Clc03G13790 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGTGGATCATGGTTCTTTGATAAAGCTCTAATTCTATTCGAAGATCTCAAAGGAAACAAAAGCATCTCTAATCTGGATTTCAAGTACGCATCCTTTTGGATTCACTTTAACAATCTTCCCCTTGTAGGATTCACAAGGAAAATAGTAGGAGTGCTCGGAAATATGGTGGGAGAGTTAGAGAAAGTAGATCCGGAAGAAGAAAAAAGATGGTGGAACAAAACCCTGTGGATGCGCGTCAAAATGGATATTAGTAAACCTTTGAGGAGGTTGGTAAACGTGAAAGTCAGATCAATGGCCGAAGTGAGCAAGATACCAATAACCTATGAAAAATTGGGGGATTTTTGCTACGGTTACGGATTAATTAGGCATTTGTTAAAGGACTGTGAAACTCATCGAGGAACAATGGAGAAAGACTTACAATATAGTTCAATTCTTCATTTCAATGGGTCTATCCAAAATGGCGGAAAGGGGGGAAGCAAGGCCGGGAAATCCAAAGGAAAAAAGAGAAATGGGTGGAGGGCCAAAGAACAGCAACTACAGCAAAAGGGGGAACCAAGTCAAACACCGAAAGAGGGGAGACGAAAAGATGACCGAAGTAGATTGAATTTAGGTGCCCAATTGGAGGTTCAAATCTAGTTCTCTTGTGTAAATCTGGAGGGACATAACGAAAGTAAGGTCGAGATCGATCAAACTGAGAATAGGGATCTCCAAAAGAATCCAGTTCTAAGAAAGGAAAATCCAATGGATTAAGCCCCTATCGACGCTACCAAGGGAAGCAACGGAGTAACAGAGATGAACTGAGGCGGATCCAAGAAGACGAGGGGCGTATCCCGAGGAACAGTAACTTGGTCTGATGTGCGGTTGATGGGACAGATGGATAAGGAAGATCAGGTGAAGGACAAAGATTGTTGCCAGCCGGGGGAAAAGGCCAAGGATAATGGTGAGTGGGGCCAGCAAGTAGAAGAAGAAATAGGAATTAGTGAAAAACCTTACATGGACCTAGCTCATGAAAATATCTCAGGCTCTACAAAAGGAAAAGGAAGCAAAGAAGAAGTGGGCCTTAGTCCGTCTGAAAAGGGATTAAATTGGATAAGCCCATTCTCTGGGAAGGCCTTACAAGAAGGCAAAAACACGGTCAGAACATGGAATTGAAAGGACAAAATAAATCTGAAATCATTTCTGATCAAAAGAAAGGTTTAGACTCTAGTGGATTTCCTTTGTCTCAAAAAAGGATCTGCACAGGAGAGGGGATTTTAAGTGAGATATCGACGAAGGTTGCACTTCACCCTGCCAAATGTCATGAAAATCTAAAGTTGGAATGTTCGGGGAGCGAGCAACCCCCCAACATTCCGTCAACTGAAACAAGTTGTGGAGAGACAGAAGCTACAACTTGTTTTTCTTTCAGAGACTAGAATTAAACATGACATGGAGGAAAAGTTGAAAAAAGGTTTGAATTTGAGTGGCTGATTTAGTGTTTTCAGTTGCGGCAGAAGGGATGGCCTTTCCATTCTTTGGGAAGATGATCTTTAGGTTGAGGTTTTATCTTCGTCCTTTGGGCACATTAATGTTCTTGTCAACAGCCCAAAAGGTCTGTGGAGATTTACTGGGTTTTATGGAAATCTGGTGACAAGCTTAAGGAAGGATTCGTGGAAGCTCCTAGAAAGGCTTGCGGACGTCGGAAATTATCCCTAGCTAGTTGGAGGGGATTTCAATGA ATGGAAAGTGGATCATGGTTCTTTGATAAAGCTCTAATTCTATTCGAAGATCTCAAAGGAAACAAAAGCATCTCTAATCTGGATTTCAAGTACGCATCCTTTTGGATTCACTTTAACAATCTTCCCCTTGTAGGATTCACAAGGAAAATAGTAGGAGTGCTCGGAAATATGGTGGGAGAGTTAGAGAAAGTAGATCCGGAAGAAGAAAAAAGATGGTGGAACAAAACCCTGTGGATGCGCGTCAAAATGGATATTAGTAAACCTTTGAGGAGGTTGGTAAACGTGAAAGTCAGATCAATGGCCGAAGTGAGCAAGATACCAATAACCTATGAAAAATTGGGGGATTTTTGCTACGGTTACGGATTAATTAGGCATTTGTTAAAGGACTGTGAAACTCATCGAGGAACAATGGAGAAAGACTTACAATATAGTTCAATTCTTCATTTCAATGGGTCTATCCAAAATGGCGGAAAGGGGGGAAGCAAGGCCGGGAAATCCAAAGGAAAAAAGAGAAATGGGTGGAGGGCCAAAGAACAGCAACTACAGCAAAAGGGGGAACCAAGTCAAACACCGAAAGAGGGGAGACGAAAAGATGACCGAAGTAGATTGAATTTAGGTGCCCAATTGGAGATGGATAAGGAAGATCAGGTGAAGGACAAAGATTGTTGCCAGCCGGGGGAAAAGGCCAAGGATAATGGTGAGTGGGGCCAGCAAGTAGAAGAAGAAATAGGAATTAGTGAAAAACCTTACATGGACCTAGCTCATGAAAATATCTCAGGCTCTACAAAAGGAAAAGGAAGCAAAGAAGAAGTGGGCCTTAGTCCGTCTGAAAAGGGATTAAATTGGATAAGCCCATTCTCTGGGAAGGCCTTACAAGAAGGCAAAAACACGCCCAAAAGGTCTGTGGAGATTTACTGGGTTTTATGGAAATCTGGTGACAAGCTTAAGGAAGGATTCGTGGAAGCTCCTAGAAAGGCTTGCGGACGTCGGAAATTATCCCTAGCTAGTTGGAGGGGATTTCAATGA ATGGAAAGTGGATCATGGTTCTTTGATAAAGCTCTAATTCTATTCGAAGATCTCAAAGGAAACAAAAGCATCTCTAATCTGGATTTCAAGTACGCATCCTTTTGGATTCACTTTAACAATCTTCCCCTTGTAGGATTCACAAGGAAAATAGTAGGAGTGCTCGGAAATATGGTGGGAGAGTTAGAGAAAGTAGATCCGGAAGAAGAAAAAAGATGGTGGAACAAAACCCTGTGGATGCGCGTCAAAATGGATATTAGTAAACCTTTGAGGAGGTTGGTAAACGTGAAAGTCAGATCAATGGCCGAAGTGAGCAAGATACCAATAACCTATGAAAAATTGGGGGATTTTTGCTACGGTTACGGATTAATTAGGCATTTGTTAAAGGACTGTGAAACTCATCGAGGAACAATGGAGAAAGACTTACAATATAGTTCAATTCTTCATTTCAATGGGTCTATCCAAAATGGCGGAAAGGGGGGAAGCAAGGCCGGGAAATCCAAAGGAAAAAAGAGAAATGGGTGGAGGGCCAAAGAACAGCAACTACAGCAAAAGGGGGAACCAAGTCAAACACCGAAAGAGGGGAGACGAAAAGATGACCGAAGTAGATTGAATTTAGGTGCCCAATTGGAGATGGATAAGGAAGATCAGGTGAAGGACAAAGATTGTTGCCAGCCGGGGGAAAAGGCCAAGGATAATGGTGAGTGGGGCCAGCAAGTAGAAGAAGAAATAGGAATTAGTGAAAAACCTTACATGGACCTAGCTCATGAAAATATCTCAGGCTCTACAAAAGGAAAAGGAAGCAAAGAAGAAGTGGGCCTTAGTCCGTCTGAAAAGGGATTAAATTGGATAAGCCCATTCTCTGGGAAGGCCTTACAAGAAGGCAAAAACACGCCCAAAAGGTCTGTGGAGATTTACTGGGTTTTATGGAAATCTGGTGACAAGCTTAAGGAAGGATTCGTGGAAGCTCCTAGAAAGGCTTGCGGACGTCGGAAATTATCCCTAGCTAGTTGGAGGGGATTTCAATGA MESGSWFFDKALILFEDLKGNKSISNLDFKYASFWIHFNNLPLVGFTRKIVGVLGNMVGELEKVDPEEEKRWWNKTLWMRVKMDISKPLRRLVNVKVRSMAEVSKIPITYEKLGDFCYGYGLIRHLLKDCETHRGTMEKDLQYSSILHFNGSIQNGGKGGSKAGKSKGKKRNGWRAKEQQLQQKGEPSQTPKEGRRKDDRSRLNLGAQLEMDKEDQVKDKDCCQPGEKAKDNGEWGQQVEEEIGISEKPYMDLAHENISGSTKGKGSKEEVGLSPSEKGLNWISPFSGKALQEGKNTPKRSVEIYWVLWKSGDKLKEGFVEAPRKACGRRKLSLASWRGFQ Homology
BLAST of Clc03G13790 vs. NCBI nr
Match: XP_024955847.1 (uncharacterized protein LOC112498636 [Citrus sinensis]) HSP 1 Score: 116.7 bits (291), Expect = 3.9e-22 Identity = 94/339 (27.73%), Postives = 158/339 (46.61%), Query Frame = 0
BLAST of Clc03G13790 vs. NCBI nr
Match: XP_015382410.1 (uncharacterized protein LOC107175497 [Citrus sinensis]) HSP 1 Score: 112.8 bits (281), Expect = 5.7e-21 Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 0
BLAST of Clc03G13790 vs. NCBI nr
Match: XP_024037025.1 (uncharacterized protein LOC112096996 [Citrus clementina]) HSP 1 Score: 112.8 bits (281), Expect = 5.7e-21 Identity = 53/143 (37.06%), Postives = 82/143 (57.34%), Query Frame = 0
BLAST of Clc03G13790 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia]) HSP 1 Score: 111.3 bits (277), Expect = 1.6e-20 Identity = 72/197 (36.55%), Postives = 101/197 (51.27%), Query Frame = 0
BLAST of Clc03G13790 vs. NCBI nr
Match: TXG57565.1 (hypothetical protein EZV62_015394 [Acer yangbiense]) HSP 1 Score: 106.7 bits (265), Expect = 4.1e-19 Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 0
BLAST of Clc03G13790 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 8.0e-21 Identity = 72/197 (36.55%), Postives = 101/197 (51.27%), Query Frame = 0
BLAST of Clc03G13790 vs. ExPASy TrEMBL
Match: A0A5C7HLA0 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015394 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.0e-19 Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 0
BLAST of Clc03G13790 vs. ExPASy TrEMBL
Match: A0A5C7HB59 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022545 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 9.8e-19 Identity = 44/130 (33.85%), Postives = 78/130 (60.00%), Query Frame = 0
BLAST of Clc03G13790 vs. ExPASy TrEMBL
Match: A0A5C7GUN1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_027725 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.3e-18 Identity = 48/130 (36.92%), Postives = 79/130 (60.77%), Query Frame = 0
BLAST of Clc03G13790 vs. ExPASy TrEMBL
Match: A0A5C7IZA1 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_002521 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 3.7e-18 Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 0
BLAST of Clc03G13790 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding ) HSP 1 Score: 50.8 bits (120), Expect = 2.5e-06 Identity = 36/137 (26.28%), Postives = 63/137 (45.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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