Clc03G13940 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G13940
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	AT-hook motif nuclear-localized protein
Location	ClcChr03: 24649809 .. 24651658 (-)
RNA-Seq Expression	Clc03G13940
Synteny	Clc03G13940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACTACGGCGGAGCTATTTCTCTATCCCACCAACCCCCAACCTCCGACTCCTCCTCCGACAACCACAGCCCTCCAAGCAGACCCCTCTCCGCCGCAGCAAAACCCAAAACCCCCCTCTCCGGCGGCGGCGCCTCCTCGTCAGCCGACACCTCCGGAAGAAAGCCACGTGGAAGGCCACCTGGATCAAAGAACAAACCAAAGCCTCCAATAGTGATAACTAAAGAGAATGAATCAAGCATGAAGCCCGTAGTGATAGAGATCTCAGCCGGAAACGACGTCGTGGATACCCTCCTTAACTTCGCCCGAAAACGACATGTCGGCCTCACTGTCCTCAGCGGCTCTGGCTCCGTTTCGAATGTTACACTACGACACCCAATGTCGCATTCTACTTCCTTATCCCTTCATGGACCTTTCAGCCTTGTTTCTCTCTCTGGCTCTTTCCTTGCTAATACGACGCCGTTTTCCTCTAAACCACTTTCTTCCTCTTCTTCCTCTTTTGGGATTTGTCTTGCTGGTGCTCAAGGTCAGGTGAGCTTAAACCTGATTGGTTACCGTAAATTTATTTATCTCTTTTTTAACAAAAAAAAAAAAAAAAAAAAAAAAAGATTTATTGCACATGACTTGATAAATCATTTTAAGATTATTCATTGCATAATAAGATATTTGAATATATTATACAAATAATAAGATATTTCATTGCGATTTTGTTTTAGTCTTTTATTTTTTTAATTTTGATTTAAAGTTTATTCTTGCTTACTTTTCAAGCTTTGAAGGGAAAACAAATTTAAATTTCAAGTTGGATTTAAAAAAAATAACAAAAACAAAAGTTTAAAACTACTTTCTTTTTATTTATATTTTTTAAAAAATTGGCATTTTAAAGTTTACGCAGATATATATTTTTTAAATTGTGGTTTTTATAAGTTAATAGCTTAATAAACACGACCTTTTTAAGCAAGTAAATATTATTTGGGTTTAGTTTTTTTTAGAACATCAAGTCAAAGTTTTAGAATTTAACTAAAAATTCACGGAAAATAAAAATTATTCTAAAATTTTTGTGAAACTTTTATTTTTTATTTTTTATTTTATAATGTAAAATGTTAAACTTAGAAATACTATTTTCAATTTTTTTATATCTAAATTTTTAAGTATATTTTCAAATATAGAAAAATGAATAAAAATATTTATAAATATAATGAAATTTTATTGTATATTGTATCTTTGGAGATATAATGTGATATTTTACTATTAATTGTCCATATTTTTAATAGTTGTTTATTTAAAATAATTTCTCTACTTTTTAAAGTATATTTTAAAAAATCAGCCATGTTTAGAATTTTAAAGAAATATAGAAAATCTTCTCAAGAAACGTGAAAACATAATAAAAGAAGTTTAAGAAGGAAACATGTATAAATTACATAAAAACTTAAAATGGAATCGTTATCAAACAAATCATAATTTTCAAAAGTAAAAAATAAATGACAAAATATATGTAAGTATCAAGAGCATTTAAATTGTTATTAGTTACGGTCAATTTAATGTTTATGAATCATATTCTCGACAAGGTGTTTGGAGGCATAGTTGGGGGGAAAGTCACGGCAGCAAGTCTCGTGGTGGTGGTTGCAGCGACGTTTGTAAATCCAGTGTTCTATCGACTGCCAAGCGAGATGGCGGAGGATGACGATGGGGTTGATATGGCGAAACCCGCCATCAACGCTACCGATGAGTCTCCCGTTGCAGCAACTACAACAAGCTCGGCGACTCCGATGGCGGTGTGTGTATACAATGCTCCATCTCCCCCGGATCATGCAATGCCATGGGGGCCGAGTTCTCGATTATCTTACTGA

mRNA sequence

ATGGCGGACTACGGCGGAGCTATTTCTCTATCCCACCAACCCCCAACCTCCGACTCCTCCTCCGACAACCACAGCCCTCCAAGCAGACCCCTCTCCGCCGCAGCAAAACCCAAAACCCCCCTCTCCGGCGGCGGCGCCTCCTCGTCAGCCGACACCTCCGGAAGAAAGCCACGTGGAAGGCCACCTGGATCAAAGAACAAACCAAAGCCTCCAATAGTGATAACTAAAGAGAATGAATCAAGCATGAAGCCCGTAGTGATAGAGATCTCAGCCGGAAACGACGTCGTGGATACCCTCCTTAACTTCGCCCGAAAACGACATGTCGGCCTCACTGTCCTCAGCGGCTCTGGCTCCGTTTCGAATGTTACACTACGACACCCAATGTCGCATTCTACTTCCTTATCCCTTCATGGACCTTTCAGCCTTGTTTCTCTCTCTGGCTCTTTCCTTGCTAATACGACGCCGTTTTCCTCTAAACCACTTTCTTCCTCTTCTTCCTCTTTTGGGATTTGTCTTGCTGGTGCTCAAGGTCAGGTGAGCTTAAACCTGATTGGTTACCTTACGGTCAATTTAATGTTTATGAATCATATTCTCGACAAGGTGTTTGGAGGCATAGTTGGGGGGAAAGTCACGGCAGCAAGTCTCGTGGTGGTGGTTGCAGCGACGTTTGTAAATCCAGTGTTCTATCGACTGCCAAGCGAGATGGCGGAGGATGACGATGGGGTTGATATGGCGAAACCCGCCATCAACGCTACCGATGAGTCTCCCGTTGCAGCAACTACAACAAGCTCGGCGACTCCGATGGCGGTGTGTGTATACAATGCTCCATCTCCCCCGGATCATGCAATGCCATGGGGGCCGAGTTCTCGATTATCTTACTGA

Coding sequence (CDS)

ATGGCGGACTACGGCGGAGCTATTTCTCTATCCCACCAACCCCCAACCTCCGACTCCTCCTCCGACAACCACAGCCCTCCAAGCAGACCCCTCTCCGCCGCAGCAAAACCCAAAACCCCCCTCTCCGGCGGCGGCGCCTCCTCGTCAGCCGACACCTCCGGAAGAAAGCCACGTGGAAGGCCACCTGGATCAAAGAACAAACCAAAGCCTCCAATAGTGATAACTAAAGAGAATGAATCAAGCATGAAGCCCGTAGTGATAGAGATCTCAGCCGGAAACGACGTCGTGGATACCCTCCTTAACTTCGCCCGAAAACGACATGTCGGCCTCACTGTCCTCAGCGGCTCTGGCTCCGTTTCGAATGTTACACTACGACACCCAATGTCGCATTCTACTTCCTTATCCCTTCATGGACCTTTCAGCCTTGTTTCTCTCTCTGGCTCTTTCCTTGCTAATACGACGCCGTTTTCCTCTAAACCACTTTCTTCCTCTTCTTCCTCTTTTGGGATTTGTCTTGCTGGTGCTCAAGGTCAGGTGAGCTTAAACCTGATTGGTTACCTTACGGTCAATTTAATGTTTATGAATCATATTCTCGACAAGGTGTTTGGAGGCATAGTTGGGGGGAAAGTCACGGCAGCAAGTCTCGTGGTGGTGGTTGCAGCGACGTTTGTAAATCCAGTGTTCTATCGACTGCCAAGCGAGATGGCGGAGGATGACGATGGGGTTGATATGGCGAAACCCGCCATCAACGCTACCGATGAGTCTCCCGTTGCAGCAACTACAACAAGCTCGGCGACTCCGATGGCGGTGTGTGTATACAATGCTCCATCTCCCCCGGATCATGCAATGCCATGGGGGCCGAGTTCTCGATTATCTTACTGA

Protein sequence

MADYGGAISLSHQPPTSDSSSDNHSPPSRPLSAAAKPKTPLSGGGASSSADTSGRKPRGRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSVSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLSSSSSSFGICLAGAQGQVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLPSEMAEDDDGVDMAKPAINATDESPVAATTTSSATPMAVCVYNAPSPPDHAMPWGPSSRLSY

Homology

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BLAST of Clc03G13940 vs. NCBI nr
Match: XP_008450342.1 (PREDICTED: AT-hook motif nuclear-localized protein 28-like [Cucumis melo] >KAA0055995.1 AT-hook motif nuclear-localized protein 28-like [Cucumis melo var. makuwa] >TYK27685.1 AT-hook motif nuclear-localized protein 28-like [Cucumis melo var. makuwa])

HSP 1 Score: 420.6 bits (1080), Expect = 1.1e-113
Identity = 244/303 (80.53%), Postives = 254/303 (83.83%), Query Frame = 0


Query: 1   MADYGGAISLSHQPPTSDSSSDNHSPPSRPLSAAAKP-KTPLSGGGASSSADTSG-RKPR 60
           MADYGGAISLSHQPPTS SSSD+HSPP+RP     KP KTP+S  GA+SSADTS  +KPR
Sbjct: 1   MADYGGAISLSHQPPTSSSSSDDHSPPTRP---QTKPNKTPIS--GAASSADTSTMKKPR 60

Query: 61  GRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGS 120
           GRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLL+FARKRHVGLTVLSGSGS
Sbjct: 61  GRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLHFARKRHVGLTVLSGSGS 120

Query: 121 VSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLS-------SSSSSFGIC 180
           VSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKP S       S SSSFGIC
Sbjct: 121 VSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPHSLSPSPSPSPSSSFGIC 180

Query: 181 LAGAQGQVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRL 240
           LAGAQGQ                      VFGGIVGGKVTAASLVVVVAATF+NPVF+RL
Sbjct: 181 LAGAQGQ----------------------VFGGIVGGKVTAASLVVVVAATFINPVFHRL 240

Query: 241 PSE-MAEDDDGVDMAKPAINATDESPVAATTTSSATPMAVCVYNAPSPPDHAMPWGPSSR 294
           PSE  AEDD+G+DMAKP INATDESPV ATTTSSATPM VCVYNAPSPPDHAMPW PSSR
Sbjct: 241 PSETAAEDDEGIDMAKPTINATDESPVTATTTSSATPMTVCVYNAPSPPDHAMPWVPSSR 276

[Close]

BLAST of Clc03G13940 vs. NCBI nr
Match: XP_038880172.1 (AT-hook motif nuclear-localized protein 17-like [Benincasa hispida])

HSP 1 Score: 416.0 bits (1068), Expect = 2.7e-112
Identity = 235/293 (80.20%), Postives = 249/293 (84.98%), Query Frame = 0


Query: 1   MADYGGAISLSHQPPTSDSSSDNHSPPSRPLSAAAKPKTPLSGGGASSSADTSGRKPRGR 60
           MADYGGAISLSHQPPTS SSS +H+PP+   +   KPKTP+     SS+ ++S +KPRGR
Sbjct: 1   MADYGGAISLSHQPPTSSSSSSDHNPPT---TTRPKPKTPM-----SSTDNSSIKKPRGR 60

Query: 61  PPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSVS 120
           PPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSVS
Sbjct: 61  PPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSVS 120

Query: 121 NVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLSSSSSSFGICLAGAQGQVS 180
           NVTLRHPMSHST+LSLHGPFSLVSLSGSFLANTTPFSSKPL SSSSSFGICLAGAQGQ  
Sbjct: 121 NVTLRHPMSHSTNLSLHGPFSLVSLSGSFLANTTPFSSKPL-SSSSSFGICLAGAQGQ-- 180

Query: 181 LNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLPSEMAEDDD 240
                               VFGGIVGGKVTAASLVVVVAATF+NPVF+RLPSE AEDD+
Sbjct: 181 --------------------VFGGIVGGKVTAASLVVVVAATFINPVFHRLPSETAEDDE 240

Query: 241 GVDMAKPAINATDESPVAATTTSSATPMAVCVYNAPSPPDHAMPWGPSSRLSY 294
           G   AKPAIN TDESPVAATTTSSATPMAVC+YNAPSPPDHAMPWGPSSR SY
Sbjct: 241 G---AKPAINTTDESPVAATTTSSATPMAVCIYNAPSPPDHAMPWGPSSRSSY 259

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BLAST of Clc03G13940 vs. NCBI nr
Match: XP_004139130.1 (AT-hook motif nuclear-localized protein 17 [Cucumis sativus] >KGN66545.1 hypothetical protein Csa_006864 [Cucumis sativus])

HSP 1 Score: 416.0 bits (1068), Expect = 2.7e-112
Identity = 239/302 (79.14%), Postives = 249/302 (82.45%), Query Frame = 0


Query: 1   MADYGGAISLSHQPPTSDSSSDNHSPPSRPLSAAAKP-KTPLSGGGASSSADTSGRKPRG 60
           MADYGGAISLSHQPPTS SSSD+HSPP+RP     KP +TP SGG ASS   ++ +KPRG
Sbjct: 1   MADYGGAISLSHQPPTSSSSSDDHSPPTRP---QTKPSRTPTSGGAASSVDTSTMKKPRG 60

Query: 61  RPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSV 120
           RPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLL+FARKRHVGLTVLSGSGSV
Sbjct: 61  RPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLHFARKRHVGLTVLSGSGSV 120

Query: 121 SNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLS-------SSSSSFGICL 180
           SNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKP S       S SSSFGICL
Sbjct: 121 SNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPHSLSPSPSPSPSSSFGICL 180

Query: 181 AGAQGQVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLP 240
           AGAQGQ                      VFGGIVGGKVTAASLVVVVAATF+NPVF+RLP
Sbjct: 181 AGAQGQ----------------------VFGGIVGGKVTAASLVVVVAATFINPVFHRLP 240

Query: 241 SEMAE-DDDGVDMAKPAINATDESPVAATTTSSATPMAVCVYNAPSPPDHAMPWGPSSRL 294
           SE  E +DD VDMAKP INATDESPV ATTTSSATPM VCVYNAPSPPDHAMPW PSSR 
Sbjct: 241 SETTEGEDDRVDMAKPTINATDESPVTATTTSSATPMTVCVYNAPSPPDHAMPWVPSSRS 277

[Close]

BLAST of Clc03G13940 vs. NCBI nr
Match: KAG7023829.1 (AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 345.5 bits (885), Expect = 4.5e-91
Identity = 212/295 (71.86%), Postives = 225/295 (76.27%), Query Frame = 0


Query: 1   MADYGGAISLSHQPPTSDSSSDNHSPPS-RPLSAAAKPKTPLSGGGASSSADTSGRKPRG 60
           MADYGGAISLSHQP TS SSS + S    RPLS AAKPK  L     SSS +T G+KPRG
Sbjct: 1   MADYGGAISLSHQPLTSSSSSSSSSSSDHRPLS-AAKPKNLL-----SSSVETVGKKPRG 60

Query: 61  RPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSV 120
           RPPGSKNKPKPPIVITKENES+MKPVVIEISAGNDVV++LL+FARKRHVG T+LSGSGSV
Sbjct: 61  RPPGSKNKPKPPIVITKENESAMKPVVIEISAGNDVVESLLHFARKRHVGFTILSGSGSV 120

Query: 121 SNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLSSSSSSFGICLAGAQGQV 180
           SNVTLRHPMSHSTSLSLHGPFSLVSLSGSFL NTTPFS    S SSSSFGICLAGAQGQ 
Sbjct: 121 SNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLGNTTPFS----SPSSSSFGICLAGAQGQ- 180

Query: 181 SLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLPSEMAEDD 240
                                VFGGIVGGKVTAASLVVVVAATF+NPVF+RLPSE  E+ 
Sbjct: 181 ---------------------VFGGIVGGKVTAASLVVVVAATFINPVFHRLPSETEEEG 240

Query: 241 DGVDMAKPAINATDESPVAATTTSSATPMAVCVYNA-PSPPDHAMPWGPSSRLSY 294
           + V   KP+ N  D SP AA T   ATPM  CVYNA PSP DH MPWG SSR SY
Sbjct: 241 EDV---KPSNNGGDGSPAAAAT---ATPMGGCVYNAPPSPADHGMPWGQSSRSSY 257

[Close]

BLAST of Clc03G13940 vs. NCBI nr
Match: XP_023516834.1 (AT-hook motif nuclear-localized protein 28-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 344.4 bits (882), Expect = 9.9e-91
Identity = 209/295 (70.85%), Postives = 224/295 (75.93%), Query Frame = 0


Query: 1   MADYGGAISLSHQPPTSDSSSDNHSPPSRPLSAAAKPKTPLSGGGASSSADTSGRKPRGR 60
           MADYGGAISLSHQP TS SSS + S   RPLS AAKPK  L     SSS ++ G+KPRGR
Sbjct: 1   MADYGGAISLSHQPLTSSSSSSSSSSDHRPLS-AAKPKNLL-----SSSVESVGKKPRGR 60

Query: 61  PPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSVS 120
           PPGSKNKPKPPIVITKENES+MK VVIEISAGNDVV++LL+FARKRHVG T+LSGSGSVS
Sbjct: 61  PPGSKNKPKPPIVITKENESAMKAVVIEISAGNDVVESLLHFARKRHVGFTILSGSGSVS 120

Query: 121 NVTLRHPMSHSTSLSLHGPFSLVSLSGSFLA-NTTPFSSKPLSSSSSSFGICLAGAQGQV 180
           NVTLRHPMSHSTSLSLHGPFSLVSLSGSFL  NTTPFS    S SSSSFGICLAGAQGQ 
Sbjct: 121 NVTLRHPMSHSTSLSLHGPFSLVSLSGSFLCNNTTPFS----SPSSSSFGICLAGAQGQ- 180

Query: 181 SLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLPSEMAEDD 240
                                VFGGIVGGKVTAASLVVVVAATF+NPVF+RLPSE  E+ 
Sbjct: 181 ---------------------VFGGIVGGKVTAASLVVVVAATFINPVFHRLPSETEEEG 240

Query: 241 DGVDMAKPAINATDESPVAATTTSSATPMAVCVYNA-PSPPDHAMPWGPSSRLSY 294
           + V   KP+ N  D SP AA  T + TPM  CVYNA PSP DH MPWG SSR SY
Sbjct: 241 EDV---KPSNNGADGSPAAAAATVTTTPMGGCVYNAPPSPADHGMPWGQSSRSSY 260

[Close]

BLAST of Clc03G13940 vs. ExPASy Swiss-Prot
Match: O23620 (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.5e-30
Identity = 86/222 (38.74%), Postives = 126/222 (56.76%), Query Frame = 0


Query: 16  TSDSSSDNHSPPSRPLSAAAKPKTPLSGGGASSSADTSGRKPRGRPPGSKNKPKPPIVIT 75
           T D   +N++     L++     +   GGG     D  GR+PRGRPPGSKNKPKPP++IT
Sbjct: 43  TVDDEDNNNNHQGLDLASGGGSGSSGGGGGHGGGGDVVGRRPRGRPPGSKNKPKPPVIIT 102

Query: 76  KENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSVSNVTLRHPMSHSTSLS 135
           +E+ ++++  ++E++ G DV D +  +AR+R  G+ VLSGSG+V+NV++R P +    ++
Sbjct: 103 RESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAGAVVT 162

Query: 136 LHGPFSLVSLSGSFLANTTPFSSKPLSSSSSSFGICLAGAQGQVSLNLIGYLTVNLMFMN 195
           L G F ++SLSGSFL         P    ++S  I LAG QGQ                 
Sbjct: 163 LQGTFEILSLSGSFL-------PPPAPPGATSLTIFLAGGQGQ----------------- 222

Query: 196 HILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLPSEMAE 238
                V GG V G++TAA  V+V+AA+F N  + RLP E  E
Sbjct: 223 -----VVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDE 235

[Close]

BLAST of Clc03G13940 vs. ExPASy Swiss-Prot
Match: Q9LTA2 (AT-hook motif nuclear-localized protein 17 OS=Arabidopsis thaliana OX=3702 GN=AHL17 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.8e-30
Identity = 76/182 (41.76%), Postives = 111/182 (60.99%), Query Frame = 0


Query: 55  RKPRGRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLS 114
           R+PRGRPPGSKNKPKPP+ +T++ +  M P ++E+ +GNDVV+ +  F R++ +G+ VLS
Sbjct: 56  RRPRGRPPGSKNKPKPPVFVTRDTDPPMSPYILEVPSGNDVVEAINRFCRRKSIGVCVLS 115

Query: 115 GSGSVSNVTLRH--PMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLSSSSSSFGICL 174
           GSGSV+NVTLR   P +  ++++ HG F L+S+S +FL      S  P    S+ F + L
Sbjct: 116 GSGSVANVTLRQPSPAALGSTITFHGKFDLLSVSATFLPPPPRTSLSP--PVSNFFTVSL 175

Query: 175 AGAQGQVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLP 234
           AG QGQ                      + GG V G + +A  V V+AA+F NP ++RLP
Sbjct: 176 AGPQGQ----------------------IIGGFVAGPLISAGTVYVIAASFNNPSYHRLP 213

[Close]

BLAST of Clc03G13940 vs. ExPASy Swiss-Prot
Match: Q9M2S3 (AT-hook motif nuclear-localized protein 15 OS=Arabidopsis thaliana OX=3702 GN=AHL15 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.9e-28
Identity = 92/231 (39.83%), Postives = 131/231 (56.71%), Query Frame = 0


Query: 10  LSHQPPTSDSSSDNHSPPSRPLSAAAKPKTPLSGGGASSSADTSGRKPRGRPPGSKNKPK 69
           L H   T++S S N    S+    +   +  +  G  S S   +GR+PRGRPPGSKNKPK
Sbjct: 46  LDHDFTTNNSGSPNTQTQSQEEQNSRDEQPAVEPGSGSGS---TGRRPRGRPPGSKNKPK 105

Query: 70  PPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSVSNVTLRHPMS 129
            P+V+TKE+ +S++  V+EI+ G DV ++L  FAR+R  G++VLSGSG V+NVTLR P +
Sbjct: 106 SPVVVTKESPNSLQSHVLEIATGADVAESLNAFARRRGRGVSVLSGSGLVTNVTLRQPAA 165

Query: 130 HSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLSSSSSSFGICLAGAQGQVSLNLIGYLTV 189
               +SL G F ++S+ G+FL    P S  P  ++++   I LAGAQGQ           
Sbjct: 166 SGGVVSLRGQFEILSMCGAFL----PTSGSP--AAAAGLTIYLAGAQGQ----------- 225

Query: 190 NLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLPSEMAEDDD 241
                      V GG V G + A+  V+V+AATF N  + RLP E  +  +
Sbjct: 226 -----------VVGGGVAGPLIASGPVIVIAATFCNATYERLPIEEEQQQE 245

[Close]

BLAST of Clc03G13940 vs. ExPASy Swiss-Prot
Match: O82166 (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.3e-28
Identity = 79/205 (38.54%), Postives = 120/205 (58.54%), Query Frame = 0


Query: 34  AAKPKTPLSGGGASSSADTSGRKPRGRPPGSKNKPKPPIVITKENESSMKPVVIEISAGN 93
           A+   + L GGG   S D   R+PRGRP GSKNKPKPP+++T+E+ ++++  ++E+ +G 
Sbjct: 57  ASNDNSGLGGGGGGGSGDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGC 116

Query: 94  DVVDTLLNFARKRHVGLTVLSGSGSVSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANT 153
           DV + +  +AR+R  G+ VLSG+G+V+NV++R P +    ++L G F ++SLSGSFL   
Sbjct: 117 DVFECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFL--- 176

Query: 154 TPFSSKPLSSSSSSFGICLAGAQGQVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAA 213
                 P    ++S  I LAGAQGQ                      V GG V G++ AA
Sbjct: 177 ----PPPAPPGATSLTIFLAGAQGQ----------------------VVGGNVVGELMAA 232

Query: 214 SLVVVVAATFVNPVFYRLPSEMAED 239
             V+V+AA+F N  + RLP +  E+
Sbjct: 237 GPVMVMAASFTNVAYERLPLDEHEE 232

[Close]

BLAST of Clc03G13940 vs. ExPASy Swiss-Prot
Match: O49662 (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.6e-28
Identity = 84/198 (42.42%), Postives = 116/198 (58.59%), Query Frame = 0


Query: 43  GGGASSSADTSGRKPRGRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNF 102
           GGG S       R+PRGRP GSKNKPKPPI+IT+++ ++++  V+EI  G D+V+++  F
Sbjct: 93  GGGGSGGDHQMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATF 152

Query: 103 ARKRHVGLTVLSGSGSVSNVTLRHPMSH---STSLSLHGPFSLVSLSGSFLANTTPFSSK 162
           AR+R  G+ V+SG+G+V+NVT+R P SH    + +SLHG F ++SLSGSFL    P ++ 
Sbjct: 153 ARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTAT 212

Query: 163 PLSSSSSSFGICLAGAQGQVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVV 222
            LS       + LAG QGQ                      V GG V G +  A  VVV+
Sbjct: 213 GLS-------VYLAGGQGQ----------------------VVGGSVVGPLLCAGPVVVM 261

Query: 223 AATFVNPVFYRLPSEMAE 238
           AA+F N  + RLP E  E
Sbjct: 273 AASFSNAAYERLPLEEDE 261

[Close]

BLAST of Clc03G13940 vs. ExPASy TrEMBL
Match: A0A5A7UQT7 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00140 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 5.3e-114
Identity = 244/303 (80.53%), Postives = 254/303 (83.83%), Query Frame = 0


Query: 1   MADYGGAISLSHQPPTSDSSSDNHSPPSRPLSAAAKP-KTPLSGGGASSSADTSG-RKPR 60
           MADYGGAISLSHQPPTS SSSD+HSPP+RP     KP KTP+S  GA+SSADTS  +KPR
Sbjct: 1   MADYGGAISLSHQPPTSSSSSDDHSPPTRP---QTKPNKTPIS--GAASSADTSTMKKPR 60

Query: 61  GRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGS 120
           GRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLL+FARKRHVGLTVLSGSGS
Sbjct: 61  GRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLHFARKRHVGLTVLSGSGS 120

Query: 121 VSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLS-------SSSSSFGIC 180
           VSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKP S       S SSSFGIC
Sbjct: 121 VSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPHSLSPSPSPSPSSSFGIC 180

Query: 181 LAGAQGQVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRL 240
           LAGAQGQ                      VFGGIVGGKVTAASLVVVVAATF+NPVF+RL
Sbjct: 181 LAGAQGQ----------------------VFGGIVGGKVTAASLVVVVAATFINPVFHRL 240

Query: 241 PSE-MAEDDDGVDMAKPAINATDESPVAATTTSSATPMAVCVYNAPSPPDHAMPWGPSSR 294
           PSE  AEDD+G+DMAKP INATDESPV ATTTSSATPM VCVYNAPSPPDHAMPW PSSR
Sbjct: 241 PSETAAEDDEGIDMAKPTINATDESPVTATTTSSATPMTVCVYNAPSPPDHAMPWVPSSR 276

[Close]

BLAST of Clc03G13940 vs. ExPASy TrEMBL
Match: A0A1S3BP06 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103491979 PE=4 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 5.3e-114
Identity = 244/303 (80.53%), Postives = 254/303 (83.83%), Query Frame = 0


Query: 1   MADYGGAISLSHQPPTSDSSSDNHSPPSRPLSAAAKP-KTPLSGGGASSSADTSG-RKPR 60
           MADYGGAISLSHQPPTS SSSD+HSPP+RP     KP KTP+S  GA+SSADTS  +KPR
Sbjct: 1   MADYGGAISLSHQPPTSSSSSDDHSPPTRP---QTKPNKTPIS--GAASSADTSTMKKPR 60

Query: 61  GRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGS 120
           GRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLL+FARKRHVGLTVLSGSGS
Sbjct: 61  GRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLHFARKRHVGLTVLSGSGS 120

Query: 121 VSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLS-------SSSSSFGIC 180
           VSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKP S       S SSSFGIC
Sbjct: 121 VSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPHSLSPSPSPSPSSSFGIC 180

Query: 181 LAGAQGQVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRL 240
           LAGAQGQ                      VFGGIVGGKVTAASLVVVVAATF+NPVF+RL
Sbjct: 181 LAGAQGQ----------------------VFGGIVGGKVTAASLVVVVAATFINPVFHRL 240

Query: 241 PSE-MAEDDDGVDMAKPAINATDESPVAATTTSSATPMAVCVYNAPSPPDHAMPWGPSSR 294
           PSE  AEDD+G+DMAKP INATDESPV ATTTSSATPM VCVYNAPSPPDHAMPW PSSR
Sbjct: 241 PSETAAEDDEGIDMAKPTINATDESPVTATTTSSATPMTVCVYNAPSPPDHAMPWVPSSR 276

[Close]

BLAST of Clc03G13940 vs. ExPASy TrEMBL
Match: A0A0A0LXI2 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629020 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.3e-112
Identity = 239/302 (79.14%), Postives = 249/302 (82.45%), Query Frame = 0


Query: 1   MADYGGAISLSHQPPTSDSSSDNHSPPSRPLSAAAKP-KTPLSGGGASSSADTSGRKPRG 60
           MADYGGAISLSHQPPTS SSSD+HSPP+RP     KP +TP SGG ASS   ++ +KPRG
Sbjct: 1   MADYGGAISLSHQPPTSSSSSDDHSPPTRP---QTKPSRTPTSGGAASSVDTSTMKKPRG 60

Query: 61  RPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSV 120
           RPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLL+FARKRHVGLTVLSGSGSV
Sbjct: 61  RPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLHFARKRHVGLTVLSGSGSV 120

Query: 121 SNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLS-------SSSSSFGICL 180
           SNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKP S       S SSSFGICL
Sbjct: 121 SNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPHSLSPSPSPSPSSSFGICL 180

Query: 181 AGAQGQVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLP 240
           AGAQGQ                      VFGGIVGGKVTAASLVVVVAATF+NPVF+RLP
Sbjct: 181 AGAQGQ----------------------VFGGIVGGKVTAASLVVVVAATFINPVFHRLP 240

Query: 241 SEMAE-DDDGVDMAKPAINATDESPVAATTTSSATPMAVCVYNAPSPPDHAMPWGPSSRL 294
           SE  E +DD VDMAKP INATDESPV ATTTSSATPM VCVYNAPSPPDHAMPW PSSR 
Sbjct: 241 SETTEGEDDRVDMAKPTINATDESPVTATTTSSATPMTVCVYNAPSPPDHAMPWVPSSRS 277

[Close]

BLAST of Clc03G13940 vs. ExPASy TrEMBL
Match: A0A6J1H9C1 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111461734 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 8.2e-91
Identity = 211/295 (71.53%), Postives = 224/295 (75.93%), Query Frame = 0


Query: 1   MADYGGAISLSHQPPTSDSSSDNHSPPS-RPLSAAAKPKTPLSGGGASSSADTSGRKPRG 60
           MADYGGAISLSHQP TS SSS + S    RPLS AAKPK  L     SSSA+T G+KPRG
Sbjct: 1   MADYGGAISLSHQPLTSSSSSSSSSSSDHRPLS-AAKPKNLL-----SSSAETVGKKPRG 60

Query: 61  RPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSV 120
           RPPGSKNKPKPPIVITKENES+MKPVVIEISAGNDVV++LL+FAR RHVG T+LSGSGSV
Sbjct: 61  RPPGSKNKPKPPIVITKENESAMKPVVIEISAGNDVVESLLHFARNRHVGFTILSGSGSV 120

Query: 121 SNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLSSSSSSFGICLAGAQGQV 180
           SNVTLRHPMSHSTSLSLHGPFSLVSLSGSFL NTTPF     S SSSSFGICLAGAQGQ 
Sbjct: 121 SNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLGNTTPF----CSPSSSSFGICLAGAQGQ- 180

Query: 181 SLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLPSEMAEDD 240
                                VFGGIVGGKVTAASLVVVVAATF+NPVF+RLPSE  E+ 
Sbjct: 181 ---------------------VFGGIVGGKVTAASLVVVVAATFINPVFHRLPSETEEEG 240

Query: 241 DGVDMAKPAINATDESPVAATTTSSATPMAVCVYNA-PSPPDHAMPWGPSSRLSY 294
           + V   KP+ N  D SP AA T   ATPM  CVYNA PSP DH MPWG SSR SY
Sbjct: 241 EDV---KPSNNGGDGSPAAAAT---ATPMGGCVYNAPPSPADHGMPWGQSSRSSY 257

[Close]

BLAST of Clc03G13940 vs. ExPASy TrEMBL
Match: A0A6J1JLJ2 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111485503 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 6.5e-88
Identity = 207/297 (69.70%), Postives = 223/297 (75.08%), Query Frame = 0


Query: 1   MADYGGAISLSHQPPTSDSSSDNHSPPS---RPLSAAAKPKTPLSGGGASSSADTSGRKP 60
           MADYGGAISLS QP TSDSSS + S  S   RPLS AAKPK  L     SSS +T G+KP
Sbjct: 1   MADYGGAISLSQQPLTSDSSSSSSSSSSSDHRPLS-AAKPKNLL-----SSSTETVGKKP 60

Query: 61  RGRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSG 120
           RGRPPGSKNKPKPPIVITKENES+MKPVVIEISAGNDVV++LL FAR RHVG T+LSGSG
Sbjct: 61  RGRPPGSKNKPKPPIVITKENESAMKPVVIEISAGNDVVESLLQFARIRHVGFTILSGSG 120

Query: 121 SVSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLSSSSSSFGICLAGAQG 180
           SVSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFL NTTPFS    S SSSSFGICLAGAQG
Sbjct: 121 SVSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLGNTTPFS----SPSSSSFGICLAGAQG 180

Query: 181 QVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLPSEMAE 240
           Q                      VFGGIVGGKVTAASLVVVVAATF+NPVF+RLPSE  E
Sbjct: 181 Q----------------------VFGGIVGGKVTAASLVVVVAATFINPVFHRLPSETEE 240

Query: 241 DDDGVDMAKPAINATDESPVAATTTSSATPMAVCVYNA-PSPPDHAMPWGPSSRLSY 294
           +++  +  KP+ N  D SP A    ++ TPM  CVYNA PSP D  MPWG SSR SY
Sbjct: 241 EEE--EEVKPSNNGGDGSP-ATAAAATTTPMGGCVYNAPPSPADLGMPWGQSSRSSY 262

[Close]

BLAST of Clc03G13940 vs. TAIR 10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 133.7 bits (335), Expect = 2.5e-31
Identity = 86/222 (38.74%), Postives = 126/222 (56.76%), Query Frame = 0


Query: 16  TSDSSSDNHSPPSRPLSAAAKPKTPLSGGGASSSADTSGRKPRGRPPGSKNKPKPPIVIT 75
           T D   +N++     L++     +   GGG     D  GR+PRGRPPGSKNKPKPP++IT
Sbjct: 43  TVDDEDNNNNHQGLDLASGGGSGSSGGGGGHGGGGDVVGRRPRGRPPGSKNKPKPPVIIT 102

Query: 76  KENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSVSNVTLRHPMSHSTSLS 135
           +E+ ++++  ++E++ G DV D +  +AR+R  G+ VLSGSG+V+NV++R P +    ++
Sbjct: 103 RESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAGAVVT 162

Query: 136 LHGPFSLVSLSGSFLANTTPFSSKPLSSSSSSFGICLAGAQGQVSLNLIGYLTVNLMFMN 195
           L G F ++SLSGSFL         P    ++S  I LAG QGQ                 
Sbjct: 163 LQGTFEILSLSGSFL-------PPPAPPGATSLTIFLAGGQGQ----------------- 222

Query: 196 HILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLPSEMAE 238
                V GG V G++TAA  V+V+AA+F N  + RLP E  E
Sbjct: 223 -----VVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDE 235

[Close]

BLAST of Clc03G13940 vs. TAIR 10
Match: AT5G49700.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 132.5 bits (332), Expect = 5.5e-31
Identity = 76/182 (41.76%), Postives = 111/182 (60.99%), Query Frame = 0


Query: 55  RKPRGRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLS 114
           R+PRGRPPGSKNKPKPP+ +T++ +  M P ++E+ +GNDVV+ +  F R++ +G+ VLS
Sbjct: 56  RRPRGRPPGSKNKPKPPVFVTRDTDPPMSPYILEVPSGNDVVEAINRFCRRKSIGVCVLS 115

Query: 115 GSGSVSNVTLRH--PMSHSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLSSSSSSFGICL 174
           GSGSV+NVTLR   P +  ++++ HG F L+S+S +FL      S  P    S+ F + L
Sbjct: 116 GSGSVANVTLRQPSPAALGSTITFHGKFDLLSVSATFLPPPPRTSLSP--PVSNFFTVSL 175

Query: 175 AGAQGQVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLP 234
           AG QGQ                      + GG V G + +A  V V+AA+F NP ++RLP
Sbjct: 176 AGPQGQ----------------------IIGGFVAGPLISAGTVYVIAASFNNPSYHRLP 213

[Close]

BLAST of Clc03G13940 vs. TAIR 10
Match: AT3G55560.1 (AT-hook protein of GA feedback 2 )

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-29
Identity = 92/231 (39.83%), Postives = 131/231 (56.71%), Query Frame = 0


Query: 10  LSHQPPTSDSSSDNHSPPSRPLSAAAKPKTPLSGGGASSSADTSGRKPRGRPPGSKNKPK 69
           L H   T++S S N    S+    +   +  +  G  S S   +GR+PRGRPPGSKNKPK
Sbjct: 46  LDHDFTTNNSGSPNTQTQSQEEQNSRDEQPAVEPGSGSGS---TGRRPRGRPPGSKNKPK 105

Query: 70  PPIVITKENESSMKPVVIEISAGNDVVDTLLNFARKRHVGLTVLSGSGSVSNVTLRHPMS 129
            P+V+TKE+ +S++  V+EI+ G DV ++L  FAR+R  G++VLSGSG V+NVTLR P +
Sbjct: 106 SPVVVTKESPNSLQSHVLEIATGADVAESLNAFARRRGRGVSVLSGSGLVTNVTLRQPAA 165

Query: 130 HSTSLSLHGPFSLVSLSGSFLANTTPFSSKPLSSSSSSFGICLAGAQGQVSLNLIGYLTV 189
               +SL G F ++S+ G+FL    P S  P  ++++   I LAGAQGQ           
Sbjct: 166 SGGVVSLRGQFEILSMCGAFL----PTSGSP--AAAAGLTIYLAGAQGQ----------- 225

Query: 190 NLMFMNHILDKVFGGIVGGKVTAASLVVVVAATFVNPVFYRLPSEMAEDDD 241
                      V GG V G + A+  V+V+AATF N  + RLP E  +  +
Sbjct: 226 -----------VVGGGVAGPLIASGPVIVIAATFCNATYERLPIEEEQQQE 245

[Close]

BLAST of Clc03G13940 vs. TAIR 10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.3e-29
Identity = 79/205 (38.54%), Postives = 120/205 (58.54%), Query Frame = 0


Query: 34  AAKPKTPLSGGGASSSADTSGRKPRGRPPGSKNKPKPPIVITKENESSMKPVVIEISAGN 93
           A+   + L GGG   S D   R+PRGRP GSKNKPKPP+++T+E+ ++++  ++E+ +G 
Sbjct: 57  ASNDNSGLGGGGGGGSGDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGC 116

Query: 94  DVVDTLLNFARKRHVGLTVLSGSGSVSNVTLRHPMSHSTSLSLHGPFSLVSLSGSFLANT 153
           DV + +  +AR+R  G+ VLSG+G+V+NV++R P +    ++L G F ++SLSGSFL   
Sbjct: 117 DVFECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFL--- 176

Query: 154 TPFSSKPLSSSSSSFGICLAGAQGQVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAA 213
                 P    ++S  I LAGAQGQ                      V GG V G++ AA
Sbjct: 177 ----PPPAPPGATSLTIFLAGAQGQ----------------------VVGGNVVGELMAA 232

Query: 214 SLVVVVAATFVNPVFYRLPSEMAED 239
             V+V+AA+F N  + RLP +  E+
Sbjct: 237 GPVMVMAASFTNVAYERLPLDEHEE 232

[Close]

BLAST of Clc03G13940 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 126.3 bits (316), Expect = 4.0e-29
Identity = 84/198 (42.42%), Postives = 116/198 (58.59%), Query Frame = 0


Query: 43  GGGASSSADTSGRKPRGRPPGSKNKPKPPIVITKENESSMKPVVIEISAGNDVVDTLLNF 102
           GGG S       R+PRGRP GSKNKPKPPI+IT+++ ++++  V+EI  G D+V+++  F
Sbjct: 93  GGGGSGGDHQMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATF 152

Query: 103 ARKRHVGLTVLSGSGSVSNVTLRHPMSH---STSLSLHGPFSLVSLSGSFLANTTPFSSK 162
           AR+R  G+ V+SG+G+V+NVT+R P SH    + +SLHG F ++SLSGSFL    P ++ 
Sbjct: 153 ARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTAT 212

Query: 163 PLSSSSSSFGICLAGAQGQVSLNLIGYLTVNLMFMNHILDKVFGGIVGGKVTAASLVVVV 222
            LS       + LAG QGQ                      V GG V G +  A  VVV+
Sbjct: 213 GLS-------VYLAGGQGQ----------------------VVGGSVVGPLLCAGPVVVM 261

Query: 223 AATFVNPVFYRLPSEMAE 238
           AA+F N  + RLP E  E
Sbjct: 273 AASFSNAAYERLPLEEDE 261

The following BLAST results are available for this feature:

BLAST of Clc03G13940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450342.1	1.1e-113	80.53	PREDICTED: AT-hook motif nuclear-localized protein 28-like [Cucumis melo] >KAA00...	[more]
XP_038880172.1	2.7e-112	80.20	AT-hook motif nuclear-localized protein 17-like [Benincasa hispida]	[more]
XP_004139130.1	2.7e-112	79.14	AT-hook motif nuclear-localized protein 17 [Cucumis sativus] >KGN66545.1 hypothe...	[more]
KAG7023829.1	4.5e-91	71.86	AT-hook motif nuclear-localized protein 17, partial [Cucurbita argyrosperma subs...	[more]
XP_023516834.1	9.9e-91	70.85	AT-hook motif nuclear-localized protein 28-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc03G13940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23620	3.5e-30	38.74	AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9LTA2	7.8e-30	41.76	AT-hook motif nuclear-localized protein 17 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9M2S3	1.9e-28	39.83	AT-hook motif nuclear-localized protein 15 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O82166	3.3e-28	38.54	AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O49662	5.6e-28	42.42	AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of Clc03G13940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQT7	5.3e-114	80.53	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BP06	5.3e-114	80.53	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103491979 ...	[more]
A0A0A0LXI2	1.3e-112	79.14	AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_1G6290...	[more]
A0A6J1H9C1	8.2e-91	71.53	AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1JLJ2	6.5e-88	69.70	AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111485...	[more]

BLAST of Clc03G13940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17800.1	2.5e-31	38.74	Predicted AT-hook DNA-binding family protein	[more]
AT5G49700.1	5.5e-31	41.76	Predicted AT-hook DNA-binding family protein	[more]
AT3G55560.1	1.4e-29	39.83	AT-hook protein of GA feedback 2	[more]
AT2G35270.1	2.3e-29	38.54	Predicted AT-hook DNA-binding family protein	[more]
AT4G22810.1	4.0e-29	42.42	Predicted AT-hook DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 83..225 e-value: 4.7E-18 score: 65.6
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 79..248 score: 27.920166
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 83..179 e-value: 4.16139E-17 score: 73.3886
IPR014476	AT-hook motif nuclear-localized protein 15-29	PIRSF	PIRSF016021	ESCAROLA	coord: 6..194 e-value: 4.8E-49 score: 165.1 coord: 184..286 e-value: 2.6E-9 score: 34.7
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 1..180 coord: 200..290
None	No IPR available	GENE3D	3.30.1330.80		coord: 82..239 e-value: 7.0E-17 score: 63.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..78
None	No IPR available	PANTHER	PTHR31100:SF63	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN	coord: 1..180 coord: 200..290
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 80..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G13940.2	Clc03G13940.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding