Clc03G17370 (gene) Watermelon (cordophanus) v2

Overview
NameClc03G17370
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionVacuolar protein sorting-associated protein 32-like protein 2
LocationClcChr03: 29675508 .. 29678366 (-)
RNA-Seq ExpressionClc03G17370
SyntenyClc03G17370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTGTGAGTCTGTGACCGATATGAAAACCAACGGCGCTGTCAACGCCGTGAAGAAAAGGGCTATGAAACTTCCTTTCTTTCTCTCTCCCATCCTACACTAAAACAACACGCCTAAGCAAAGCAGAATCTAATTCGCCTATCAACCAGATCTCCCCTTAATTCTTTACTTTCCATTTCTTCACACCCATCGTTCTTCGATTTCCGATCATCGCTTCTCAGGTAAATACTTTTTCATCAATCTTTTGTTTTTCTTTTTTGAGTTTGGTAGTTGACCGTCTTCTTTTTCGATCTGTTTCAATCCCGATTCTGGTCGATTTTCGAGAATTTATCTCTTCTCAGACCAGATATGATTGATTATTTTCTTGCTATTGTTCCAGAAATTCGGAGGTCGGTTCGAATCGCACATAATCCACCATGTCCATGTTCAATAAGCTTTTTGGTAAACCTAAACAGGAGTCTAATGCCCTGGCCACGCTTGATAAATTAAACGAGGTATCATGGTGGCTTGCCTTTATTCAGTATCTTCGAATTGAATTCCCCCAATTTTGTTTATTAGGGATTTCTCGAGTTTTTTTTTAAACCACTAATTTGGCTAAGTATTTCGAATTAGTTGACGCGAATTAGAGGATTTGTCCTAGGCTGAAGGGGATTCTTTTATGCTCTGTAATTTTTCAGACACTTGAAATGCTGGAGAAGAAGGAGAAAGTACTTTTGAAAAAAGCTGCCACAGAGGTTGAGAAGGCTAAAGATTATACCAGAGCAAAGAACAAGCGGGGTATGACTTTAAATTATTCTGGCAGTTCATTATCGAGCAAAACATTTTGGCATTAAGTACTACAAGTCTTGAAATATAGTGATGTGAATGAATTTGCTAACTTGTTGATAATTAAGTCAAGGGTGGCATAGCAATGTAATGTAACGCTATAGGGAATTTAAATTCTTTTTCTTTTTCTCTTTTTGTTAGGGGGCTCTTTGGATTTTATTTATCTATATTTGTTTTCTTTAGTGTAAGCTCTATCTTCTTTTCCTTCTTATGACTTTTTTCCATTTGAACTATTTTGTAAGCTAGAGAGATGGTTCAGAATCTCCGGCCCCTATACGTAGAAAGTACTAAAATATTTCCTAATTTCTAGAATTGTGATATGAAGTTGGATGCTTTCTAGTCAAGGAGATAACTTGTTGATTTGGTTACAGTCAGGTTTTAACCATCCACGTAATTGTAAGTGGTAATTGCTTGTTTTGGCCTTCTTTTATGCCTCTTTGGCAAATTTCAGCTTTTTTGTTAGTTTTGTTTGTTACTTATTCAAATTGGGGATGTGTTTCATTTTCATTGAGTGTGCAAGACGTTCATTTGTTTGTACTTCTTGATTTTGGGGTATCTGCATTTCATTTTTCACATCCCTTATCACAAATTTGTAGAATCCTGTTACCTTCTTATGTTTCAAGTGTTTGTCTTGGGGAAGTTTATGATAGGATCCGTTTGTTTCCACCTTTATATTGGATTTTGCCCAGTCAATTTGCAAGTCAAACTGCAGTTGGCAATTTGGCATCGATGTTAACTATTTTAATTTTGTAGCTGCTATACAATGTTTGAAGAGGAAGAGGCTATATGAACAACAGATAGAGCAGCTCGGCAACTTCCAATTGCGGATTCATGATCAGGTTATCTTTGATGTTATATCTAGTTAGATGTGTCCATGTTTCCTTTTGCTGCGTGTTTATTTAACTTCGTGTGACATAAATCTATCTTTGTGTTGCAGATGATATTACTAGAAGGTGCAAAAGCCACAACTGAGACTGTAGACGCATTGAGGACCGGGGCAGCTGCAATGAAAGCAATGCAGAAAGCAACGTGAGTACCACATTGTTTCAGTGTACTTTGATGATTTATTAATTTTAGATGTTTTGAGTTCGTCCATATTTTTTTCTTCTCTTTCTGACCACCCGAAGATTGTGAGAATCTTTTGAACTATGTGCTGGCAGAGCATAAAGATGCATGACACCTGTGTGTTTCCATTAAAATCTACGAAAGTGAATGGTTTAGTGCTTAACAAGGAGTTTAGATGACGTGGTTGATGATGGAACTTGAAATATTCTCCTTTTGTAGGAATATCGATGATGTGGATAAAACAATGGATGAGATCAATGAACAAACTGAGAACATGAAACAGATCCAAGAAGCACTATCAAATCCAATTGGTGCTGCAGCCGATTTTGACGAGGTTTGTATTCACTTTCAGCTTGTCTTCTCATTTGTACCTGCAATTTTATGAAGTTCATCTACTAGACTTATCTTTGTACGCACAGGATGAACTGGAAGCGGAACTTGAGGAGCTAGAAGGTGCTGAGTTGGAAGAGCAACTTCTTCAACCTGCAACAACTGCTCCTGCTGCTCCAATTCCAGTCCCTGCAGGCCGACAAACTGCTCGACCCGCTCCTCAGAAACGAACTGCTGAAGAAGATGAGCTGGCAGCTCTGCAGGCCGAGATGGCACTTTGATGTGATATCCGACAATGTTCTGAAGCAGGTCCTTGGGTTAATCTCGTGATTAGTTCTTTCCTATTGTCAACAATGAATATCCTACATAATTGTCCTAGGCCTTCTAGATTGTTATGTTTATTCATCATGTGCCTGAAAACATCAAGATTCGTGCATTGTACCCAAATTTGCATCTAGAGCTAAAGCTGCCAAGGCTAAGAGAATTTTATGGAATTTTGCAGGTGGCATTGCCAGATGAGAATTCGAAAGAGAGGCGATGTGAAGAATTGGCCCGATGTTCCGAAGATTTGAACATTTTTTGCTATGTTCAGCAAAGCCTGATGAACAGGTCTCTTTGTGATAATATCAGACAATAA

mRNA sequence

ATGAGCTGTGAGTCTGTGACCGATATGAAAACCAACGGCGCTGTCAACGCCAATCTAATTCGCCTATCAACCAGATCTCCCCTTAATTCTTTACTTTCCATTTCTTCACACCCATCGTTCTTCGATTTCCGATCATCGCTTCTCAGAAATTCGGAGGAGTCTAATGCCCTGGCCACGCTTGATAAATTAAACGAGACACTTGAAATGCTGGAGAAGAAGGAGAAAGTACTTTTGAAAAAAGCTGCCACAGAGGTTGAGAAGGCTAAAGATTATACCAGAGCAAAGAACAAGCGGGCTGCTATACAATGTTTGAAGAGGAAGAGGCTATATGAACAACAGATAGAGCAGCTCGGCAACTTCCAATTGCGGATTCATGATCAGATGATATTACTAGAAGGTGCAAAAGCCACAACTGAGACTGTAGACGCATTGAGGACCGGGGCAGCTGCAATGAAAGCAATGCAGAAAGCAACGAATATCGATGATGTGGATAAAACAATGGATGAGATCAATGAACAAACTGAGAACATGAAACAGATCCAAGAAGCACTATCAAATCCAATTGGTGCTGCAGCCGATTTTGACGAGGATGAACTGGAAGCGGAACTTGAGGAGCTAGAAGGTGCTGAGTTGGAAGAGCAACTTCTTCAACCTGCAACAACTGCTCCTGCTGCTCCAATTCCACTCTGCAGGCCGAGATGGCACTTTGATGTGATATCCGACAATGTTCTGAAGCAGGTGGCATTGCCAGATGAGAATTCGAAAGAGAGGCGATGTGAAGAATTGGCCCGATGTTCCGAAGATTTGAACATTTTTTGCTATGTTCAGCAAAGCCTGATGAACAGGTCTCTTTGTGATAATATCAGACAATAA

Coding sequence (CDS)

ATGAGCTGTGAGTCTGTGACCGATATGAAAACCAACGGCGCTGTCAACGCCAATCTAATTCGCCTATCAACCAGATCTCCCCTTAATTCTTTACTTTCCATTTCTTCACACCCATCGTTCTTCGATTTCCGATCATCGCTTCTCAGAAATTCGGAGGAGTCTAATGCCCTGGCCACGCTTGATAAATTAAACGAGACACTTGAAATGCTGGAGAAGAAGGAGAAAGTACTTTTGAAAAAAGCTGCCACAGAGGTTGAGAAGGCTAAAGATTATACCAGAGCAAAGAACAAGCGGGCTGCTATACAATGTTTGAAGAGGAAGAGGCTATATGAACAACAGATAGAGCAGCTCGGCAACTTCCAATTGCGGATTCATGATCAGATGATATTACTAGAAGGTGCAAAAGCCACAACTGAGACTGTAGACGCATTGAGGACCGGGGCAGCTGCAATGAAAGCAATGCAGAAAGCAACGAATATCGATGATGTGGATAAAACAATGGATGAGATCAATGAACAAACTGAGAACATGAAACAGATCCAAGAAGCACTATCAAATCCAATTGGTGCTGCAGCCGATTTTGACGAGGATGAACTGGAAGCGGAACTTGAGGAGCTAGAAGGTGCTGAGTTGGAAGAGCAACTTCTTCAACCTGCAACAACTGCTCCTGCTGCTCCAATTCCACTCTGCAGGCCGAGATGGCACTTTGATGTGATATCCGACAATGTTCTGAAGCAGGTGGCATTGCCAGATGAGAATTCGAAAGAGAGGCGATGTGAAGAATTGGCCCGATGTTCCGAAGATTTGAACATTTTTTGCTATGTTCAGCAAAGCCTGATGAACAGGTCTCTTTGTGATAATATCAGACAATAA

Protein sequence

MSCESVTDMKTNGAVNANLIRLSTRSPLNSLLSISSHPSFFDFRSSLLRNSEESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPLCRPRWHFDVISDNVLKQVALPDENSKERRCEELARCSEDLNIFCYVQQSLMNRSLCDNIRQ
Homology
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BLAST of Clc03G17370 vs. NCBI nr
Match: KAG6589968.1 (Vacuolar protein sorting-associated protein 32-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 343.2 bits (879), Expect = 2.2e-90
Identity = 191/212 (90.09%), Postives = 197/212 (92.92%), Query Frame = 0 

Query: 35  SSHPSFFDFRSSLLRNSEESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRA 94
           S +    D + S +R S ESNALATLDKLNETLEMLEKKE VLLKKAATEVEKAKDYTRA
Sbjct: 60  SENSPISDHQFSEVRRS-ESNALATLDKLNETLEMLEKKENVLLKKAATEVEKAKDYTRA 119

Query: 95  KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAM 154
           KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAM
Sbjct: 120 KNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAM 179

Query: 155 QKATNIDDVDKTMDEINEQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQ 214
           QKATNIDDVDKTMDEINEQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQ
Sbjct: 180 QKATNIDDVDKTMDEINEQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQ 239

Query: 215 LLQPATTAPAAPIPLCRPRWHFDVISDNVLKQ 247
           LLQPATTAP APIPLC+ RWHFD++S  VLKQ
Sbjct: 240 LLQPATTAPVAPIPLCKLRWHFDLVSVMVLKQ 270

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BLAST of Clc03G17370 vs. NCBI nr
Match: XP_008450809.1 (PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis melo] >XP_008450810.1 PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis melo] >XP_016900986.1 PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis melo] >TYK10128.1 vacuolar protein sorting-associated protein 32-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 318.5 bits (815), Expect = 5.8e-83
Identity = 175/178 (98.31%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +ESNALATLDKLNETLEMLEKKEKVLLKKA+TEVEKAKDYTRAKNKRAAIQCLKRKRLYE
Sbjct: 13  QESNALATLDKLNETLEMLEKKEKVLLKKASTEVEKAKDYTRAKNKRAAIQCLKRKRLYE 72

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
           QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN
Sbjct: 73  QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 132

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPL 230
           EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIP+
Sbjct: 133 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPV 190

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BLAST of Clc03G17370 vs. NCBI nr
Match: XP_038880238.1 (vacuolar protein sorting-associated protein 32 homolog 2 [Benincasa hispida])

HSP 1 Score: 317.0 bits (811), Expect = 1.7e-82
Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +ESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE
Sbjct: 13  QESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 72

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
           QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN
Sbjct: 73  QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 132

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPI 228
           EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPI
Sbjct: 133 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPI 188

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BLAST of Clc03G17370 vs. NCBI nr
Match: XP_022144946.1 (vacuolar protein sorting-associated protein 32 homolog 2 [Momordica charantia] >XP_022144947.1 vacuolar protein sorting-associated protein 32 homolog 2 [Momordica charantia])

HSP 1 Score: 316.2 bits (809), Expect = 2.9e-82
Identity = 174/178 (97.75%), Postives = 177/178 (99.44%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +ES ALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE
Sbjct: 11  QESTALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 70

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
           QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN
Sbjct: 71  QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 130

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPL 230
           EQTENMKQIQEALSNPIGA+ADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIP+
Sbjct: 131 EQTENMKQIQEALSNPIGASADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPV 188

[Close]
BLAST of Clc03G17370 vs. NCBI nr
Match: XP_004135686.1 (vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis sativus] >XP_011659962.1 vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis sativus] >XP_031737801.1 vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis sativus] >KGN66200.1 hypothetical protein Csa_006989 [Cucumis sativus])

HSP 1 Score: 316.2 bits (809), Expect = 2.9e-82
Identity = 174/178 (97.75%), Postives = 177/178 (99.44%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +ESNALATLDKLNETLEMLEKKEKVLLKKA+TEVEKAKDYTRAKNKRAAIQCLKRKRLYE
Sbjct: 13  QESNALATLDKLNETLEMLEKKEKVLLKKASTEVEKAKDYTRAKNKRAAIQCLKRKRLYE 72

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
           QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN
Sbjct: 73  QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 132

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPL 230
           EQTENMKQIQEALSNPIGAAADFDEDELEAELEELE AELEEQLLQPATTAPAAPIP+
Sbjct: 133 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELESAELEEQLLQPATTAPAAPIPV 190

[Close]
BLAST of Clc03G17370 vs. ExPASy Swiss-Prot
Match: Q9SZE4 (Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS32.2 PE=1 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.3e-74
Identity = 153/175 (87.43%), Postives = 164/175 (93.71%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +E+NAL TLDKLNETLEMLEKKEKVLLKKA  EVEKAK+Y+RAKNKRAAIQCLKRKRLYE
Sbjct: 11  QEANALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAIQCLKRKRLYE 70

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
            Q+EQLGNFQLRIHDQMI+LEGAKATTETVDALR+GA+AMKAMQKATNIDDVDKTMDEIN
Sbjct: 71  GQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEIN 130

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAP 227
           EQTENMKQIQEAL+ P+GAAADFDEDEL AEL+ELE  ELE QLLQPATTAP  P
Sbjct: 131 EQTENMKQIQEALATPMGAAADFDEDELAAELDELESEELESQLLQPATTAPPLP 185

[Close]
BLAST of Clc03G17370 vs. ExPASy Swiss-Prot
Match: O82197 (Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS32.1 PE=1 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.5e-70
Identity = 148/167 (88.62%), Postives = 158/167 (94.61%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +E++ L TLDKLNETLEMLEKKE VLLKKA  EVEKAK+++RAKNKRAAIQCLKRKRLYE
Sbjct: 12  QETSTLQTLDKLNETLEMLEKKENVLLKKATGEVEKAKEFSRAKNKRAAIQCLKRKRLYE 71

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
           QQ+EQLGNFQLRIHDQMI+LEGAKATTETVDALRTGA+AMKAMQKATNIDDVDKTMDEIN
Sbjct: 72  QQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDEIN 131

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQP 219
           EQTENMKQIQEALS P G A DFDEDELEAEL+ELEGAELEEQLLQP
Sbjct: 132 EQTENMKQIQEALSAPFG-ANDFDEDELEAELDELEGAELEEQLLQP 177

[Close]
BLAST of Clc03G17370 vs. ExPASy Swiss-Prot
Match: Q5XGW6 (Charged multivesicular body protein 4b OS=Xenopus laevis OX=8355 GN=chmp4b PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.0e-22
Identity = 76/176 (43.18%), Postives = 103/176 (58.52%), Query Frame = 0 

Query: 60  LDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYEQQIEQLGN 119
           + KL +T EML KK++ L KK   E+  AK +   KNKRAA+Q LKRK+ YE+Q+ Q+  
Sbjct: 24  IQKLRDTEEMLAKKQEFLEKKIEQELVTAKKH-GTKNKRAALQALKRKKRYEKQLAQIDG 83

Query: 120 FQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQ 179
               I  Q   LE A   TE +  +   A AMKA     +I+ VD+ M +I +Q E  ++
Sbjct: 84  TLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDIEKVDELMQDIADQQELAQE 143

Query: 180 IQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQ-------PATTAPAAPIP 229
           I +A+S P+G   DFDEDEL AELEELE  EL++ LL+       P    PAA +P
Sbjct: 144 ISDAISKPVGFGEDFDEDELMAELEELEQEELDKNLLEVQGPETVPLPNVPAASLP 198

[Close]
BLAST of Clc03G17370 vs. ExPASy Swiss-Prot
Match: Q7ZVC4 (Charged multivesicular body protein 4b OS=Danio rerio OX=7955 GN=chmp4b PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.7e-22
Identity = 74/180 (41.11%), Postives = 103/180 (57.22%), Query Frame = 0 

Query: 49  RNSEESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKR 108
           +  + ++    + +L ET EML KK++ L KK   E+  AK     KNKRAA+Q LKRK+
Sbjct: 13  KGGKSASPQEAIQRLRETEEMLTKKQEFLEKKIEQELVTAKK-NGTKNKRAALQALKRKK 72

Query: 109 LYEQQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMD 168
            YE+Q+ Q+      I  Q   LE A   TE +  +   A AMKA     +ID VD+ M 
Sbjct: 73  RYEKQLAQIDGTLSTIEFQREALENAHTNTEVIKNMGYAAKAMKAAHDNMDIDKVDELMQ 132

Query: 169 EINEQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIP 228
           +I EQ E  ++I +A+S P+G   +FDEDEL AELEELE  EL++ LL+     P   +P
Sbjct: 133 DIIEQQELAQEISDAISKPVGFGEEFDEDELLAELEELEQEELDKNLLEIGDNVPLPNVP 191

[Close]
BLAST of Clc03G17370 vs. ExPASy Swiss-Prot
Match: Q6GL11 (Charged multivesicular body protein 4b OS=Xenopus tropicalis OX=8364 GN=chmp4b PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.7e-22
Identity = 76/176 (43.18%), Postives = 103/176 (58.52%), Query Frame = 0 

Query: 60  LDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYEQQIEQLGN 119
           + KL +T EML KK++ L KK   E+  AK +   KNKRAA+Q LKRK+ YE+Q+ Q+  
Sbjct: 24  IQKLRDTEEMLTKKQEFLEKKIEQELVTAKKH-GTKNKRAALQALKRKKRYEKQLAQIDG 83

Query: 120 FQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQ 179
               I  Q   LE A   TE +  +   A AMKA     +I+ VD+ M +I +Q E  ++
Sbjct: 84  TLSTIEFQREALENANTNTEVLKNMGFAAKAMKAAHDNMDIEKVDELMQDIADQQELAQE 143

Query: 180 IQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQ-------PATTAPAAPIP 229
           I +A+S P+G   DFDEDEL AELEELE  EL++ LL+       P    PAA +P
Sbjct: 144 ISDAISKPVGFGEDFDEDELMAELEELEQEELDKNLLEVQGPETVPLPNVPAAVLP 198

[Close]
BLAST of Clc03G17370 vs. ExPASy TrEMBL
Match: A0A1S3BQS1 (vacuolar protein sorting-associated protein 32 homolog 2 OS=Cucumis melo OX=3656 GN=LOC103492284 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.8e-83
Identity = 175/178 (98.31%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +ESNALATLDKLNETLEMLEKKEKVLLKKA+TEVEKAKDYTRAKNKRAAIQCLKRKRLYE
Sbjct: 13  QESNALATLDKLNETLEMLEKKEKVLLKKASTEVEKAKDYTRAKNKRAAIQCLKRKRLYE 72

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
           QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN
Sbjct: 73  QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 132

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPL 230
           EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIP+
Sbjct: 133 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPV 190

[Close]
BLAST of Clc03G17370 vs. ExPASy TrEMBL
Match: A0A5D3CFX2 (Vacuolar protein sorting-associated protein 32-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002710 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.8e-83
Identity = 175/178 (98.31%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +ESNALATLDKLNETLEMLEKKEKVLLKKA+TEVEKAKDYTRAKNKRAAIQCLKRKRLYE
Sbjct: 13  QESNALATLDKLNETLEMLEKKEKVLLKKASTEVEKAKDYTRAKNKRAAIQCLKRKRLYE 72

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
           QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN
Sbjct: 73  QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 132

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPL 230
           EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIP+
Sbjct: 133 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPV 190

[Close]
BLAST of Clc03G17370 vs. ExPASy TrEMBL
Match: A0A6J1JBI2 (vacuolar protein sorting-associated protein 32 homolog 2-like OS=Cucurbita maxima OX=3661 GN=LOC111485275 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.4e-82
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +ESNALATLDKLNETLEMLEKKE VLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE
Sbjct: 13  QESNALATLDKLNETLEMLEKKENVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 72

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
           QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN
Sbjct: 73  QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 132

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPL 230
           EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAP APIP+
Sbjct: 133 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPVAPIPV 190

[Close]
BLAST of Clc03G17370 vs. ExPASy TrEMBL
Match: A0A6J1CUX2 (vacuolar protein sorting-associated protein 32 homolog 2 OS=Momordica charantia OX=3673 GN=LOC111014495 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.4e-82
Identity = 174/178 (97.75%), Postives = 177/178 (99.44%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +ES ALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE
Sbjct: 11  QESTALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 70

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
           QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN
Sbjct: 71  QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 130

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPL 230
           EQTENMKQIQEALSNPIGA+ADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIP+
Sbjct: 131 EQTENMKQIQEALSNPIGASADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPV 188

[Close]
BLAST of Clc03G17370 vs. ExPASy TrEMBL
Match: A0A6J1H9T9 (vacuolar protein sorting-associated protein 32 homolog 2-like OS=Cucurbita moschata OX=3662 GN=LOC111461810 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 1.4e-82
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +ESNALATLDKLNETLEMLEKKE VLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE
Sbjct: 13  QESNALATLDKLNETLEMLEKKENVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 72

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
           QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN
Sbjct: 73  QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 132

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAPIPL 230
           EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAP APIP+
Sbjct: 133 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPVAPIPV 190

[Close]
BLAST of Clc03G17370 vs. TAIR 10
Match: AT4G29160.1 (SNF7 family protein )

HSP 1 Score: 281.2 bits (718), Expect = 9.5e-76
Identity = 153/175 (87.43%), Postives = 164/175 (93.71%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +E+NAL TLDKLNETLEMLEKKEKVLLKKA  EVEKAK+Y+RAKNKRAAIQCLKRKRLYE
Sbjct: 11  QEANALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAIQCLKRKRLYE 70

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
            Q+EQLGNFQLRIHDQMI+LEGAKATTETVDALR+GA+AMKAMQKATNIDDVDKTMDEIN
Sbjct: 71  GQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEIN 130

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAP 227
           EQTENMKQIQEAL+ P+GAAADFDEDEL AEL+ELE  ELE QLLQPATTAP  P
Sbjct: 131 EQTENMKQIQEALATPMGAAADFDEDELAAELDELESEELESQLLQPATTAPPLP 185

[Close]
BLAST of Clc03G17370 vs. TAIR 10
Match: AT4G29160.3 (SNF7 family protein )

HSP 1 Score: 281.2 bits (718), Expect = 9.5e-76
Identity = 153/175 (87.43%), Postives = 164/175 (93.71%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +E+NAL TLDKLNETLEMLEKKEKVLLKKA  EVEKAK+Y+RAKNKRAAIQCLKRKRLYE
Sbjct: 11  QEANALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAIQCLKRKRLYE 70

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
            Q+EQLGNFQLRIHDQMI+LEGAKATTETVDALR+GA+AMKAMQKATNIDDVDKTMDEIN
Sbjct: 71  GQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEIN 130

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAP 227
           EQTENMKQIQEAL+ P+GAAADFDEDEL AEL+ELE  ELE QLLQPATTAP  P
Sbjct: 131 EQTENMKQIQEALATPMGAAADFDEDELAAELDELESEELESQLLQPATTAPPLP 185

[Close]
BLAST of Clc03G17370 vs. TAIR 10
Match: AT2G19830.1 (SNF7 family protein )

HSP 1 Score: 266.2 bits (679), Expect = 3.2e-71
Identity = 148/167 (88.62%), Postives = 158/167 (94.61%), Query Frame = 0 

Query: 52  EESNALATLDKLNETLEMLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYE 111
           +E++ L TLDKLNETLEMLEKKE VLLKKA  EVEKAK+++RAKNKRAAIQCLKRKRLYE
Sbjct: 12  QETSTLQTLDKLNETLEMLEKKENVLLKKATGEVEKAKEFSRAKNKRAAIQCLKRKRLYE 71

Query: 112 QQIEQLGNFQLRIHDQMILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEIN 171
           QQ+EQLGNFQLRIHDQMI+LEGAKATTETVDALRTGA+AMKAMQKATNIDDVDKTMDEIN
Sbjct: 72  QQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQKATNIDDVDKTMDEIN 131

Query: 172 EQTENMKQIQEALSNPIGAAADFDEDELEAELEELEGAELEEQLLQP 219
           EQTENMKQIQEALS P G A DFDEDELEAEL+ELEGAELEEQLLQP
Sbjct: 132 EQTENMKQIQEALSAPFG-ANDFDEDELEAELDELEGAELEEQLLQP 177

[Close]
BLAST of Clc03G17370 vs. TAIR 10
Match: AT4G29160.2 (SNF7 family protein )

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-68
Identity = 139/158 (87.97%), Postives = 148/158 (93.67%), Query Frame = 0 

Query: 69  MLEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQM 128
           MLEKKEKVLLKKA  EVEKAK+Y+RAKNKRAAIQCLKRKRLYE Q+EQLGNFQLRIHDQM
Sbjct: 1   MLEKKEKVLLKKAGAEVEKAKEYSRAKNKRAAIQCLKRKRLYEGQVEQLGNFQLRIHDQM 60

Query: 129 ILLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSNPI 188
           I+LEGAKATTETVDALR+GA+AMKAMQKATNIDDVDKTMDEINEQTENMKQIQEAL+ P+
Sbjct: 61  IMLEGAKATTETVDALRSGASAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALATPM 120

Query: 189 GAAADFDEDELEAELEELEGAELEEQLLQPATTAPAAP 227
           GAAADFDEDEL AEL+ELE  ELE QLLQPATTAP  P
Sbjct: 121 GAAADFDEDELAAELDELESEELESQLLQPATTAPPLP 158

[Close]
BLAST of Clc03G17370 vs. TAIR 10
Match: AT5G09260.1 (vacuolar protein sorting-associated protein 20.2 )

HSP 1 Score: 56.2 bits (134), Expect = 5.0e-08
Identity = 44/152 (28.95%), Postives = 76/152 (50.00%), Query Frame = 0 

Query: 70  LEKKEKVLLKKAATEVEKAKDYTRAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMI 129
           L + ++ L K    E + A+D  R K K  A+  LK+KR  E+ ++Q+  + + +  Q+ 
Sbjct: 28  LGQYQQQLEKVIEAEKQAARDLIREKRKDRALLALKKKRTQEELLKQVDQWLINVEQQLA 87

Query: 130 LLEGAKATTETVDALRTGAAAMKAMQKATNIDDVDKTMDEINEQTENMKQIQEALSNPIG 189
            +E         ++L+ G  A+KA+Q   N+DDV K MD+  E      ++   L   + 
Sbjct: 88  DIELTSKQKAVFESLKQGNNAIKAIQSEVNLDDVQKLMDDTAEAKAYQDELSAILGEKLS 147

Query: 190 AAADFDEDELEAELEELEGAELEEQLLQPATT 222
           A    DE+E+ AE + LE   + E + +  TT
Sbjct: 148 AE---DEEEILAEFDNLESLLIVEDMPEVPTT 176

The following BLAST results are available for this feature:
BLAST of Clc03G17370 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589968.12.2e-9090.09Vacuolar protein sorting-associated protein 32-like 1, partial [Cucurbita argyro... [more]
XP_008450809.15.8e-8398.31PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis mel... [more]
XP_038880238.11.7e-8299.43vacuolar protein sorting-associated protein 32 homolog 2 [Benincasa hispida][more]
XP_022144946.12.9e-8297.75vacuolar protein sorting-associated protein 32 homolog 2 [Momordica charantia] >... [more]
XP_004135686.12.9e-8297.75vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis sativus] >XP_0... [more]
BLAST of Clc03G17370 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZE41.3e-7487.43Vacuolar protein sorting-associated protein 32 homolog 2 OS=Arabidopsis thaliana... [more]
O821974.5e-7088.62Vacuolar protein sorting-associated protein 32 homolog 1 OS=Arabidopsis thaliana... [more]
Q5XGW62.0e-2243.18Charged multivesicular body protein 4b OS=Xenopus laevis OX=8355 GN=chmp4b PE=2 ... [more]
Q7ZVC42.7e-2241.11Charged multivesicular body protein 4b OS=Danio rerio OX=7955 GN=chmp4b PE=2 SV=... [more]
Q6GL112.7e-2243.18Charged multivesicular body protein 4b OS=Xenopus tropicalis OX=8364 GN=chmp4b P... [more]
BLAST of Clc03G17370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BQS12.8e-8398.31vacuolar protein sorting-associated protein 32 homolog 2 OS=Cucumis melo OX=3656... [more]
A0A5D3CFX22.8e-8398.31Vacuolar protein sorting-associated protein 32-like protein 2 OS=Cucumis melo va... [more]
A0A6J1JBI21.4e-8297.75vacuolar protein sorting-associated protein 32 homolog 2-like OS=Cucurbita maxim... [more]
A0A6J1CUX21.4e-8297.75vacuolar protein sorting-associated protein 32 homolog 2 OS=Momordica charantia ... [more]
A0A6J1H9T91.4e-8297.75vacuolar protein sorting-associated protein 32 homolog 2-like OS=Cucurbita mosch... [more]
BLAST of Clc03G17370 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G29160.19.5e-7687.43SNF7 family protein [more]
AT4G29160.39.5e-7687.43SNF7 family protein [more]
AT2G19830.13.2e-7188.62SNF7 family protein [more]
AT4G29160.23.3e-6887.97SNF7 family protein [more]
AT5G09260.15.0e-0828.95vacuolar protein sorting-associated protein 20.2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 192..216
NoneNo IPR availableCOILSCoilCoilcoord: 163..183
NoneNo IPR availableCOILSCoilCoilcoord: 53..80
NoneNo IPR availableGENE3D6.10.250.1710coord: 158..212
e-value: 5.6E-9
score: 37.7
NoneNo IPR availableGENE3D1.10.287.1060coord: 55..132
e-value: 6.5E-21
score: 76.2
NoneNo IPR availablePANTHERPTHR22761CHARGED MULTIVESICULAR BODY PROTEINcoord: 49..231
NoneNo IPR availablePANTHERPTHR22761:SF53VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 2-LIKEcoord: 49..231
IPR005024Snf7 familyPFAMPF03357Snf7coord: 61..226
e-value: 1.1E-45
score: 155.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc03G17370.1Clc03G17370.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway
biological_process GO:0006900 vesicle budding from membrane
biological_process GO:0007034 vacuolar transport
cellular_component GO:0009898 cytoplasmic side of plasma membrane
cellular_component GO:0000815 ESCRT III complex
cellular_component GO:0005771 multivesicular body