Clc03G17310 (gene) Watermelon (cordophanus) v2

Overview
NameClc03G17310
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionHelicase ATP-binding domain-containing protein
LocationClcChr03: 29617406 .. 29619880 (-)
RNA-Seq ExpressionClc03G17310
SyntenyClc03G17310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACGTGAACTCACATTCGGAGTCTCATCAATTCGTAATGGGTGAGAACTTGAAATCGCAAATGGACAATTTAACGTTGATTAGTGATTTATGAGGTTACTTTTCATTAGTTTTAGAATTCGGGTTATTTGACGTTAGCACAACCAAATTTGGTCTAAAAATTATAGACCCTTATTTTCAAAATCTTGGTCAAGTACGCCACTAGTTTTTTTGTTTTTGTTAGGTGCCGAAGGTGGTGGCTCAGTCGAAGTTGAAATGGCGATCAAGAAGTTAGCTAGAATTTTGATGAAATCTCGGGATGATGCGGTGTCTCTTCCCACTCGGGATGATCCTTCCTTTGACAATTCCCGTCCCATCGACAGCCAAGGTAATCGATCCTCTCTGAAGTTCTTTCTGAGACGTTTTTTTAAACCCTAATTCGGTGTTTGATTTACAGTGCAAGAGGAGATGGTTCGTTCGTTCGAAAGGGCAAATGATCAACAGAGTCTTTTATGGAGGGTATCGTACTATCCTATGATTTTCCTGATTTTATTTTATCTTTAAGAAAATTAGGGATTCTCATGTCTGATTGTTATTCTCTTTGACTGACTGTTCATCAGACTGTGTTTGCGGTGTTTCTCTTTTGCTTCGCGGCTTTTCTTCTTTACTCAATCGTTCAGCAGGTTTCTTCTCCATGGGAACTGGTATGTCAATTTTGCTGAGAATCTTATTCAATTGCTATCATGAAATGATGAAATTTCATTGTTTTACTTCTATATCCTGTTAGTCACGGACACAGTATTTGTAAAGGATGCATTGAGTTTATGTTCTTGGCTCCATCGTTTGCATCATACAAATGTGCAACTTTTCATACTTTTGATTTTTCTTCTGCAGCGTTATCATGCTTACTTCATGGAGGATGTTGACTCATGGATGGTTATAGCTGCAGGTTTTTCTTTCAAAGTTCTCCAGTAGTTTCTAATCATTACTCCAATTTGTTTCAATCGTACAATTTTATGGCGAAGTTCATTTTTTATTTTGGATAAACCACAACGGTTTTTGGACAATATTGCAATACAAAATGGGGCCACTCATATCCAAACATTCCAATGGCCAAGTTCATTTCCTTGTTTTATTGCTGCTGATAAATGCGTTAGATGTATTATCCTGCTAATGTTGGAAGTTTGTTGAACTGTAGTCACCATTTCTTTAGTTATGCTGTCACGTCATGTTTGGGATCTTGCTAATGTCAACAATTGAAAATTCTACAGATTGGATAGCTATTTTAGCTTGTACATTTTCGATCATTGGGATTGCGAGCAAGTCAAATTACCACCGGCGATGGCTTTGGTGCTCATTCTTTATTGGCATCCTACTCTCAGTTTTCTGGCTATATTTCATGATGAGGTATGGTAGGAAAATTCATAATCTTATTATCAAAGTTATGCTTCTAACTGAAGATGTGTAGGGTATGACTTTTGATCTTTCTTTTCTCCTCGTTTGTTGTTAGGTACAAATACTCTGTTTTGGAAGTCTTACCCTTTTTCTGATAGACCCCCAATTACTAAGATGTCTATACACATTAGCGAATGAAGAGGGGTGTAGTTACGTCAGAAAAGAATGCGTGTATGTGGTGCGGGCTGAGAAATTTTGTTATTTACAAAAGGGCCATGGTGGCAGGGTACTAAAGGGTGTGTGCTTGCTTGGGGAGAGGGTATATGTATGCAAATACACATATCTCTCTCCTGGCAAGATGAGAGTTTCGTTGCTGAAATATACAAAATAATAATAATAATAATAATAATAAAACAGGACAAAGACCTGTTTCCAACTAAGCAAGTCAGTTGAGTTACTAACTTACAAGAGGGTTCCCTCTTGTAGTAATAGAAGAGATAGAATAAGCAAAGTATAAGTTAGTCTAATAGAATCCAAATATATTGAAATATAAATGATAATGAAATTACCAGATAAATAAGTTTTCAAGGTATTTGGACCCTTCCAATCTTGAGATCACGCCCAAGCCCTAATTCAGTCACCAAAATATTGCCTATTTTCTCCATTCCTCTCCCCCTCTATTTATAAAGTATAACAAACTCCTTAGCTAAAAGTACTAATATACCGTTGATACTCTAATAACACCCTAATACCCTTCTTATCATAGTCGTAATCCACAAGAGACTGTTTCATTGCTTGGTGATACTTGTTTGTTGCCTCTTTATGAATTTACAATATGTCATGTTGCATTTTGATTGCAGTTTGCCTAGGTTTCGTTGGGATGTTATCTGGCGTCCTTTCGGGCCTCTCAGGTAGTTTTTGGAAAATGATAATTGATTATTTCACTTTGTATTGTACTATGAAACTCACTGTGTGTTCATATGATTCTGTTTATTGCAGTGGGTCTGGAATCTGTTTGTATGTAGATCATTTGCTAGCCGAATCGACTGAGGAAATACGAAAACTTAGAGGCTATATGTATTCTTACAAAGCTAACTGA

mRNA sequence

ATGAACGTGAACTCACATTCGGAGTCTCATCAATTCGTAATGGGTGCCGAAGGTGGTGGCTCAGTCGAAGTTGAAATGGCGATCAAGAAGTTAGCTAGAATTTTGATGAAATCTCGGGATGATGCGGTGTCTCTTCCCACTCGGGATGATCCTTCCTTTGACAATTCCCGTCCCATCGACAGCCAAGTGCAAGAGGAGATGGTTCGTTCGTTCGAAAGGGCAAATGATCAACAGAGTCTTTTATGGAGGACTGTGTTTGCGGTGTTTCTCTTTTGCTTCGCGGCTTTTCTTCTTTACTCAATCGTTCAGCAGGTTTCTTCTCCATGGGAACTGCGTTATCATGCTTACTTCATGGAGGATGTTGACTCATGGATGGTTATAGCTGCAGATTGGATAGCTATTTTAGCTTGTACATTTTCGATCATTGGGATTGCGAGCAAGTCAAATTACCACCGGCGATGGCTTTGGTGCTCATTCTTTATTGGCATCCTACTCTCAGTTTTCTGGCTATATTTCATGATGAGTTTGCCTAGGTTTCGTTGGGATGTTATCTGGCGTCCTTTCGGGCCTCTCAGTGGGTCTGGAATCTGTTTGTATGTAGATCATTTGCTAGCCGAATCGACTGAGGAAATACGAAAACTTAGAGGCTATATGTATTCTTACAAAGCTAACTGA

Coding sequence (CDS)

ATGAACGTGAACTCACATTCGGAGTCTCATCAATTCGTAATGGGTGCCGAAGGTGGTGGCTCAGTCGAAGTTGAAATGGCGATCAAGAAGTTAGCTAGAATTTTGATGAAATCTCGGGATGATGCGGTGTCTCTTCCCACTCGGGATGATCCTTCCTTTGACAATTCCCGTCCCATCGACAGCCAAGTGCAAGAGGAGATGGTTCGTTCGTTCGAAAGGGCAAATGATCAACAGAGTCTTTTATGGAGGACTGTGTTTGCGGTGTTTCTCTTTTGCTTCGCGGCTTTTCTTCTTTACTCAATCGTTCAGCAGGTTTCTTCTCCATGGGAACTGCGTTATCATGCTTACTTCATGGAGGATGTTGACTCATGGATGGTTATAGCTGCAGATTGGATAGCTATTTTAGCTTGTACATTTTCGATCATTGGGATTGCGAGCAAGTCAAATTACCACCGGCGATGGCTTTGGTGCTCATTCTTTATTGGCATCCTACTCTCAGTTTTCTGGCTATATTTCATGATGAGTTTGCCTAGGTTTCGTTGGGATGTTATCTGGCGTCCTTTCGGGCCTCTCAGTGGGTCTGGAATCTGTTTGTATGTAGATCATTTGCTAGCCGAATCGACTGAGGAAATACGAAAACTTAGAGGCTATATGTATTCTTACAAAGCTAACTGA

Protein sequence

MNVNSHSESHQFVMGAEGGGSVEVEMAIKKLARILMKSRDDAVSLPTRDDPSFDNSRPIDSQVQEEMVRSFERANDQQSLLWRTVFAVFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMVIAADWIAILACTFSIIGIASKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGSGICLYVDHLLAESTEEIRKLRGYMYSYKAN
Homology
[Close]
BLAST of Clc03G17310 vs. NCBI nr
Match: XP_038880203.1 (uncharacterized protein LOC120071865 isoform X2 [Benincasa hispida])

HSP 1 Score: 390.2 bits (1001), Expect = 1.2e-104
Identity = 187/199 (93.97%), Postives = 194/199 (97.49%), Query Frame = 0 

Query: 26  MAIKKLARILMKSRDDAVSLPTRDDPSFDNSRPIDSQVQEEMVRSFERANDQQSLLWRTV 85
           MAIKKLARILMKSRD+ VSLPTRDDPS D+ RPIDSQ QEEMVRSFERANDQQSLLWRTV
Sbjct: 1   MAIKKLARILMKSRDNTVSLPTRDDPSLDDFRPIDSQAQEEMVRSFERANDQQSLLWRTV 60

Query: 86  FAVFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMVIAADWIAILACTFSIIGIA 145
           FAVFLFC+AAFLLYSIVQQVSSPWELRYHAYFMEDVDSWM+IAADW+AILACTFSI+GI 
Sbjct: 61  FAVFLFCYAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMIIAADWVAILACTFSIVGIV 120

Query: 146 SKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGSGICLYVDHLLA 205
           SKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSG+GICLYVDHLLA
Sbjct: 121 SKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGTGICLYVDHLLA 180

Query: 206 ESTEEIRKLRGYMYSYKAN 225
           ESTEEIRKLRGYMYSYKAN
Sbjct: 181 ESTEEIRKLRGYMYSYKAN 199

[Close]
BLAST of Clc03G17310 vs. NCBI nr
Match: KAG6588018.1 (hypothetical protein SDJN03_16583, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 380.6 bits (976), Expect = 9.6e-102
Identity = 180/199 (90.45%), Postives = 191/199 (95.98%), Query Frame = 0 

Query: 26  MAIKKLARILMKSRDDAVSLPTRDDPSFDNSRPIDSQVQEEMVRSFERANDQQSLLWRTV 85
           MAIKKLAR+LMKSR+D +SLPTRDDPS D+SRPIDSQ QEEMVRSFERANDQQSLLWRTV
Sbjct: 1   MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRTV 60

Query: 86  FAVFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMVIAADWIAILACTFSIIGIA 145
           FA FLFCFA FLLYSI+QQVSSPWELRYHAYFMEDV SWM+IAADW+AILAC+FSIIGI 
Sbjct: 61  FAAFLFCFAIFLLYSIIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIV 120

Query: 146 SKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGSGICLYVDHLLA 205
           SKSNYHRRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFGPLSG+GICLYVDHLLA
Sbjct: 121 SKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYVDHLLA 180

Query: 206 ESTEEIRKLRGYMYSYKAN 225
           ES+EEIRKLRGYMYSYKAN
Sbjct: 181 ESSEEIRKLRGYMYSYKAN 199

[Close]
BLAST of Clc03G17310 vs. NCBI nr
Match: XP_008450815.1 (PREDICTED: uncharacterized protein LOC103492288 isoform X2 [Cucumis melo] >TYK10123.1 uncharacterized protein E5676_scaffold16G002660 [Cucumis melo var. makuwa])

HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101
Identity = 180/199 (90.45%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 26  MAIKKLARILMKSRDDAVSLPTRDDPSFDNSRPIDSQVQEEMVRSFERANDQQSLLWRTV 85
           MAIKKLARILMKSRDD VSLPTRDDPSFD+ RPID+QVQEEMVRSFERANDQQSLLWRTV
Sbjct: 1   MAIKKLARILMKSRDDEVSLPTRDDPSFDDYRPIDTQVQEEMVRSFERANDQQSLLWRTV 60

Query: 86  FAVFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMVIAADWIAILACTFSIIGIA 145
           FAVFLFC+A FLLYSI+QQ+SSPWELRYHAYFMEDVDSWM+IAADW+AILACTFSI+GI 
Sbjct: 61  FAVFLFCYAGFLLYSILQQISSPWELRYHAYFMEDVDSWMIIAADWVAILACTFSIVGIV 120

Query: 146 SKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGSGICLYVDHLLA 205
           SKS++HRRWLWCSFFIGILLSVFW YFMMSLPRFRWDVIW PFGPLSG+GICLYVDHLL 
Sbjct: 121 SKSSHHRRWLWCSFFIGILLSVFWFYFMMSLPRFRWDVIWLPFGPLSGAGICLYVDHLLT 180

Query: 206 ESTEEIRKLRGYMYSYKAN 225
           ES+EEIRKLRGYMYSYKAN
Sbjct: 181 ESSEEIRKLRGYMYSYKAN 199

[Close]
BLAST of Clc03G17310 vs. NCBI nr
Match: XP_022927992.1 (uncharacterized protein LOC111434892 [Cucurbita moschata])

HSP 1 Score: 378.6 bits (971), Expect = 3.6e-101
Identity = 179/199 (89.95%), Postives = 190/199 (95.48%), Query Frame = 0 

Query: 26  MAIKKLARILMKSRDDAVSLPTRDDPSFDNSRPIDSQVQEEMVRSFERANDQQSLLWRTV 85
           MAIKKLAR+LMKSR+D +SLPTRDDPS D+SRPIDSQ QEEMVRSFERANDQQSLLWRTV
Sbjct: 1   MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRTV 60

Query: 86  FAVFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMVIAADWIAILACTFSIIGIA 145
           FA FLFCFA FLLYSI+ QVSSPWELRYHAYFMEDV SWM+IAADW+AILAC+FSIIGI 
Sbjct: 61  FAAFLFCFAIFLLYSIIHQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIV 120

Query: 146 SKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGSGICLYVDHLLA 205
           SKSNYHRRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFGPLSG+GICLYVDHLLA
Sbjct: 121 SKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYVDHLLA 180

Query: 206 ESTEEIRKLRGYMYSYKAN 225
           ES+EEIRKLRGYMYSYKAN
Sbjct: 181 ESSEEIRKLRGYMYSYKAN 199

[Close]
BLAST of Clc03G17310 vs. NCBI nr
Match: XP_023002535.1 (uncharacterized protein LOC111496345 [Cucurbita maxima])

HSP 1 Score: 377.9 bits (969), Expect = 6.2e-101
Identity = 179/199 (89.95%), Postives = 190/199 (95.48%), Query Frame = 0 

Query: 26  MAIKKLARILMKSRDDAVSLPTRDDPSFDNSRPIDSQVQEEMVRSFERANDQQSLLWRTV 85
           MAIKKLAR+LMKSR+D +SLPTRDDPS D+SRPIDSQ QEEMVRSFERANDQQSLLWRTV
Sbjct: 1   MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRTV 60

Query: 86  FAVFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMVIAADWIAILACTFSIIGIA 145
           FA FLFCFA FLLYSI+QQVSSPWELRYHAYFMEDV SWM+IAADW+AILAC+FSIIGI 
Sbjct: 61  FAAFLFCFAVFLLYSIIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIV 120

Query: 146 SKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGSGICLYVDHLLA 205
           SKSNYHRRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFG LSG+GICLYVDHLLA
Sbjct: 121 SKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGTLSGAGICLYVDHLLA 180

Query: 206 ESTEEIRKLRGYMYSYKAN 225
           ES+EEIRKLRGYMYSYKAN
Sbjct: 181 ESSEEIRKLRGYMYSYKAN 199

[Close]
BLAST of Clc03G17310 vs. ExPASy TrEMBL
Match: A0A5D3CE29 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002660 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.1e-102
Identity = 180/199 (90.45%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 26  MAIKKLARILMKSRDDAVSLPTRDDPSFDNSRPIDSQVQEEMVRSFERANDQQSLLWRTV 85
           MAIKKLARILMKSRDD VSLPTRDDPSFD+ RPID+QVQEEMVRSFERANDQQSLLWRTV
Sbjct: 1   MAIKKLARILMKSRDDEVSLPTRDDPSFDDYRPIDTQVQEEMVRSFERANDQQSLLWRTV 60

Query: 86  FAVFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMVIAADWIAILACTFSIIGIA 145
           FAVFLFC+A FLLYSI+QQ+SSPWELRYHAYFMEDVDSWM+IAADW+AILACTFSI+GI 
Sbjct: 61  FAVFLFCYAGFLLYSILQQISSPWELRYHAYFMEDVDSWMIIAADWVAILACTFSIVGIV 120

Query: 146 SKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGSGICLYVDHLLA 205
           SKS++HRRWLWCSFFIGILLSVFW YFMMSLPRFRWDVIW PFGPLSG+GICLYVDHLL 
Sbjct: 121 SKSSHHRRWLWCSFFIGILLSVFWFYFMMSLPRFRWDVIWLPFGPLSGAGICLYVDHLLT 180

Query: 206 ESTEEIRKLRGYMYSYKAN 225
           ES+EEIRKLRGYMYSYKAN
Sbjct: 181 ESSEEIRKLRGYMYSYKAN 199

[Close]
BLAST of Clc03G17310 vs. ExPASy TrEMBL
Match: A0A1S3BQS5 (uncharacterized protein LOC103492288 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492288 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.1e-102
Identity = 180/199 (90.45%), Postives = 192/199 (96.48%), Query Frame = 0 

Query: 26  MAIKKLARILMKSRDDAVSLPTRDDPSFDNSRPIDSQVQEEMVRSFERANDQQSLLWRTV 85
           MAIKKLARILMKSRDD VSLPTRDDPSFD+ RPID+QVQEEMVRSFERANDQQSLLWRTV
Sbjct: 1   MAIKKLARILMKSRDDEVSLPTRDDPSFDDYRPIDTQVQEEMVRSFERANDQQSLLWRTV 60

Query: 86  FAVFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMVIAADWIAILACTFSIIGIA 145
           FAVFLFC+A FLLYSI+QQ+SSPWELRYHAYFMEDVDSWM+IAADW+AILACTFSI+GI 
Sbjct: 61  FAVFLFCYAGFLLYSILQQISSPWELRYHAYFMEDVDSWMIIAADWVAILACTFSIVGIV 120

Query: 146 SKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGSGICLYVDHLLA 205
           SKS++HRRWLWCSFFIGILLSVFW YFMMSLPRFRWDVIW PFGPLSG+GICLYVDHLL 
Sbjct: 121 SKSSHHRRWLWCSFFIGILLSVFWFYFMMSLPRFRWDVIWLPFGPLSGAGICLYVDHLLT 180

Query: 206 ESTEEIRKLRGYMYSYKAN 225
           ES+EEIRKLRGYMYSYKAN
Sbjct: 181 ESSEEIRKLRGYMYSYKAN 199

[Close]
BLAST of Clc03G17310 vs. ExPASy TrEMBL
Match: A0A6J1EIP3 (uncharacterized protein LOC111434892 OS=Cucurbita moschata OX=3662 GN=LOC111434892 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 179/199 (89.95%), Postives = 190/199 (95.48%), Query Frame = 0 

Query: 26  MAIKKLARILMKSRDDAVSLPTRDDPSFDNSRPIDSQVQEEMVRSFERANDQQSLLWRTV 85
           MAIKKLAR+LMKSR+D +SLPTRDDPS D+SRPIDSQ QEEMVRSFERANDQQSLLWRTV
Sbjct: 1   MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRTV 60

Query: 86  FAVFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMVIAADWIAILACTFSIIGIA 145
           FA FLFCFA FLLYSI+ QVSSPWELRYHAYFMEDV SWM+IAADW+AILAC+FSIIGI 
Sbjct: 61  FAAFLFCFAIFLLYSIIHQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIV 120

Query: 146 SKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGSGICLYVDHLLA 205
           SKSNYHRRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFGPLSG+GICLYVDHLLA
Sbjct: 121 SKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGPLSGAGICLYVDHLLA 180

Query: 206 ESTEEIRKLRGYMYSYKAN 225
           ES+EEIRKLRGYMYSYKAN
Sbjct: 181 ESSEEIRKLRGYMYSYKAN 199

[Close]
BLAST of Clc03G17310 vs. ExPASy TrEMBL
Match: A0A6J1KP79 (uncharacterized protein LOC111496345 OS=Cucurbita maxima OX=3661 GN=LOC111496345 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.0e-101
Identity = 179/199 (89.95%), Postives = 190/199 (95.48%), Query Frame = 0 

Query: 26  MAIKKLARILMKSRDDAVSLPTRDDPSFDNSRPIDSQVQEEMVRSFERANDQQSLLWRTV 85
           MAIKKLAR+LMKSR+D +SLPTRDDPS D+SRPIDSQ QEEMVRSFERANDQQSLLWRTV
Sbjct: 1   MAIKKLARVLMKSREDGLSLPTRDDPSIDDSRPIDSQAQEEMVRSFERANDQQSLLWRTV 60

Query: 86  FAVFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMVIAADWIAILACTFSIIGIA 145
           FA FLFCFA FLLYSI+QQVSSPWELRYHAYFMEDV SWM+IAADW+AILAC+FSIIGI 
Sbjct: 61  FAAFLFCFAVFLLYSIIQQVSSPWELRYHAYFMEDVSSWMIIAADWVAILACSFSIIGIV 120

Query: 146 SKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGSGICLYVDHLLA 205
           SKSNYHRRWLWCSFFIG LLSVFWLYFM+SLPRFRWDVIWRPFG LSG+GICLYVDHLLA
Sbjct: 121 SKSNYHRRWLWCSFFIGFLLSVFWLYFMISLPRFRWDVIWRPFGTLSGAGICLYVDHLLA 180

Query: 206 ESTEEIRKLRGYMYSYKAN 225
           ES+EEIRKLRGYMYSYKAN
Sbjct: 181 ESSEEIRKLRGYMYSYKAN 199

[Close]
BLAST of Clc03G17310 vs. ExPASy TrEMBL
Match: A0A0A0LYS6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580190 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.3e-100
Identity = 179/199 (89.95%), Postives = 190/199 (95.48%), Query Frame = 0 

Query: 26  MAIKKLARILMKSRDDAVSLPTRDDPSFDNSRPIDSQVQEEMVRSFERANDQQSLLWRTV 85
           MAIKKLARILMKSRD  VSLPTRDDPSFD+SRPIDSQVQEEMVRS ERANDQQS+LWRTV
Sbjct: 1   MAIKKLARILMKSRDHDVSLPTRDDPSFDDSRPIDSQVQEEMVRSLERANDQQSVLWRTV 60

Query: 86  FAVFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMVIAADWIAILACTFSIIGIA 145
           FAVFLFC+A FLLYSI QQ+SSPWELRYHAYFMEDVDSWM+IAADW+AILACTFSIIGI 
Sbjct: 61  FAVFLFCYAGFLLYSIRQQISSPWELRYHAYFMEDVDSWMIIAADWVAILACTFSIIGIV 120

Query: 146 SKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGSGICLYVDHLLA 205
           SKS++HRRWLWCSFFIGILLSVFW YFMMSLP+FRWDVIW P GPLSG+GICLYVDHLLA
Sbjct: 121 SKSSHHRRWLWCSFFIGILLSVFWFYFMMSLPKFRWDVIWLPLGPLSGAGICLYVDHLLA 180

Query: 206 ESTEEIRKLRGYMYSYKAN 225
           ES+EEIRKLRGYMYSYKAN
Sbjct: 181 ESSEEIRKLRGYMYSYKAN 199

[Close]
BLAST of Clc03G17310 vs. TAIR 10
Match: AT4G26240.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 260.0 bits (663), Expect = 1.8e-69
Identity = 125/200 (62.50%), Postives = 152/200 (76.00%), Query Frame = 0 

Query: 28  IKKLARILMKSR----DDAVSLPTRDDPSFDNSRPIDSQVQEEMVRSFERANDQQSLLWR 87
           +KKLAR   ++R    DD   LPT +D    +SRPID+Q QEE VR  E A+ QQSL WR
Sbjct: 1   MKKLARKWRRTRRDEDDDKFVLPTSEDV---DSRPIDTQEQEEYVRYLEEAHAQQSLQWR 60

Query: 88  TVFAVFLFCFAAFLLYSIVQQVSSPWELRYHAYFMEDVDSWMVIAADWIAILACTFSIIG 147
           +VF V L CF AFL YSI QQ  SPWELRYHAYFMED+ SWMVI+A+WIAI+AC+ SI+G
Sbjct: 61  SVFVVLLICFGAFLFYSIFQQFMSPWELRYHAYFMEDLKSWMVISAEWIAIMACSLSIVG 120

Query: 148 IASKSNYHRRWLWCSFFIGILLSVFWLYFMMSLPRFRWDVIWRPFGPLSGSGICLYVDHL 207
           +  K N HRRW W S  +G  L++FWLY+++ LP+FRWD IW PFGPL G+GICLYVDHL
Sbjct: 121 LRDKKNDHRRWFWYSCVVGSALTIFWLYYLLRLPKFRWDAIWLPFGPLCGAGICLYVDHL 180

Query: 208 LAESTEEIRKLRGYMYSYKA 224
           L ES+EE++KLR YMY+YKA
Sbjct: 181 LEESSEEVKKLRNYMYAYKA 197

The following BLAST results are available for this feature:
BLAST of Clc03G17310 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038880203.11.2e-10493.97uncharacterized protein LOC120071865 isoform X2 [Benincasa hispida][more]
KAG6588018.19.6e-10290.45hypothetical protein SDJN03_16583, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_008450815.11.3e-10190.45PREDICTED: uncharacterized protein LOC103492288 isoform X2 [Cucumis melo] >TYK10... [more]
XP_022927992.13.6e-10189.95uncharacterized protein LOC111434892 [Cucurbita moschata][more]
XP_023002535.16.2e-10189.95uncharacterized protein LOC111496345 [Cucurbita maxima][more]
BLAST of Clc03G17310 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Clc03G17310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CE296.1e-10290.45Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3BQS56.1e-10290.45uncharacterized protein LOC103492288 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1EIP31.8e-10189.95uncharacterized protein LOC111434892 OS=Cucurbita moschata OX=3662 GN=LOC1114348... [more]
A0A6J1KP793.0e-10189.95uncharacterized protein LOC111496345 OS=Cucurbita maxima OX=3661 GN=LOC111496345... [more]
A0A0A0LYS64.3e-10089.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G580190 PE=4 SV=1[more]
BLAST of Clc03G17310 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G26240.11.8e-6962.50unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36784HISTONE-LYSINE N-METHYLTRANSFERASEcoord: 29..223

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc03G17310.2Clc03G17310.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane