATATTTAAATAGGATTCAAATATTAAATTAGTATGAATTGAATTCATATTAAAACCATAGGTTATGAGAGTATATATGTATTATGACACATTAAATCGAATATATGATATTCGATTTCCTTAGTTAATTAAATAAGATTTTGTTAATTAAATGGTTATTTAATTAATATTTAATTATTATATAAATTAATTAAATTTGATATATTAATTTATATTAATTAAATATATTATTATTATTAAATAACGAATAATTCCCCTACAATGCAGGTGAGTGGGGAGGGAAGTTCAACTTCCCTCACGTTGAATAGAGATAAGATCTCTATTGTGAAAGCTATGTGAAATTCATAGAGATTTTTCTCATCCTCACTTGTTGCTCTTAAGAAGCATTTCTCCACTCTTTCCCTCTTTTCTATCACAAAAGGTTACCACAAACCTCCTTGTCCCAAGCAGGGAAGATTAATTGGTGATGTTCTTGCAGAAACGAGAGATTATTACCTTTTGAAGATAAGATCAACAAAGATATTTAGCTTCCTTTCCTTGAATCTTGTGGTGTGATTCAAAGCATATGTATTTATTTTTGTCTTGTACAAATTCATAAAACAATGTTGGGGCAAAGTGATTAAACGCTTCTGCCAAGAGGATTCAAATCCTTTCATAAACTTGTCAGGATAATGCTTCACAAGTTAAAAAATAAATGCATAATTAAAGCAC TATAAGTAAAGTAGTAAAATAGCAATGTTTTTAAAAACCAAATCCTCACAGCCTCTGGCATCTGCAATGTTCATAGTTGCTTAAGATACATTCACAATTCAATTTCACGCAACCTAAATCCACAAATTCTCGTTTTGCATTTCTCAGTTCATAATTGAATCGCAAAACCCAGAAAATTTGGATCCCAATCCGGAAACCGATGCGACCGAAGATCGAGACCGAGCAGAATCACAGCCATCGGAAGCCAATCTCCATCCTCCCAAAGCGCATAATCTTGGTCCGCCACGGTGAATCTCAGGGCAATCTCAACTCTGCGACCTACACCACAACCCCTGATTACAAAGTCCCATTAACTGAAGTGGGTTTGATTCAGGCTCGAACCGCAGGTATCGAGCTCCATAGATTGTTGTCCAATGACGGAACGAACCCTCATTGGCGAGTCTACTTCTATGTTTCGCCCTACGAGCGCACCCGATCCACACTCCGTGAGATCGGCCGCGCGTTCTCGAAGAAGAGGATTATTGGGGTTAGAGAGGAGTGTAGAATCAGAGAGCAGGACTTTGGGAATTTTCAAGTGGAGGAGAGGATGAAGGTTGTGAAGGAGACGAGGGAGAGATTTGGAAGATTCTTCTATCGGTTCCCTGAGGGAGAGTCCGCTGCCGATGTTTACGATCGCGTTTCCAGCTTTCTCGAGTCCCTATGGAGGGACATAGACATGAACAGGCTCCGCCACAACCCTTCCCAAGATCTCAACCTTATAATCATATCTCATGGGCTAACGTCTCGTGTCTTCCTCACAAAATGGTTCAAATGGACAGTTGAGCAATTTGAGTACCTGAACAATCCCGAAAACTGCGAATACCGAGTGATGCAGTTGGGTGAAGGTGGGGAATACAGCTTAGCCATTCATCACACAGAGGAAGAAATGCTGGAATGGGGGCTTTCTCCTGAGATGATATCTGACCAGAAATGGAGAGCACGTGCCAACAAAGGTCAATGGAATGAAAGATGTCCCTGGTATCTTGATGCTTTCTTTCATAACCTAGCTGACTCGGACGGCGAAGATAGCTGTGATGAACCGTGTCAGGATCACAATGAATTAGTTGAATCTTGTTCAAGTGTAGTGCTCACAGAGGAATGACAATTACACTTTACATTCTTTGAATTTGATAGGGATCTGATCTGATGGGTTGAAAGCGCAACACACGATCGGACCGCCTTAAAAGAAATTAGTGAAGGTGATCAGCATAGGTGAGTGGGGAGGGAAGTTCAACTTCCCTCACGTTGAATAGAGATAAGATCTCTATTGTGAAAGCTATGTGAAATTCATAGAGATTTTTCTCATCCTCACTTGTTGCTCTTAAGAAGCATTTCTCCACTCTTTCCCTCTTTTCTATCACAAAAGGTTACCACAAACCTCCTTGTCCCAAGCAGGGAAGATTAATTGGTGATGTTCTTGCAGAAACGAGAGATTATTACCTTTTGAAGATAAGATCAACAAAGATATTTAGCTTCCTTTCCTTGAATCTTGTGGTGTGATTCAAAGCATATGTATTTATTTTTGTCTTGTACAAATTCATAAAACAATGTTGGGGCAAAGTGATTAAACGCTTCTGCCAAGAGGATTCAAATCCTTTCATAAACTTGTCAGGATAATGCTTCACAAGTTAAAAAATAAATGCATAATTAAAGCAC ATGCGACCGAAGATCGAGACCGAGCAGAATCACAGCCATCGGAAGCCAATCTCCATCCTCCCAAAGCGCATAATCTTGGTCCGCCACGGTGAATCTCAGGGCAATCTCAACTCTGCGACCTACACCACAACCCCTGATTACAAAGTCCCATTAACTGAAGTGGGTTTGATTCAGGCTCGAACCGCAGGTATCGAGCTCCATAGATTGTTGTCCAATGACGGAACGAACCCTCATTGGCGAGTCTACTTCTATGTTTCGCCCTACGAGCGCACCCGATCCACACTCCGTGAGATCGGCCGCGCGTTCTCGAAGAAGAGGATTATTGGGGTTAGAGAGGAGTGTAGAATCAGAGAGCAGGACTTTGGGAATTTTCAAGTGGAGGAGAGGATGAAGGTTGTGAAGGAGACGAGGGAGAGATTTGGAAGATTCTTCTATCGGTTCCCTGAGGGAGAGTCCGCTGCCGATGTTTACGATCGCGTTTCCAGCTTTCTCGAGTCCCTATGGAGGGACATAGACATGAACAGGCTCCGCCACAACCCTTCCCAAGATCTCAACCTTATAATCATATCTCATGGGCTAACGTCTCGTGTCTTCCTCACAAAATGGTTCAAATGGACAGTTGAGCAATTTGAGTACCTGAACAATCCCGAAAACTGCGAATACCGAGTGATGCAGTTGGGTGAAGGTGGGGAATACAGCTTAGCCATTCATCACACAGAGGAAGAAATGCTGGAATGGGGGCTTTCTCCTGAGATGATATCTGACCAGAAATGGAGAGCACGTGCCAACAAAGGTCAATGGAATGAAAGATGTCCCTGGTATCTTGATGCTTTCTTTCATAACCTAGCTGACTCGGACGGCGAAGATAGCTGTGATGAACCGTGTCAGGATCACAATGAATTAGTTGAATCTTGTTCAAGTGTAGTGCTCACAGAGGAATGA MRPKIETEQNHSHRKPISILPKRIILVRHGESQGNLNSATYTTTPDYKVPLTEVGLIQARTAGIELHRLLSNDGTNPHWRVYFYVSPYERTRSTLREIGRAFSKKRIIGVREECRIREQDFGNFQVEERMKVVKETRERFGRFFYRFPEGESAADVYDRVSSFLESLWRDIDMNRLRHNPSQDLNLIIISHGLTSRVFLTKWFKWTVEQFEYLNNPENCEYRVMQLGEGGEYSLAIHHTEEEMLEWGLSPEMISDQKWRARANKGQWNERCPWYLDAFFHNLADSDGEDSCDEPCQDHNELVESCSSVVLTEE Homology
BLAST of Clc03G18250 vs. NCBI nr
Match: XP_038877694.1 (phosphoglycerate mutase-like protein AT74 [Benincasa hispida] >XP_038877695.1 phosphoglycerate mutase-like protein AT74 [Benincasa hispida] >XP_038877696.1 phosphoglycerate mutase-like protein AT74 [Benincasa hispida]) HSP 1 Score: 617.8 bits (1592), Expect = 5.0e-173 Identity = 297/313 (94.89%), Postives = 304/313 (97.12%), Query Frame = 0
BLAST of Clc03G18250 vs. NCBI nr
Match: XP_022931764.1 (phosphoglycerate mutase-like protein AT74 [Cucurbita moschata]) HSP 1 Score: 614.0 bits (1582), Expect = 7.2e-172 Identity = 292/313 (93.29%), Postives = 302/313 (96.49%), Query Frame = 0
BLAST of Clc03G18250 vs. NCBI nr
Match: KAG6590328.1 (Phosphoglycerate mutase-like protein AT74, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 613.6 bits (1581), Expect = 9.4e-172 Identity = 291/313 (92.97%), Postives = 302/313 (96.49%), Query Frame = 0
BLAST of Clc03G18250 vs. NCBI nr
Match: XP_022974467.1 (phosphoglycerate mutase-like protein AT74 [Cucurbita maxima]) HSP 1 Score: 611.3 bits (1575), Expect = 4.7e-171 Identity = 290/313 (92.65%), Postives = 302/313 (96.49%), Query Frame = 0
BLAST of Clc03G18250 vs. NCBI nr
Match: XP_023520733.1 (phosphoglycerate mutase-like protein AT74 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 606.7 bits (1563), Expect = 1.1e-169 Identity = 291/319 (91.22%), Postives = 302/319 (94.67%), Query Frame = 0
BLAST of Clc03G18250 vs. ExPASy Swiss-Prot
Match: Q9MAA2 (Phosphoglycerate mutase-like protein AT74 OS=Arabidopsis thaliana OX=3702 GN=At3g05170 PE=2 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 1.1e-122 Identity = 206/283 (72.79%), Postives = 244/283 (86.22%), Query Frame = 0
BLAST of Clc03G18250 vs. ExPASy Swiss-Prot
Match: O04035 (Phosphoglycerate mutase-like protein AT74H OS=Arabidopsis thaliana OX=3702 GN=At1g08940 PE=3 SV=2) HSP 1 Score: 385.6 bits (989), Expect = 5.5e-106 Identity = 185/275 (67.27%), Postives = 224/275 (81.45%), Query Frame = 0
BLAST of Clc03G18250 vs. ExPASy Swiss-Prot
Match: Q99288 (Broad-range acid phosphatase DET1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=DET1 PE=1 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 6.6e-35 Identity = 102/303 (33.66%), Postives = 140/303 (46.20%), Query Frame = 0
BLAST of Clc03G18250 vs. ExPASy TrEMBL
Match: A0A6J1EV53 (phosphoglycerate mutase-like protein AT74 OS=Cucurbita moschata OX=3662 GN=LOC111438034 PE=4 SV=1) HSP 1 Score: 614.0 bits (1582), Expect = 3.5e-172 Identity = 292/313 (93.29%), Postives = 302/313 (96.49%), Query Frame = 0
BLAST of Clc03G18250 vs. ExPASy TrEMBL
Match: A0A6J1IAB4 (phosphoglycerate mutase-like protein AT74 OS=Cucurbita maxima OX=3661 GN=LOC111473124 PE=4 SV=1) HSP 1 Score: 611.3 bits (1575), Expect = 2.3e-171 Identity = 290/313 (92.65%), Postives = 302/313 (96.49%), Query Frame = 0
BLAST of Clc03G18250 vs. ExPASy TrEMBL
Match: A0A6J1E5A9 (phosphoglycerate mutase-like protein AT74 OS=Momordica charantia OX=3673 GN=LOC111026172 PE=4 SV=1) HSP 1 Score: 598.2 bits (1541), Expect = 2.0e-167 Identity = 283/312 (90.71%), Postives = 297/312 (95.19%), Query Frame = 0
BLAST of Clc03G18250 vs. ExPASy TrEMBL
Match: A0A1S3BP58 (phosphoglycerate mutase-like protein AT74 OS=Cucumis melo OX=3656 GN=LOC103492198 PE=4 SV=1) HSP 1 Score: 596.7 bits (1537), Expect = 5.7e-167 Identity = 288/313 (92.01%), Postives = 295/313 (94.25%), Query Frame = 0
BLAST of Clc03G18250 vs. ExPASy TrEMBL
Match: A0A5D3CFF3 (Phosphoglycerate mutase-like protein AT74 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003610 PE=4 SV=1) HSP 1 Score: 596.7 bits (1537), Expect = 5.7e-167 Identity = 288/313 (92.01%), Postives = 295/313 (94.25%), Query Frame = 0
BLAST of Clc03G18250 vs. TAIR 10
Match: AT3G05170.1 (Phosphoglycerate mutase family protein ) HSP 1 Score: 441.0 bits (1133), Expect = 7.8e-124 Identity = 206/283 (72.79%), Postives = 244/283 (86.22%), Query Frame = 0
BLAST of Clc03G18250 vs. TAIR 10
Match: AT1G08940.1 (Phosphoglycerate mutase family protein ) HSP 1 Score: 385.6 bits (989), Expect = 3.9e-107 Identity = 185/275 (67.27%), Postives = 224/275 (81.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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