Clc03G18110 (gene) Watermelon (cordophanus) v2

Overview
NameClc03G18110
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box domain-containing protein
LocationClcChr03: 30440571 .. 30442777 (-)
RNA-Seq ExpressionClc03G18110
SyntenyClc03G18110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAAATCCCCTAACCAAAAATAAAATAAAATGTACATCTGCCACTGCACTAGGCGGCGGGCAGCCATATTTGGCTGAATTGGATTCATCGGCAGCGTTTCTCCCAGAGGTCTGAGGATGGAGAAGAAGCCGAATAGTAAGATTAAGAACACAAATTCGGAGCTTCCACCTGATGTCCTTCAACTAATCTTCTCGAAACTCCCCTTCTTCAATTTGCCCACTTGCAGGCTCGTCTCTAAAACATGGAACAATCTTATTTTATCTTGTAAGTTCGATCCTTCAATCTCCATTTCCGATTTCTTCTTTGCCCATTTTTATTCCTGTCGTGATCGCAATCTCCATTGTGTGGAGTTGGATCCTCAACATTTGGAAGGAATGAGTACTGTTGCCTCATTCACCTTCCACCCTAATTTTTCCTCCGGTTCTTGTAAAATCCAAATTATCAATTCCTGTTCTGGACTTATCTCGCTTCTTATCACCAAAAGAAGAAGACGAGGGCATAGACCTGATGTTGTTTGTGTATTGAATCCCATGACTAATGAATACTTCAAACTTCCAACATTCAGATCGAAAGGAGATAGGGTTCAAAACTATTTTTATGGATTAGGGTTTAATCCTAGAACAAAACACTACAAATTAGCGAGAACCCACTTTGTATGTGATGAATTCATAGTAGACATTTATGCATTTGGTACAAGTTGTGAATGGACCCCTGTTGGCTCAGTGCCTTATTTTCTCAATGAATACCATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTTGGAGCTCAGAAGCTACCTAATGCTGGAGTAAGTGATTATATTGATGTTATTTATCGTTTGGATTTAGAAGATGAGAAATTCGAGCAAATTTCTTTTCCATTAGATGGGGGTGATGAGGGTGATTCTCCTTACATTGGAGTCTATAATGGCAGTCTGTATCTAACTCTTTTCTGTGAGGATTTTGAGTACCATGTGTGGAAGATGGAAGAAGATTTTTCGTGGATTAAGGAATTTGTTCTTGCTCTACCAGAAAATGTGTATAGTTCTTTCCGTCGTCATCACCCTGTAGAATATCATCTCCAACTCATCAAACCTTGTGAAGATGGGAACATCTTGTGTCTTTGTGCTGGACTCCAATTAATATTGTATGACCCCAAGACTGAGACGATGGAGGTATTGACCGATCAAGATTTCGAAATTAAGAAATATATGTGGGTTCATCAGATTGACTCCTTCAATTTTAATTCTCTCCAACACATTTTGGCTGGAAACTGTTGAATGATTTAGTTTTTTGGGGGAAAATTCATGTAATGAGTATTGATATATGGAACTTGTTCAATGTAGTTTTGATCCTATGAATTTCATCTTTTTCTCTCCACGTCTTAAAATTTTTTTAGCGAAACTAAAAACTTGAAAAGTGAGTTTTTTTTTTCTTTAGAAAAATTTAAATTATTTGTATTTAACTCTTAGTATACTATATAATAGATACTTCTATCTTATAATCTAGCAAGGTTTCAACCCTGATAAACTTATTTAAACTTTCCTCTAGCTCTACCATCTGTGCATTAATTCATCTTATATCATTTGAGATTTTATTCCAAACTTTATCTGCCAGATACACACTGCACAGAATTAGAGGGAAGGAGAAATAGTTGGTTTCTTTTTGGGAATTGAGGAGACAGTTTTGATTCGTTTAGGTCACAGGTTTCATAGTTCATTATTGTTGACTTGTTCTTTTTTCTAACTAGTTGGTTCTGTTGCCTTAATTAGAAAGCTCACTAGTTTAAATTGCTTGAAATCAGTATGTTATTCTTTTAGGTACAGATAATTTTATCTTTGCTAGTCATAAAAACTAGAAATTCTTATGTGTCATGATTTTGATGAAGTTTCCATTCTCACTTGATGAAGTTTTTCACATATCATTCTTCTATCTTCTTCAAGAGTTCCTCAAATAACTGTCAAAGGTATTTGTGAATGAATTGGAAGTTGTCTCTGTATTGTTCATTGGCATCCATGTAGAATTAATTTCTTTTTTCTCCTTTTGAATTTCAGAATTATGATGATGTAAGGTCCCAAATTACTTATAGGAGGAGCCTAGGAGGGGTGAAAAGGGAAAGAGGGTAGGTTTTATGAAAAGTTTGGCTAAGTCTTTGGGGTGGAGGGATTCCCATCTCTAGAAATAGTTGGTGTCTTTTTT

mRNA sequence

AAAAAAAAAAAAATCCCCTAACCAAAAATAAAATAAAATGTACATCTGCCACTGCACTAGGCGGCGGGCAGCCATATTTGGCTGAATTGGATTCATCGGCAGCGTTTCTCCCAGAGGTCTGAGGATGGAGAAGAAGCCGAATAGTAAGATTAAGAACACAAATTCGGAGCTTCCACCTGATGTCCTTCAACTAATCTTCTCGAAACTCCCCTTCTTCAATTTGCCCACTTGCAGGCTCGTCTCTAAAACATGGAACAATCTTATTTTATCTTGTAAGTTCGATCCTTCAATCTCCATTTCCGATTTCTTCTTTGCCCATTTTTATTCCTGTCGTGATCGCAATCTCCATTGTGTGGAGTTGGATCCTCAACATTTGGAAGGAATGAGTACTGTTGCCTCATTCACCTTCCACCCTAATTTTTCCTCCGGTTCTTGTAAAATCCAAATTATCAATTCCTGTTCTGGACTTATCTCGCTTCTTATCACCAAAAGAAGAAGACGAGGGCATAGACCTGATGTTGTTTGTGTATTGAATCCCATGACTAATGAATACTTCAAACTTCCAACATTCAGATCGAAAGGAGATAGGGTTCAAAACTATTTTTATGGATTAGGGTTTAATCCTAGAACAAAACACTACAAATTAGCGAGAACCCACTTTGTATGTGATGAATTCATAGTAGACATTTATGCATTTGGTACAAGTTGTGAATGGACCCCTGTTGGCTCAGTGCCTTATTTTCTCAATGAATACCATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTTGGAGCTCAGAAGCTACCTAATGCTGGAGTAAGTGATTATATTGATGTTATTTATCGTTTGGATTTAGAAGATGAGAAATTCGAGCAAATTTCTTTTCCATTAGATGGGGGTGATGAGGGTGATTCTCCTTACATTGGAGTCTATAATGGCAGTCTGTATCTAACTCTTTTCTGTGAGGATTTTGAGTACCATGTGTGGAAGATGGAAGAAGATTTTTCGTGGATTAAGGAATTTGTTCTTGCTCTACCAGAAAATGTGTATAGTTCTTTCCGTCGTCATCACCCTGTAGAATATCATCTCCAACTCATCAAACCTTGTGAAGATGGGAACATCTTGTGTCTTTGTGCTGGACTCCAATTAATATTGTATGACCCCAAGACTGAGACGATGGAGGTATTGACCGATCAAGATTTCGAAATTAAGAAATATATGTGGGTTCATCAGATTGACTCCTTCAATTTTAATTCTCTCCAACACATTTTGGCTGGAAACTGTTGAATGATTTAGTTTTTTGGGGGAAAATTCATGTAATGAGTATTGATATATGGAACTTGTTCAATGTAGTTTTGATCCTATGAATTTCATCTTTTTCTCTCCACGTCTTAAAATTTTTTTAGCGAAACTAAAAACTTGAAAAGTGAGTTTTTTTTTTCTTTAGAAAAATTTAAATTATTTGTATTTAACTCTTAGTATACTATATAATAGATACTTCTATCTTATAATCTAGCAAGGTTTCAACCCTGATAAACTTATTTAAACTTTCCTCTAGCTCTACCATCTGTGCATTAATTCATCTTATATCATTTGAGATTTTATTCCAAACTTTATCTGCCAGATACACACTGCACAGAATTAGAGGGAAGGAGAAATAGTTGGTTTCTTTTTGGGAATTGAGGAGACAGTTTTGATTCGTTTAGGTCACAGGTTTCATAGTTCATTATTGTTGACTTGTTCTTTTTTCTAACTAGTTGGTTCTGTTGCCTTAATTAGAAAGCTCACTAGTTTAAATTGCTTGAAATCAGTATGTTATTCTTTTAGGTACAGATAATTTTATCTTTGCTAGTCATAAAAACTAGAAATTCTTATGTGTCATGATTTTGATGAAGTTTCCATTCTCACTTGATGAAGTTTTTCACATATCATTCTTCTATCTTCTTCAAGAGTTCCTCAAATAACTGTCAAAGGTATTTGTGAATGAATTGGAAGTTGTCTCTGTATTGTTCATTGGCATCCATGTAGAATTAATTTCTTTTTTCTCCTTTTGAATTTCAGAATTATGATGATGTAAGGTCCCAAATTACTTATAGGAGGAGCCTAGGAGGGGTGAAAAGGGAAAGAGGGTAGGTTTTATGAAAAGTTTGGCTAAGTCTTTGGGGTGGAGGGATTCCCATCTCTAGAAATAGTTGGTGTCTTTTTT

Coding sequence (CDS)

ATGGAGAAGAAGCCGAATAGTAAGATTAAGAACACAAATTCGGAGCTTCCACCTGATGTCCTTCAACTAATCTTCTCGAAACTCCCCTTCTTCAATTTGCCCACTTGCAGGCTCGTCTCTAAAACATGGAACAATCTTATTTTATCTTGTAAGTTCGATCCTTCAATCTCCATTTCCGATTTCTTCTTTGCCCATTTTTATTCCTGTCGTGATCGCAATCTCCATTGTGTGGAGTTGGATCCTCAACATTTGGAAGGAATGAGTACTGTTGCCTCATTCACCTTCCACCCTAATTTTTCCTCCGGTTCTTGTAAAATCCAAATTATCAATTCCTGTTCTGGACTTATCTCGCTTCTTATCACCAAAAGAAGAAGACGAGGGCATAGACCTGATGTTGTTTGTGTATTGAATCCCATGACTAATGAATACTTCAAACTTCCAACATTCAGATCGAAAGGAGATAGGGTTCAAAACTATTTTTATGGATTAGGGTTTAATCCTAGAACAAAACACTACAAATTAGCGAGAACCCACTTTGTATGTGATGAATTCATAGTAGACATTTATGCATTTGGTACAAGTTGTGAATGGACCCCTGTTGGCTCAGTGCCTTATTTTCTCAATGAATACCATGGTGTTTACTTCAATGGAGGCCTCTATTGGGTTGGAGCTCAGAAGCTACCTAATGCTGGAGTAAGTGATTATATTGATGTTATTTATCGTTTGGATTTAGAAGATGAGAAATTCGAGCAAATTTCTTTTCCATTAGATGGGGGTGATGAGGGTGATTCTCCTTACATTGGAGTCTATAATGGCAGTCTGTATCTAACTCTTTTCTGTGAGGATTTTGAGTACCATGTGTGGAAGATGGAAGAAGATTTTTCGTGGATTAAGGAATTTGTTCTTGCTCTACCAGAAAATGTGTATAGTTCTTTCCGTCGTCATCACCCTGTAGAATATCATCTCCAACTCATCAAACCTTGTGAAGATGGGAACATCTTGTGTCTTTGTGCTGGACTCCAATTAATATTGTATGACCCCAAGACTGAGACGATGGAGGTATTGACCGATCAAGATTTCGAAATTAAGAAATATATGTGGGTTCATCAGATTGACTCCTTCAATTTTAATTCTCTCCAACACATTTTGGCTGGAAACTGTTGA

Protein sequence

MEKKPNSKIKNTNSELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISDFFFAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISLLITKRRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFVCDEFIVDIYAFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVGAQKLPNAGVSDYIDVIYRLDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLFCEDFEYHVWKMEEDFSWIKEFVLALPENVYSSFRRHHPVEYHLQLIKPCEDGNILCLCAGLQLILYDPKTETMEVLTDQDFEIKKYMWVHQIDSFNFNSLQHILAGNC
Homology
BLAST of Clc03G18110 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 721.5 bits (1861), Expect = 4.0e-204
Identity = 337/387 (87.08%), Postives = 358/387 (92.51%), Query Frame = 0

Query: 1   MEKKPNSKIKNTNSELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISD 60
           MEKKP SKIK TNSELPPD+LQLIFSKLPFFNLPTCRLVS TWNNL+LSCKFDPSISIS+
Sbjct: 1   MEKKPKSKIKTTNSELPPDILQLIFSKLPFFNLPTCRLVSATWNNLVLSCKFDPSISISN 60

Query: 61  FFFAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISLLI 120
            FFAHFYSCRDRNLHCV+LDPQHLEGMSTVASFTFHPN SSGSCKI IINSCSGLISLLI
Sbjct: 61  LFFAHFYSCRDRNLHCVDLDPQHLEGMSTVASFTFHPNVSSGSCKISIINSCSGLISLLI 120

Query: 121 TKRRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFV 180
           TKRRRRGHRP VVCVLNPMTNEYFKLPTFRSKGD V++YFYGLGF+PRTK YKLARTH+V
Sbjct: 121 TKRRRRGHRPGVVCVLNPMTNEYFKLPTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHYV 180

Query: 181 CDEFIVDIYAFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVGAQKLPNAGVSDYIDVIY 240
           C EFIV+I+AFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVG Q+LPNAG+S   DVIY
Sbjct: 181 CHEFIVEIFAFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVGGQQLPNAGLS---DVIY 240

Query: 241 RLDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLFCEDFEYHVWKMEEDFSWIKEF 300
           RLDLED+KF+QISFPLDG DEGD PYIGVYN +LYLTL C DFEYHVWKMEEDFSWIKEF
Sbjct: 241 RLDLEDDKFKQISFPLDGDDEGDFPYIGVYNDTLYLTLCCGDFEYHVWKMEEDFSWIKEF 300

Query: 301 VLALPENVYSSFRRHHPVEYHLQLIKPCEDGNILCLCAGLQLILYDPKTETMEVLTDQDF 360
           VLALPENV+ S  RHHP+ Y LQLIK CEDGNILCLCAGL LILYDPKTET E+LTDQDF
Sbjct: 301 VLALPENVHHSLPRHHPIGYCLQLIKACEDGNILCLCAGLYLILYDPKTETTELLTDQDF 360

Query: 361 EIKKYMWVHQIDSFNFNSLQHILAGNC 388
           EIKK+MWV+QIDSFNFNSL +ILAG C
Sbjct: 361 EIKKHMWVYQIDSFNFNSLHNILAGKC 384

BLAST of Clc03G18110 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 653.3 bits (1684), Expect = 1.3e-183
Identity = 308/387 (79.59%), Postives = 336/387 (86.82%), Query Frame = 0

Query: 1   MEKKPNSKIKNTNSELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISD 60
           MEKKP + I N  SELPPDVLQLIFSKLPFFNLPTCRLVS TWNNLI SCKFDPSISIS 
Sbjct: 1   MEKKPKTNIVNKRSELPPDVLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISH 60

Query: 61  FFFAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISLLI 120
            FFA FYS R  NLHCVE DPQH EGMSTVASF FHP+ SSGSC+I IINSCSGLISL+I
Sbjct: 61  LFFARFYSSRHPNLHCVEFDPQHAEGMSTVASFAFHPDLSSGSCRITIINSCSGLISLII 120

Query: 121 TKRRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFV 180
            KRRRRGHR D+VCVLNP+TNEYFKLPT RSKGDRV NY YGLGF+P T  YKLARTHF 
Sbjct: 121 NKRRRRGHRLDLVCVLNPITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFT 180

Query: 181 CDEFIVDIYAFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVGAQKLPNAGVSDYIDVIY 240
            DEFIVDI+AFGTSCEWTPVGSVP FLNEYHGVY NGGLYWVG+QKLPN G+SDY +VIY
Sbjct: 181 HDEFIVDIFAFGTSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIY 240

Query: 241 RLDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLFCEDFEYHVWKMEEDFSWIKEF 300
           RLDL+DEKFE+ISFPLDGGD+   PYI VYNG+LYLT  CEDF+YH WKMEEDFSW KEF
Sbjct: 241 RLDLKDEKFEKISFPLDGGDD---PYIAVYNGTLYLTFCCEDFDYHAWKMEEDFSWSKEF 300

Query: 301 VLALPENVYSSFRRHHPVEYHLQLIKPCEDGNILCLCAGLQLILYDPKTETMEVLTDQDF 360
           VLALPENV+ S  RHHP+ Y+LQLIK CEDGNILCL AG+ LILYDP T+T+E+LT+QDF
Sbjct: 301 VLALPENVHHSL-RHHPIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDF 360

Query: 361 EIKKYMWVHQIDSFNFNSLQHILAGNC 388
           EIK+ MWVHQI+SF+FNSL +ILAG C
Sbjct: 361 EIKEAMWVHQIESFSFNSLHNILAGKC 383

BLAST of Clc03G18110 vs. NCBI nr
Match: XP_008450717.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 615.9 bits (1587), Expect = 2.3e-172
Identity = 287/386 (74.35%), Postives = 325/386 (84.20%), Query Frame = 0

Query: 3   KKPNSKIKNTNSELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISDFF 62
           +KP + I N + ELPPD+LQ IFSK+PFFNLPTCRLVS+TWNNLI SCKFDPS SI   F
Sbjct: 2   EKPKTNIINKSYELPPDILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLF 61

Query: 63  FAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISLLITK 122
           FA FYS R RNLHCVE DPQH+EGMS VASF FHP+F S S +I IINSCSGLISLLITK
Sbjct: 62  FARFYSSRHRNLHCVEFDPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITK 121

Query: 123 RRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFVCD 182
           RRRRG R DVVCVLNP+TNEYFK P  R KGD+V NY YGLGF+P+T  YKLARTHF  +
Sbjct: 122 RRRRGQRRDVVCVLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHN 181

Query: 183 EFIVDIYAFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVGAQK-LPNAGVSDYIDVIYR 242
           EFIVDI+AFGTSCEWTP+GSVP FLNEYHGVYFNGGLYWVG+QK LPN G+SDY  V+YR
Sbjct: 182 EFIVDIFAFGTSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYR 241

Query: 243 LDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLFCEDFEYHVWKMEEDFSWIKEFV 302
           LDL DEKF++IS P  GGDE   PY+GVYNG+LYLTL CEDF+YHVWKM+EDFSW KEFV
Sbjct: 242 LDLNDEKFKKISIPF-GGDE---PYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFV 301

Query: 303 LALPENVYSSFRRHHPVEYHLQLIKPCEDGNILCLCAGLQLILYDPKTETMEVLTDQDFE 362
           LALPEN+  S  RHHP+ Y+LQL+K CEDG+ILCLCAG+ LI+YDPKT+ ME+LTDQDFE
Sbjct: 302 LALPENILHSLHRHHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFE 361

Query: 363 IKKYMWVHQIDSFNFNSLQHILAGNC 388
           IK+ MW HQI+SF+FNSL + L G C
Sbjct: 362 IKEGMWFHQIESFSFNSLHNTLTGKC 383

BLAST of Clc03G18110 vs. NCBI nr
Match: XP_038883771.1 (putative F-box protein At1g60370 [Benincasa hispida])

HSP 1 Score: 400.6 bits (1028), Expect = 1.5e-107
Identity = 215/393 (54.71%), Postives = 274/393 (69.72%), Query Frame = 0

Query: 1   MEKKPNSKI-KNTNSELPPD-VLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISI 60
           MEKK NS+I K+++SELPPD ++Q+I SK+P FNLP+CRLV K WNNL+L+CKFDP + I
Sbjct: 1   MEKKRNSEIRKSSDSELPPDNIIQVILSKVPLFNLPSCRLVCKAWNNLVLTCKFDPPLLI 60

Query: 61  SDFFFAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISL 120
           S    A  Y C  RNL+C++ + ++LEGMS+V SFTFHP F + S  I IINSC+GL+SL
Sbjct: 61  SSLSLA--YDCPSRNLYCMDFNLKYLEGMSSVVSFTFHPKFFTSS--ISIINSCNGLLSL 120

Query: 121 LITKRRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRV--QNYFYGLGFNPRTKHYKLAR 180
           LI+KR+       V+C+LNPMTNEYFK P  +SK      + Y YGLGF+P TK YK+AR
Sbjct: 121 LISKRKSGSPISYVLCILNPMTNEYFKFPAEKSKTHCCCGRPYSYGLGFSPETKQYKIAR 180

Query: 181 THFVCDEFI--VDIYAFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVGAQKLPNAGVSD 240
           T F+ DE    V+I+AFGT+ EWTPVG +P  + E HGVYFNGGLYW   +  P     D
Sbjct: 181 TSFLRDESTTSVEIFAFGTTREWTPVGVLPSLVVEDHGVYFNGGLYWTVDELQPR----D 240

Query: 241 YIDVIYRLDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLF--CEDFEYHVWKMEE 300
             + IYRLD+E+EK E+IS P  GG      + GV++G+LYLT +    D  Y VWKMEE
Sbjct: 241 SNNAIYRLDIENEKLEKISCPHYGGGHF---FFGVFDGTLYLTTYTGTVDNIYQVWKMEE 300

Query: 301 DFSWIKEFVLALPENVYSSFRRHHPVEYHLQLIKPCEDGNILCLCAGLQLILYDPKTETM 360
           + SWIK FVL+ PEN+             LQ IK CEDG ILCL AG  LILYDPKT+ +
Sbjct: 301 NLSWIKAFVLSRPENLRHPEHDQPWGVSQLQPIKVCEDGKILCLLAGFLLILYDPKTKRV 360

Query: 361 EVLTDQDFEIKKYMWVHQIDSFNFNSLQHILAG 386
           ++LT+QD E ++++ VHQIDS NFNSL +ILAG
Sbjct: 361 KILTNQDVETERHLHVHQIDSSNFNSLPNILAG 382

BLAST of Clc03G18110 vs. NCBI nr
Match: XP_004134745.1 (F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g07870 [Cucumis sativus] >XP_031743637.1 F-box protein At3g07870 [Cucumis sativus] >KGN49139.1 hypothetical protein Csa_003023 [Cucumis sativus])

HSP 1 Score: 391.3 bits (1004), Expect = 9.4e-105
Identity = 208/394 (52.79%), Postives = 271/394 (68.78%), Query Frame = 0

Query: 1   MEKKPNSKIKN-TNSELPPD-VLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISI 60
           MEKK   +IK  +NSE PPD ++Q+I SK+P FNL +CRLV K+WNNLIL+CKFDPS+  
Sbjct: 1   MEKKWKGEIKKLSNSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSL-- 60

Query: 61  SDFFFAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISL 120
              F +  Y C  R L+CV+ DP + EGM+++ SFTFHP FS+    I IIN+C+GL+SL
Sbjct: 61  ---FLSFAYDCPSRTLYCVDFDPMYFEGMNSIGSFTFHPKFSTSDSSISIINACNGLLSL 120

Query: 121 LITKRRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRV--QNYFYGLGFNPRTKHYKLAR 180
           LI+K R+ G    V+ +LNPMTNEYFK P  +SK      + Y YGLGFNP+TK YK+AR
Sbjct: 121 LISK-RKLGSVSYVLGILNPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIAR 180

Query: 181 THFVCDE--FIVDIYAFGTSCE-WTPVGSVPYFLNEYHGVYFNGGLYWVGAQKLPNAGVS 240
           T F  DE   +V+I+ FG++ + WTPVG +P  + E HGVYF GGLYWV  Q  P+    
Sbjct: 181 TSFRPDESTTLVEIFTFGSTHQVWTPVGFLPSLVVEDHGVYFKGGLYWVANQPDPH---D 240

Query: 241 DYIDVIYRLDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLFCEDFEYHVWKMEED 300
             I  IYRLDLE+EK E+IS P   G      + GV++G+LYLT+  ++ +Y VWKM+++
Sbjct: 241 SSISAIYRLDLENEKLEKISCPQYIGGHF---FFGVFDGTLYLTV-SKNNKYQVWKMKDN 300

Query: 301 FSWIKEFVLALPENVYSSFRRHHPVEY-HLQLIKPCEDGNILCLCAGLQLILYDPKTETM 360
           FSWIK FV++ P N+      H P     L  IK CEDG ILCL AGL LILYDPKT++ 
Sbjct: 301 FSWIKAFVISRPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSA 360

Query: 361 EVLTDQDFEIKKYMWVHQIDSFNFNSLQHILAGN 387
           E+LTDQ  +++K++ VH ID+FNFNSL  ILAGN
Sbjct: 361 EILTDQSVKVEKHLHVHHIDAFNFNSLPSILAGN 381

BLAST of Clc03G18110 vs. ExPASy Swiss-Prot
Match: Q9LJC0 (Putative F-box protein At3g21120 OS=Arabidopsis thaliana OX=3702 GN=At3g21120 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.9e-09
Identity = 77/319 (24.14%), Postives = 128/319 (40.13%), Query Frame = 0

Query: 16  LPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFD-----------PSISISDFFFA 75
           LP D++  I SK+P  +L   R   + WN L++   F            P + +   F  
Sbjct: 3   LPEDLVLEILSKVPAVSLARFRSTCRRWNALVVDGSFAKKHYAYGPRQYPIVIMLIEFRV 62

Query: 76  HFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINS--CSGLISLLITK 135
           +  S    +LH +  +            F+     S+ S ++ I N+  C GL+ L  TK
Sbjct: 63  YLVSI---DLHGIN-NNNGAPSAKLTGQFSLKDPLSNSSEEVDIRNAFHCDGLL-LCCTK 122

Query: 136 RRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFVCD 195
            RR       + V NP + E       + +    ++  Y LG++ R+  YK+ R H V +
Sbjct: 123 DRR-------LVVWNPCSGE---TKWIQPRNSYKESDLYALGYDNRSSSYKILRMHPVGN 182

Query: 196 EFIV--DIYAFGTSCEWTPVGSVPYF---LNEYHGVYFNGGLYWVGAQKLPNAGVSDYID 255
            F +  ++Y F  S  W  VG    F    NE +G+   G  YW    K  +   SD   
Sbjct: 183 PFHIESEVYDF-ASHSWRSVGVTTDFHIQTNESYGMNVKGTTYWFALSK--DWWSSDDRR 242

Query: 256 VIYRLDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLFCEDFEYHVWKMEEDFSWI 315
            +   D   E+F+ +  P D  +   +  + V      L +F      +V+K++   +  
Sbjct: 243 FLLSFDFSRERFQCLPLPADVKNLHLTVVLSVTREEQQLCMFATLGAGNVYKLDVFVATK 301

Query: 316 KEFVLALPENVYSSFRRHH 317
            E      E  ++ FRR H
Sbjct: 303 TEETTG--ELTWTKFRRFH 301

BLAST of Clc03G18110 vs. ExPASy Swiss-Prot
Match: Q9C627 (Putative F-box protein At1g46984 OS=Arabidopsis thaliana OX=3702 GN=At1g46984 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.7e-09
Identity = 60/250 (24.00%), Postives = 105/250 (42.00%), Query Frame = 0

Query: 14  SELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISD-----FFFAHFYS 73
           S LP D++  I S+LP  ++  CRLVSK W +++ S  F  S  I         F   Y 
Sbjct: 22  STLPIDLIIEILSRLPMNSIAICRLVSKQWASILQSSDFTESFLIKSPPRPRLLFTIRYG 81

Query: 74  CRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISLLITKRRRRGH 133
            +       +  P++ +    V +  +H  FS   C +Q     +G I  L  +   +G 
Sbjct: 82  SKWHLFSAPQ--PRNFDENFPVVATDYHKGFSGNWC-MQSFQLVNGFI-YLNNRLSLKGK 141

Query: 134 RPDVVCVLNPMTNEYFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFVCDEFIVDI 193
              V  + NP T +   LP    K    +++F   G++P  K +K+       +  ++ +
Sbjct: 142 IDRVSVIWNPSTGQQIPLPDLGVKNSHSKSFF---GYDPIEKQFKVLCITSSKEHQVLTL 201

Query: 194 YAFGTSCEWTPVG-SVPYF-LNEYHGVYFNGGLYWVGAQKLPNAGVSDYIDVIYRLDLED 253
              G    W  +  S P++   + +G+  NG LY+    +  NA       +I R D+  
Sbjct: 202 -GTGRKLSWRKIEYSYPHYPRKKSNGICINGVLYY----RNTNA-------MIVRFDVRS 252

Query: 254 EKFEQISFPL 257
           E+F  +   +
Sbjct: 262 EEFRFVEIKM 252

BLAST of Clc03G18110 vs. ExPASy Swiss-Prot
Match: Q9LUV7 (Putative F-box protein At3g22421 OS=Arabidopsis thaliana OX=3702 GN=At3g22421 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.5e-08
Identity = 78/326 (23.93%), Postives = 127/326 (38.96%), Query Frame = 0

Query: 12  TNSELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISDFFFAHFYSCRD 71
           T S LP ++L  I S++P  +    RL  K W++L  +  F    + +    +      D
Sbjct: 6   TISHLPTELLDEIISRVPLKSTRAVRLTCKNWDSLFKNRSFMKEEAAAKEGESRMIVLMD 65

Query: 72  RNLHC-------VELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISLLITKRR 131
           +NL         +++DP   +       +       S   KI  +  C GL+  ++   +
Sbjct: 66  KNLFAMSIFFNGIDIDPSAEQRGKLTCLYD-----DSEQVKISQVFHCEGLLLCVLEDDK 125

Query: 132 RRGHRPDVVCVLNPMTNEYFKL-PTFRSKGDRVQN------YFYGLGFNPRTKHYKLART 191
                   + V NP   +   + P + S   R+QN      Y Y LG+N +++ +K+ R 
Sbjct: 126 CS------LVVWNPYWGQTRWIEPRYFS---RIQNCYGRYMYVYALGYNNKSRSHKILR- 185

Query: 192 HFVCD----EFIVDIYAFGTSCEWTPVGSVP-YFLN------EYHGVYFNGGLYWVGAQK 251
            F+       F  +IY F +   WT +   P +F+N         GV   G  YW   ++
Sbjct: 186 -FIDGAFDFPFWYEIYDFDSDL-WTTLDVTPQWFINFPPRGCYNRGVTLKGNTYWCAIRR 245

Query: 252 LPNAGVSDYIDVIYRLDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSL----------YL 299
             N      +D I   D   E+F  +  PL        P++   +GSL            
Sbjct: 246 KSNTNWFVDLDHIICFDFTSERFGPL-MPL--------PFVRYTSGSLVTLSCVREEKLA 305

BLAST of Clc03G18110 vs. ExPASy Swiss-Prot
Match: Q8S8Q9 (F-box/LRR-repeat protein At2g43260 OS=Arabidopsis thaliana OX=3702 GN=At2g43260 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.5e-07
Identity = 78/334 (23.35%), Postives = 131/334 (39.22%), Query Frame = 0

Query: 2   EKKPNSKIKNTNSELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKF---DPSISI 61
           E+ PNS       ++ P++L+ +  +LP  ++  CR+VSK W +L+ S +F     S+  
Sbjct: 5   EENPNS------IDILPELLEEVLLRLPTKSILKCRIVSKQWRSLLESSRFAERHMSLQN 64

Query: 62  SDFFFAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISL 121
           S       Y+C D       L     EG   +     H + S  S       +C G+I  
Sbjct: 65  SRRRILAAYNC-DCGGRRKLLPESRFEGDEEIV--YLHCDASRPSM------TCQGVICF 124

Query: 122 LITKRRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRVQ----------NYFYGLGFNPR 181
                       D + VLNP T++  + P+  +   R +          N+  G G +  
Sbjct: 125 ---------PEQDWIIVLNPSTSQLRRFPSGLNHNCRFRIGLWKTFSPGNWVMGFGRDKV 184

Query: 182 TKHYKLARTHFVC-----DEFIVDIYAFGTSC-EWTPVGSVPYFLN-EYHGVYFNGGLYW 241
              YK+ R  F       +E +V+         EW  +   PY +N     V  NG +YW
Sbjct: 185 NGRYKVVRMSFAFWRVRQEEPVVECGVLDVDTGEWRKLSPPPYVVNVGSKSVCVNGSIYW 244

Query: 242 VGAQKLPNAGVSDYIDVIYR---LDLEDEKFEQISFPLDGGDEGDSPYIGVYNG-SLYLT 301
           +            +I  +YR   LDL  E+F ++  P       D+  + + +   L +T
Sbjct: 245 L------------HIQTVYRILALDLHKEEFHKVPVP-PTQITVDTQMVNLEDRLVLAIT 301

Query: 302 LFCEDFEYHVWKMEE-DFSWIKEFVLALPENVYS 311
               ++   VW M+     W K + ++L   V S
Sbjct: 305 RVSPEWILEVWGMDTYKEKWSKTYSISLDHRVVS 301

BLAST of Clc03G18110 vs. ExPASy Swiss-Prot
Match: Q9FFS9 (Putative F-box protein At5g41510 OS=Arabidopsis thaliana OX=3702 GN=At5g41510 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04
Identity = 67/262 (25.57%), Postives = 104/262 (39.69%), Query Frame = 0

Query: 14  SELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISDFFFAHF--YSCRD 73
           S LP D+++ IFS++P  ++   RL  K+WNNL  S           F   H    + R+
Sbjct: 6   SNLPRDLIEEIFSRVPLTSMKAVRLTCKSWNNLSKS---------ESFTKVHIGRAATRE 65

Query: 74  RNLHCVELDPQHLEGMSTV-----ASFTFHPNFS--SGSCKIQIINSCSGLISLLITKRR 133
                V++ P  L  MS V      S  F   FS    + +I  +    GL+ L I K  
Sbjct: 66  EKTMIVDVMPHKLNLMSIVIDDVTPSAEFKGQFSLLHKNYRINQVLHYEGLL-LCIMK-- 125

Query: 134 RRGHRPDVVCVLNPMTNE--YFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFVC- 193
                P  + V NP   +  + +L  F  +   + ++ Y LG+  +     L    F+  
Sbjct: 126 ----DPTRIVVWNPYLGQTRWIQLRYFH-RPHGIDHFRYALGYADKESCSSLKFLRFLDY 185

Query: 194 -------DEFIVDIYAFGTSCEWTPVGSVPYFLNEYHGVY-------FNGGLYWVGAQKL 250
                  + F  +IY F +   WT +   P++     G+Y         G  YW  A++ 
Sbjct: 186 FYKAPEEEFFWYEIYDFDSGL-WTTLNVTPHW-----GIYSTCPCVSLKGNTYW-PAKER 240

BLAST of Clc03G18110 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 6.4e-184
Identity = 308/387 (79.59%), Postives = 336/387 (86.82%), Query Frame = 0

Query: 1   MEKKPNSKIKNTNSELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISD 60
           MEKKP + I N  SELPPDVLQLIFSKLPFFNLPTCRLVS TWNNLI SCKFDPSISIS 
Sbjct: 1   MEKKPKTNIVNKRSELPPDVLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISH 60

Query: 61  FFFAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISLLI 120
            FFA FYS R  NLHCVE DPQH EGMSTVASF FHP+ SSGSC+I IINSCSGLISL+I
Sbjct: 61  LFFARFYSSRHPNLHCVEFDPQHAEGMSTVASFAFHPDLSSGSCRITIINSCSGLISLII 120

Query: 121 TKRRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFV 180
            KRRRRGHR D+VCVLNP+TNEYFKLPT RSKGDRV NY YGLGF+P T  YKLARTHF 
Sbjct: 121 NKRRRRGHRLDLVCVLNPITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHFT 180

Query: 181 CDEFIVDIYAFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVGAQKLPNAGVSDYIDVIY 240
            DEFIVDI+AFGTSCEWTPVGSVP FLNEYHGVY NGGLYWVG+QKLPN G+SDY +VIY
Sbjct: 181 HDEFIVDIFAFGTSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKLPNGGISDYTEVIY 240

Query: 241 RLDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLFCEDFEYHVWKMEEDFSWIKEF 300
           RLDL+DEKFE+ISFPLDGGD+   PYI VYNG+LYLT  CEDF+YH WKMEEDFSW KEF
Sbjct: 241 RLDLKDEKFEKISFPLDGGDD---PYIAVYNGTLYLTFCCEDFDYHAWKMEEDFSWSKEF 300

Query: 301 VLALPENVYSSFRRHHPVEYHLQLIKPCEDGNILCLCAGLQLILYDPKTETMEVLTDQDF 360
           VLALPENV+ S  RHHP+ Y+LQLIK CEDGNILCL AG+ LILYDP T+T+E+LT+QDF
Sbjct: 301 VLALPENVHHSL-RHHPIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILTNQDF 360

Query: 361 EIKKYMWVHQIDSFNFNSLQHILAGNC 388
           EIK+ MWVHQI+SF+FNSL +ILAG C
Sbjct: 361 EIKEAMWVHQIESFSFNSLHNILAGKC 383

BLAST of Clc03G18110 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 1.1e-172
Identity = 287/386 (74.35%), Postives = 325/386 (84.20%), Query Frame = 0

Query: 3   KKPNSKIKNTNSELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISDFF 62
           +KP + I N + ELPPD+LQ IFSK+PFFNLPTCRLVS+TWNNLI SCKFDPS SI   F
Sbjct: 2   EKPKTNIINKSYELPPDILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLF 61

Query: 63  FAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISLLITK 122
           FA FYS R RNLHCVE DPQH+EGMS VASF FHP+F S S +I IINSCSGLISLLITK
Sbjct: 62  FARFYSSRHRNLHCVEFDPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITK 121

Query: 123 RRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFVCD 182
           RRRRG R DVVCVLNP+TNEYFK P  R KGD+V NY YGLGF+P+T  YKLARTHF  +
Sbjct: 122 RRRRGQRRDVVCVLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHN 181

Query: 183 EFIVDIYAFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVGAQK-LPNAGVSDYIDVIYR 242
           EFIVDI+AFGTSCEWTP+GSVP FLNEYHGVYFNGGLYWVG+QK LPN G+SDY  V+YR
Sbjct: 182 EFIVDIFAFGTSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYR 241

Query: 243 LDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLFCEDFEYHVWKMEEDFSWIKEFV 302
           LDL DEKF++IS P  GGDE   PY+GVYNG+LYLTL CEDF+YHVWKM+EDFSW KEFV
Sbjct: 242 LDLNDEKFKKISIPF-GGDE---PYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFV 301

Query: 303 LALPENVYSSFRRHHPVEYHLQLIKPCEDGNILCLCAGLQLILYDPKTETMEVLTDQDFE 362
           LALPEN+  S  RHHP+ Y+LQL+K CEDG+ILCLCAG+ LI+YDPKT+ ME+LTDQDFE
Sbjct: 302 LALPENILHSLHRHHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFE 361

Query: 363 IKKYMWVHQIDSFNFNSLQHILAGNC 388
           IK+ MW HQI+SF+FNSL + L G C
Sbjct: 362 IKEGMWFHQIESFSFNSLHNTLTGKC 383

BLAST of Clc03G18110 vs. ExPASy TrEMBL
Match: A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 1.1e-172
Identity = 287/386 (74.35%), Postives = 325/386 (84.20%), Query Frame = 0

Query: 3   KKPNSKIKNTNSELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISDFF 62
           +KP + I N + ELPPD+LQ IFSK+PFFNLPTCRLVS+TWNNLI SCKFDPS SI   F
Sbjct: 2   EKPKTNIINKSYELPPDILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLF 61

Query: 63  FAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISLLITK 122
           FA FYS R RNLHCVE DPQH+EGMS VASF FHP+F S S +I IINSCSGLISLLITK
Sbjct: 62  FARFYSSRHRNLHCVEFDPQHVEGMSIVASFAFHPDFCSASSRITIINSCSGLISLLITK 121

Query: 123 RRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFVCD 182
           RRRRG R DVVCVLNP+TNEYFK P  R KGD+V NY YGLGF+P+T  YKLARTHF  +
Sbjct: 122 RRRRGQRRDVVCVLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHN 181

Query: 183 EFIVDIYAFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVGAQK-LPNAGVSDYIDVIYR 242
           EFIVDI+AFGTSCEWTP+GSVP FLNEYHGVYFNGGLYWVG+QK LPN G+SDY  V+YR
Sbjct: 182 EFIVDIFAFGTSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQLPNGGLSDYTGVVYR 241

Query: 243 LDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLFCEDFEYHVWKMEEDFSWIKEFV 302
           LDL DEKF++IS P  GGDE   PY+GVYNG+LYLTL CEDF+YHVWKM+EDFSW KEFV
Sbjct: 242 LDLNDEKFKKISIPF-GGDE---PYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFV 301

Query: 303 LALPENVYSSFRRHHPVEYHLQLIKPCEDGNILCLCAGLQLILYDPKTETMEVLTDQDFE 362
           LALPEN+  S  RHHP+ Y+LQL+K CEDG+ILCLCAG+ LI+YDPKT+ ME+LTDQDFE
Sbjct: 302 LALPENILHSLHRHHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFE 361

Query: 363 IKKYMWVHQIDSFNFNSLQHILAGNC 388
           IK+ MW HQI+SF+FNSL + L G C
Sbjct: 362 IKEGMWFHQIESFSFNSLHNTLTGKC 383

BLAST of Clc03G18110 vs. ExPASy TrEMBL
Match: A0A0A0KJY9 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 4.5e-105
Identity = 208/394 (52.79%), Postives = 271/394 (68.78%), Query Frame = 0

Query: 1   MEKKPNSKIKN-TNSELPPD-VLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISI 60
           MEKK   +IK  +NSE PPD ++Q+I SK+P FNL +CRLV K+WNNLIL+CKFDPS+  
Sbjct: 1   MEKKWKGEIKKLSNSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSL-- 60

Query: 61  SDFFFAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISL 120
              F +  Y C  R L+CV+ DP + EGM+++ SFTFHP FS+    I IIN+C+GL+SL
Sbjct: 61  ---FLSFAYDCPSRTLYCVDFDPMYFEGMNSIGSFTFHPKFSTSDSSISIINACNGLLSL 120

Query: 121 LITKRRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRV--QNYFYGLGFNPRTKHYKLAR 180
           LI+K R+ G    V+ +LNPMTNEYFK P  +SK      + Y YGLGFNP+TK YK+AR
Sbjct: 121 LISK-RKLGSVSYVLGILNPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIAR 180

Query: 181 THFVCDE--FIVDIYAFGTSCE-WTPVGSVPYFLNEYHGVYFNGGLYWVGAQKLPNAGVS 240
           T F  DE   +V+I+ FG++ + WTPVG +P  + E HGVYF GGLYWV  Q  P+    
Sbjct: 181 TSFRPDESTTLVEIFTFGSTHQVWTPVGFLPSLVVEDHGVYFKGGLYWVANQPDPH---D 240

Query: 241 DYIDVIYRLDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLFCEDFEYHVWKMEED 300
             I  IYRLDLE+EK E+IS P   G      + GV++G+LYLT+  ++ +Y VWKM+++
Sbjct: 241 SSISAIYRLDLENEKLEKISCPQYIGGHF---FFGVFDGTLYLTV-SKNNKYQVWKMKDN 300

Query: 301 FSWIKEFVLALPENVYSSFRRHHPVEY-HLQLIKPCEDGNILCLCAGLQLILYDPKTETM 360
           FSWIK FV++ P N+      H P     L  IK CEDG ILCL AGL LILYDPKT++ 
Sbjct: 301 FSWIKAFVISRPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSA 360

Query: 361 EVLTDQDFEIKKYMWVHQIDSFNFNSLQHILAGN 387
           E+LTDQ  +++K++ VH ID+FNFNSL  ILAGN
Sbjct: 361 EILTDQSVKVEKHLHVHHIDAFNFNSLPSILAGN 381

BLAST of Clc03G18110 vs. ExPASy TrEMBL
Match: A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 2.9e-104
Identity = 207/394 (52.54%), Postives = 272/394 (69.04%), Query Frame = 0

Query: 1   MEKKPNSKIKN-TNSELPPD-VLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISI 60
           MEKK   +IK  +NSE PPD ++Q+I SK+P FNL +CRLV K+WNNL+L+CKFDPS+  
Sbjct: 1   MEKKWKGEIKKLSNSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLVLTCKFDPSL-- 60

Query: 61  SDFFFAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISL 120
              F +  Y C  R L+CV+ DP + EGM++V SF+FHP FS+ S  I IIN+C+GL+SL
Sbjct: 61  ---FISLAYDCPSRTLYCVDFDPMYSEGMNSVGSFSFHPKFSTSSSSISIINACNGLLSL 120

Query: 121 LITKRRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRV--QNYFYGLGFNPRTKHYKLAR 180
           LI+K R+ G    V+ +LNPMTNEYFK P  +SK      + Y YGLGFNP+ K YK+AR
Sbjct: 121 LISK-RKPGSVSYVLGILNPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIAR 180

Query: 181 THFVCDE--FIVDIYAFGTSCE-WTPVGSVPYFLNEYHGVYFNGGLYWVGAQKLPNAGVS 240
           T F  DE   +V+I+AFG++ + WT VG +P  + E HGVYFNGGLYWV  Q  P+    
Sbjct: 181 TSFRPDESTTLVEIFAFGSTYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPH---D 240

Query: 241 DYIDVIYRLDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLFCEDFEYHVWKMEED 300
             I  IYRLD+E+E  E+IS P   G      + GV++G+LYLT+  ++ +Y VWKM+++
Sbjct: 241 SSISTIYRLDIENENLEKISCPQHLGGHF---FFGVFDGTLYLTV-SKNNKYQVWKMKDN 300

Query: 301 FSWIKEFVLALPENVYSSFRRHHPVEY-HLQLIKPCEDGNILCLCAGLQLILYDPKTETM 360
           FSWIK FV++ P N+      H P     L  IK CEDG ILCL AGL LILYDPKT++ 
Sbjct: 301 FSWIKAFVISSPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSA 360

Query: 361 EVLTDQDFEIKKYMWVHQIDSFNFNSLQHILAGN 387
           E+LTDQ  +++K++ VH IDSFNFNSL +ILAGN
Sbjct: 361 EILTDQSVKVEKHLHVHHIDSFNFNSLPNILAGN 381

BLAST of Clc03G18110 vs. TAIR 10
Match: AT3G21120.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 63.5 bits (153), Expect = 4.2e-10
Identity = 77/319 (24.14%), Postives = 128/319 (40.13%), Query Frame = 0

Query: 16  LPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFD-----------PSISISDFFFA 75
           LP D++  I SK+P  +L   R   + WN L++   F            P + +   F  
Sbjct: 3   LPEDLVLEILSKVPAVSLARFRSTCRRWNALVVDGSFAKKHYAYGPRQYPIVIMLIEFRV 62

Query: 76  HFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINS--CSGLISLLITK 135
           +  S    +LH +  +            F+     S+ S ++ I N+  C GL+ L  TK
Sbjct: 63  YLVSI---DLHGIN-NNNGAPSAKLTGQFSLKDPLSNSSEEVDIRNAFHCDGLL-LCCTK 122

Query: 136 RRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFVCD 195
            RR       + V NP + E       + +    ++  Y LG++ R+  YK+ R H V +
Sbjct: 123 DRR-------LVVWNPCSGE---TKWIQPRNSYKESDLYALGYDNRSSSYKILRMHPVGN 182

Query: 196 EFIV--DIYAFGTSCEWTPVGSVPYF---LNEYHGVYFNGGLYWVGAQKLPNAGVSDYID 255
            F +  ++Y F  S  W  VG    F    NE +G+   G  YW    K  +   SD   
Sbjct: 183 PFHIESEVYDF-ASHSWRSVGVTTDFHIQTNESYGMNVKGTTYWFALSK--DWWSSDDRR 242

Query: 256 VIYRLDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSLYLTLFCEDFEYHVWKMEEDFSWI 315
            +   D   E+F+ +  P D  +   +  + V      L +F      +V+K++   +  
Sbjct: 243 FLLSFDFSRERFQCLPLPADVKNLHLTVVLSVTREEQQLCMFATLGAGNVYKLDVFVATK 301

Query: 316 KEFVLALPENVYSSFRRHH 317
            E      E  ++ FRR H
Sbjct: 303 TEETTG--ELTWTKFRRFH 301

BLAST of Clc03G18110 vs. TAIR 10
Match: AT1G46984.1 (F-box family protein )

HSP 1 Score: 63.2 bits (152), Expect = 5.4e-10
Identity = 60/250 (24.00%), Postives = 105/250 (42.00%), Query Frame = 0

Query: 14  SELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISD-----FFFAHFYS 73
           S LP D++  I S+LP  ++  CRLVSK W +++ S  F  S  I         F   Y 
Sbjct: 22  STLPIDLIIEILSRLPMNSIAICRLVSKQWASILQSSDFTESFLIKSPPRPRLLFTIRYG 81

Query: 74  CRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISLLITKRRRRGH 133
            +       +  P++ +    V +  +H  FS   C +Q     +G I  L  +   +G 
Sbjct: 82  SKWHLFSAPQ--PRNFDENFPVVATDYHKGFSGNWC-MQSFQLVNGFI-YLNNRLSLKGK 141

Query: 134 RPDVVCVLNPMTNEYFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFVCDEFIVDI 193
              V  + NP T +   LP    K    +++F   G++P  K +K+       +  ++ +
Sbjct: 142 IDRVSVIWNPSTGQQIPLPDLGVKNSHSKSFF---GYDPIEKQFKVLCITSSKEHQVLTL 201

Query: 194 YAFGTSCEWTPVG-SVPYF-LNEYHGVYFNGGLYWVGAQKLPNAGVSDYIDVIYRLDLED 253
              G    W  +  S P++   + +G+  NG LY+    +  NA       +I R D+  
Sbjct: 202 -GTGRKLSWRKIEYSYPHYPRKKSNGICINGVLYY----RNTNA-------MIVRFDVRS 252

Query: 254 EKFEQISFPL 257
           E+F  +   +
Sbjct: 262 EEFRFVEIKM 252

BLAST of Clc03G18110 vs. TAIR 10
Match: AT3G22421.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 59.7 bits (143), Expect = 6.0e-09
Identity = 78/326 (23.93%), Postives = 127/326 (38.96%), Query Frame = 0

Query: 12  TNSELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISDFFFAHFYSCRD 71
           T S LP ++L  I S++P  +    RL  K W++L  +  F    + +    +      D
Sbjct: 4   TISHLPTELLDEIISRVPLKSTRAVRLTCKNWDSLFKNRSFMKEEAAAKEGESRMIVLMD 63

Query: 72  RNLHC-------VELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISLLITKRR 131
           +NL         +++DP   +       +       S   KI  +  C GL+  ++   +
Sbjct: 64  KNLFAMSIFFNGIDIDPSAEQRGKLTCLYD-----DSEQVKISQVFHCEGLLLCVLEDDK 123

Query: 132 RRGHRPDVVCVLNPMTNEYFKL-PTFRSKGDRVQN------YFYGLGFNPRTKHYKLART 191
                   + V NP   +   + P + S   R+QN      Y Y LG+N +++ +K+ R 
Sbjct: 124 CS------LVVWNPYWGQTRWIEPRYFS---RIQNCYGRYMYVYALGYNNKSRSHKILR- 183

Query: 192 HFVCD----EFIVDIYAFGTSCEWTPVGSVP-YFLN------EYHGVYFNGGLYWVGAQK 251
            F+       F  +IY F +   WT +   P +F+N         GV   G  YW   ++
Sbjct: 184 -FIDGAFDFPFWYEIYDFDSDL-WTTLDVTPQWFINFPPRGCYNRGVTLKGNTYWCAIRR 243

Query: 252 LPNAGVSDYIDVIYRLDLEDEKFEQISFPLDGGDEGDSPYIGVYNGSL----------YL 299
             N      +D I   D   E+F  +  PL        P++   +GSL            
Sbjct: 244 KSNTNWFVDLDHIICFDFTSERFGPL-MPL--------PFVRYTSGSLVTLSCVREEKLA 303

BLAST of Clc03G18110 vs. TAIR 10
Match: AT2G43260.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 57.0 bits (136), Expect = 3.9e-08
Identity = 78/334 (23.35%), Postives = 131/334 (39.22%), Query Frame = 0

Query: 2   EKKPNSKIKNTNSELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKF---DPSISI 61
           E+ PNS       ++ P++L+ +  +LP  ++  CR+VSK W +L+ S +F     S+  
Sbjct: 5   EENPNS------IDILPELLEEVLLRLPTKSILKCRIVSKQWRSLLESSRFAERHMSLQN 64

Query: 62  SDFFFAHFYSCRDRNLHCVELDPQHLEGMSTVASFTFHPNFSSGSCKIQIINSCSGLISL 121
           S       Y+C D       L     EG   +     H + S  S       +C G+I  
Sbjct: 65  SRRRILAAYNC-DCGGRRKLLPESRFEGDEEIV--YLHCDASRPSM------TCQGVICF 124

Query: 122 LITKRRRRGHRPDVVCVLNPMTNEYFKLPTFRSKGDRVQ----------NYFYGLGFNPR 181
                       D + VLNP T++  + P+  +   R +          N+  G G +  
Sbjct: 125 ---------PEQDWIIVLNPSTSQLRRFPSGLNHNCRFRIGLWKTFSPGNWVMGFGRDKV 184

Query: 182 TKHYKLARTHFVC-----DEFIVDIYAFGTSC-EWTPVGSVPYFLN-EYHGVYFNGGLYW 241
              YK+ R  F       +E +V+         EW  +   PY +N     V  NG +YW
Sbjct: 185 NGRYKVVRMSFAFWRVRQEEPVVECGVLDVDTGEWRKLSPPPYVVNVGSKSVCVNGSIYW 244

Query: 242 VGAQKLPNAGVSDYIDVIYR---LDLEDEKFEQISFPLDGGDEGDSPYIGVYNG-SLYLT 301
           +            +I  +YR   LDL  E+F ++  P       D+  + + +   L +T
Sbjct: 245 L------------HIQTVYRILALDLHKEEFHKVPVP-PTQITVDTQMVNLEDRLVLAIT 301

Query: 302 LFCEDFEYHVWKMEE-DFSWIKEFVLALPENVYS 311
               ++   VW M+     W K + ++L   V S
Sbjct: 305 RVSPEWILEVWGMDTYKEKWSKTYSISLDHRVVS 301

BLAST of Clc03G18110 vs. TAIR 10
Match: AT5G41510.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 49.3 bits (116), Expect = 8.1e-06
Identity = 67/262 (25.57%), Postives = 104/262 (39.69%), Query Frame = 0

Query: 14  SELPPDVLQLIFSKLPFFNLPTCRLVSKTWNNLILSCKFDPSISISDFFFAHF--YSCRD 73
           S LP D+++ IFS++P  ++   RL  K+WNNL  S           F   H    + R+
Sbjct: 6   SNLPRDLIEEIFSRVPLTSMKAVRLTCKSWNNLSKS---------ESFTKVHIGRAATRE 65

Query: 74  RNLHCVELDPQHLEGMSTV-----ASFTFHPNFS--SGSCKIQIINSCSGLISLLITKRR 133
                V++ P  L  MS V      S  F   FS    + +I  +    GL+ L I K  
Sbjct: 66  EKTMIVDVMPHKLNLMSIVIDDVTPSAEFKGQFSLLHKNYRINQVLHYEGLL-LCIMK-- 125

Query: 134 RRGHRPDVVCVLNPMTNE--YFKLPTFRSKGDRVQNYFYGLGFNPRTKHYKLARTHFVC- 193
                P  + V NP   +  + +L  F  +   + ++ Y LG+  +     L    F+  
Sbjct: 126 ----DPTRIVVWNPYLGQTRWIQLRYFH-RPHGIDHFRYALGYADKESCSSLKFLRFLDY 185

Query: 194 -------DEFIVDIYAFGTSCEWTPVGSVPYFLNEYHGVY-------FNGGLYWVGAQKL 250
                  + F  +IY F +   WT +   P++     G+Y         G  YW  A++ 
Sbjct: 186 FYKAPEEEFFWYEIYDFDSGL-WTTLNVTPHW-----GIYSTCPCVSLKGNTYW-PAKER 240

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880514.14.0e-20487.08putative F-box protein At1g46984 [Benincasa hispida][more]
XP_004135796.11.3e-18379.59putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot... [more]
XP_008450717.12.3e-17274.35PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative ... [more]
XP_038883771.11.5e-10754.71putative F-box protein At1g60370 [Benincasa hispida][more]
XP_004134745.19.4e-10552.79F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g0787... [more]
Match NameE-valueIdentityDescription
Q9LJC05.9e-0924.14Putative F-box protein At3g21120 OS=Arabidopsis thaliana OX=3702 GN=At3g21120 PE... [more]
Q9C6277.7e-0924.00Putative F-box protein At1g46984 OS=Arabidopsis thaliana OX=3702 GN=At1g46984 PE... [more]
Q9LUV78.5e-0823.93Putative F-box protein At3g22421 OS=Arabidopsis thaliana OX=3702 GN=At3g22421 PE... [more]
Q8S8Q95.5e-0723.35F-box/LRR-repeat protein At2g43260 OS=Arabidopsis thaliana OX=3702 GN=At2g43260 ... [more]
Q9FFS91.1e-0425.57Putative F-box protein At5g41510 OS=Arabidopsis thaliana OX=3702 GN=At5g41510 PE... [more]
Match NameE-valueIdentityDescription
A0A0A0M1M56.4e-18479.59F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ... [more]
A0A5D3CIX91.1e-17274.35Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
A0A1S3BQV81.1e-17274.35putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV... [more]
A0A0A0KJY94.5e-10552.79F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 ... [more]
A0A5D3CM942.9e-10452.54Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
Match NameE-valueIdentityDescription
AT3G21120.14.2e-1024.14F-box and associated interaction domains-containing protein [more]
AT1G46984.15.4e-1024.00F-box family protein [more]
AT3G22421.16.0e-0923.93F-box and associated interaction domains-containing protein [more]
AT2G43260.13.9e-0823.35F-box and associated interaction domains-containing protein [more]
AT5G41510.18.1e-0625.57F-box and associated interaction domains-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 16..56
e-value: 1.3E-9
score: 48.0
IPR001810F-box domainPFAMPF00646F-boxcoord: 14..57
e-value: 4.9E-12
score: 45.4
IPR001810F-box domainPROSITEPS50181FBOXcoord: 10..66
score: 9.100053
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 110..307
e-value: 9.5E-19
score: 65.6
NoneNo IPR availableGENE3D1.20.1280.50coord: 2..53
e-value: 8.2E-7
score: 30.7
NoneNo IPR availablePANTHERPTHR47993:SF20F-BOX FAMILY PROTEINcoord: 20..323
NoneNo IPR availablePANTHERPTHR47993OS09G0372900 PROTEIN-RELATEDcoord: 20..323
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 14..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc03G18110.1Clc03G18110.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding