Clc03G15950 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCGAAGCTTTTGGATAGGTAATTGTATTTTTCCCTTCTTTTTCTTTTGTGGGTTTTTGTTTAAATTTAGGGGAAAAGGAAGAATGGGGGTACTCAGAGTCTGAATCCGGTAATGGGTTGAGGGAGTTTCGTTTACTTCTTACTTTTCCTTTGTTTCTTTTCAACTTGTGGAAAAACTAAATGAAAGAGTAGTTGAATTTGTTGCATCATCTTCTTGTAAATCGTTTGGTTAATGATTGTTAATCCATTGAATGCAGGGTTATTAGAGAGAAATTGTGTTGATGATCCACTGATTTTTGGGCCTTGGATCTTGAGGTTAGTTTGTAGTGCTGTATTTTGTGTGGGTTTTTTTTAGTGATTTTGGAGTGTTTCTTTGTACAAAATAGCAAATGGTGAATGTGATTTTTGTTGCAGAGATATGGAAAAGGAAGAAATAGGTCAGAAAAGCAATAAATCTGGTGAAACAGATTTTCTGTTGCAGTGGGGGAACAGGAAGAGGATGAGATATATGAAGGTTAAGGAACCACAAAGAATTACTAGTAAACCTGATTGTTTAGGGAAGAAGAAAGTTTCTTCTAAAGGGGATCGCCGTGTTGTTACAGCTGAGAAAGCTTCATCTACTCAGCAAACCCATCGCCTTAACAAGTAAGAAACCTGATTCCTGAATCAATGACAAACAAAACATACTCCATTATTCCCTTTGTTTCTGTGTTGTTAACTTTGGTGGGGGATGATTGTAAGGGGGAAGTTCAAGTTGATTCTACTCTGCTGCTCTTTAATCTAACAAGCTTTAGGTTTTGGATTGCTTAAAAATTCAAAGATCATATTTTAGGTCTTGAACAGCATAAAACAAGTACATTTTCCATCCTTTTTAGAGAACTTGATGAAGTATCTTTCTATTTGAACGCTACAGTTCTGGTTTGAACTGTTGATGATTAGAAGAAGAGTTTGTTATTGGTTGTATGTCGTTAGATAGATCCTTGTCTGTATCTTAAGCATTCTTTATTTTAACTCCTTCCACTTACAGCCTGGGGATTTACAGAATCATGTAGGCTATTATTGGTGTTAATTTTGTCATGATATTCTGTTTGGTCACAGGAGCATTGTTTCACCAACTAACAATCAAAGAACGACCCTAACATCACCCGAAAAGGAAGATCGGTACTATACGACAAGGGGTTCGATGGGTGTTGATGAAAAAGCCTCAATGGATCACCCCACAGGAAACGATCGAAAAGGGTTTGTCTGGCCAAGGCTCTATATTTCTCTGTCGAGCAAGGAGAAGGAAGAAGATTTCATGGCAATGAAAGGGTGTAAACTTCCTCAAAGGCCTAAGAAAAGAGCCAAGTTGTTACAGAAAAGCTTAGTTGTAAGTGTTCTAGCTTTGACTCATGCTTGATAGAGCCAAGGAGGAAAAGAAAGCAATCCCGTGTCAGACCGAGGAATCCTTTCTGTTCATCCTTTCCATTCATTTGAAAAATTAGCTAACTCCTTTCACTTGTGTGTGGATGCAGCTAGTGATGCCAGGTTCATGGCTATCAGATTTGTGCCAAGAGAGGTATGAGGTGAGGGAAAAGAAGACTTCAAAAAAGGTAAAAATAACAGAAACTCCTCCATGTATAAACTATTAGTGTAAAACATTCACTGAAATGTTATATAAAAGATTTTGTGAATCTAGAAGCTGACAAAGGATTATCAATCCATCCCATACCCTTTTTTGTGTTTCTCTTTCTAATAATAACTTGAGAATGGTATTGGAATATTATGCAGAGACCCAGAGGATTGAAGGCCATGAGAAGTATGGATAGTGACTCAGAATGA ATGGAGTCGAAGCTTTTGGATAGAGATATGGAAAAGGAAGAAATAGGTCAGAAAAGCAATAAATCTGGTGAAACAGATTTTCTGTTGCAGTGGGGGAACAGGAAGAGGATGAGATATATGAAGGTTAAGGAACCACAAAGAATTACTAGTAAACCTGATTGTTTAGGGAAGAAGAAAGTTTCTTCTAAAGGGGATCGCCGTGTTGTTACAGCTGAGAAAGCTTCATCTACTCAGCAAACCCATCGCCTTAACAAGAGCATTGTTTCACCAACTAACAATCAAAGAACGACCCTAACATCACCCGAAAAGGAAGATCGGTACTATACGACAAGGGGTTCGATGGGTGTTGATGAAAAAGCCTCAATGGATCACCCCACAGGAAACGATCGAAAAGGGTTTGTCTGGCCAAGGCTCTATATTTCTCTGTCGAGCAAGGAGAAGGAAGAAGATTTCATGGCAATGAAAGGGTGTAAACTTCCTCAAAGGCCTAAGAAAAGAGCCAAGTTGTTACAGAAAAGCTTAGTTCTAGTGATGCCAGGTTCATGGCTATCAGATTTGTGCCAAGAGAGGTATGAGGTGAGGGAAAAGAAGACTTCAAAAAAGAGACCCAGAGGATTGAAGGCCATGAGAAGTATGGATAGTGACTCAGAATGA ATGGAGTCGAAGCTTTTGGATAGAGATATGGAAAAGGAAGAAATAGGTCAGAAAAGCAATAAATCTGGTGAAACAGATTTTCTGTTGCAGTGGGGGAACAGGAAGAGGATGAGATATATGAAGGTTAAGGAACCACAAAGAATTACTAGTAAACCTGATTGTTTAGGGAAGAAGAAAGTTTCTTCTAAAGGGGATCGCCGTGTTGTTACAGCTGAGAAAGCTTCATCTACTCAGCAAACCCATCGCCTTAACAAGAGCATTGTTTCACCAACTAACAATCAAAGAACGACCCTAACATCACCCGAAAAGGAAGATCGGTACTATACGACAAGGGGTTCGATGGGTGTTGATGAAAAAGCCTCAATGGATCACCCCACAGGAAACGATCGAAAAGGGTTTGTCTGGCCAAGGCTCTATATTTCTCTGTCGAGCAAGGAGAAGGAAGAAGATTTCATGGCAATGAAAGGGTGTAAACTTCCTCAAAGGCCTAAGAAAAGAGCCAAGTTGTTACAGAAAAGCTTAGTTCTAGTGATGCCAGGTTCATGGCTATCAGATTTGTGCCAAGAGAGGTATGAGGTGAGGGAAAAGAAGACTTCAAAAAAGAGACCCAGAGGATTGAAGGCCATGAGAAGTATGGATAGTGACTCAGAATGA MESKLLDRDMEKEEIGQKSNKSGETDFLLQWGNRKRMRYMKVKEPQRITSKPDCLGKKKVSSKGDRRVVTAEKASSTQQTHRLNKSIVSPTNNQRTTLTSPEKEDRYYTTRGSMGVDEKASMDHPTGNDRKGFVWPRLYISLSSKEKEEDFMAMKGCKLPQRPKKRAKLLQKSLVLVMPGSWLSDLCQERYEVREKKTSKKRPRGLKAMRSMDSDSE Homology
BLAST of Clc03G15950 vs. NCBI nr
Match: XP_008451016.1 (PREDICTED: uncharacterized protein LOC103492424 isoform X1 [Cucumis melo]) HSP 1 Score: 406.0 bits (1042), Expect = 2.1e-109 Identity = 206/217 (94.93%), Postives = 212/217 (97.70%), Query Frame = 0
BLAST of Clc03G15950 vs. NCBI nr
Match: XP_011660058.1 (uncharacterized protein LOC101218228 isoform X3 [Cucumis sativus]) HSP 1 Score: 404.4 bits (1038), Expect = 6.0e-109 Identity = 205/217 (94.47%), Postives = 211/217 (97.24%), Query Frame = 0
BLAST of Clc03G15950 vs. NCBI nr
Match: XP_038879793.1 (uncharacterized protein LOC120071537 [Benincasa hispida]) HSP 1 Score: 400.6 bits (1028), Expect = 8.7e-108 Identity = 203/208 (97.60%), Postives = 207/208 (99.52%), Query Frame = 0
BLAST of Clc03G15950 vs. NCBI nr
Match: XP_008451017.1 (PREDICTED: uncharacterized protein LOC103492424 isoform X2 [Cucumis melo]) HSP 1 Score: 398.3 bits (1022), Expect = 4.3e-107 Identity = 202/208 (97.12%), Postives = 206/208 (99.04%), Query Frame = 0
BLAST of Clc03G15950 vs. NCBI nr
Match: XP_004144072.1 (uncharacterized protein LOC101218228 isoform X4 [Cucumis sativus] >KGN66359.1 hypothetical protein Csa_007265 [Cucumis sativus]) HSP 1 Score: 396.4 bits (1017), Expect = 1.6e-106 Identity = 201/208 (96.63%), Postives = 205/208 (98.56%), Query Frame = 0
BLAST of Clc03G15950 vs. ExPASy TrEMBL
Match: A0A1S3BPZ2 (uncharacterized protein LOC103492424 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492424 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 1.0e-109 Identity = 206/217 (94.93%), Postives = 212/217 (97.70%), Query Frame = 0
BLAST of Clc03G15950 vs. ExPASy TrEMBL
Match: A0A1S3BQL5 (uncharacterized protein LOC103492424 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492424 PE=4 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.1e-107 Identity = 202/208 (97.12%), Postives = 206/208 (99.04%), Query Frame = 0
BLAST of Clc03G15950 vs. ExPASy TrEMBL
Match: A0A0A0LZ81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G599530 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 7.9e-107 Identity = 201/208 (96.63%), Postives = 205/208 (98.56%), Query Frame = 0
BLAST of Clc03G15950 vs. ExPASy TrEMBL
Match: A0A6J1JCG4 (uncharacterized protein LOC111485516 OS=Cucurbita maxima OX=3661 GN=LOC111485516 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 2.5e-100 Identity = 194/209 (92.82%), Postives = 200/209 (95.69%), Query Frame = 0
BLAST of Clc03G15950 vs. ExPASy TrEMBL
Match: A0A6J1H9M1 (uncharacterized protein LOC111461360 OS=Cucurbita moschata OX=3662 GN=LOC111461360 PE=4 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 5.5e-100 Identity = 192/209 (91.87%), Postives = 200/209 (95.69%), Query Frame = 0
BLAST of Clc03G15950 vs. TAIR 10
Match: AT1G55340.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 234.6 bits (597), Expect = 7.7e-62 Identity = 126/208 (60.58%), Postives = 159/208 (76.44%), Query Frame = 0
BLAST of Clc03G15950 vs. TAIR 10
Match: AT1G55340.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 228.8 bits (582), Expect = 4.2e-60 Identity = 124/208 (59.62%), Postives = 155/208 (74.52%), Query Frame = 0
BLAST of Clc03G15950 vs. TAIR 10
Match: AT3G03880.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 147.5 bits (371), Expect = 1.2e-35 Identity = 91/204 (44.61%), Postives = 131/204 (64.22%), Query Frame = 0
BLAST of Clc03G15950 vs. TAIR 10
Match: AT4G20300.2 (Protein of unknown function (DUF1639) ) HSP 1 Score: 109.8 bits (273), Expect = 2.8e-24 Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Clc03G15950 vs. TAIR 10
Match: AT4G20300.1 (Protein of unknown function (DUF1639) ) HSP 1 Score: 96.3 bits (238), Expect = 3.3e-20 Identity = 45/67 (67.16%), Postives = 52/67 (77.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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