Clc03G14040 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G14040
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	integrator complex subunit 3 homolog
Location	ClcChr03: 24927749 .. 24928322 (+)
RNA-Seq Expression	Clc03G14040
Synteny	Clc03G14040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCCAAACTCATTCACTTGGCTGCATATGAAGCTGAAAATCATTTTGAGCTCTCTTTGAGACAAGCTTTCAAGCTTCTTGAACCAAAATTAAGACCTCCATTTTGTTTGAAAATTCCAGATCCACAAGAATACAAGGAGCTGAATTGGGCTATTCTCTATGGGATTTTATGTGAACCACATTTTGCTAAAATTCATATGAAGCATTTGCATGCAATTGTCACGGATGGTTATGGTCTGATTTGTTATCTGCTTCGAAAGGTTGTTAATGAACTGTATCTTAAACTCATTGATTCTGCAAAATGTCAAATATTTATGGCGACTAAGGAAATGATAAATGTATGTGCTGTCGGGGTCGATTCTGTTTTGATATCTCTGTTCAGGCAAATTGTTGGAGGGGATTTTGGTGAAGGGAATTTATGGTTGTGTTTTGAATTGGTGAGTCTACTTTTCAACAGTTGGAATTATTTGTTGGAAGAATTACCAGAGGTTATAATAAGTGCACTATATACCTTTTTACGATTATTGGCAGACCACTGCAGATTCTCTGATGCAAAATTGGAGCCTTTGA

mRNA sequence

ATGGTTTCCAAACTCATTCACTTGGCTGCATATGAAGCTGAAAATCATTTTGAGCTCTCTTTGAGACAAGCTTTCAAGCTTCTTGAACCAAAATTAAGACCTCCATTTTGTTTGAAAATTCCAGATCCACAAGAATACAAGGAGCTGAATTGGGCTATTCTCTATGGGATTTTATGTGAACCACATTTTGCTAAAATTCATATGAAGCATTTGCATGCAATTGTCACGGATGGTTATGGTCTGATTTGTTATCTGCTTCGAAAGGTTGTTAATGAACTGTATCTTAAACTCATTGATTCTGCAAAATGTCAAATATTTATGGCGACTAAGGAAATGATAAATGTATGTGCTGTCGGGGTCGATTCTGTTTTGATATCTCTGTTCAGGCAAATTGTTGGAGGGGATTTTGGTGAAGGGAATTTATGGTTGTGTTTTGAATTGACCACTGCAGATTCTCTGATGCAAAATTGGAGCCTTTGA

Coding sequence (CDS)

ATGGTTTCCAAACTCATTCACTTGGCTGCATATGAAGCTGAAAATCATTTTGAGCTCTCTTTGAGACAAGCTTTCAAGCTTCTTGAACCAAAATTAAGACCTCCATTTTGTTTGAAAATTCCAGATCCACAAGAATACAAGGAGCTGAATTGGGCTATTCTCTATGGGATTTTATGTGAACCACATTTTGCTAAAATTCATATGAAGCATTTGCATGCAATTGTCACGGATGGTTATGGTCTGATTTGTTATCTGCTTCGAAAGGTTGTTAATGAACTGTATCTTAAACTCATTGATTCTGCAAAATGTCAAATATTTATGGCGACTAAGGAAATGATAAATGTATGTGCTGTCGGGGTCGATTCTGTTTTGATATCTCTGTTCAGGCAAATTGTTGGAGGGGATTTTGGTGAAGGGAATTTATGGTTGTGTTTTGAATTGACCACTGCAGATTCTCTGATGCAAAATTGGAGCCTTTGA

Protein sequence

MVSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPDPQEYKELNWAILYGILCEPHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMINVCAVGVDSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWSL

Homology

[Close]

BLAST of Clc03G14040 vs. NCBI nr
Match: XP_038879700.1 (integrator complex subunit 3 isoform X4 [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 3.2e-75
Identity = 140/158 (88.61%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MVSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60
           MVSKLIH+AAYEAENHFELSLRQAF+LLEPKLRPPFCLKIP+PQEYKELNWAILYGILCE
Sbjct: 1   MVSKLIHVAAYEAENHFELSLRQAFELLEPKLRPPFCLKIPNPQEYKELNWAILYGILCE 60

Query: 61  PHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMINVCAVGV 120
           PH AK H+KHLHAIVTDGYGLICYLLRKVVNELYLKL+DSAKCQIFM TKEMINVCAVGV
Sbjct: 61  PHLAKPHIKHLHAIVTDGYGLICYLLRKVVNELYLKLVDSAKCQIFMVTKEMINVCAVGV 120

Query: 121 DSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWS 159
           D+VLISL RQIVGGDFGEGNLWLCFEL +   L+ +WS
Sbjct: 121 DAVLISLLRQIVGGDFGEGNLWLCFELVSL--LLNSWS 156

[Close]

BLAST of Clc03G14040 vs. NCBI nr
Match: XP_038879691.1 (integrator complex subunit 3 homolog isoform X1 [Benincasa hispida] >XP_038879692.1 integrator complex subunit 3 homolog isoform X1 [Benincasa hispida] >XP_038879693.1 integrator complex subunit 3 homolog isoform X1 [Benincasa hispida] >XP_038879694.1 integrator complex subunit 3 homolog isoform X1 [Benincasa hispida] >XP_038879695.1 integrator complex subunit 3 homolog isoform X1 [Benincasa hispida] >XP_038879696.1 integrator complex subunit 3 homolog isoform X1 [Benincasa hispida] >XP_038879697.1 integrator complex subunit 3 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 3.2e-75
Identity = 140/158 (88.61%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MVSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60
           MVSKLIH+AAYEAENHFELSLRQAF+LLEPKLRPPFCLKIP+PQEYKELNWAILYGILCE
Sbjct: 1   MVSKLIHVAAYEAENHFELSLRQAFELLEPKLRPPFCLKIPNPQEYKELNWAILYGILCE 60

Query: 61  PHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMINVCAVGV 120
           PH AK H+KHLHAIVTDGYGLICYLLRKVVNELYLKL+DSAKCQIFM TKEMINVCAVGV
Sbjct: 61  PHLAKPHIKHLHAIVTDGYGLICYLLRKVVNELYLKLVDSAKCQIFMVTKEMINVCAVGV 120

Query: 121 DSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWS 159
           D+VLISL RQIVGGDFGEGNLWLCFEL +   L+ +WS
Sbjct: 121 DAVLISLLRQIVGGDFGEGNLWLCFELVSL--LLNSWS 156

[Close]

BLAST of Clc03G14040 vs. NCBI nr
Match: XP_038879698.1 (uncharacterized protein LOC120071465 isoform X2 [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 3.2e-75
Identity = 140/158 (88.61%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MVSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60
           MVSKLIH+AAYEAENHFELSLRQAF+LLEPKLRPPFCLKIP+PQEYKELNWAILYGILCE
Sbjct: 1   MVSKLIHVAAYEAENHFELSLRQAFELLEPKLRPPFCLKIPNPQEYKELNWAILYGILCE 60

Query: 61  PHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMINVCAVGV 120
           PH AK H+KHLHAIVTDGYGLICYLLRKVVNELYLKL+DSAKCQIFM TKEMINVCAVGV
Sbjct: 61  PHLAKPHIKHLHAIVTDGYGLICYLLRKVVNELYLKLVDSAKCQIFMVTKEMINVCAVGV 120

Query: 121 DSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWS 159
           D+VLISL RQIVGGDFGEGNLWLCFEL +   L+ +WS
Sbjct: 121 DAVLISLLRQIVGGDFGEGNLWLCFELVSL--LLNSWS 156

[Close]

BLAST of Clc03G14040 vs. NCBI nr
Match: XP_038879699.1 (integrator complex subunit 3 homolog isoform X3 [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 3.2e-75
Identity = 140/158 (88.61%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MVSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60
           MVSKLIH+AAYEAENHFELSLRQAF+LLEPKLRPPFCLKIP+PQEYKELNWAILYGILCE
Sbjct: 1   MVSKLIHVAAYEAENHFELSLRQAFELLEPKLRPPFCLKIPNPQEYKELNWAILYGILCE 60

Query: 61  PHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMINVCAVGV 120
           PH AK H+KHLHAIVTDGYGLICYLLRKVVNELYLKL+DSAKCQIFM TKEMINVCAVGV
Sbjct: 61  PHLAKPHIKHLHAIVTDGYGLICYLLRKVVNELYLKLVDSAKCQIFMVTKEMINVCAVGV 120

Query: 121 DSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWS 159
           D+VLISL RQIVGGDFGEGNLWLCFEL +   L+ +WS
Sbjct: 121 DAVLISLLRQIVGGDFGEGNLWLCFELVSL--LLNSWS 156

[Close]

BLAST of Clc03G14040 vs. NCBI nr
Match: XP_038879701.1 (integrator complex subunit 3 isoform X5 [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 3.2e-75
Identity = 140/158 (88.61%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MVSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60
           MVSKLIH+AAYEAENHFELSLRQAF+LLEPKLRPPFCLKIP+PQEYKELNWAILYGILCE
Sbjct: 1   MVSKLIHVAAYEAENHFELSLRQAFELLEPKLRPPFCLKIPNPQEYKELNWAILYGILCE 60

Query: 61  PHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMINVCAVGV 120
           PH AK H+KHLHAIVTDGYGLICYLLRKVVNELYLKL+DSAKCQIFM TKEMINVCAVGV
Sbjct: 61  PHLAKPHIKHLHAIVTDGYGLICYLLRKVVNELYLKLVDSAKCQIFMVTKEMINVCAVGV 120

Query: 121 DSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWS 159
           D+VLISL RQIVGGDFGEGNLWLCFEL +   L+ +WS
Sbjct: 121 DAVLISLLRQIVGGDFGEGNLWLCFELVSL--LLNSWS 156

[Close]

BLAST of Clc03G14040 vs. ExPASy Swiss-Prot
Match: Q1LXC9 (Integrator complex subunit 3 OS=Danio rerio OX=7955 GN=ints3 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 31/101 (30.69%), Postives = 56/101 (55.45%), Query Frame = 0


Query: 43  PQEYKELNWAILYGILCEPHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAK 102
           PQ+++E+   +   +L EP  A+   + L  +  DG  ++   + +++ E +LKL D  +
Sbjct: 61  PQQHEEVCLGLFTLLLTEPPQAQRCYRDLTLVNRDGMNVVLMKINQILMEKFLKLQDVCR 120

Query: 103 CQIFMATKEMINVCAVGVDSVLISLFRQIVGGDFGEGNLWL 144
            Q+    +E++    +G D VL++L +QI GGD    NLWL
Sbjct: 121 TQLVWLVRELVKSGVIGADGVLMTLMKQIAGGDISSKNLWL 161

[Close]

BLAST of Clc03G14040 vs. ExPASy Swiss-Prot
Match: Q7TPD0 (Integrator complex subunit 3 OS=Mus musculus OX=10090 GN=Ints3 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 30/117 (25.64%), Postives = 59/117 (50.43%), Query Frame = 0


Query: 43  PQEYKELNWAILYGILCEPHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAK 102
           P +++E+   +   +L EP  A+   + L  +  DG  ++   + +++ E YLKL D+ +
Sbjct: 82  PPQHEEICLGLFTLVLTEPAQAQKCYRDLALVSRDGMNIVLNKINQLLMEKYLKLQDTCR 141

Query: 103 CQIFMATKEMINVCAVGVDSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWSL 160
            Q+    +E++    +G D V ++  +QI GGD    N+WL   +    +  + W L
Sbjct: 142 TQLVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTAKNIWLAESVLDILTEQREWVL 198

[Close]

BLAST of Clc03G14040 vs. ExPASy Swiss-Prot
Match: Q5RE70 (Integrator complex subunit 3 OS=Pongo abelii OX=9601 GN=INTS3 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.8e-08
Identity = 30/115 (26.09%), Postives = 58/115 (50.43%), Query Frame = 0


Query: 45  EYKELNWAILYGILCEPHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQ 104
           +++E+   +   IL EP  A+   + L  +  DG  ++   + +++ E YLKL D+ + Q
Sbjct: 86  QHEEICLGLFTLILTEPAQAQKCYRDLALVSRDGMNIVLNKINQILMEKYLKLQDTCRTQ 145

Query: 105 IFMATKEMINVCAVGVDSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWSL 160
           +    +E++    +G D V ++  +QI GGD    N+WL   +    +  + W L
Sbjct: 146 LVWLVRELVKSGVLGADGVCMTFMKQIAGGDVTAKNIWLAESVLDILTEQREWVL 200

[Close]

BLAST of Clc03G14040 vs. ExPASy Swiss-Prot
Match: Q68E01 (Integrator complex subunit 3 OS=Homo sapiens OX=9606 GN=INTS3 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.9e-06
Identity = 30/116 (25.86%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 45  EYKELNWAILYGILCEPHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQ 104
           +++E+   +   IL EP  A+   + L  +  DG  ++   + +++ E YLKL D+ + Q
Sbjct: 85  QHEEICLGLFTLILTEPAQAQKCYRDLALVSRDGMNIVLNKINQILMEKYLKLQDTCRTQ 144

Query: 105 IFMATKEMINVCAVGVDSVLISLFRQIV-GGDFGEGNLWLCFELTTADSLMQNWSL 160
           +    +E++    +G D V ++  +QI  GGD    N+WL   +    +  + W L
Sbjct: 145 LVWLVRELVKSGVLGADGVCMTFMKQIAGGGDVTAKNIWLAESVLDILTEQREWVL 200

[Close]

BLAST of Clc03G14040 vs. ExPASy Swiss-Prot
Match: B4KJ11 (Integrator complex subunit 3 homolog OS=Drosophila mojavensis OX=7230 GN=IntS3 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.3e-06
Identity = 37/150 (24.67%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 2   VSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPD--------PQEYKELNWAI 61
           VSKL    A + ++  E    +++  L+ ++      ++ D         ++++E++   
Sbjct: 12  VSKLFVCTAVDCKDEIEEKFERSYASLQQQIAGLSDKEMHDMLTQFVCKEKQHEEISIGF 71

Query: 62  LYGILCEPHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMI 121
           LY IL +P  A    + +  +  DG  +I   L  +V E Y KL ++A+ Q+    +E +
Sbjct: 72  LYIILTDPAMAPKTYRDITLVSRDGMNVIVANLTLLVAEKYTKLTETARRQLIWVLREFV 131

Query: 122 NVCAVGVDSVLISLFRQIVGGDFGEGNLWL 144
               + V++V+ +  RQ  GGD    NL+L
Sbjct: 132 KHQVLSVENVIWNCLRQAGGGDVSHKNLFL 161

[Close]

BLAST of Clc03G14040 vs. ExPASy TrEMBL
Match: A0A0A0LXR4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G627430 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.5e-75
Identity = 139/158 (87.97%), Postives = 147/158 (93.04%), Query Frame = 0


Query: 1   MVSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60
           MVSKLIH+AAYEAENHFE+SLRQAF+LLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE
Sbjct: 1   MVSKLIHVAAYEAENHFEVSLRQAFELLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60

Query: 61  PHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMINVCAVGV 120
           PH  K H+KHLHAIVTDGYGLICYLLRKVVNELYLKLID AKCQIFM TKEMI VCAVGV
Sbjct: 61  PHLGKTHIKHLHAIVTDGYGLICYLLRKVVNELYLKLIDGAKCQIFMVTKEMIKVCAVGV 120

Query: 121 DSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWS 159
           D+VLISL RQIVGGDFGEGNLWLCFELT+   L+ +WS
Sbjct: 121 DAVLISLLRQIVGGDFGEGNLWLCFELTSL--LLNSWS 156

[Close]

BLAST of Clc03G14040 vs. ExPASy TrEMBL
Match: A0A5D3DW40 (Integrator complex subunit 3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00540 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.2e-74
Identity = 138/158 (87.34%), Postives = 146/158 (92.41%), Query Frame = 0


Query: 1   MVSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60
           MVSKLIH+AAYEAENHFE+SLRQAF+LLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE
Sbjct: 1   MVSKLIHVAAYEAENHFEVSLRQAFELLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60

Query: 61  PHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMINVCAVGV 120
           PH  K H+KHLHAIVTDGYGLICYLLRKVVNELYLKLID AKCQIFM TKEMI VCAVGV
Sbjct: 61  PHLGKTHIKHLHAIVTDGYGLICYLLRKVVNELYLKLIDCAKCQIFMVTKEMIKVCAVGV 120

Query: 121 DSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWS 159
           D+VLISL RQIVGGDFGEGNLWLCFEL +   L+ +WS
Sbjct: 121 DAVLISLLRQIVGGDFGEGNLWLCFELVSL--LLNSWS 156

[Close]

BLAST of Clc03G14040 vs. ExPASy TrEMBL
Match: A0A5A7UN45 (Integrator complex subunit 3-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G001810 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.2e-74
Identity = 138/158 (87.34%), Postives = 146/158 (92.41%), Query Frame = 0


Query: 1   MVSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60
           MVSKLIH+AAYEAENHFE+SLRQAF+LLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE
Sbjct: 1   MVSKLIHVAAYEAENHFEVSLRQAFELLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60

Query: 61  PHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMINVCAVGV 120
           PH  K H+KHLHAIVTDGYGLICYLLRKVVNELYLKLID AKCQIFM TKEMI VCAVGV
Sbjct: 61  PHLGKTHIKHLHAIVTDGYGLICYLLRKVVNELYLKLIDCAKCQIFMVTKEMIKVCAVGV 120

Query: 121 DSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWS 159
           D+VLISL RQIVGGDFGEGNLWLCFEL +   L+ +WS
Sbjct: 121 DAVLISLLRQIVGGDFGEGNLWLCFELVSL--LLNSWS 156

[Close]

BLAST of Clc03G14040 vs. ExPASy TrEMBL
Match: A0A1S4DYU4 (integrator complex subunit 3 homolog OS=Cucumis melo OX=3656 GN=LOC103491988 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 2.2e-74
Identity = 138/158 (87.34%), Postives = 146/158 (92.41%), Query Frame = 0


Query: 1   MVSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60
           MVSKLIH+AAYEAENHFE+SLRQAF+LLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE
Sbjct: 1   MVSKLIHVAAYEAENHFEVSLRQAFELLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60

Query: 61  PHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMINVCAVGV 120
           PH  K H+KHLHAIVTDGYGLICYLLRKVVNELYLKLID AKCQIFM TKEMI VCAVGV
Sbjct: 61  PHLGKTHIKHLHAIVTDGYGLICYLLRKVVNELYLKLIDCAKCQIFMVTKEMIKVCAVGV 120

Query: 121 DSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWS 159
           D+VLISL RQIVGGDFGEGNLWLCFEL +   L+ +WS
Sbjct: 121 DAVLISLLRQIVGGDFGEGNLWLCFELVSL--LLNSWS 156

[Close]

BLAST of Clc03G14040 vs. ExPASy TrEMBL
Match: A0A6J1I8I1 (uncharacterized protein LOC111472338 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111472338 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.6e-64
Identity = 126/158 (79.75%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 1   MVSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60
           M+SKLIH+A+YEAENHFELSLRQAF LLEPKLRPPFCLKIP+PQEY ELN AILYGILCE
Sbjct: 1   MISKLIHVASYEAENHFELSLRQAFNLLEPKLRPPFCLKIPNPQEYLELNQAILYGILCE 60

Query: 61  PHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMINVCAVGV 120
           P  AK H+KHLHAIV DGYGLI YLLRKVVNELYLKLI SAK QI   T+EMI+VCAVGV
Sbjct: 61  PLLAKTHIKHLHAIVIDGYGLIVYLLRKVVNELYLKLIGSAKSQILFVTEEMIDVCAVGV 120

Query: 121 DSVLISLFRQIVGGDFGEGNLWLCFELTTADSLMQNWS 159
           D VLISL RQIVGGDFGEGNLWLCFE+   +  +  WS
Sbjct: 121 DGVLISLLRQIVGGDFGEGNLWLCFEM--VNLFLNKWS 156

[Close]

BLAST of Clc03G14040 vs. TAIR 10
Match: AT4G14590.1 (embryo defective 2739 )

HSP 1 Score: 164.9 bits (416), Expect = 5.5e-41
Identity = 78/131 (59.54%), Postives = 104/131 (79.39%), Query Frame = 0


Query: 1   MVSKLIHLAAYEAENHFELSLRQAFKLLEPKLRPPFCLKIPDPQEYKELNWAILYGILCE 60
           + SKLI ++ +E EN  ELSLRQAF+ L+PKLRPPF L++PDPQEY ELN AI+YG+LCE
Sbjct: 6   VTSKLIRVSLHEVENQLELSLRQAFENLQPKLRPPFSLELPDPQEYLELNKAIVYGVLCE 65

Query: 61  PHFAKIHMKHLHAIVTDGYGLICYLLRKVVNELYLKLIDSAKCQIFMATKEMINVCAVGV 120
           P+ +K H+KHLHA+VTDGY     LL  +V ELY+KL+DSAK Q+   TKEMI+V +VG+
Sbjct: 66  PNSSKTHIKHLHALVTDGYAFFTSLLIGIVVELYVKLVDSAKIQLIWVTKEMIDVSSVGI 125

Query: 121 DSVLISLFRQI 132
           + +++SL R+I
Sbjct: 126 EDLVVSLLRRI 136

The following BLAST results are available for this feature:

BLAST of Clc03G14040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879700.1	3.2e-75	88.61	integrator complex subunit 3 isoform X4 [Benincasa hispida]	[more]
XP_038879691.1	3.2e-75	88.61	integrator complex subunit 3 homolog isoform X1 [Benincasa hispida] >XP_03887969...	[more]
XP_038879698.1	3.2e-75	88.61	uncharacterized protein LOC120071465 isoform X2 [Benincasa hispida]	[more]
XP_038879699.1	3.2e-75	88.61	integrator complex subunit 3 homolog isoform X3 [Benincasa hispida]	[more]
XP_038879701.1	3.2e-75	88.61	integrator complex subunit 3 isoform X5 [Benincasa hispida]	[more]

BLAST of Clc03G14040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1LXC9	1.8e-09	30.69	Integrator complex subunit 3 OS=Danio rerio OX=7955 GN=ints3 PE=2 SV=1	[more]
Q7TPD0	3.5e-08	25.64	Integrator complex subunit 3 OS=Mus musculus OX=10090 GN=Ints3 PE=1 SV=2	[more]
Q5RE70	7.8e-08	26.09	Integrator complex subunit 3 OS=Pongo abelii OX=9601 GN=INTS3 PE=2 SV=1	[more]
Q68E01	1.9e-06	25.86	Integrator complex subunit 3 OS=Homo sapiens OX=9606 GN=INTS3 PE=1 SV=1	[more]
B4KJ11	4.3e-06	24.67	Integrator complex subunit 3 homolog OS=Drosophila mojavensis OX=7230 GN=IntS3 P...	[more]

BLAST of Clc03G14040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXR4	4.5e-75	87.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G627430 PE=3 SV=1	[more]
A0A5D3DW40	2.2e-74	87.34	Integrator complex subunit 3-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5A7UN45	2.2e-74	87.34	Integrator complex subunit 3-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S4DYU4	2.2e-74	87.34	integrator complex subunit 3 homolog OS=Cucumis melo OX=3656 GN=LOC103491988 PE=...	[more]
A0A6J1I8I1	1.6e-64	79.75	uncharacterized protein LOC111472338 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Clc03G14040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14590.1	5.5e-41	59.54	embryo defective 2739	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019333	Integrator complex subunit 3	PANTHER	PTHR13587	INTEGRATOR COMPLEX SUBUNIT 3	coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G14040.1	Clc03G14040.1	mRNA