Clc03G17890 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G17890
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	transcription factor UNE12-like
Location	ClcChr03: 30243125 .. 30251671 (-)
RNA-Seq Expression	Clc03G17890
Synteny	Clc03G17890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGCCTTTTTCCAATATTTATTTCATTTCCAAACACCCTTTCACAAAGCCATATAAAGTCAGTAAACCAAAAAGCTGAGACCAAAAAGAAAAGCAAAGGAAAGAAAGAAAGAGAGAGCTCCATTTTCCATTATAATTTCTCTCCTCAAAGCACTTTCTTCAAAATCACTTCCCACTTATCGGCTTTCCAATCTGCCACCCATTTCTCCGACACCCTTCCCCTTCCCCAAAAAACCACTTCCATTTTGCTCAAACTTTTCAATTTTATGGCCGGAATCCCCTCTGAGGGGTTGGGGGATGATTTTTTCGAGCAGATTCTGGCGGTGCCGCCGTCTTACGGCGGCGCAGGTGGCGGTGATATGGTGTCTATGCCTATGGGACTACAACTTGGGTCCGGCGGCGGCGGCGGTGGTGGCGGCGGAGGAATGGGTATGCCTTTGGGATTGAATTTAGAACAGGGGTTTTTGAGACAAGAGAGATACAGAGAAGAGCTTGATGGCCACAATAATAATACCACTAATAATGCTTCTTCTTCTTCAACTGCTTCTTCAGGAATCACTGTAATTCTCTCTCTCTCTCTCACTTAAATCCCAAAGTTTTTGGACCAAATTAATGAAAAACTACTTCAAATTGTGTTTTGTGATTTGCTTTTTCTTCATTATTTAAGTGGGAAAAGGGTTTTTTTATACAATTTTTTTTTTTTGGTAGTTTGGACCGGATACCTATTTGGGTTTAATTCAGCTTTGATATTAAACTACTTTTGATTATATTTTGTGTTTGTCTTCTCTCCCAAATGTGATTTAACACTATTTGAAATTCTCTCAGATGAATTTTGTTTGATTAGTTTCATTTCAAAATTAATTAGCAACGAAAGAAATAACTCATTTATTTTATAAAAATTGTGAGATTATCCTTATTTGCTATTATAATTAGAAGAGGCTAAGCTTTGCCATTTTAGGCAAGTTCAGGTTCTTCCTACTAATTATTTATTTATTTATTTTGTGTATTTATTCATGTAAATTAGGGGGGAAAATTAAATCTCAAATGTTTTTTATTTTTTTTAACCAAGGAATAGAATTAGAATGCTGTCTCAGAATCCCAATCTTTTGTTTTCCCTCCTTTCTTGTCAAATCTTTGGCTTCAAAATCACATCCTATAAACTTTCTTTATTTCTTTAAAAAATAAAAAAGGGTTATGATTGAAATTTTTTGTTCTTCTCTAGAGAATATTGGAACGCCAGATGAAAATTTATTCCCATTCAGACATGTGTGTAGTGCAATATTAATATATTGCTTTTTTTCTTTTTCTATTTTATAAATGTATTTTGTCATAATTCTAAAGGGTATTTTGGTCCTTTCCCACCTCCCGTGGTGTTTTCAGGAGAGAGATTCTTCGATGCAGCACATGACAAACTTGTTTCCAACCTTTGGACATTTGCAGACTCAACAACTCCGCCCACCGCCGCCGTTACATCTCCACCAGGTGAGATTACAATTTTGCCCCCTTTTAACTCTCAAAATTCGCTTCTTTTTTCTTAAAGGAAAAGAAAAAAAAAAAAAACTCAAAAGTTATCGTAGGTTGAACTAAGTTCATGTCGATATCTAATTTTCCACTTGAACATAAGTAATGAACGTAAACTTTACTCCACCGTAATTGACACATAACTTCTTTTGTTGAGATCGAAAGTTTAAATTATCATACTTCTATTGGTTGTACTGACTCATTATTTTTTTTTAAAAAAATAAGTTTTCTTAATTCATGGTTTTAAATTTTAATCCTATTTGAAATATTCTTACAAAATTTTTAATACCGTTTGTAGAAGCCAAAGATACTTTAATATAATTATCACATTTTGTCACTCCTATAATATACATTTTCCTTCATCATAGTTGTTAATAACTAGAGGCAAATTGCAAAAACTACCCCTTAAATTATGGTGGTAGTTGCAATTATAGCCTTAAACTTTCAATTGTAAAAATTAAGCATTCAAACTTATATAAATGTTAAAATTAGGTCAAACTAATTGTAACATTTGTATAAATTTAGGTTTCAATTTTAACAATTCATGGGTTTAATTTATATAATTATTGTAAGTTTGGTGATCTAATTTAAACACTTGAAGAAATTTAGGGGTACAATTATCACTTAAAGCTCTACTAGTGATATGTTCTAGAATCTAAATTTATTATAACCTATTAGTTAAAAAATTTTAGTCAATTGGTAATTTAACAACTTCATTTACAAAACATGTTTAAATTAAAATGTATGATGCATAATTGGTAAATGAAAAAAAATTGGAAAAAAAAAGCTCAGGAGATAATTTTGCTATTATTATTATTGTTAAAATACTATTTTTGTCCTTATACCTTGAAGCTTGTTCAATTTTAATCATGTGCTTTCAAATATTCAATTTTAATTCTGTACTTTCAATAAATCTTAAAGTTAGCCCATAAAATTTAATTTTTATCAAAATTGACTAAATGATAGTATATATATACATACTATCATTATAGTATGTATATAGCATAATGAGTCAAAATATTTACAAATATAGAAAATTTCACTGCTATCAAAGATAGATTGAGATAAACTTCTATCGCTAGATAGTGAATTTTTCTATACTTATAAATAGTTTAATATTTTTTTATTTATAATAATTTTCTTAAAAAAAATCAATAATAAACCAGCTCGAATAGTGACCAAAATGGTATTTTAGCATTTATTTATTTATTATTATTATTTTATGAAAAGACAATTTTGTTTTTTTATTTTTTATTAAAGAATGTTAGCATAAGTCAAATAATTATATTTGCTGGGGTACATGTAGATTTTTTTTCAATGTAAATAAGGGATTTTTTTTTTCTCACATGTGATGTTTGTTACTAAATTTCAAAGAAAGTACAAAAACGCGTTTTCAGTATTTAAAATACCAATTTTCCCCTTATATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTCATGAAGCCAAACAGTCCTTATGTTATCTTCATTTCCAAACAAGTCCTTAGAAGTTCAATTTTTCATTTTGTTAGTGTGATACACGCGCTGACTTTTGATTGGTGTTTGCATTTTCTTCCAATTATTGATTGTGATAAGACAAACAAGACATCTTAGACACGTGTGAATGTCTTCGTACGTGCAAGTATTTTATGCCGTTGGATTTTAGAAACCTAAGCATGATCATTCGCTTGCGTCATTTCTTAAGACACGTTCCTTTTATATTTTTCAAAGATGTTTGAGAGCTCATCCACGTGGCTAGACTTTATTGGCTGAAAGCAGGAACCATGTTTTATTCTTTTAAATTAATTTTTATGCTAGTGCTGTTTTTAACTAATGTTAATTATTAATTAATAAAATATATTCATAATGGTCTGTTACCCCACAACAATTTTATTCCTTTGCAATTATTTTTTAAAATTTTTAATTATTATTCGTTGGTCTAAAAATGTGAATGTGGTCAGTAGAACAGTGTGTTTTTTTTTAAATATATAATTTTTATTTTATGATAATATTTTAATTTTTTGTCCCATTATTATGTGTTGGTTTTGGGAACCTTCTAGCCATCTTTAGCTAGATGCCAATATATATAATAACAAAGGAAGAACTTAAATTTTATATATTTTTTTTCATTATTTTAGTGGAATAATTGCAAAATGTGGTACTCACAAATGGAAGAAGACAAATGGGAAATTCATTCATTATATTCTTTTTAGTTAATCTCTTCAAATATTTTGGCAATCCCTCCATAAAAATAAGACAAAAAGAAAGAACAAATCCTTTTTTTTTTTTAATCTTTTTATGGTTAGGATTAAAGAGGGAGAAAAAATGCAATATAGAAAGCACACATCAGCTTTATATTATGTAATTTTTTAAAATTAATTATTATTTTTATGTAGGATGAGAATTGAACCTCTAACCTTGGAGTTAATAGTACACGTTTTATGTCAGTTAAACTATGCTCATTTTGGTATTTGTTCTTTTATCATAGCTTTGTTTTCTACTCGCTAAGATCTAGAGTTCCTCATGATGTTGATTTTGGTATTTTGCATTGTCTAACTCTGACATATGATGATTTGTTTTCTTTTGAATATTCATGTGCAGCCCTTTCACAATCAAACAACTCCCATGACGGTTTCTGCTGTACCACAACCACCTCAAGTTCGACCAAGAGTTCGAGCAAGACGAGGGCAAGCGACCGATCCTCACAGTATTGCAGAAAGGGTAATCTCATCTTTGGACTCTAAGAATAATATAATGTTGATTGAAAAAGAGTGGTTTTTATCATAGAATATCACTTGTATATGATGCATACATATTTTTTTGAAGAGAAAATATTAAGTCCATAGTAGGAAAGAGTGATCTTTTATCACGTGCACGTATTTAAGAGTCCTCGATAGAAATACCTTTTTGAAGTTCATCATAGGTCGTTGCTTGATAATCATTTGGTATGATATTTGTTTGATGATTATATTTTTAGTGTCCTTATACAAATAGAGATACTAGTGCTTAATTATATGCCATGATCTTTTCTTATCTAGCTAACGTGGTACTTTGGTCGTACTGTTTCACTTTTTCAACTTTGAGAAAGGAAAGACCTTCCATAGTGACTTAGCCCGACTAAATCGAGCTTTTCTAGAGGAAATACTAATAAGTGAGGGGCAGGCTACTGATAAGCTTATTAAAGAGGGAGATGCTTTTTTGCAAAAGGTTTTACCCTTGGACTTCTCCCAAGACCATGTGGAAAAATTAGGGAGCTTTTGAGAAGCCCTTAGCAAGGTTATAGATGCTACGATAGCCATAAAGAAAGCCATGAGCTAGAAATTAGGATGATATTTAAAGAGATAAAAAGATCCATGAATTTTGATTGTATTTCCTCTAGAAGTTGTCTTTGATTTTCAAGATTTTTCATTTTAAGTGCTGAGTTGGAAGGAACACACAATATGCCATCCAATTTGATAACATTATTGCTTCATCATCATTTGTTTGGAATGACTTTCAAAGTGTTTTGTAAGACCTTAGAGAGTCAATCAAAGTAAACTTTTATTTGGTTGAAACCAACTGATTGAGCAGAAGTCGGTGATGCTTAAGTTCAAATTTGCATTATCAACCATGAATCCTATATTGTTTGAGGATTTTCCGCCTACAAAGGATATAGTTGACGAGTATCATTCGAACTTGCATTCTCAACAACCAAAATGTTATAACTTTCTCAATATCTCAATTCTTTAAATTCTTTTCAGTGGTCTTGTTCAATGGTATCCCCTCTGTGATTATTAATTGTAGAAAACCTATGAATCATCTTCTAGATGGTAGATATGGTAGATATGGTAGCTAGGGGTATCTCTTACAAATTTCTAGATGGTTTTTCAAAGTTCCAATACCATTACTCTTAGAATGACAAGCCTACTTAACCCCACAATTTTACATTTAGCGTAAGGATAGTAAGGATCACAATTTTTCATTTTCTCAAAATGATCCCAAATTATAGAGGGTTTTAGTATTCTTATGATTTCTGCTTAGACTCAAAGAACCAATGTTAGCTTTGCTTTTTGATTTTACAAATTTGCAAAACCGACACCCACCGACTTCTACATAAAACCAACCGACATTAACCGACCAATGTCGGGTTCAGTCAGTTGGGTTAGTTTTCAACCGTCTTTGTGCACCCTTAATAGTCATGTATCCTAACCTCCTAGAAGGAAAGGCCCATTGAAGACAAACTTAGAGGAGCACTTCTCTTTTCCATGTTAAAAAGTTGTGGCTTTCCTCATAATTCTAAAAAAAGTTATTTAGTGCATCCCTGACTGCATATATCTTTGTAGCCCACCTAAGCATTCAATCACAATTGCCACGTGGCAAACTTTATATATATATATATTCCTCTTTGTGATTGAAGGGGATACATGGAGATCTCATTCTAAAATTGCTATAGATTGAACAAACTCTAAATACTTTTGTCCATTTTCGTATTATCTATATCTCTATGAATCTTAGATCTGTTCGTCTGCGATGAATGCAGTTGCGTCGAGAAAGAATTGCAGAAAGAATGAAGGCCTTGCAGGAGTTAGTTCCTAGTTGCAATAAGGTTGGTTCTACTCAAATACTCTAATTTTATGTTAATGTATGAACTCCAAATTATCTGAACCTTTTCTCCTTGAAGTTCTGCATTATTCCTTTTTCCCAAACATCAATCTAATCTACAGAATTTCAGCCTTAACTGATTCGTTAATTCTTGCAGACTGATCGAGCGGCAATGCTCGATGAAATTGTTGATTATGTAAAGTTTCTTAGGCTTCAAGTTAAGGTACTAAATTTAAAATCCTACAAAAATTTTTGATTTAGTAGAACTTTGCAGTAGAATTTCTGTCATTGAGCTAAAAGTATTGAGGCCCATCTTTCTAATCATAATATGAAGACTATTCTATTCCTATGCACTTCTCATTCCTTGTGTTTTATAACACTATTGAAAATCTTAAACTCATGTTTTATTGGTATTAATTACAATGTCAAACTTGAAATGATTATTGCTAGGTTAGACAGTTTTCTAATATTTTTTGTGCCTATAAGAACAATAAGAGTTCAATTTTTAAAACAAATACCAAAAACTTTTTCTTACAAAAGTCTACCAAGCATGTGCCTAATTTCCATACTTGTTGATTTGTTTCTAAGACACCTCTTATCCCATTTTAATTTGTGTATTTTTCATAGGTTTTAAGCATGAGTAGACTAGGTGGGGCAGGTGCGGTGGCTCAACTTGTGGCCGATGTGCCCCTATCGTCAGTCGAGGTACTAAAAATTTGAGCTTCGTAATAACTTAGTTGTTAATCTTTTAGATATACTATAAATCTTCTCAAACTTCACTTTAACGTTACTTTTATCAAAATACGTCTCTAACTCACTATTGTTTGACATAAGGATTAGCAAAAGACCAAATAAGTGACTATCAAAATGATATTACAAGAATTTGAACATATAACCTCATGTTTTGATAGGCATTTGATCGTATAATCTTTTAAACATATTTTTGACGTTTCTCCTTTTTTTTTTATTTAACATTCTCAGCATTGTTCATCTTTTTTAACGTAGTACTCCTCACTTTAAAGCCTCCTATATATCGAAATTTCTGGTCGTTTTGTTTGCCATTCTCATTTGGGTTTTTGTGTATTTTTAGGGAGAAGGCATTGAGAGTGGCAACAATCAGCATGCATGGGAAAAGTGGTCAAGTGATGGAACAGAGCAACAAGTAGCCAAATTGATGGAAGAAGATGTGGGAGCTGCCATGCAATTCCTACAATCTAAAGCTCTATGCATTATGCCTATCTCATTAGCCTCAGCAATTTTCAGGACACACCAAGCAGATCCACAAATCTTAGTCAAGCCAGAAATGAACACTCCCTAGACCATGGGCCCCGACGACATTGCAATTTGGCACGTGCCCGACTCGTACTCAACCGTGCTAATTTATTCTATCTTTTCTTAATTATGAATATAATCAGTATAATATAATCTAGCCTTTCTAATTTTTCTTGATTTTAAGAGGCATAATCAAGTCAATGCAACTGTTTTAAGCTTGAAAAGTAGTACTTGAAGTGCTTCTTCTTTCCCAAGCTCAAGTTTAGGGAATGTGATTTTCAAAAGCTCAATTGATGTCTCTCTTGTTGTATCAATGGTTGAGTTTAGTGGTAAACAACCAAAATATTTTGAGGAAGATAATTTTGTGAAAAACCCAAACTCAAAAGTCAAAAATAGTTTTTGCCTCACTTTTTAAGAATTTTGCCTCTTGCTTATATCATCATCAACCAAATTTACGAAATTTCCTAGTTTCTTTTTCCCTCTTCTTTTTACTTGTCAATCTTCTCATTTCCATCACCTCTGATTTTTTTTCTTCCTCTCCCTCATCTGCTTCATGGGTTTTGATTTCGACGATTTTGTGTTTCAGAGCAAGAGGGGATCGGTCTACATGAGACAGAAGAAATAGAAAGAGAGAGAGTGAGAGAGGGGGAGACTGAGAGGCCCAACTTGCATGTACAAGGTTTTATTTTGATAATTTTACCTAAATATGAAGTCAAAAAAGAAAGTAGAGCATATTTTCATTTTTCTCCCCATTTTTTGGGTCATCCATCTACTAGACCCATATTTTGAGATGGAAAAGTTTCCACTTTTGTTCCCTTCATTTCTTTACTTGAGAGTGGAGGATGTGGGGCCATTGAAAGAGATAGATGGGGGCATTGTAAATGAAGTACTTTTTTCTTGGGAGGGGGTGGAGAAGTAATAAAAGCAAGATGGAATTAGATAATGGTTGGGTGTGTTGAAAAGCATTGTTGTTGGAAAGTTTTGTTGGCATTTACAAAGTGAGTGTATTCTATGGGAATGATTTTAGTCCTTTTAGTCAAATTTGCTCAATTATTAATATATGGAAAGCTAAAAGAAAGGAAAGGTGTAGGTAGTGGAAGGTGACAATACTAAAAAGATGGTCTTGCTTTTCATCAATAGTAATTGGAAAAATGTTTTTTT

mRNA sequence

ATTGCCTTTTTCCAATATTTATTTCATTTCCAAACACCCTTTCACAAAGCCATATAAAGTCAGTAAACCAAAAAGCTGAGACCAAAAAGAAAAGCAAAGGAAAGAAAGAAAGAGAGAGCTCCATTTTCCATTATAATTTCTCTCCTCAAAGCACTTTCTTCAAAATCACTTCCCACTTATCGGCTTTCCAATCTGCCACCCATTTCTCCGACACCCTTCCCCTTCCCCAAAAAACCACTTCCATTTTGCTCAAACTTTTCAATTTTATGGCCGGAATCCCCTCTGAGGGGTTGGGGGATGATTTTTTCGAGCAGATTCTGGCGGTGCCGCCGTCTTACGGCGGCGCAGGTGGCGGTGATATGGTGTCTATGCCTATGGGACTACAACTTGGGTCCGGCGGCGGCGGCGGTGGTGGCGGCGGAGGAATGGGTATGCCTTTGGGATTGAATTTAGAACAGGGGTTTTTGAGACAAGAGAGATACAGAGAAGAGCTTGATGGCCACAATAATAATACCACTAATAATGCTTCTTCTTCTTCAACTGCTTCTTCAGGAATCACTGAGAGAGATTCTTCGATGCAGCACATGACAAACTTGTTTCCAACCTTTGGACATTTGCAGACTCAACAACTCCGCCCACCGCCGCCGTTACATCTCCACCAGCCCTTTCACAATCAAACAACTCCCATGACGGTTTCTGCTGTACCACAACCACCTCAAGTTCGACCAAGAGTTCGAGCAAGACGAGGGCAAGCGACCGATCCTCACAGTATTGCAGAAAGGTTGCGTCGAGAAAGAATTGCAGAAAGAATGAAGGCCTTGCAGGAGTTAGTTCCTAGTTGCAATAAGACTGATCGAGCGGCAATGCTCGATGAAATTGTTGATTATGTAAAGTTTCTTAGGCTTCAAGTTAAGGTTTTAAGCATGAGTAGACTAGGTGGGGCAGGTGCGGTGGCTCAACTTGTGGCCGATGTGCCCCTATCGTCAGTCGAGGGAGAAGGCATTGAGAGTGGCAACAATCAGCATGCATGGGAAAAGTGGTCAAGTGATGGAACAGAGCAACAAGTAGCCAAATTGATGGAAGAAGATGTGGGAGCTGCCATGCAATTCCTACAATCTAAAGCTCTATGCATTATGCCTATCTCATTAGCCTCAGCAATTTTCAGGACACACCAAGCAGATCCACAAATCTTAGTCAAGCCAGAAATGAACACTCCCTAGACCATGGGCCCCGACGACATTGCAATTTGGCACGTGCCCGACTCGTACTCAACCGTGCTAATTTATTCTATCTTTTCTTAATTATGAATATAATCAGTATAATATAATCTAGCCTTTCTAATTTTTCTTGATTTTAAGAGGCATAATCAAGTCAATGCAACTGTTTTAAGCTTGAAAAGTAGTACTTGAAGTGCTTCTTCTTTCCCAAGCTCAAGTTTAGGGAATGTGATTTTCAAAAGCTCAATTGATGTCTCTCTTGTTGTATCAATGGTTGAGTTTAGTGGTAAACAACCAAAATATTTTGAGGAAGATAATTTTGTGAAAAACCCAAACTCAAAAGTCAAAAATAGTTTTTGCCTCACTTTTTAAGAATTTTGCCTCTTGCTTATATCATCATCAACCAAATTTACGAAATTTCCTAGTTTCTTTTTCCCTCTTCTTTTTACTTGTCAATCTTCTCATTTCCATCACCTCTGATTTTTTTTCTTCCTCTCCCTCATCTGCTTCATGGGTTTTGATTTCGACGATTTTGTGTTTCAGAGCAAGAGGGGATCGGTCTACATGAGACAGAAGAAATAGAAAGAGAGAGAGTGAGAGAGGGGGAGACTGAGAGGCCCAACTTGCATGTACAAGGTTTTATTTTGATAATTTTACCTAAATATGAAGTCAAAAAAGAAAGTAGAGCATATTTTCATTTTTCTCCCCATTTTTTGGGTCATCCATCTACTAGACCCATATTTTGAGATGGAAAAGTTTCCACTTTTGTTCCCTTCATTTCTTTACTTGAGAGTGGAGGATGTGGGGCCATTGAAAGAGATAGATGGGGGCATTGTAAATGAAGTACTTTTTTCTTGGGAGGGGGTGGAGAAGTAATAAAAGCAAGATGGAATTAGATAATGGTTGGGTGTGTTGAAAAGCATTGTTGTTGGAAAGTTTTGTTGGCATTTACAAAGTGAGTGTATTCTATGGGAATGATTTTAGTCCTTTTAGTCAAATTTGCTCAATTATTAATATATGGAAAGCTAAAAGAAAGGAAAGGTGTAGGTAGTGGAAGGTGACAATACTAAAAAGATGGTCTTGCTTTTCATCAATAGTAATTGGAAAAATGTTTTTTT

Coding sequence (CDS)

ATGGCCGGAATCCCCTCTGAGGGGTTGGGGGATGATTTTTTCGAGCAGATTCTGGCGGTGCCGCCGTCTTACGGCGGCGCAGGTGGCGGTGATATGGTGTCTATGCCTATGGGACTACAACTTGGGTCCGGCGGCGGCGGCGGTGGTGGCGGCGGAGGAATGGGTATGCCTTTGGGATTGAATTTAGAACAGGGGTTTTTGAGACAAGAGAGATACAGAGAAGAGCTTGATGGCCACAATAATAATACCACTAATAATGCTTCTTCTTCTTCAACTGCTTCTTCAGGAATCACTGAGAGAGATTCTTCGATGCAGCACATGACAAACTTGTTTCCAACCTTTGGACATTTGCAGACTCAACAACTCCGCCCACCGCCGCCGTTACATCTCCACCAGCCCTTTCACAATCAAACAACTCCCATGACGGTTTCTGCTGTACCACAACCACCTCAAGTTCGACCAAGAGTTCGAGCAAGACGAGGGCAAGCGACCGATCCTCACAGTATTGCAGAAAGGTTGCGTCGAGAAAGAATTGCAGAAAGAATGAAGGCCTTGCAGGAGTTAGTTCCTAGTTGCAATAAGACTGATCGAGCGGCAATGCTCGATGAAATTGTTGATTATGTAAAGTTTCTTAGGCTTCAAGTTAAGGTTTTAAGCATGAGTAGACTAGGTGGGGCAGGTGCGGTGGCTCAACTTGTGGCCGATGTGCCCCTATCGTCAGTCGAGGGAGAAGGCATTGAGAGTGGCAACAATCAGCATGCATGGGAAAAGTGGTCAAGTGATGGAACAGAGCAACAAGTAGCCAAATTGATGGAAGAAGATGTGGGAGCTGCCATGCAATTCCTACAATCTAAAGCTCTATGCATTATGCCTATCTCATTAGCCTCAGCAATTTTCAGGACACACCAAGCAGATCCACAAATCTTAGTCAAGCCAGAAATGAACACTCCCTAG

Protein sequence

MAGIPSEGLGDDFFEQILAVPPSYGGAGGGDMVSMPMGLQLGSGGGGGGGGGGMGMPLGLNLEQGFLRQERYREELDGHNNNTTNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQTQQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRTHQADPQILVKPEMNTP

Homology

[Close]

BLAST of Clc03G17890 vs. NCBI nr
Match: XP_008450747.1 (PREDICTED: transcription factor UNE12-like isoform X1 [Cucumis melo] >TYK10178.1 transcription factor UNE12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 576.6 bits (1485), Expect = 1.3e-160
Identity = 304/318 (95.60%), Postives = 311/318 (97.80%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVPPSYGGAGGGDMVSMPMGLQLGSGGGGGGGGGGMGMPLGL 60
           MAGIPSEGLGDDFFEQ+LAVPPSYGGAGGGDMVS+PMGLQLGSGGGGGG GGGMGMPLGL
Sbjct: 1   MAGIPSEGLGDDFFEQMLAVPPSYGGAGGGDMVSLPMGLQLGSGGGGGGNGGGMGMPLGL 60

Query: 61  NLEQGFLRQERYREELD-GHNNNTTNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT 120
           NLEQGFLRQER+REE+D GHN+N+ NNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT
Sbjct: 61  NLEQGFLRQERFREEVDGGHNSNSNNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT 120

Query: 121 QQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180
           QQLRPPPPLHLHQPFHNQT   TV+AVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA
Sbjct: 121 QQLRPPPPLHLHQPFHNQTNTGTVAAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180

Query: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240
           ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS
Sbjct: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240

Query: 241 SVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300
           SVEGEGIESGNNQ AWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF
Sbjct: 241 SVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300

Query: 301 RTHQADPQILVKPEMNTP 318
           RTHQADPQILVKPEMNTP
Sbjct: 301 RTHQADPQILVKPEMNTP 318

[Close]

BLAST of Clc03G17890 vs. NCBI nr
Match: XP_004135655.1 (transcription factor UNE12 [Cucumis sativus] >KGN66149.1 hypothetical protein Csa_007060 [Cucumis sativus])

HSP 1 Score: 574.3 bits (1479), Expect = 6.4e-160
Identity = 302/318 (94.97%), Postives = 311/318 (97.80%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVPPSYGGAGGGDMVSMPMGLQLGSGGGGGGGGGGMGMPLGL 60
           MAGIPSEGLGDDFFEQ+LAVPPSYGGAGGGDMVS+PMGLQLGSGGGGGG GGGMGMPLGL
Sbjct: 1   MAGIPSEGLGDDFFEQMLAVPPSYGGAGGGDMVSLPMGLQLGSGGGGGGNGGGMGMPLGL 60

Query: 61  NLEQGFLRQERYREELD-GHNNNTTNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT 120
           NLEQGFLRQER+REE+D GHN+N+ NNASSSSTASSGITERDSSMQHMT+LFPTFGHLQT
Sbjct: 61  NLEQGFLRQERFREEVDGGHNSNSNNNASSSSTASSGITERDSSMQHMTSLFPTFGHLQT 120

Query: 121 QQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180
           QQLRPPPPLHLHQPFHNQT   TV+A+PQPPQVRPRVRARRGQATDPHSIAERLRRERIA
Sbjct: 121 QQLRPPPPLHLHQPFHNQTNTGTVAAIPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180

Query: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240
           ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS
Sbjct: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240

Query: 241 SVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300
           SVEGEGIESGNNQ AWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF
Sbjct: 241 SVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300

Query: 301 RTHQADPQILVKPEMNTP 318
           RTHQADPQILVKPEMNTP
Sbjct: 301 RTHQADPQILVKPEMNTP 318

[Close]

BLAST of Clc03G17890 vs. NCBI nr
Match: XP_038880010.1 (transcription factor UNE12-like [Benincasa hispida])

HSP 1 Score: 567.0 bits (1460), Expect = 1.0e-157
Identity = 301/317 (94.95%), Postives = 306/317 (96.53%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVPPSYGGAGGGDMVSMPMGLQLGSGGGGGGGGGGMGMPLGL 60
           MAGIPSEGLGDDFFEQILAVP +YGG GGGDMVSMPMGLQLGS   GGGGGGGMGMPLGL
Sbjct: 1   MAGIPSEGLGDDFFEQILAVPSAYGGGGGGDMVSMPMGLQLGS---GGGGGGGMGMPLGL 60

Query: 61  NLEQGFLRQERYREELDGHNNNTTNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQTQ 120
           NLEQGFLRQER+REE+DGHN    NNASSSSTASSGITERDSSMQHMTNLFPTFGHLQTQ
Sbjct: 61  NLEQGFLRQERFREEIDGHN----NNASSSSTASSGITERDSSMQHMTNLFPTFGHLQTQ 120

Query: 121 QLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIAE 180
           QLRPPPPLHLHQPFHNQTTP TV+AVPQPPQVRPRVRARRGQATDPHSIAERLRRERIAE
Sbjct: 121 QLRPPPPLHLHQPFHNQTTPGTVAAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIAE 180

Query: 181 RMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSS 240
           RMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSS
Sbjct: 181 RMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSS 240

Query: 241 VEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFR 300
           VEGEGIESG+NQ AWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFR
Sbjct: 241 VEGEGIESGSNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFR 300

Query: 301 THQADPQILVKPEMNTP 318
           THQADPQILVKPEMNTP
Sbjct: 301 THQADPQILVKPEMNTP 310

[Close]

BLAST of Clc03G17890 vs. NCBI nr
Match: XP_008450748.1 (PREDICTED: transcription factor UNE12-like isoform X2 [Cucumis melo])

HSP 1 Score: 558.9 bits (1439), Expect = 2.8e-155
Identity = 299/318 (94.03%), Postives = 306/318 (96.23%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVPPSYGGAGGGDMVSMPMGLQLGSGGGGGGGGGGMGMPLGL 60
           MAGIPSEGLGDDFFEQ+LAVPPSYGGAGGGDMVS+PMGLQLGSGGGGGG GGGMGMPLGL
Sbjct: 1   MAGIPSEGLGDDFFEQMLAVPPSYGGAGGGDMVSLPMGLQLGSGGGGGGNGGGMGMPLGL 60

Query: 61  NLEQGFLRQERYREELD-GHNNNTTNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT 120
           NLEQGFLRQER+REE+D GHN+N+ NNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT
Sbjct: 61  NLEQGFLRQERFREEVDGGHNSNSNNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT 120

Query: 121 QQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180
           QQLRPPPPLHLH     QT   TV+AVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA
Sbjct: 121 QQLRPPPPLHLH-----QTNTGTVAAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180

Query: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240
           ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS
Sbjct: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240

Query: 241 SVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300
           SVEGEGIESGNNQ AWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF
Sbjct: 241 SVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300

Query: 301 RTHQADPQILVKPEMNTP 318
           RTHQADPQILVKPEMNTP
Sbjct: 301 RTHQADPQILVKPEMNTP 313

[Close]

BLAST of Clc03G17890 vs. NCBI nr
Match: XP_023530730.1 (transcription factor UNE12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.7 bits (1358), Expect = 6.9e-146
Identity = 290/332 (87.35%), Postives = 301/332 (90.66%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVPPSYGGAGGGDMVSMPMGLQLGSGGG-----------GGG 60
           MAGIPSEGLGDDFFEQILAV P Y G   GD+VS+PMGLQLGSGGG           GGG
Sbjct: 1   MAGIPSEGLGDDFFEQILAVQPGYAGGATGDVVSIPMGLQLGSGGGGDGLRGIAGLQGGG 60

Query: 61  GGGGMGMPLGLNLEQGFLRQERYREEL--DGHNNNTTNNASSSSTASSGITERDSSMQHM 120
           GGGGMGMPLGLNLEQGFLRQER+R+EL  + +NNNTTNNASSSSTASSGITERDSS+QHM
Sbjct: 61  GGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNNNTTNNASSSSTASSGITERDSSVQHM 120

Query: 121 TNLFPTFGHL-QTQQLR-PPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATD 180
             LFP+FGHL QTQQLR PPPPLHLHQPFHNQT P  V+AVPQP Q+RPRVRARRGQATD
Sbjct: 121 NALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQATD 180

Query: 181 PHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGG 240
           PHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGG
Sbjct: 181 PHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGG 240

Query: 241 AGAVAQLVADVPLSSVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSK 300
           AGAVAQLVADVPLSSVEGEGIESG NQ AWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSK
Sbjct: 241 AGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSK 300

Query: 301 ALCIMPISLASAIFRTHQADPQILVKPEMNTP 318
           ALCIMPISLASAIFRTHQADP I+VKPEMNTP
Sbjct: 301 ALCIMPISLASAIFRTHQADPPIMVKPEMNTP 332

[Close]

BLAST of Clc03G17890 vs. ExPASy Swiss-Prot
Match: O22768 (Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2)

HSP 1 Score: 259.2 bits (661), Expect = 6.0e-68
Identity = 188/334 (56.29%), Postives = 210/334 (62.87%), Query Frame = 0


Query: 11  DDFFEQILAVPPSY-----------GGAGGGDMVSMPMGLQLGSGG-----GGGGGGGGM 70
           DDFFEQIL +P              GG GGG   + PM LQLGSG      GG GG G  
Sbjct: 17  DDFFEQILGLPNFSASSAAGLSGVDGGLGGG---APPMMLQLGSGEEGSHMGGLGGSGPT 76

Query: 71  G-----MPLGLNLEQ----GFLRQERYREELDGHNNNTTNNASSSSTASSGITERDSSMQ 130
           G      PLGL+L+Q    GFLR E       GH        S    +   +  R SSM+
Sbjct: 77  GFHNQMFPLGLSLDQGKGPGFLRPE------GGH-------GSGKRFSDDVVDNRCSSMK 136

Query: 131 HMTNLFPTFGHLQTQQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATD 190
                 P F     Q ++ PPP                SA  QP  +RPRVRARRGQATD
Sbjct: 137 ------PVF---HGQPMQQPPP----------------SAPHQPTSIRPRVRARRGQATD 196

Query: 191 PHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGG 250
           PHSIAERLRRERIAER++ALQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLGG
Sbjct: 197 PHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGG 256

Query: 251 AGAVAQLVADVPL-SSVEGEGIESGNN-QHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQ 310
           AGAVA LV D+PL SSVE E  E G   Q AWEKWS+DGTE+QVAKLMEE+VGAAMQ LQ
Sbjct: 257 AGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQ 309

Query: 311 SKALCIMPISLASAIFRTHQADPQILVKPEMNTP 318
           SKALC+MPISLA AI+ +   D   +VKPE N P
Sbjct: 317 SKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 309

[Close]

BLAST of Clc03G17890 vs. ExPASy Swiss-Prot
Match: Q93Y00 (Transcription factor bHLH7 OS=Arabidopsis thaliana OX=3702 GN=BHLH7 PE=1 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 2.9e-62
Identity = 176/326 (53.99%), Postives = 201/326 (61.66%), Query Frame = 0


Query: 11  DDFFEQILAVPPSYGGAGG-----GDMVSMPMGLQLGSGGGGG-------GGGGGMG--- 70
           DDFFEQIL +    G +G      G +   PM LQLGSG  G        GGGG +G   
Sbjct: 19  DDFFEQILGLSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGNHNHMGAIGGGGPVGFHN 78

Query: 71  --MPLGLNLEQGFLRQERYREELDGHNNNTTNNASSSSTASSGITERDSSMQHMTNLFPT 130
              PLGL+L+QG            GH      + +        +  R SSM+      P 
Sbjct: 79  QMFPLGLSLDQG-----------KGH-GFLKPDETGKRFQDDVLDNRCSSMK------PI 138

Query: 131 FGHLQTQQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERL 190
           F      Q  PP P       H Q+T            +RPRVRARRGQATDPHSIAERL
Sbjct: 139 FHGQPMSQPAPPMP-------HQQST------------IRPRVRARRGQATDPHSIAERL 198

Query: 191 RRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLV 250
           RRERIAER+++LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLGGAGAVA LV
Sbjct: 199 RRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV 258

Query: 251 ADVPL-SSVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPI 310
            ++PL SSVE E       Q  WEKWS+DGTE+QVAKLMEE+VGAAMQ LQSKALCIMPI
Sbjct: 259 TEMPLSSSVEDE------TQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPI 301

Query: 311 SLASAIFRTHQAD-PQILVKPEMNTP 318
           SLA AI+ +   D    +VKPEMN P
Sbjct: 319 SLAMAIYHSQPPDTSSSIVKPEMNPP 301

[Close]

BLAST of Clc03G17890 vs. ExPASy Swiss-Prot
Match: Q9ZUG9 (Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.2e-45
Identity = 107/170 (62.94%), Postives = 126/170 (74.12%), Query Frame = 0


Query: 142 TVSAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAML 201
           T   V  PPQ R ++RARRGQATDPHSIAERLRRERIAERMKALQELVP+ NKTD+A+ML
Sbjct: 124 TGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASML 183

Query: 202 DEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEGIESGNNQHAWEKWSS- 261
           DEI+DYVKFL+LQVKVLSMSRLGGA +V+  +++   S         G +Q A     S 
Sbjct: 184 DEIIDYVKFLQLQVKVLSMSRLGGAASVSSQISEAGGSHGNASSAMVGGSQTAGNSNDSV 243

Query: 262 DGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIFRT--HQADPQI 309
             TE QVAKLMEED+G+AMQ+LQ K LC+MPISLA+AI     H  +P I
Sbjct: 244 TMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNPLI 293

[Close]

BLAST of Clc03G17890 vs. ExPASy Swiss-Prot
Match: D0PX88 (bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 7.8e-44
Identity = 121/223 (54.26%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 99  ERDSSMQHMTNLFP-TFGHLQTQQLRPPPPLHLHQPFHNQTTPMTVSAVP---------Q 158
           E  +S+Q + N F  +    Q QQ    PP         Q    T  A P          
Sbjct: 107 EASASVQALYNGFTGSLNGTQPQQHFQHPPQGNSNQIQGQNFGATNQAPPASGSAGGGGN 166

Query: 159 PPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYV 218
             Q +PRVRARRGQATDPHSIAERLRRERIAERMKALQELVP+ NKTD+A+MLDEI+DYV
Sbjct: 167 QGQAKPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYV 226

Query: 219 KFLRLQVKVLSMSRLGGAGAVAQLVADVPLSSVEGEG-------------IESGNNQHAW 278
           KFL+LQVKVLSMSRLGGA AVA LVAD+      G G               S     + 
Sbjct: 227 KFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGGGGGGGDCVTNGAGGVLPRSTTTAAST 286

Query: 279 EKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAI 299
              S   TE QVAKLMEED+G+AMQ+LQ K LC+MPISLA+AI
Sbjct: 287 TNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI 329

[Close]

BLAST of Clc03G17890 vs. ExPASy Swiss-Prot
Match: Q8S3D5 (Transcription factor LRL2 OS=Arabidopsis thaliana OX=3702 GN=LRL2 PE=2 SV=2)

HSP 1 Score: 176.0 bits (445), Expect = 6.6e-43
Identity = 102/179 (56.98%), Postives = 125/179 (69.83%), Query Frame = 0


Query: 127 PLHLHQPFHNQ-------TTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 186
           P HL Q    Q       T   T       PQ +P+VRARRGQATDPHSIAERLRRERIA
Sbjct: 94  PFHLPQGSGGQTQTQSQATASATTGGATAQPQTKPKVRARRGQATDPHSIAERLRRERIA 153

Query: 187 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 246
           ERMK+LQELVP+ NKTD+A+MLDEI+DYVKFL+LQVKVLSMSRLGGA + +  +++    
Sbjct: 154 ERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASASSQISE---- 213

Query: 247 SVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAI 299
                    G++++      +  TE QVAKLMEED+G+AMQ+LQ K LC+MPISLA+ I
Sbjct: 214 ------DAGGSHENTSSSGEAKMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATTI 262

[Close]

BLAST of Clc03G17890 vs. ExPASy TrEMBL
Match: A0A5D3CG28 (Transcription factor UNE12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003230 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 6.2e-161
Identity = 304/318 (95.60%), Postives = 311/318 (97.80%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVPPSYGGAGGGDMVSMPMGLQLGSGGGGGGGGGGMGMPLGL 60
           MAGIPSEGLGDDFFEQ+LAVPPSYGGAGGGDMVS+PMGLQLGSGGGGGG GGGMGMPLGL
Sbjct: 1   MAGIPSEGLGDDFFEQMLAVPPSYGGAGGGDMVSLPMGLQLGSGGGGGGNGGGMGMPLGL 60

Query: 61  NLEQGFLRQERYREELD-GHNNNTTNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT 120
           NLEQGFLRQER+REE+D GHN+N+ NNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT
Sbjct: 61  NLEQGFLRQERFREEVDGGHNSNSNNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT 120

Query: 121 QQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180
           QQLRPPPPLHLHQPFHNQT   TV+AVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA
Sbjct: 121 QQLRPPPPLHLHQPFHNQTNTGTVAAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180

Query: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240
           ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS
Sbjct: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240

Query: 241 SVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300
           SVEGEGIESGNNQ AWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF
Sbjct: 241 SVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300

Query: 301 RTHQADPQILVKPEMNTP 318
           RTHQADPQILVKPEMNTP
Sbjct: 301 RTHQADPQILVKPEMNTP 318

[Close]

BLAST of Clc03G17890 vs. ExPASy TrEMBL
Match: A0A1S3BPY4 (transcription factor UNE12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492234 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 6.2e-161
Identity = 304/318 (95.60%), Postives = 311/318 (97.80%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVPPSYGGAGGGDMVSMPMGLQLGSGGGGGGGGGGMGMPLGL 60
           MAGIPSEGLGDDFFEQ+LAVPPSYGGAGGGDMVS+PMGLQLGSGGGGGG GGGMGMPLGL
Sbjct: 1   MAGIPSEGLGDDFFEQMLAVPPSYGGAGGGDMVSLPMGLQLGSGGGGGGNGGGMGMPLGL 60

Query: 61  NLEQGFLRQERYREELD-GHNNNTTNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT 120
           NLEQGFLRQER+REE+D GHN+N+ NNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT
Sbjct: 61  NLEQGFLRQERFREEVDGGHNSNSNNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT 120

Query: 121 QQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180
           QQLRPPPPLHLHQPFHNQT   TV+AVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA
Sbjct: 121 QQLRPPPPLHLHQPFHNQTNTGTVAAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180

Query: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240
           ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS
Sbjct: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240

Query: 241 SVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300
           SVEGEGIESGNNQ AWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF
Sbjct: 241 SVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300

Query: 301 RTHQADPQILVKPEMNTP 318
           RTHQADPQILVKPEMNTP
Sbjct: 301 RTHQADPQILVKPEMNTP 318

[Close]

BLAST of Clc03G17890 vs. ExPASy TrEMBL
Match: A0A0A0LYN0 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G573680 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.1e-160
Identity = 302/318 (94.97%), Postives = 311/318 (97.80%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVPPSYGGAGGGDMVSMPMGLQLGSGGGGGGGGGGMGMPLGL 60
           MAGIPSEGLGDDFFEQ+LAVPPSYGGAGGGDMVS+PMGLQLGSGGGGGG GGGMGMPLGL
Sbjct: 1   MAGIPSEGLGDDFFEQMLAVPPSYGGAGGGDMVSLPMGLQLGSGGGGGGNGGGMGMPLGL 60

Query: 61  NLEQGFLRQERYREELD-GHNNNTTNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT 120
           NLEQGFLRQER+REE+D GHN+N+ NNASSSSTASSGITERDSSMQHMT+LFPTFGHLQT
Sbjct: 61  NLEQGFLRQERFREEVDGGHNSNSNNNASSSSTASSGITERDSSMQHMTSLFPTFGHLQT 120

Query: 121 QQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180
           QQLRPPPPLHLHQPFHNQT   TV+A+PQPPQVRPRVRARRGQATDPHSIAERLRRERIA
Sbjct: 121 QQLRPPPPLHLHQPFHNQTNTGTVAAIPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180

Query: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240
           ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS
Sbjct: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240

Query: 241 SVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300
           SVEGEGIESGNNQ AWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF
Sbjct: 241 SVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300

Query: 301 RTHQADPQILVKPEMNTP 318
           RTHQADPQILVKPEMNTP
Sbjct: 301 RTHQADPQILVKPEMNTP 318

[Close]

BLAST of Clc03G17890 vs. ExPASy TrEMBL
Match: A0A1S3BPW1 (transcription factor UNE12-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492234 PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.3e-155
Identity = 299/318 (94.03%), Postives = 306/318 (96.23%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVPPSYGGAGGGDMVSMPMGLQLGSGGGGGGGGGGMGMPLGL 60
           MAGIPSEGLGDDFFEQ+LAVPPSYGGAGGGDMVS+PMGLQLGSGGGGGG GGGMGMPLGL
Sbjct: 1   MAGIPSEGLGDDFFEQMLAVPPSYGGAGGGDMVSLPMGLQLGSGGGGGGNGGGMGMPLGL 60

Query: 61  NLEQGFLRQERYREELD-GHNNNTTNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT 120
           NLEQGFLRQER+REE+D GHN+N+ NNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT
Sbjct: 61  NLEQGFLRQERFREEVDGGHNSNSNNNASSSSTASSGITERDSSMQHMTNLFPTFGHLQT 120

Query: 121 QQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180
           QQLRPPPPLHLH     QT   TV+AVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA
Sbjct: 121 QQLRPPPPLHLH-----QTNTGTVAAVPQPPQVRPRVRARRGQATDPHSIAERLRRERIA 180

Query: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240
           ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS
Sbjct: 181 ERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLVADVPLS 240

Query: 241 SVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300
           SVEGEGIESGNNQ AWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF
Sbjct: 241 SVEGEGIESGNNQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPISLASAIF 300

Query: 301 RTHQADPQILVKPEMNTP 318
           RTHQADPQILVKPEMNTP
Sbjct: 301 RTHQADPQILVKPEMNTP 313

[Close]

BLAST of Clc03G17890 vs. ExPASy TrEMBL
Match: A0A6J1HMZ7 (transcription factor UNE12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465659 PE=4 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 3.7e-145
Identity = 289/335 (86.27%), Postives = 300/335 (89.55%), Query Frame = 0


Query: 1   MAGIPSEGLGDDFFEQILAVPPSYGGAGGGDMVSMPMGLQLGSGGG-------------G 60
           MAGIPSEGLGDDFFEQILAV P Y     GD+VS+PMGLQLGSGGG             G
Sbjct: 1   MAGIPSEGLGDDFFEQILAVQPGYAAGATGDVVSIPMGLQLGSGGGGGGDGLRGIAGLQG 60

Query: 61  GGGGGGMGMPLGLNLEQGFLRQERYREELDGHN---NNTTNNASSSSTASSGITERDSSM 120
           GGGGGGMGMPLGLNLEQGFLRQER+R+EL+ +N   NNTTNNASSSSTASSGITERDSS+
Sbjct: 61  GGGGGGMGMPLGLNLEQGFLRQERFRDELNNNNNNSNNTTNNASSSSTASSGITERDSSV 120

Query: 121 QHMTNLFPTFGHL-QTQQLR-PPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQ 180
           QHM  LFP+FGHL QTQQLR PPPPLHLHQPFHNQT P  V+AVPQP Q+RPRVRARRGQ
Sbjct: 121 QHMNALFPSFGHLQQTQQLRPPPPPLHLHQPFHNQTNPGMVAAVPQPSQIRPRVRARRGQ 180

Query: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240
           ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR
Sbjct: 181 ATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSR 240

Query: 241 LGGAGAVAQLVADVPLSSVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300
           LGGAGAVAQLVADVPLSSVEGEGIESG NQ AWEKWSSDGTEQQVAKLMEEDVGAAMQFL
Sbjct: 241 LGGAGAVAQLVADVPLSSVEGEGIESGANQQAWEKWSSDGTEQQVAKLMEEDVGAAMQFL 300

Query: 301 QSKALCIMPISLASAIFRTHQADPQILVKPEMNTP 318
           QSKALCIMPISLASAIFRTHQADP I+VKPEMNTP
Sbjct: 301 QSKALCIMPISLASAIFRTHQADPPIMVKPEMNTP 335

[Close]

BLAST of Clc03G17890 vs. TAIR 10
Match: AT4G02590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 259.2 bits (661), Expect = 4.2e-69
Identity = 188/334 (56.29%), Postives = 210/334 (62.87%), Query Frame = 0


Query: 11  DDFFEQILAVPPSY-----------GGAGGGDMVSMPMGLQLGSGG-----GGGGGGGGM 70
           DDFFEQIL +P              GG GGG   + PM LQLGSG      GG GG G  
Sbjct: 17  DDFFEQILGLPNFSASSAAGLSGVDGGLGGG---APPMMLQLGSGEEGSHMGGLGGSGPT 76

Query: 71  G-----MPLGLNLEQ----GFLRQERYREELDGHNNNTTNNASSSSTASSGITERDSSMQ 130
           G      PLGL+L+Q    GFLR E       GH        S    +   +  R SSM+
Sbjct: 77  GFHNQMFPLGLSLDQGKGPGFLRPE------GGH-------GSGKRFSDDVVDNRCSSMK 136

Query: 131 HMTNLFPTFGHLQTQQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATD 190
                 P F     Q ++ PPP                SA  QP  +RPRVRARRGQATD
Sbjct: 137 ------PVF---HGQPMQQPPP----------------SAPHQPTSIRPRVRARRGQATD 196

Query: 191 PHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGG 250
           PHSIAERLRRERIAER++ALQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLGG
Sbjct: 197 PHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGG 256

Query: 251 AGAVAQLVADVPL-SSVEGEGIESGNN-QHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQ 310
           AGAVA LV D+PL SSVE E  E G   Q AWEKWS+DGTE+QVAKLMEE+VGAAMQ LQ
Sbjct: 257 AGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQ 309

Query: 311 SKALCIMPISLASAIFRTHQADPQILVKPEMNTP 318
           SKALC+MPISLA AI+ +   D   +VKPE N P
Sbjct: 317 SKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 309

[Close]

BLAST of Clc03G17890 vs. TAIR 10
Match: AT4G02590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 259.2 bits (661), Expect = 4.2e-69
Identity = 188/334 (56.29%), Postives = 210/334 (62.87%), Query Frame = 0


Query: 11  DDFFEQILAVPPSY-----------GGAGGGDMVSMPMGLQLGSGG-----GGGGGGGGM 70
           DDFFEQIL +P              GG GGG   + PM LQLGSG      GG GG G  
Sbjct: 17  DDFFEQILGLPNFSASSAAGLSGVDGGLGGG---APPMMLQLGSGEEGSHMGGLGGSGPT 76

Query: 71  G-----MPLGLNLEQ----GFLRQERYREELDGHNNNTTNNASSSSTASSGITERDSSMQ 130
           G      PLGL+L+Q    GFLR E       GH        S    +   +  R SSM+
Sbjct: 77  GFHNQMFPLGLSLDQGKGPGFLRPE------GGH-------GSGKRFSDDVVDNRCSSMK 136

Query: 131 HMTNLFPTFGHLQTQQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATD 190
                 P F     Q ++ PPP                SA  QP  +RPRVRARRGQATD
Sbjct: 137 ------PVF---HGQPMQQPPP----------------SAPHQPTSIRPRVRARRGQATD 196

Query: 191 PHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGG 250
           PHSIAERLRRERIAER++ALQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLGG
Sbjct: 197 PHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGG 256

Query: 251 AGAVAQLVADVPL-SSVEGEGIESGNN-QHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQ 310
           AGAVA LV D+PL SSVE E  E G   Q AWEKWS+DGTE+QVAKLMEE+VGAAMQ LQ
Sbjct: 257 AGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDGTERQVAKLMEENVGAAMQLLQ 309

Query: 311 SKALCIMPISLASAIFRTHQADPQILVKPEMNTP 318
           SKALC+MPISLA AI+ +   D   +VKPE N P
Sbjct: 317 SKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 309

[Close]

BLAST of Clc03G17890 vs. TAIR 10
Match: AT4G02590.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-63
Identity = 165/282 (58.51%), Postives = 185/282 (65.60%), Query Frame = 0


Query: 42  GSGGGGGGGGGGMGMPLGLNLEQ----GFLRQERYREELDGHNNNTTNNASSSSTASSGI 101
           G GG G  G      PLGL+L+Q    GFLR E       GH        S    +   +
Sbjct: 3   GLGGSGPTGFHNQMFPLGLSLDQGKGPGFLRPE------GGH-------GSGKRFSDDVV 62

Query: 102 TERDSSMQHMTNLFPTFGHLQTQQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVR 161
             R SSM+      P F     Q ++ PPP                SA  QP  +RPRVR
Sbjct: 63  DNRCSSMK------PVF---HGQPMQQPPP----------------SAPHQPTSIRPRVR 122

Query: 162 ARRGQATDPHSIAERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKV 221
           ARRGQATDPHSIAERLRRERIAER++ALQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKV
Sbjct: 123 ARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKV 182

Query: 222 LSMSRLGGAGAVAQLVADVPL-SSVEGEGIESGNN-QHAWEKWSSDGTEQQVAKLMEEDV 281
           LSMSRLGGAGAVA LV D+PL SSVE E  E G   Q AWEKWS+DGTE+QVAKLMEE+V
Sbjct: 183 LSMSRLGGAGAVAPLVTDMPLSSSVEDETGEGGRTPQPAWEKWSNDGTERQVAKLMEENV 242

Query: 282 GAAMQFLQSKALCIMPISLASAIFRTHQADPQILVKPEMNTP 318
           GAAMQ LQSKALC+MPISLA AI+ +   D   +VKPE N P
Sbjct: 243 GAAMQLLQSKALCMMPISLAMAIYHSQPPDTSSVVKPENNPP 246

[Close]

BLAST of Clc03G17890 vs. TAIR 10
Match: AT1G03040.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 240.4 bits (612), Expect = 2.0e-63
Identity = 176/326 (53.99%), Postives = 201/326 (61.66%), Query Frame = 0


Query: 11  DDFFEQILAVPPSYGGAGG-----GDMVSMPMGLQLGSGGGGG-------GGGGGMG--- 70
           DDFFEQIL +    G +G      G +   PM LQLGSG  G        GGGG +G   
Sbjct: 19  DDFFEQILGLSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGNHNHMGAIGGGGPVGFHN 78

Query: 71  --MPLGLNLEQGFLRQERYREELDGHNNNTTNNASSSSTASSGITERDSSMQHMTNLFPT 130
              PLGL+L+QG            GH      + +        +  R SSM+      P 
Sbjct: 79  QMFPLGLSLDQG-----------KGH-GFLKPDETGKRFQDDVLDNRCSSMK------PI 138

Query: 131 FGHLQTQQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSIAERL 190
           F      Q  PP P       H Q+T            +RPRVRARRGQATDPHSIAERL
Sbjct: 139 FHGQPMSQPAPPMP-------HQQST------------IRPRVRARRGQATDPHSIAERL 198

Query: 191 RRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAQLV 250
           RRERIAER+++LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLGGAGAVA LV
Sbjct: 199 RRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLV 258

Query: 251 ADVPL-SSVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALCIMPI 310
            ++PL SSVE E       Q  WEKWS+DGTE+QVAKLMEE+VGAAMQ LQSKALCIMPI
Sbjct: 259 TEMPLSSSVEDE------TQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALCIMPI 301

Query: 311 SLASAIFRTHQAD-PQILVKPEMNTP 318
           SLA AI+ +   D    +VKPEMN P
Sbjct: 319 SLAMAIYHSQPPDTSSSIVKPEMNPP 301

[Close]

BLAST of Clc03G17890 vs. TAIR 10
Match: AT1G03040.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 239.6 bits (610), Expect = 3.5e-63
Identity = 172/330 (52.12%), Postives = 203/330 (61.52%), Query Frame = 0


Query: 11  DDFFEQILAVPPSYGGAGG-----GDMVSMPMGLQLGSGGGGG-------GGGGGMG--- 70
           DDFFEQIL +    G +G      G +   PM LQLGSG  G        GGGG +G   
Sbjct: 19  DDFFEQILGLSNFSGSSGSGLSGIGGVGPPPMMLQLGSGNEGNHNHMGAIGGGGPVGFHN 78

Query: 71  --MPLGLNLEQ----GFLRQERYREELDGHNNNTTNNASSSSTASSGITERDSSMQHMTN 130
              PLGL+L+Q    GFL+ +   +      ++  +N  SS                   
Sbjct: 79  QMFPLGLSLDQGKGHGFLKPDETGKRF---QDDVLDNRCSS------------------- 138

Query: 131 LFPTFGHLQTQQLRPPPPLHLHQPFHNQTTPMTVSAVPQPPQVRPRVRARRGQATDPHSI 190
                  ++    +P PP+      H Q+T            +RPRVRARRGQATDPHSI
Sbjct: 139 -------MKPPMSQPAPPMP-----HQQST------------IRPRVRARRGQATDPHSI 198

Query: 191 AERLRRERIAERMKALQELVPSCNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAV 250
           AERLRRERIAER+++LQELVP+ NKTDRAAM+DEIVDYVKFLRLQVKVLSMSRLGGAGAV
Sbjct: 199 AERLRRERIAERIRSLQELVPTVNKTDRAAMIDEIVDYVKFLRLQVKVLSMSRLGGAGAV 258

Query: 251 AQLVADVPL-SSVEGEGIESGNNQHAWEKWSSDGTEQQVAKLMEEDVGAAMQFLQSKALC 310
           A LV ++PL SSVE E       Q  WEKWS+DGTE+QVAKLMEE+VGAAMQ LQSKALC
Sbjct: 259 APLVTEMPLSSSVEDE------TQAVWEKWSNDGTERQVAKLMEENVGAAMQLLQSKALC 296

Query: 311 IMPISLASAIFRTHQAD-PQILVKPEMNTP 318
           IMPISLA AI+ +   D    +VKPEMN P
Sbjct: 319 IMPISLAMAIYHSQPPDTSSSIVKPEMNPP 296

The following BLAST results are available for this feature:

BLAST of Clc03G17890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450747.1	1.3e-160	95.60	PREDICTED: transcription factor UNE12-like isoform X1 [Cucumis melo] >TYK10178.1...	[more]
XP_004135655.1	6.4e-160	94.97	transcription factor UNE12 [Cucumis sativus] >KGN66149.1 hypothetical protein Cs...	[more]
XP_038880010.1	1.0e-157	94.95	transcription factor UNE12-like [Benincasa hispida]	[more]
XP_008450748.1	2.8e-155	94.03	PREDICTED: transcription factor UNE12-like isoform X2 [Cucumis melo]	[more]
XP_023530730.1	6.9e-146	87.35	transcription factor UNE12-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc03G17890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22768	6.0e-68	56.29	Transcription factor UNE12 OS=Arabidopsis thaliana OX=3702 GN=UNE12 PE=1 SV=2	[more]
Q93Y00	2.9e-62	53.99	Transcription factor bHLH7 OS=Arabidopsis thaliana OX=3702 GN=BHLH7 PE=1 SV=1	[more]
Q9ZUG9	4.2e-45	62.94	Transcription factor LRL1 OS=Arabidopsis thaliana OX=3702 GN=LRL1 PE=1 SV=1	[more]
D0PX88	7.8e-44	54.26	bHLH transcription factor RHL1 OS=Lotus japonicus OX=34305 GN=RHL1 PE=2 SV=1	[more]
Q8S3D5	6.6e-43	56.98	Transcription factor LRL2 OS=Arabidopsis thaliana OX=3702 GN=LRL2 PE=2 SV=2	[more]

BLAST of Clc03G17890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CG28	6.2e-161	95.60	Transcription factor UNE12-like isoform X1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3BPY4	6.2e-161	95.60	transcription factor UNE12-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]
A0A0A0LYN0	3.1e-160	94.97	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G573680 PE=4 S...	[more]
A0A1S3BPW1	1.3e-155	94.03	transcription factor UNE12-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034922...	[more]
A0A6J1HMZ7	3.7e-145	86.27	transcription factor UNE12-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Clc03G17890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02590.1	4.2e-69	56.29	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G02590.2	4.2e-69	56.29	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G02590.3	1.6e-63	58.51	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G03040.1	2.0e-63	53.99	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G03040.2	3.5e-63	52.12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 168..217 e-value: 6.6E-12 score: 55.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 167..211 e-value: 6.8E-8 score: 32.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 162..211 score: 16.526237
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 155..212 e-value: 3.1E-14 score: 54.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 160..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..99
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 7..306
None	No IPR available	PANTHER	PTHR16223:SF198	DEHYDROGENASE, PUTATIVE, EXPRESSED-RELATED	coord: 7..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G17890.1	Clc03G17890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding