Clc03G17460 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G17460
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Derlin
Location	ClcChr03: 29762760 .. 29766219 (+)
RNA-Seq Expression	Clc03G17460
Synteny	Clc03G17460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGAGAGCGAAGAAACCAATTCGGATTCGGAACATTCTGGGTCGTATTTGGTTTCCTTCGCCCTTCCATTCTGCAATTTCCATTCTCCATCTTCAAATTTCTTGTCTGCTAAGTTTTGTTCCTCTTCTGGCATTGAAATTTCTTAAAGAAGAATTGGGAGATCTCCACTTCCAAAAGCTTCTTTGAGTTTCATTTCTGTTTCTACAATGTCTTCTCCTGCCGAGTAATGCTGCTTTCCTCTTTGAATTTTACCAATTTTGTATTACCTTTCGATTGGTTTGTTTCATGTTCTAATTTTCTCATTTTCAATGTATACTCTGATTCTTTACTCTCATTTTAATCTTTATCCCTAGTTCTGATCATTATTTATCATCATTCAGATTTTACAACTCTCTTCCACCTATAAGTAAGGCTTATGGAACTCTGTGTCTTTTGGCAACTACCGCCTTTCAACTTGGCTTGTACGATCCCGGGCTTATTGCCTTGGATTACGGACTTGTATTCAAGCATTTTCAGGTATTGACTTCAATCTCCATAGGTATCAGAATGGTGCTACTATATATTTGTTGAGTTTTTACTTTTCTCAAACATCTGCTGGCTCCTAATTCCCTTAGGGCTTTTATCCTGTAAATTCAACATTCTCCTCAATCATTCCTACAAAAAAAGGAAGGAGTTTAGTTCGAGCCTCCCTCTACCTTCCGAAGGGTCATCAAATCTAATACTTATGAGTGATATAGATATCTAGTAATATGGAGATGATATAATATCAGATATAGCTCCGAGTGTGTACTTATGAATGAGGGTGCAATTTATTACAAAATTTCAGCAACATTGGGACATCTTTAACTTAACTTTTGAGGTCATTTTTCAAGCCTCTGATTGTGACTTCAGCAAATTTTCAGTTTAAGCTCCTCTTATAATTAATAATAAGTGTACTCGATGTGGGTTTCTTTATAAACTTCGCTGGTGGTTCTTGCTTCTAGGAGGAACTTTTGTTGTTGATTGGATAGTTTTGTCATTTTTTCCTATATTGATGAAATTTTCTTTGCTTTATAATAAGGTCATGGTTTTAAGCCGTAGTGATTGTCCATTTAGGATGTTAAATGTTATACAAATTCGTTCTATGTTAAATCTTGTTGGGTAAGGCAGTCAACCCATCATATTGCTTGAGACACAATGTATCTCCTCCCTTAGTATCGATTTGCTCTCTTATACTTGTACTCTATATTCTAAAATATGGAGCTTATAAAATTTATTAACGTTAGAAAGCCCTATTTTAAGTATTAGAATAGGCATGTGGGTTAGAATTAGAATTAGAACCAGTTCAAGTATGAACTATTTGTTCTTAGTGTCATCGTCTCTCTATATGAAGCCTAATGGCCAACCCTTTTTTCGAATGTCAATAAATGAAGTGAACTGTGGCAAAAGGCAAGAAAAAGTAGTGAAGAAATGTGATGCAAGAATGGGGGATTTCACATGGAGCCCTAGTCAGGAAAATCATGGACTTCCAAGTTGACTTATGCTTTGGATTTTAAATTCTGAAGTGAAAAGAATCAGCTATTTTTGTTTCTTATTAATAATTTCCGTGTCTCATCAAGGACATTGTTATAAAAGAAAAGTGGTTCTGTACAAAGAGAACGGACTAATGCTTTAATTTGAGTTCCAATACATTCTTTCCATTTATTATTATTACTATTTATGCAAGGCCACCTTATTTTCAGGTGTGGAGGCTATTCACAAACTTCTTCTTCCTAGGAAAATTCTCTATCAATTTTGGAATTCGTTTATTAATGATGTAAGTTTTTATGTGTCACTTTTTTACATGATCTACTGGCAGTACTATCTCATGAAAAGTGGAGAGCTTGTTTTCAAACTCTCGAGATTGTTTTTGATGCGCTAATAGTTTCATGGTTGTGTCCTTACAGAGCAAGATATGGGGTTCAACTTGAGAATGGACCATTTCAAAGGCGAACAGCAGATTTTCTGTGGATGATGATATTTGGAGCCTTGACATTATTGGTTTGTGAGGATCTTTTTCAAGCTATGCATTTAGATGTAGTGATTGTTGCTGGCCTTTGTTTGGCCTTTTTGTATTCTTTCAGCCTTGACTTTTTTGTATTTCTGTTTCTTTGGGAACATTTCATGAAATCCTCCCATCTATGAGTTTTTGGTTGTTGAGTCTTTATTTTAGGTTGAATATTTATGCCGATTTGTTACAACCTTCCTTATTATATATACTTCCTCTTGAATAGGTACTTTCTGCTATCCCGATCTTCTCCTTTTCAGTCTTAGGGATATCACTTGTGTTTATGCTTCTCTACGTCTGGAGTAGAGAGTTCCCTAATGCACAGATCAATATATATGGCCTTGTGACTCTTAAGGTACGGCATTGATTTAGGTTTTGTCAAATTGTTCCTTTTTTCACCCTGGGATTATGTTTCTCACAACCCAAATGTAATGCTTTTTGTGCAGGCATTTTATCTGCCATGGGCCATGCTAGCGCTGGATGTTATTTTTGGTTCACCTCTTGTCCCTGATTTACTCGGAATCTTAGCAGGGCATTTGTACTACTTTTTGACCGTGTTGCATCCACTGGCAGGCGGAAAGAACATATTGAGAACACCATTTTGGATGTATCCTTTTTTGATTTCTTAACAACAAAATTTTCTTGATTCTGCCTATTTCACTTGTAATCTTCCATTTCCAAACAATAAAGTTCTAACTAATGCTTCCCCTCCAGCTAAAGTAAACAGTCATACACTTTGGTGTATGATCTTATTCAACAAAATGTCTTTACATTTCCTTTAACAATTTCTACAGACAGAGGTTAGTCTCAAGATGGAGGATAGGTGCTCCACCAACTCAGCGTGCAGCAATGCCTGATGATAGGAGTACGAGTGGAGCTTTCAGAGGGAGGTCGTATCGGCTTAATGGCTAAACTCATTTCCTGTATAAGAAAACAAAAATGGCCATCCTCTTAGCACTGGAGTTTTTCAGATTGTGCCTGCTAACATGAAGAGGTAAAGATTGGGTTGTAGAATTTGACTAGGTTCAAAAAAGTTGGTCTCGAGCGAATATTTGTTTCATGCGTAGTGATCAGTAAGTGTTTATGTTTCTCGTTGAAGGAATTTGGATTTGCAAATTTTGTTCTGCAGGAGATTGAAGTTGCGATAATCTTGACTCTTAGAGTTTCGCTTTGAGAGATTTCTTCTGAACTCTGATCGAATAAAATCCTAAATGTTCCCAATCCTTCTGATTAGAAATACCAGAGACTGTTTTCCCTCTCTTTTTTGTTAATATTTTGAAATTTAAAATGTAGTTTTATGATATTTAGAGTAAAATGTGACTGATAATGGGATATGAGTTTTTATGTTTGGTTTTTATATTGTTAAAAGTGCTTCGAGACAAAAATATTTTCTCACAGACCTTTGAAATTGTTTTTGCTAGTTTTATACTTAC

mRNA sequence

TACGAGAGCGAAGAAACCAATTCGGATTCGGAACATTCTGGGTCGTATTTGGTTTCCTTCGCCCTTCCATTCTGCAATTTCCATTCTCCATCTTCAAATTTCTTGTCTGCTAAGTTTTGTTCCTCTTCTGGCATTGAAATTTCTTAAAGAAGAATTGGGAGATCTCCACTTCCAAAAGCTTCTTTGAGTTTCATTTCTGTTTCTACAATGTCTTCTCCTGCCGAATTTTACAACTCTCTTCCACCTATAAGTAAGGCTTATGGAACTCTGTGTCTTTTGGCAACTACCGCCTTTCAACTTGGCTTGTACGATCCCGGGCTTATTGCCTTGGATTACGGACTTGTATTCAAGCATTTTCAGGTGTGGAGGCTATTCACAAACTTCTTCTTCCTAGGAAAATTCTCTATCAATTTTGGAATTCGTTTATTAATGATAGCAAGATATGGGGTTCAACTTGAGAATGGACCATTTCAAAGGCGAACAGCAGATTTTCTGTGGATGATGATATTTGGAGCCTTGACATTATTGGTACTTTCTGCTATCCCGATCTTCTCCTTTTCAGTCTTAGGGATATCACTTGTGTTTATGCTTCTCTACGTCTGGAGTAGAGAGTTCCCTAATGCACAGATCAATATATATGGCCTTGTGACTCTTAAGGCATTTTATCTGCCATGGGCCATGCTAGCGCTGGATGTTATTTTTGGTTCACCTCTTGTCCCTGATTTACTCGGAATCTTAGCAGGGCATTTGTACTACTTTTTGACCGTGTTGCATCCACTGGCAGGCGGAAAGAACATATTGAGAACACCATTTTGGATACAGAGGTTAGTCTCAAGATGGAGGATAGGTGCTCCACCAACTCAGCGTGCAGCAATGCCTGATGATAGGAGTACGAGTGGAGCTTTCAGAGGGAGGTCGTATCGGCTTAATGGCTAAACTCATTTCCTGTATAAGAAAACAAAAATGGCCATCCTCTTAGCACTGGAGTTTTTCAGATTGTGCCTGCTAACATGAAGAGGTAAAGATTGGGTTGTAGAATTTGACTAGGTTCAAAAAAGTTGGTCTCGAGCGAATATTTGTTTCATGCGTAGTGATCAGTAAGTGTTTATGTTTCTCGTTGAAGGAATTTGGATTTGCAAATTTTGTTCTGCAGGAGATTGAAGTTGCGATAATCTTGACTCTTAGAGTTTCGCTTTGAGAGATTTCTTCTGAACTCTGATCGAATAAAATCCTAAATGTTCCCAATCCTTCTGATTAGAAATACCAGAGACTGTTTTCCCTCTCTTTTTTGTTAATATTTTGAAATTTAAAATGTAGTTTTATGATATTTAGAGTAAAATGTGACTGATAATGGGATATGAGTTTTTATGTTTGGTTTTTATATTGTTAAAAGTGCTTCGAGACAAAAATATTTTCTCACAGACCTTTGAAATTGTTTTTGCTAGTTTTATACTTAC

Coding sequence (CDS)

ATGTCTTCTCCTGCCGAATTTTACAACTCTCTTCCACCTATAAGTAAGGCTTATGGAACTCTGTGTCTTTTGGCAACTACCGCCTTTCAACTTGGCTTGTACGATCCCGGGCTTATTGCCTTGGATTACGGACTTGTATTCAAGCATTTTCAGGTGTGGAGGCTATTCACAAACTTCTTCTTCCTAGGAAAATTCTCTATCAATTTTGGAATTCGTTTATTAATGATAGCAAGATATGGGGTTCAACTTGAGAATGGACCATTTCAAAGGCGAACAGCAGATTTTCTGTGGATGATGATATTTGGAGCCTTGACATTATTGGTACTTTCTGCTATCCCGATCTTCTCCTTTTCAGTCTTAGGGATATCACTTGTGTTTATGCTTCTCTACGTCTGGAGTAGAGAGTTCCCTAATGCACAGATCAATATATATGGCCTTGTGACTCTTAAGGCATTTTATCTGCCATGGGCCATGCTAGCGCTGGATGTTATTTTTGGTTCACCTCTTGTCCCTGATTTACTCGGAATCTTAGCAGGGCATTTGTACTACTTTTTGACCGTGTTGCATCCACTGGCAGGCGGAAAGAACATATTGAGAACACCATTTTGGATACAGAGGTTAGTCTCAAGATGGAGGATAGGTGCTCCACCAACTCAGCGTGCAGCAATGCCTGATGATAGGAGTACGAGTGGAGCTTTCAGAGGGAGGTCGTATCGGCTTAATGGCTAA

Protein sequence

MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVLGISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMPDDRSTSGAFRGRSYRLNG

Homology

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BLAST of Clc03G17460 vs. NCBI nr
Match: XP_038878469.1 (derlin-1 [Benincasa hispida])

HSP 1 Score: 474.6 bits (1220), Expect = 5.3e-130
Identity = 236/242 (97.52%), Postives = 239/242 (98.76%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLY+PGLIALDYGLVFKHFQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYNPGLIALDYGLVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSF VL
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFPVL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH
Sbjct: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMPDDRSTSGAFRGRSYRL 240
           LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPP QRAA+PDDR T+GAFRGRSYRL
Sbjct: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPIQRAAVPDDRGTTGAFRGRSYRL 240

Query: 241 NG 243
           NG
Sbjct: 241 NG 242

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BLAST of Clc03G17460 vs. NCBI nr
Match: XP_008450797.1 (PREDICTED: derlin-1 [Cucumis melo] >TYK10137.1 derlin-1 [Cucumis melo var. makuwa])

HSP 1 Score: 469.5 bits (1207), Expect = 1.7e-128
Identity = 234/242 (96.69%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDP LIALDYGLVFKHFQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPMLIALDYGLVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFG LTLLVL+AIPIF F VL
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGGLTLLVLAAIPIFRFPVL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH
Sbjct: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMPDDRSTSGAFRGRSYRL 240
           LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPP QRAA+PDDR TSGAFRGRSYRL
Sbjct: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPMQRAAVPDDRGTSGAFRGRSYRL 240

Query: 241 NG 243
           NG
Sbjct: 241 NG 242

[Close]

BLAST of Clc03G17460 vs. NCBI nr
Match: XP_004135679.1 (derlin-1 [Cucumis sativus] >KGN66192.1 hypothetical protein Csa_007006 [Cucumis sativus])

HSP 1 Score: 468.8 bits (1205), Expect = 2.9e-128
Identity = 233/242 (96.28%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSPAEFYNSLPPISKAYGTLC LATTAFQLGLYDP LIALDYGLVFKHFQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTLCFLATTAFQLGLYDPMLIALDYGLVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFG+LTLLVL+AIPIF F VL
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGSLTLLVLAAIPIFQFPVL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH
Sbjct: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMPDDRSTSGAFRGRSYRL 240
           LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPP QRAA+PDDR TSGAFRGRSYRL
Sbjct: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPMQRAAVPDDRGTSGAFRGRSYRL 240

Query: 241 NG 243
           NG
Sbjct: 241 NG 242

[Close]

BLAST of Clc03G17460 vs. NCBI nr
Match: XP_022961351.1 (derlin-1-like [Cucurbita moschata] >XP_023516821.1 derlin-1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023516822.1 derlin-1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 465.7 bits (1197), Expect = 2.4e-127
Identity = 233/241 (96.68%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSPAEFYNSLPPISKAYGT+CLLATTAFQLGLYDPGLIALDY LVFKHFQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTMCLLATTAFQLGLYDPGLIALDYELVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH
Sbjct: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMPDDRSTSGAFRGRSYRL 240
           LYYFLTVLHPLAGGKNILRTPFW+QR+VSRWRIGAPP QR A+PDDR TSGAFRGRSYRL
Sbjct: 181 LYYFLTVLHPLAGGKNILRTPFWVQRIVSRWRIGAPPIQR-AVPDDRRTSGAFRGRSYRL 240

Query: 241 N 242
           N
Sbjct: 241 N 240

[Close]

BLAST of Clc03G17460 vs. NCBI nr
Match: KAG7023624.1 (Derlin-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 464.5 bits (1194), Expect = 5.4e-127
Identity = 232/241 (96.27%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MS+PAEFYNSLPPISKAYGT+CLLATTAFQLGLYDPGLIALDY LVFKHFQVWRLFTNFF
Sbjct: 1   MSTPAEFYNSLPPISKAYGTMCLLATTAFQLGLYDPGLIALDYELVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH
Sbjct: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMPDDRSTSGAFRGRSYRL 240
           LYYFLTVLHPLAGGKNILRTPFW+QR+VSRWRIGAPP QR A+PDDR TSGAFRGRSYRL
Sbjct: 181 LYYFLTVLHPLAGGKNILRTPFWVQRIVSRWRIGAPPIQR-AVPDDRRTSGAFRGRSYRL 240

Query: 241 N 242
           N
Sbjct: 241 N 240

[Close]

BLAST of Clc03G17460 vs. ExPASy Swiss-Prot
Match: Q8VZU9 (Derlin-1 OS=Arabidopsis thaliana OX=3702 GN=DER1 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.7e-94
Identity = 180/264 (68.18%), Postives = 199/264 (75.38%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSP EFYNSLPPI+KAYGTLC   T A QLGL  P  IAL   LV K FQ+WRL TN F
Sbjct: 1   MSSPGEFYNSLPPITKAYGTLCFFTTVATQLGLVAPVHIALIPELVLKQFQIWRLITNLF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLG FSINFGIRLLMIARYGVQLE GPF+RRTADFLWMMIFG+ TLLVLS IP F    L
Sbjct: 61  FLGGFSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGSFTLLVLSVIPFFWTPFL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           G+SLVFMLLY+WSREFPNA I++YGLVTLKAFYLPWAMLALDVIFGSP++PDLLGI+AGH
Sbjct: 121 GVSLVFMLLYLWSREFPNANISLYGLVTLKAFYLPWAMLALDVIFGSPIMPDLLGIIAGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQ--------------------- 240
           LYYFLTVLHPLA GKN L+TP W+ ++V+RWRIGAP                        
Sbjct: 181 LYYFLTVLHPLATGKNYLKTPKWVNKIVARWRIGAPVASVRQAGGVGAAGPGAGGGVGGG 240

[Close]

BLAST of Clc03G17460 vs. ExPASy Swiss-Prot
Match: Q06397 (Derlin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=DER1 PE=2 SV=2)

HSP 1 Score: 334.0 bits (855), Expect = 1.5e-90
Identity = 164/241 (68.05%), Postives = 193/241 (80.08%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSPAE+YNSLPPISKAYGTLC  AT   QL + +P  +AL Y  VFK FQ+WRLFT+FF
Sbjct: 1   MSSPAEYYNSLPPISKAYGTLCFFATVLCQLQILNPPFLALYYPFVFKKFQIWRLFTSFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLGKFSINFGIRLLMIARYGVQLE G F++RTADFLWMMIFGA++LL LSAIP      L
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLEKGAFEKRTADFLWMMIFGAISLLALSAIPFLDIYFL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           G+ +V MLLYVWSRE+PN+QI++YGLV L++FYLPWAML LDVIFGS ++P LLGIL GH
Sbjct: 121 GVPMVSMLLYVWSREYPNSQISMYGLVQLRSFYLPWAMLGLDVIFGSEILPGLLGILVGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMPDDRSTSGAFRGRSYRL 240
            YYFL+VLHPLA GKN L+TP W+ ++V+R+RIG             + SGAFRGRSYRL
Sbjct: 181 TYYFLSVLHPLATGKNYLKTPMWVHKIVARFRIGVQANAPVRPAAANTGSGAFRGRSYRL 240

Query: 241 N 242
           +
Sbjct: 241 S 241

[Close]

BLAST of Clc03G17460 vs. ExPASy Swiss-Prot
Match: Q4G2J6 (Derlin-1.1 OS=Zea mays OX=4577 GN=DER1.1 PE=2 SV=2)

HSP 1 Score: 320.1 bits (819), Expect = 2.2e-86
Identity = 162/242 (66.94%), Postives = 187/242 (77.27%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSPAE+Y SLPPISKAYGTLC   T   QL +  P  + LDY LVFK F++WRL T+FF
Sbjct: 1   MSSPAEYYKSLPPISKAYGTLCFFTTVLVQLQILHPLFLYLDYPLVFKKFEIWRLLTSFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FL  FS+ FGIRLLMIARYGV LE G F +RTADFLWMMIFGA++LLVLS IP+F+   L
Sbjct: 61  FLAPFSMKFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAISLLVLSIIPLFNSFFL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           GI +V MLLYVWSRE PNAQINIYGLV L++FYLPWAML LDVIFGS L+P LLGI+ GH
Sbjct: 121 GIPMVSMLLYVWSRENPNAQINIYGLVQLRSFYLPWAMLLLDVIFGSSLMPGLLGIMVGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMP-DDRSTSGAFRGRSYR 240
           LYYF  VLHPLA GK+ L+TP W+ ++V+R+RIG         P +  S SG FRGRSYR
Sbjct: 181 LYYFFAVLHPLATGKSYLKTPKWVHKIVARFRIGMQANSPVRPPANGNSGSGVFRGRSYR 240

Query: 241 LN 242
           LN
Sbjct: 241 LN 242

[Close]

BLAST of Clc03G17460 vs. ExPASy Swiss-Prot
Match: Q4G2J5 (Derlin-1.2 OS=Zea mays OX=4577 GN=DER1.2 PE=2 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 3.7e-86
Identity = 160/242 (66.12%), Postives = 189/242 (78.10%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSPAE+Y SLPPISKAYGTLC   T   +L + +P  + L Y  VFK F+VWR+FT+FF
Sbjct: 1   MSSPAEYYKSLPPISKAYGTLCFFTTVLVRLHILNPLFLYLYYPRVFKKFEVWRIFTSFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLG FSINFGIRLLMIARYGV LE G F +RTADFLWMMIFGA++LLVLS IP  +  VL
Sbjct: 61  FLGPFSINFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAISLLVLSVIPQLNTYVL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           G+ +V ML+YVWSRE PNAQINIYG++ LKAFYLPW ML LDVIFGSPL+P LLGI+ GH
Sbjct: 121 GLPMVSMLVYVWSRENPNAQINIYGILQLKAFYLPWVMLLLDVIFGSPLMPGLLGIMVGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMP-DDRSTSGAFRGRSYR 240
           LYY+  VLHPLA GKN L+TP W+ ++V+R+RIG         P +  + +GAFRGRSYR
Sbjct: 181 LYYYFAVLHPLATGKNYLKTPKWVHKIVARFRIGMQANAPVRAPANGNAGTGAFRGRSYR 240

Query: 241 LN 242
           LN
Sbjct: 241 LN 242

[Close]

BLAST of Clc03G17460 vs. ExPASy Swiss-Prot
Match: Q96Q80 (Derlin-3 OS=Homo sapiens OX=9606 GN=DERL3 PE=1 SV=2)

HSP 1 Score: 162.2 bits (409), Expect = 7.6e-39
Identity = 86/205 (41.95%), Postives = 129/205 (62.93%), Query Frame = 0


Query: 5   AEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFFFLGK 64
           AEF   +P +++AY   C+L T A QL L  P  +  +  LVF+ FQVWRL TNF F G 
Sbjct: 8   AEFL-QVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTNFLFFGP 67

Query: 65  FSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVLGISL 124
              +F   +L + RY   LE G F+ RTADF++M +FG + + +L  +    F  LG +L
Sbjct: 68  LGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFF--LGQAL 127

Query: 125 VFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYF 184
           + ML+YVWSR  P  ++N +GL+T +A +LPWA++   ++ G+ ++ DLLGI  GH+YYF
Sbjct: 128 MAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGHIYYF 187

Query: 185 LTVLHP-LAGGKNILRTPFWIQRLV 209
           L  + P   GGK +L+TP +++ L+
Sbjct: 188 LEDVFPNQPGGKRLLQTPGFLKLLL 209

[Close]

BLAST of Clc03G17460 vs. ExPASy TrEMBL
Match: A0A5D3CDT1 (Derlin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002800 PE=3 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 8.2e-129
Identity = 234/242 (96.69%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDP LIALDYGLVFKHFQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPMLIALDYGLVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFG LTLLVL+AIPIF F VL
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGGLTLLVLAAIPIFRFPVL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH
Sbjct: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMPDDRSTSGAFRGRSYRL 240
           LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPP QRAA+PDDR TSGAFRGRSYRL
Sbjct: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPMQRAAVPDDRGTSGAFRGRSYRL 240

Query: 241 NG 243
           NG
Sbjct: 241 NG 242

[Close]

BLAST of Clc03G17460 vs. ExPASy TrEMBL
Match: A0A1S3BQ27 (Derlin OS=Cucumis melo OX=3656 GN=LOC103492274 PE=3 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 8.2e-129
Identity = 234/242 (96.69%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDP LIALDYGLVFKHFQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPMLIALDYGLVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFG LTLLVL+AIPIF F VL
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGGLTLLVLAAIPIFRFPVL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH
Sbjct: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMPDDRSTSGAFRGRSYRL 240
           LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPP QRAA+PDDR TSGAFRGRSYRL
Sbjct: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPMQRAAVPDDRGTSGAFRGRSYRL 240

Query: 241 NG 243
           NG
Sbjct: 241 NG 242

[Close]

BLAST of Clc03G17460 vs. ExPASy TrEMBL
Match: A0A0A0LZA3 (Derlin OS=Cucumis sativus OX=3659 GN=Csa_1G575080 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 1.4e-128
Identity = 233/242 (96.28%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSPAEFYNSLPPISKAYGTLC LATTAFQLGLYDP LIALDYGLVFKHFQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTLCFLATTAFQLGLYDPMLIALDYGLVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFG+LTLLVL+AIPIF F VL
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGSLTLLVLAAIPIFQFPVL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH
Sbjct: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMPDDRSTSGAFRGRSYRL 240
           LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPP QRAA+PDDR TSGAFRGRSYRL
Sbjct: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPMQRAAVPDDRGTSGAFRGRSYRL 240

Query: 241 NG 243
           NG
Sbjct: 241 NG 242

[Close]

BLAST of Clc03G17460 vs. ExPASy TrEMBL
Match: A0A6J1HA50 (Derlin OS=Cucurbita moschata OX=3662 GN=LOC111461868 PE=3 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127
Identity = 233/241 (96.68%), Postives = 237/241 (98.34%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSPAEFYNSLPPISKAYGT+CLLATTAFQLGLYDPGLIALDY LVFKHFQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTMCLLATTAFQLGLYDPGLIALDYELVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL
Sbjct: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH
Sbjct: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMPDDRSTSGAFRGRSYRL 240
           LYYFLTVLHPLAGGKNILRTPFW+QR+VSRWRIGAPP QR A+PDDR TSGAFRGRSYRL
Sbjct: 181 LYYFLTVLHPLAGGKNILRTPFWVQRIVSRWRIGAPPIQR-AVPDDRRTSGAFRGRSYRL 240

Query: 241 N 242
           N
Sbjct: 241 N 240

[Close]

BLAST of Clc03G17460 vs. ExPASy TrEMBL
Match: A0A6J1JBH3 (Derlin OS=Cucurbita maxima OX=3661 GN=LOC111485268 PE=3 SV=1)

HSP 1 Score: 463.8 bits (1192), Expect = 4.5e-127
Identity = 232/241 (96.27%), Postives = 236/241 (97.93%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSPAEFYNSLPPISKAYGT+CLLATTAFQLGLYDPGLIALDY LVFKHFQVWRLFTNFF
Sbjct: 1   MSSPAEFYNSLPPISKAYGTMCLLATTAFQLGLYDPGLIALDYELVFKHFQVWRLFTNFF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLG FSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL
Sbjct: 61  FLGNFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH
Sbjct: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQRAAMPDDRSTSGAFRGRSYRL 240
           LYYFLTVLHPLAGGKNILRTPFW+QR+VSRWRIGAPP QR A+PDDR TSGAFRGRSYRL
Sbjct: 181 LYYFLTVLHPLAGGKNILRTPFWVQRIVSRWRIGAPPIQR-AVPDDRRTSGAFRGRSYRL 240

Query: 241 N 242
           N
Sbjct: 241 N 240

[Close]

BLAST of Clc03G17460 vs. TAIR 10
Match: AT4G29330.1 (DERLIN-1 )

HSP 1 Score: 347.1 bits (889), Expect = 1.2e-95
Identity = 180/264 (68.18%), Postives = 199/264 (75.38%), Query Frame = 0


Query: 1   MSSPAEFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFF 60
           MSSP EFYNSLPPI+KAYGTLC   T A QLGL  P  IAL   LV K FQ+WRL TN F
Sbjct: 1   MSSPGEFYNSLPPITKAYGTLCFFTTVATQLGLVAPVHIALIPELVLKQFQIWRLITNLF 60

Query: 61  FLGKFSINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTLLVLSAIPIFSFSVL 120
           FLG FSINFGIRLLMIARYGVQLE GPF+RRTADFLWMMIFG+ TLLVLS IP F    L
Sbjct: 61  FLGGFSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGSFTLLVLSVIPFFWTPFL 120

Query: 121 GISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGILAGH 180
           G+SLVFMLLY+WSREFPNA I++YGLVTLKAFYLPWAMLALDVIFGSP++PDLLGI+AGH
Sbjct: 121 GVSLVFMLLYLWSREFPNANISLYGLVTLKAFYLPWAMLALDVIFGSPIMPDLLGIIAGH 180

Query: 181 LYYFLTVLHPLAGGKNILRTPFWIQRLVSRWRIGAPPTQ--------------------- 240
           LYYFLTVLHPLA GKN L+TP W+ ++V+RWRIGAP                        
Sbjct: 181 LYYFLTVLHPLATGKNYLKTPKWVNKIVARWRIGAPVASVRQAGGVGAAGPGAGGGVGGG 240

[Close]

BLAST of Clc03G17460 vs. TAIR 10
Match: AT4G04860.1 (DERLIN-2.2 )

HSP 1 Score: 142.9 bits (359), Expect = 3.4e-34
Identity = 79/211 (37.44%), Postives = 120/211 (56.87%), Query Frame = 0


Query: 6   EFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFFFLGKF 65
           E+Y  +P I+++Y T  ++ T    L +  P  + L+  LV K +Q WRL TNF +  K 
Sbjct: 7   EWYKQMPIITRSYLTAAVITTVGCSLDIISPYNLYLNPTLVVKQYQYWRLVTNFLYFRKM 66

Query: 66  SINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTL----LVLSAIPIFSFS--- 125
            ++F   +  +ARY   LE   F+ +TADFL+M++FGA  L    L+   IP  S S   
Sbjct: 67  DLDFMFHMFFLARYCKLLEENSFRGKTADFLYMLLFGASVLTGIVLIGGMIPYLSASFAK 126

Query: 126 --VLGISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGI 185
              L  SL FM++YVWS++ P   ++  GL T  A YLPW +L   ++ G+    DLLG+
Sbjct: 127 IIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWVDLLGM 186

Query: 186 LAGHLYYFLTVLHPLAGGKNILRTPFWIQRL 208
           +AGH YYFL  ++P    +  L+TP +++ L
Sbjct: 187 IAGHAYYFLAEVYPRMTNRRPLKTPSFLKAL 217

[Close]

BLAST of Clc03G17460 vs. TAIR 10
Match: AT4G21810.1 (DERLIN-2.1 )

HSP 1 Score: 141.0 bits (354), Expect = 1.3e-33
Identity = 78/211 (36.97%), Postives = 119/211 (56.40%), Query Frame = 0


Query: 6   EFYNSLPPISKAYGTLCLLATTAFQLGLYDPGLIALDYGLVFKHFQVWRLFTNFFFLGKF 65
           E+Y  +P I+++Y T  ++ T    L +  P  + L+  LV K +Q WRL TNF +  K 
Sbjct: 7   EWYKQMPIITRSYLTAAVVTTVGCSLEIISPYNLYLNPTLVVKQYQFWRLVTNFLYFRKM 66

Query: 66  SINFGIRLLMIARYGVQLENGPFQRRTADFLWMMIFGALTL----LVLSAIPIFSFS--- 125
            ++F   +  +ARY   LE   F+ +TADFL+M++FGA  L    L+   IP  S S   
Sbjct: 67  DLDFLFHMFFLARYCKLLEENSFRGKTADFLYMLLFGATVLTGIVLIGGMIPYLSVSFSK 126

Query: 126 --VLGISLVFMLLYVWSREFPNAQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGI 185
              L  SL FM++YVWS++ P   ++  GL T  A YLPW +L   ++ G+    D LG+
Sbjct: 127 IIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWGDFLGM 186

Query: 186 LAGHLYYFLTVLHPLAGGKNILRTPFWIQRL 208
           +AGH YYFL  ++P    +  L+TP +++ L
Sbjct: 187 IAGHAYYFLAFVYPRMTDRRPLKTPSFLKAL 217

The following BLAST results are available for this feature:

BLAST of Clc03G17460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878469.1	5.3e-130	97.52	derlin-1 [Benincasa hispida]	[more]
XP_008450797.1	1.7e-128	96.69	PREDICTED: derlin-1 [Cucumis melo] >TYK10137.1 derlin-1 [Cucumis melo var. makuw...	[more]
XP_004135679.1	2.9e-128	96.28	derlin-1 [Cucumis sativus] >KGN66192.1 hypothetical protein Csa_007006 [Cucumis ...	[more]
XP_022961351.1	2.4e-127	96.68	derlin-1-like [Cucurbita moschata] >XP_023516821.1 derlin-1-like isoform X1 [Cuc...	[more]
KAG7023624.1	5.4e-127	96.27	Derlin-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Clc03G17460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZU9	1.7e-94	68.18	Derlin-1 OS=Arabidopsis thaliana OX=3702 GN=DER1 PE=2 SV=1	[more]
Q06397	1.5e-90	68.05	Derlin-1 OS=Oryza sativa subsp. japonica OX=39947 GN=DER1 PE=2 SV=2	[more]
Q4G2J6	2.2e-86	66.94	Derlin-1.1 OS=Zea mays OX=4577 GN=DER1.1 PE=2 SV=2	[more]
Q4G2J5	3.7e-86	66.12	Derlin-1.2 OS=Zea mays OX=4577 GN=DER1.2 PE=2 SV=1	[more]
Q96Q80	7.6e-39	41.95	Derlin-3 OS=Homo sapiens OX=9606 GN=DERL3 PE=1 SV=2	[more]

BLAST of Clc03G17460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CDT1	8.2e-129	96.69	Derlin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002800 PE=3 SV...	[more]
A0A1S3BQ27	8.2e-129	96.69	Derlin OS=Cucumis melo OX=3656 GN=LOC103492274 PE=3 SV=1	[more]
A0A0A0LZA3	1.4e-128	96.28	Derlin OS=Cucumis sativus OX=3659 GN=Csa_1G575080 PE=3 SV=1	[more]
A0A6J1HA50	1.2e-127	96.68	Derlin OS=Cucurbita moschata OX=3662 GN=LOC111461868 PE=3 SV=1	[more]
A0A6J1JBH3	4.5e-127	96.27	Derlin OS=Cucurbita maxima OX=3661 GN=LOC111485268 PE=3 SV=1	[more]

BLAST of Clc03G17460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29330.1	1.2e-95	68.18	DERLIN-1	[more]
AT4G04860.1	3.4e-34	37.44	DERLIN-2.2	[more]
AT4G21810.1	1.3e-33	36.97	DERLIN-2.1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007599	Derlin	PFAM	PF04511	DER1	coord: 11..201 e-value: 4.5E-47 score: 160.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..242
None	No IPR available	PANTHER	PTHR11009:SF32	DERLIN-1	coord: 1..241
None	No IPR available	PANTHER	PTHR11009	DER1-LIKE PROTEIN, DERLIN	coord: 1..241
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 9..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G17460.1	Clc03G17460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030968	endoplasmic reticulum unfolded protein response
biological_process	GO:0030433	ubiquitin-dependent ERAD pathway
cellular_component	GO:0000839	Hrd1p ubiquitin ligase ERAD-L complex
cellular_component	GO:0030176	integral component of endoplasmic reticulum membrane
molecular_function	GO:0051787	misfolded protein binding
molecular_function	GO:1990381	ubiquitin-specific protease binding