Clc03G17780 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G17780
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Leucine-rich receptor-like protein kinase family protein
Location	ClcChr03: 30145822 .. 30154427 (+)
RNA-Seq Expression	Clc03G17780
Synteny	Clc03G17780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGGCCTAGGTTGGTGACCTCCATTGCACTTACCGGAGGGGTGCCCGCCTAAGGTCTGCCCAAAGCGGCGGAGCCTACGTCATAATTTGTGGTAGTGGGGGCCTGCGTTCGCGCGGCCCCTGTGAATTCACTAGTGCAAGTTCTTTCATTTTCCAGGTATTTACATTCTGAAAATTCTCGTCGTTTCTATGCCCCTTTGATTTAATAAGATTGTGATTCCTTAAATTATATGGATATTGTTATTATTTGTCTCTTGAAGGTTTTATATTGCGTTGAGGTGTAAGATTTGAGCCAAATGCCTGTACGTTTTGGTTAAGGGTTTGAACAATATCTAATATGTATTTGAGCAAATAGATATTGTTATTATCTGTCTCTTGGAGTTTTGATACTGCGTTGAGTTGTTGTGCAAAGGCTGTTCGTTTGACGAATGGGCGAGTGATTTGAGCTATAAATAACACGGGTTGAGGGAAATCAGTTTGTTCTTTCAATCCAATTTGTGACTGGGTTATCATCTCAGTGGAACTCCTATGATTTAAGTGGTTTTTTCTGTTGTGTTCTTTTTTCATTTGTCTTGATTTCTGGTTAATGAGAAGGAAGTGACGGATATATATAGAGCGAGTATCGTATCGTGGGGGTTTATTAGGGAGGGAGGGAGGGAAAATTGTTGGAGGTGTGTCTAAGACCGGTGTCTATAGTTTCATCGAGTGATGTTGATGGACTTTTAGATTTGAAACTGAAGAGAATAGAAATTGCTTTCAACTAGGAAAGGGCCCCATGATGTCGCTTTGGGGAGAACAGGTTAAAGGATTAGTGCCTAGGTATAACGAAGAGAGAGGAATATTGTTTGAAGGATCATAGCACTAACCTTGAAATTCTCTCTTAATTAGTCCTACTATGACATTAGATCACTAGATCACTAACTCCTAAATAAAAGCCAATGGCATTGGTATTTAAGGAACAATTAATTCAATTTACTTGCCAATTAAGTTTGTACTATCTTTTAACGAAGGATAGTTACATAAACATTCCATTTGATGAGTTGGAAGTTATAATTGTGGGCTGTATTATTTATGGTATCTGTGAATGACCCTTGATGAGTTAAAATGGAAGCTAACATTTCCGTTGGTCACTGCTTTCAGAAACATAATTTCGAGGCTGTTTTACCATTGTACCTAAGAGATGCAAATCATTGTAAGCGCAATGGGCACCAATGGGCTTTATCTTTTAAGGTTCCTGGTTCTAGTTTGGTCGACCTCTTATAATAGTCATTGAAATCAACTGAACCTGAAATTACTTTTGAATGTTCTCGTTTGTTGTAATATTATTCTTGTGATCTGAAGCTCCAGAGTCGAAGCATGATAAGTTCCATTCATTTGGGTTTTTGAGGCTCGACACTGATTCACATATTTGAAAGAAACTTCATTTGCTCCTTGCTAGCTACTAAAGGGTTTTCGCTCCATTTGATGAATATTTTCGAATCACTGTGCTTGATGTGCTCGATCTTTCTCTCTTAGTATCCCGTCTTCTTGCAGAGTTCACAAAAATGTTCACCTTTTCTTGTCTTTTGTTTGGCTTATTTAGACTTATAGTTACAAGAGCGGAGTAGTCCAACTTTGATGGCCAAGCATTAGCTTTCTTAGACTTTCTCCCTTTTGAACTTCTGCAAAAGGTTCAGGAATAGTTGTGAAGGTTAATATCCTTCCCTTGATTTCTATGACGTTCTCACTAAGATCTAAAATGGTGGAATTATAAGAAGCGTGAAACGAACAGGAACAGACGTGCCTAAAATTTGCTCAATATCCAAGCTGTTTAAATCCTCTTAAGCTAAGAAGCCAGATCCCTCAACCTTTTGCATCTAGCTTGACGCCACAGGGGGTCTACATGCTTAATCAAGGCGAGTGGAATTACTATCAGAAGCTTCCTTGTGGGCGTCAAATCTCATTCCTGATTGATCCTTAATTGAGACGATATCTATTTTCTTTAATTGAATACGTGAAAGACTTGGTATTATAGTAGCTAATGAAAGTTTTATATTCTAACAGTTTGTGGGATTTTCACTCCAAAAGGATTACATCTGGTAATTCAAAATTAGTTCATCTAGATTTGCAGATTCTATTGCATCTTTTCCCCTTCGTCTTCTTCCTTCTCTTAAGCAAGCAACATTTCTCTAAATCTAGAAACATGTAGAAAATCTTATGGTAGAGGACAAATTCTAGTTTCATGGAAGACTACTAAAAGTGGCATTGACAAAATAAGAGGAACGATTAAAAAATCCTGTCTGCCTCTTTACTCTAATTCAAATGCTGAAAGAACAAAAATGGCTAGGATTTCACTAACAATTCCTAGATTCGCTCAATTGACATAAAGTTGTATTATGATAAAGTTCGCTCAATTGACATAAATTATATTATGATAAAGTTGTATTATGGGAGGTTTGATTTTCTAACTCCACATATTGTCATTCTAGAAAAAATCCAATCCAATATAGGTCTATTATACTATAGAAAAATATTACAATTGGCTTCTCAAAAATATACCTGCCCGATCAACCTCCTTACCCCTTATATTTAAAAGAGAACTCCCATAATTTAATAAATTACCATACGAATTACAATATGCCGCTAATAATACTCTTAATATAGCTTGATCATAGGTCTTGACTCCCAATCCTTCATCATAAAGTATCTTTGTGAAGGCTTGTGCAATCAATTTATGTACATCTTCTTTTGGAGGGACATGGGGAATTAAGACAACAGTTTCTTGGAGTTGAATGATTTTTTGTGGTTCCTCTTGGCATATATACTCATGCATCTAATGTTCTTACAATGCAGAGTGATGTTTAAAGCTTTGGGATGATTCTATGTGAACTTCGAAGTAGATCCAGTAGTGGTGTCGGGTGCGGATAATTTTGAAAACATGGCTAAATGAAGTTTGAATGTTGATGTCGATGAGAATATTGAAGTGCCAATTTTGCATAAAGATGGAATTCAAAGAGAAGAAAAAAGTATAAAATTTTGTATAAAGAAGACGCTCAATCTTTACTAAGTGTTAAATACAAAGCATGACTGATATTGTTGATGAAGACAAAAGAGTTGCATTTATGAATGACGATCAATGACAACTGCAAATAGAAGAACAACAGTAAAGATAACAAGCTCGAGTTGATTGCTTCAAAAGTTTACTTCAAGCTCGACCACCTAGTTGCAACATTTGAAGGACTGCTATTGACTTGTCGGAGGTCTTTGTAATCAAATAATATTTATAATTACAGATCAAGATCGAGTTGATTTGCAAGAAAGCACGAAGATTAGTTTCTCAAAGTTAATTCTTTAGTTAAACCGGTTAATGAGGAGGTTGTATTTGAATTGGATGATGAGACAAAAGAGCTAAATAAAAGGCGTTGTTCCTTTGGAAGGTAAACAAAGAAGATGCCTTTAGTTAAAGGAAGAAGAATTCTCCAAATTGTAGGTATGGTCATGGAGTATTGCTCAATCTGTTCAAACACATAGCCTACTTAACTGGTAATGTTGCACTAAGCGTTCTTAATTATTAACTAAGACCTAATCCTAATTAAACTATATGCCAATTAATCAAGAATGAAACACACCCAAGTATTAATCTAAACATATGCATTTAGTTCTATGGTTAAGCCATGATGATTGGTTTACAATAATGCCAATTAACTAATCGATATCTCTTTATCCCTAAGCCACTTATGACAACTATGTGACATTTTCGGTAATGTCGTGAAAAGTCACGTAGCCATGAGATGACTGTAGCTACTTTGGTAACTAACACTTATTACATATTATATGTTAAATTTTTAGCAATTAGCATGCATAAACAATTTAGTTTATCTCTCCAAACTATTCAACATACTAAAGAGTAAGTTCAAGAGATAAAGATGTTGAGAGAGAGAAATATTTACATTTAAAATCAAATCCTCACATAATCACAAAGAGAGTTCATCAAAATCCAATAACTAAACAAAACTAACGAAGATTACATACCTTAGAGAAATAATCAAGGCTCGTAAACCTCGAGTCGTTTACAATCCAAAAGATCCAACCAAAAACTAAAGAAAAGAGATTAAGAATGAAGAAAAACAAGGAAACTCCATAGCTCACAGGGGAAACTTCCCCTACTTTTTGCATAATCCAAAATTTTAGAAAACTTCTATTTATAGAGGTTAGGTTGCCTATAACACCGCGACGCTTATGGCCTTTAGTTCCAGTGCCACAACCTTCAATCTTTCTGCCTTCGGCGTCGCGACCTTGTTCCCTCCTTGGTCATTCTCGTCCATTTGCACTCTTTTGCCTCATTTTGACTTGTTTTGCATTTGGAACGATGACTTCCTTTGCTCAATTCCCTATCTAAGGACACAATTAAATATTAAATTCCTAAGAACTAATCTGATTTAGATCAGGAAAGATAACCCTTTTAAGGAGTTATTAGAACTTGAGAAAATCTATGGATTAAAAAAACGAGAGCTGAGTTTTCATTATGCAACTTGAGAAATTTTTTTTATAAACATTTTTGTTTTGATTTTTCATTTTTTTTAAAATTAAACTTATAAACATTGTTTTTATTTGTATTTTCTTTAATTTGTTAATTTTGTTATCTAGCATCAATAAAAACTTCAAAAACTTAAAAATGTGTTTTTGTGTCTGTAATTTGAACAAAAATTCAAATGTTTCTCATGAAAATTATGGTAAAGAAAGGGCCAGAAAACAAATCCAATATTTTTTTAAAAAAATAAACATAATAAAACTAAAAAAGGGACATAATTATTCCAAATGCTAGCTTTACTATTTACCTAAAAAGCAATCAAATTACAAGCGAACATATCAATGAAAGTCGAAAGGCTAGGGATAAAAGAGGAGATAATTGAGAAATCCCACATCGGAGAAACACGAAGCAGGGACCTCACAAAGTGCTATAAATAAAAGACAATGGCTAACTTTCAAACATACTTACCTGGACGGGGTCGATGGGCGATCAGCAAGGCTCATGGCCTAGGTTGGTGACCTCCATTGCACTTACCGGAGGGGTGCCCGCCTAAGGTCTGCCCAAAGTGGCAGAGCCTACGTCATAATTTGTGGTAGTGGGGGCCTGCGTTCGCGCGGCCCCTTCCAATCTCCCAGTTCAAATTCCTTTAGCTTCCAGCTGTTTTCTACACACTGATTTTTTATTCTTGAGGGTTGATAATGATATCTTTTCAAAATGCTTGTTTTGTGTTATATATAAATGAATTGTTGGTTGGTGAGTGATTTGTGATATCAATTTGATGGATCAAGGATTTGTAAATATAAGTTGATTGATGAAAATGGTATATGGGGTGGGGTATATAAATTGATTGATGAATGATTCAAGCTGTGAAACGATTGAGAGGAAATTATTTTATTGAATAATTTCAATTCGTGATGCAGGGTATTGCCGCAGAACTAATGTGTAGATTCGCTTTATGTCTTGTCTTTCATTTTCTGGATCAATGGAAGGTGAAGATATAATCGATAGAACCCTATTATGTCATCCTCAGCTGAACATGGCTAGGGCGTAGCAATTCCATAATTTCTAAGGGGTGAAGTTTCATGGGGGAGAGAGGGAGAATGGAAGGAGTGTTGGGTGGCAAATAGTTCATGTTCATAACCTTTTTGGAAGTGAGCTTTTTTCTTAATGATCGTGAGAAATGTAGTGCTTTCAACTTCAGAGAATTGAAATCTCTTTTATTTGAACAATGAAGTCCCAAACAACTGCCTTTGAGGAATGTGGATCAAGAATTAGAAGCATTAGCTTTTATGTTCTGTTAGCCATTTCCTATTCATTCTCTCAAAAACCAAGGGAAGTTTTGGATTCTAATAAAAGTTTTCAATAACTTGTTTTTGTTTTAAGAATTTGACACTAGGAATTCAAGTGTTCCCTCTAAGATAAATGAAAATTGTAATAGGGAAGTGGGAAAGAAACAAAGCAGCAAAATTTCAAAAACAAACAATGGAAAATGAAATTTACAAATGGGCCTGATTTATATTGTGTGTTTTTGTTCAATGTTATTTGATTCATGTTATCTGAAGCTCCATAGTTAAGTAAGAATGTTTTCTTACATGTCAGTTTTTGAGGCATTGAAACTGATTCATAAATTTGGAAGGAACTCAATTTGCTCCTCAGCTTGATTTGTTCATGTCGTCTCTGTTCAAACTTGAGATGTTTCTTTACTTCCCAGCACATGTCTTAGTATGTGATAGTCTTCTTACAGAGTTCACAAAAAATTTCACCTTTTCTTGCATTTTCTATAATCTATTTTCTTTAAAACCATCTGGCAATTTGAAGGCCTACTAGAACACATTTATAGAAGAGTTTTAGAAACTCGTGGCCTGAGAGTGAGAACATTCATCAAATGCTGAAAAAGAATACTAGAAGGACCTCTTTAGCATCTATATCTTTCCAATAAAGTTTCTTTTTACTTTTCTTTAGCCGCAACTCCGTGCAGGTTGCCAGTCATGAGGTGTTTGAATGGAGTGGTGTTAATCAGGTCTACTCCTAAATGATAGCCAAACGTCCATAGCGATGTTTTTTTTAATCCTTTGATGTAGGCTCTTCCCATCATTGTGAGCAGAATTTACCAAGTGTTGTTCATCCATCAATAGAGAACGTGGTCTGACTTTAGACCGTTGTGAGGCAGGTCACACATGAAATGGTAAAACAGTTGAGTTATCAAGTCTATTGGAACTGTGTCATTTTATTTTGAAAAGACTATGGTAGTGAAATAAAGGAATTGTTTCTTTTAGTTGACTCATAGCTTTGACTCCCTCCCCTAATAAAAGGTGGACGACTTGATAATATGCATGAATTTAGATTAGAAAGGCAGGCTTGGTTGTGTTAAACTAAGTTAATGTGGAAGCTATAAGGAGGAGAGAAAAAAAATAGAAAAAATTGGGTAAAGAAGCAAGATGTAACATTTTCAAAACGTTAGTTTGTACCAAATGCCTATTCAACAATTGGGTAAGTTAAAGTTCCATTCGATCGAGTAGTTTTTATCTAAAAGTTAGAAAGCGTGCACAATATTTTGCAGAAGAATAAGGATTGCTGTTATTTTCTTTTTTTTTTAAAAAAAAAAAAAAAAAAGAAAGAAAGAGGAAAGAAAATTGTTAGAAACTCTTTCTTTCTATCTCAAAAATATTCCGTAATCTAAAAGTCAGAAATTTGATTTCTTCCTTGTTGGCTCGAATATCTTCACACATGTGAGGGCAAAAAAATTGAACTTTTGTATAGGTAAACCGCCTAATATTTGAACTTTAAAGAACCGCCTAATATTTGAACTTTAAAGAGAACCAAGAATATTAGTCTTAAGCACAAAACTTAGAGCAAAAATGATTATTAGAGTCTTGTTTGATAATGATTTTGTTATTAAAACTAAGGTTTGTTTCATAGACTTTGGTATTATGATGTGTTCAAATCTTTTTAGGATTTTTCATATGGTGTGTTCACTTCTTTTGAAACAGAGGGATTTTTAAGTTCGATTGGTGCAAGCACTGACATGCCCAAAAAGTCTAACAAGAAAAAGTGACTATAAATCAAAGGAAAACCACTCAATCCTCCTCTTTATTACTTACAAATCAGAGGAGAGAAAGCTGTAAGCAATCAAATCCTTGATCTCACCCTTAATGTAACAATATTTCCTCAAAGTGCCCTCCTTCTGAAACCCAACTTTCTCAAGAACTCTTTGAGATCCCATATTCTCCACAGACACAAACGCCTGCAATCTCACCACATCAGGGAAGCTTCGAAACACCTCAGGAACAGCCATTCTCAATGCCTTAGTCGCAATTCCTCGACCCCAATACTCCGCCACGGCATATCCGACATCCGCCTTGCACAGATCCTCACCTGACCACGGATAAACCGAGACAAACCCGATACAGCGGCCGTCGAGGCAAATTGACCGACGCCAAGGATGTGGGATACAAACATCCCTAATGAAAGCCAGTGCTCGTTCCTTGGAAGTGAAAACAGTCCATCTAATGAACTTCATGACCCGATCATCCCCAGCCCAAAGCATGAAATCATCAACATCGGAGAGGCGAAATGGGCGAAGAGTGAGTTCCATTACTGGTTGAGTTGCCCTTGAAGTGTTCGATGAAATGCGTAAGAGAAACAATGATTTTGAGAGTGAAAGAATTGGGGAGGGGCTGCGCGTTGACGCAAGCCCCAACTACCACAAATTATGACGTAGGCTCTGCCGCAAGGGCAGACCTTAGACGCGCACCCTTCCAAAGTGCAAGGGAAGTCACGATGTCTAGGCCATGGCTCTTCCTGATCGGCCATCGACCCCGTCCAGGTATGTACCTTTTACCGAACATCTCCACTTCCTTTTTATACTGCGCTTACTCCTTCCCGGTCTTGGGATTCTCCGATGTGGGACTTAAATAAATGACTTACCCAACCTCCTCTCGCCATATTTTTTTCCCTTCTCTTCTAATTATTTGCTTTTCTTCCTCCTCCATAAATAGTTTTTAGGAAAATTATTATTATTATTATTTTTTAATATTGAGTTTGTAGGAATGCTTGGGTGTTGGGTTAATTATTTAATTTAAAAAATGAATTTGAT

mRNA sequence

CATGGCCTAGGTTGGTGACCTCCATTGCACTTACCGGAGGGGTGCCCGCCTAAGGTCTGCCCAAAGCGGCGGAGCCTACGTCATAATTTGTGGTAGTGGGGGCCTGCGTTCGCGCGGCCCCTGTGAATTCACTAGTGCAAGTTCTTTCATTTTCCAGGGTATTGCCGCAGAACTAATGTGTAGATTCGCTTTATGTCTTGTCTTTCATTTTCTGGATCAATGGAAGGTGAAGATATAATCGATAGAACCCTATTATGTCATCCTCAGCTGAACATGGCTAGGGCGTAGCAATTCCATAATTTCTAAGGGGTGAAGTTTCATGGGGGAGAGAGGGAGAATGGAAGGAGTGTTGGGTGGCAAATAGTTCATGTTCATAACCTTTTTGGAAGTGAGCTTTTTTCTTAATGATCGTGAGAAATGTAGTGCTTTCAACTTCAGAGAATTGAAATCTCTTTTATTTGAACAATGAAGTCCCAAACAACTGCCTTTGAGGAATGTGGATCAAGAATTAGAAGCATTAGCTTTTATGTTCTGTTAGCCATTTCCTATTCATTCTCTCAAAAACCAAGGGAAGTTTTGGATTCTAATAAAAGTTTTCAATAACTTGTTTTTGTTTTAAGAATTTGACACTAGGAATTCAAGTGTTCCCTCTAAGATAAATGAAAATTGTAATAGGGAAGTGGGAAAGAAACAAAGCAGCAAAATTTCAAAAACAAACAATGGAAAATGAAATTTACAAATGGGCCTGATTTATATTGTGTGTTTTTGTTCAATGTTATTTGATTCATGTTATCTGAAGCTCCATAGTTAAGTAAGAATGTTTTCTTACATGTCAGTTTTTGAGGCATTGAAACTGATTCATAAATTTGGAAGGAACTCAATTTGCTCCTCAGCTTGATTTGTTCATGTCGTCTCTGTTCAAACTTGAGATGTTTCTTTACTTCCCAGCACATGTCTTAGTATGTGATAGTCTTCTTACAGAGTTCACAAAAAATTTCACCTTTTCTTGCATTTTCTATAATCTATTTTCTTTAAAACCATCTGGCAATTTGAAGGCCTACTAGAACACATTTATAGAAGAGTTTTAGAAACTCGTGGCCTGAGAGTGAGAACATTCATCAAATGCTGAAAAAGAATACTAGAAGGACCTCTTTAGCATCTATATCTTTCCAATAAAGTTTCTTTTTACTTTTCTTTAGCCGCAACTCCGTGCAGGTTGCCAGTCATGAGGTGTTTGAATGGAGTGGTGTTAATCAGGTCTACTCCTAAATGATAGCCAAACGTCCATAGCGATGTTTTTTTTAATCCTTTGATGTAGGCTCTTCCCATCATTGTGAGCAGAATTTACCAAGTGTTGTTCATCCATCAATAGAGAACGTGGTCTGACTTTAGACCGTTGTGAGGCAGGTCACACATGAAATGGTAAAACAAGGGATTTTTAAGTTCGATTGGTGCAAGCACTGACATGCCCAAAAAGTCTAACAAGAAAAAGTGACTATAAATCAAAGGAAAACCACTCAATCCTCCTCTTTATTACTTACAAATCAGAGGAGAGAAAGCTGTAAGCAATCAAATCCTTGATCTCACCCTTAATGTAACAATATTTCCTCAAAGTGCCCTCCTTCTGAAACCCAACTTTCTCAAGAACTCTTTGAGATCCCATATTCTCCACAGACACAAACGCCTGCAATCTCACCACATCAGGGAAGCTTCGAAACACCTCAGGAACAGCCATTCTCAATGCCTTAGTCGCAATTCCTCGACCCCAATACTCCGCCACGGCATATCCGACATCCGCCTTGCACAGATCCTCACCTGACCACGGATAAACCGAGACAAACCCGATACAGCGGCCGTCGAGGCAAATTGACCGACGCCAAGGATGTGGGATACAAACATCCCTAATGAAAGCCAGTGCTCGTTCCTTGGAAGTGAAAACAGTCCATCTAATGAACTTCATGACCCGATCATCCCCAGCCCAAAGCATGAAATCATCAACATCGGAGAGGCGAAATGGGCGAAGAGTGAGTTCCATTACTGGTTGAGTTGCCCTTGAAGTGTTCGATGAAATGCGTAAGAGAAACAATGATTTTGAGAGTGAAAGAATTGGGGAGGGGCTGCGCGTTGACGCAAGCCCCAACTACCACAAATTATGACGTAGGCTCTGCCGCAAGGGCAGACCTTAGACGCGCACCCTTCCAAAGTGCAAGGGAAGTCACGATGTCTAGGCCATGGCTCTTCCTGATCGGCCATCGACCCCGTCCAGGTATGTACCTTTTACCGAACATCTCCACTTCCTTTTTATACTGCGCTTACTCCTTCCCGGTCTTGGGATTCTCCGATGTGGGACTTAAATAAATGACTTACCCAACCTCCTCTCGCCATATTTTTTTCCCTTCTCTTCTAATTATTTGCTTTTCTTCCTCCTCCATAAATAGTTTTTAGGAAAATTATTATTATTATTATTTTTTAATATTGAGTTTGTAGGAATGCTTGGGTGTTGGGTTAATTATTTAATTTAAAAAATGAATTTGAT

Coding sequence (CDS)

ATGAAATGCGTAAGAGAAACAATGATTTTGAGAGTGAAAGAATTGGGGAGGGGCTGCGCGTTGACGCAAGCCCCAACTACCACAAATTATGACGTAGGCTCTGCCGCAAGGGCAGACCTTAGACGCGCACCCTTCCAAAGTGCAAGGGAAGTCACGATGTCTAGGCCATGGCTCTTCCTGATCGGCCATCGACCCCGTCCAGGTATGTACCTTTTACCGAACATCTCCACTTCCTTTTTATACTGCGCTTACTCCTTCCCGGTCTTGGGATTCTCCGATGTGGGACTTAAATAA

Protein sequence

MKCVRETMILRVKELGRGCALTQAPTTTNYDVGSAARADLRRAPFQSAREVTMSRPWLFLIGHRPRPGMYLLPNISTSFLYCAYSFPVLGFSDVGLK

Homology

[Close]

BLAST of Clc03G17780 vs. NCBI nr
Match: KAG4931214.1 (hypothetical protein JHK86_048175 [Glycine max] >KAG4933970.1 hypothetical protein JHK87_047972 [Glycine soja] >KAG4944159.1 hypothetical protein JHK85_048805 [Glycine max] >KAG5103242.1 hypothetical protein JHK84_048211 [Glycine max])

HSP 1 Score: 62.4 bits (150), Expect = 2.5e-06
Identity = 33/49 (67.35%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 17  RGCALTQAPTTTNYDVGSAARADLRRAPFQSAREVTMSRPWLFLIGHRP 66
           RG A TQAPTTTNYDVGSA  ADLR+AP QSA EVT        +GHRP
Sbjct: 140 RGAARTQAPTTTNYDVGSATWADLRKAPLQSAMEVTS-------LGHRP 181

[Close]

BLAST of Clc03G17780 vs. NCBI nr
Match: KAG5032259.1 (hypothetical protein JHK85_016241 [Glycine max])

HSP 1 Score: 62.4 bits (150), Expect = 2.5e-06
Identity = 33/49 (67.35%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 17  RGCALTQAPTTTNYDVGSAARADLRRAPFQSAREVTMSRPWLFLIGHRP 66
           RG A TQAPTTTNYDVGSA  ADLR+AP QSA EVT        +GHRP
Sbjct: 202 RGAARTQAPTTTNYDVGSATWADLRKAPLQSAMEVTS-------LGHRP 243

[Close]

BLAST of Clc03G17780 vs. NCBI nr
Match: KAG5046456.1 (hypothetical protein JHK86_015862 [Glycine max])

HSP 1 Score: 62.4 bits (150), Expect = 2.5e-06
Identity = 33/49 (67.35%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 17  RGCALTQAPTTTNYDVGSAARADLRRAPFQSAREVTMSRPWLFLIGHRP 66
           RG A TQAPTTTNYDVGSA  ADLR+AP QSA EVT        +GHRP
Sbjct: 194 RGAARTQAPTTTNYDVGSATWADLRKAPLQSAMEVTS-------LGHRP 235

[Close]

BLAST of Clc03G17780 vs. NCBI nr
Match: KAG5017531.1 (hypothetical protein JHK85_023667 [Glycine max] >KAG5027283.1 hypothetical protein JHK86_023197 [Glycine max])

HSP 1 Score: 62.4 bits (150), Expect = 2.5e-06
Identity = 33/49 (67.35%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 17  RGCALTQAPTTTNYDVGSAARADLRRAPFQSAREVTMSRPWLFLIGHRP 66
           RG A TQAPTTTNYDVGSA  ADLR+AP QSA EVT        +GHRP
Sbjct: 105 RGAARTQAPTTTNYDVGSATWADLRKAPLQSAMEVTS-------LGHRP 146

[Close]

BLAST of Clc03G17780 vs. NCBI nr
Match: KAG5019927.1 (hypothetical protein JHK87_015782 [Glycine soja])

HSP 1 Score: 60.8 bits (146), Expect = 7.3e-06
Identity = 32/49 (65.31%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 17 RGCALTQAPTTTNYDVGSAARADLRRAPFQSAREVTMSRPWLFLIGHRP 66
          +G A TQAPTTTNYDVGSA  ADLR+AP QSA EVT        +GHRP
Sbjct: 30 QGAARTQAPTTTNYDVGSATWADLRKAPLQSAMEVTS-------LGHRP 71

[Close]

BLAST of Clc03G17780 vs. ExPASy TrEMBL
Match: A0A6A5NKM8 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00042247 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.3e-04
Identity = 32/61 (52.46%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 6   ETMILRVKELG-RGCALTQAPTTTNYDVGSAARADLRRAPFQSAREVTMSRPWLFLIGHR 65
           + MIL+  +L  RG A TQ PTTTNYDVGS    DLRRAP  SA E+T        +GH 
Sbjct: 116 QLMILKKFKLQLRGVARTQTPTTTNYDVGSTTWVDLRRAPLLSAMEITS-------LGHE 169

[Close]

BLAST of Clc03G17780 vs. ExPASy TrEMBL
Match: A0A5A7QMK7 (Leucine-rich receptor-like protein kinase family protein OS=Striga asiatica OX=4170 GN=STAS_23621 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.6e-04
Identity = 34/64 (53.12%), Postives = 36/64 (56.25%), Query Frame = 0


Query: 4   VRETMILRVKELGR--GCALTQAPTTTNYDVGSAARADLRRAPFQSAREVTMSRPWLFLI 63
           V  T IL  +  G   G A TQAPTTTNYDVGS   ADLRRAP  SA EV         +
Sbjct: 186 VMNTDILMHQRAGNWAGAARTQAPTTTNYDVGSTTWADLRRAPLPSAMEVAN-------L 242

Query: 64  GHRP 66
           GH P
Sbjct: 246 GHGP 242

[Close]

BLAST of Clc03G17780 vs. ExPASy TrEMBL
Match: G7IWM7 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_3g029970 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.3e-04
Identity = 28/48 (58.33%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 18 GCALTQAPTTTNYDVGSAARADLRRAPFQSAREVTMSRPWLFLIGHRP 66
          G A TQAPT TNYDVGS    DLR+AP QSA EVT        +GH P
Sbjct: 20 GAARTQAPTATNYDVGSTTWVDLRKAPLQSAMEVT-------FLGHGP 60

[Close]

BLAST of Clc03G17780 vs. ExPASy TrEMBL
Match: A0A151T1E8 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_023290 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.3e-04
Identity = 32/52 (61.54%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 14 ELGRGCALTQAPTTTNYDVGSAARADLRRAPFQSAREVTMSRPWLFLIGHRP 66
          ELG G A TQAPT TNYDVGSA  ADLR AP  SA EVT        +GH P
Sbjct: 39 ELG-GAARTQAPTATNYDVGSATWADLREAPLLSAMEVTP-------LGHGP 82

The following BLAST results are available for this feature:

BLAST of Clc03G17780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG4931214.1	2.5e-06	67.35	hypothetical protein JHK86_048175 [Glycine max] >KAG4933970.1 hypothetical prote...	[more]
KAG5032259.1	2.5e-06	67.35	hypothetical protein JHK85_016241 [Glycine max]	[more]
KAG5046456.1	2.5e-06	67.35	hypothetical protein JHK86_015862 [Glycine max]	[more]
KAG5017531.1	2.5e-06	67.35	hypothetical protein JHK85_023667 [Glycine max] >KAG5027283.1 hypothetical prote...	[more]
KAG5019927.1	7.3e-06	65.31	hypothetical protein JHK87_015782 [Glycine soja]	[more]

BLAST of Clc03G17780 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc03G17780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A5NKM8	3.3e-04	52.46	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00042247 PE=4 SV=1	[more]
A0A5A7QMK7	5.6e-04	53.13	Leucine-rich receptor-like protein kinase family protein OS=Striga asiatica OX=4...	[more]
G7IWM7	7.3e-04	58.33	Uncharacterized protein OS=Medicago truncatula OX=3880 GN=MTR_3g029970 PE=4 SV=1	[more]
A0A151T1E8	7.3e-04	61.54	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_023290 PE=4 SV=1	[more]

BLAST of Clc03G17780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G17780.1	Clc03G17780.1	mRNA