Clc03G13760 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G13760
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	L10-interacting MYB domain-containing protein
Location	ClcChr03: 24230321 .. 24230939 (-)
RNA-Seq Expression	Clc03G13760
Synteny	Clc03G13760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCACTGTGAATTTTCAGCAATGTATCAGAAAGTGCATCTGCCTGGAAGTTACAATAGGAAAGAGAGACAAAATTACCTGGTTTGGACTACTAAAATGGACCATTTTCTTGCCAAGATTCTTGTCAAGCAAGTAAAAGAAGGAAATAGGGTTGATGGCACATGGACGCCTGCTGCATATACAGCAGCTCTTCAAGTCTTGAATGAAAACTTTGGTGGTGGTTTAACTAAAGAACAGGTCAGAAGTTGATTAAAACTTGGAAAAAACAGTTTCGGATTTTGAAGGAGCTTCTTGCTCATAAAGGGTTTGAATGGGATGAGGCAAAAAAGATGGTGGCTGCTGAAAATTCAGTGTGGAACAACTACATAAAGGTAAAATATCATCCTCTTTGATGTTAATTTATGAGCCTGCTTTAGGTTTTGCCATGTCTTGCAGTTTCTTAATTTCCTGTGATTTATAGGCACATCCTAATGCCAGACAATATCAGGGAAAATTTATCGAACTTTATGATGAATGGTGCAATATCATGGGTGAGCAAGCAATATCAACCTTTTCAGACGGTGGTGCAGAAGCTAAAGAAATCCGGCAAAAAGAAAGGACGGTTCAGACTCTTTGA

mRNA sequence

ATGTATCACTGTGAATTTTCAGCAATGTATCAGAAAGTGCATCTGCCTGGAAGTTACAATAGGAAAGAGAGACAAAATTACCTGGTTTGGACTACTAAAATGGACCATTTTCTTGCCAAGATTCTTGTCAAGCAAGTAAAAGAAGGAAATAGGGTTGATGGCACATGGACGCCTGCTGCATATACAGCAGCTCTTCAAGTCTTGAATGAAAACTTTGGTGGTGGTTTAACTAAAGAACAGTTTCGGATTTTGAAGGAGCTTCTTGCTCATAAAGGGTTTGAATGGGATGAGGCAAAAAAGATGGTGGCTGCTGAAAATTCAGTGTGGAACAACTACATAAAGGCACATCCTAATGCCAGACAATATCAGGGAAAATTTATCGAACTTTATGATGAATGGTGCAATATCATGGGTGAGCAAGCAATATCAACCTTTTCAGACGGTGGTGCAGAAGCTAAAGAAATCCGGCAAAAAGAAAGGACGGTTCAGACTCTTTGA

Coding sequence (CDS)

ATGTATCACTGTGAATTTTCAGCAATGTATCAGAAAGTGCATCTGCCTGGAAGTTACAATAGGAAAGAGAGACAAAATTACCTGGTTTGGACTACTAAAATGGACCATTTTCTTGCCAAGATTCTTGTCAAGCAAGTAAAAGAAGGAAATAGGGTTGATGGCACATGGACGCCTGCTGCATATACAGCAGCTCTTCAAGTCTTGAATGAAAACTTTGGTGGTGGTTTAACTAAAGAACAGTTTCGGATTTTGAAGGAGCTTCTTGCTCATAAAGGGTTTGAATGGGATGAGGCAAAAAAGATGGTGGCTGCTGAAAATTCAGTGTGGAACAACTACATAAAGGCACATCCTAATGCCAGACAATATCAGGGAAAATTTATCGAACTTTATGATGAATGGTGCAATATCATGGGTGAGCAAGCAATATCAACCTTTTCAGACGGTGGTGCAGAAGCTAAAGAAATCCGGCAAAAAGAAAGGACGGTTCAGACTCTTTGA

Protein sequence

MYHCEFSAMYQKVHLPGSYNRKERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAALQVLNENFGGGLTKEQFRILKELLAHKGFEWDEAKKMVAAENSVWNNYIKAHPNARQYQGKFIELYDEWCNIMGEQAISTFSDGGAEAKEIRQKERTVQTL

Homology

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BLAST of Clc03G13760 vs. NCBI nr
Match: XP_031736187.1 (uncharacterized protein At2g29880 [Cucumis sativus] >KGN66564.1 hypothetical protein Csa_007055 [Cucumis sativus])

HSP 1 Score: 237.3 bits (604), Expect = 9.6e-59
Identity = 121/165 (73.33%), Postives = 130/165 (78.79%), Query Frame = 0


Query: 9   MYQKVHLPGSY----NRKERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAA 68
           MYQK++LPGS     NRKERQNYL+WTTKMDH LA  LV+Q KEG++VDG W P    AA
Sbjct: 1   MYQKLYLPGSLPGSCNRKERQNYLLWTTKMDHLLATTLVEQEKEGSKVDGAWKPVE-CAA 60

Query: 69  LQVLNENFGGGLTKE-----------QFRILKELLAHKGFEWDEAKKMVAAENSVWNNYI 128
           LQVLNEN G GLTKE           +F ILKELLAHKGFEWDEAKKMVAAENSVWNNYI
Sbjct: 61  LQVLNENLGDGLTKEHVRSRLKTWKKRFHILKELLAHKGFEWDEAKKMVAAENSVWNNYI 120

Query: 129 KAHPNARQYQGKFIELYDEWCNIMGEQAISTFSDGGAEAKEIRQK 159
           KAHPNARQY+GKFIELYDEWC IMGE+AIS FSD  AE KEIR K
Sbjct: 121 KAHPNARQYRGKFIELYDEWCIIMGERAISIFSDDDAEVKEIRTK 164

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BLAST of Clc03G13760 vs. NCBI nr
Match: KAF3973412.1 (hypothetical protein CMV_003146 [Castanea mollissima])

HSP 1 Score: 179.1 bits (453), Expect = 3.1e-41
Identity = 89/161 (55.28%), Postives = 114/161 (70.81%), Query Frame = 0


Query: 3   HCEFSAMYQKVHLPGSYNRKERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYT 62
           H +   MY KV+   SYN K++  Y+ WT++MD  LA+ILV++VK+GN++D T  PAAY 
Sbjct: 9   HSQEQGMYHKVYETRSYNAKDKVKYVAWTSEMDRCLAEILVEEVKKGNKIDSTLKPAAYR 68

Query: 63  AALQVLNENFGGGLTKE-----------QFRILKELLAHKGFEWDEAKKMVAAENSVWNN 122
           AAL  LNENFG  LTKE           QF ILKELLAHKGF+WDE +KMV A+NSVWN+
Sbjct: 69  AALTALNENFGLDLTKEHIRNRLKTWRKQFGILKELLAHKGFKWDETRKMVIADNSVWND 128

Query: 123 YIKAHPNARQYQGKFIELYDEWCNIMG-EQAISTFSDGGAE 152
           Y KAHP+A+Q++ KFIE YDE C I+G +QA+ + SD   E
Sbjct: 129 YSKAHPDAKQFRAKFIENYDELCIIIGNDQAMKSVSDSDTE 169

[Close]

BLAST of Clc03G13760 vs. NCBI nr
Match: XP_030959168.1 (uncharacterized protein LOC115981123 [Quercus lobata])

HSP 1 Score: 177.2 bits (448), Expect = 1.2e-40
Identity = 88/158 (55.70%), Postives = 112/158 (70.89%), Query Frame = 0


Query: 9   MYQKVHLPGSYNRKERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAALQVL 68
           MY KV+   SYN K++  Y+ WT++MD  L +ILV++VK+GN++D T  PAAY AAL  L
Sbjct: 1   MYHKVYETRSYNAKDKVKYMAWTSEMDRCLTEILVEEVKKGNKIDSTLKPAAYRAALTAL 60

Query: 69  NENFGGGLTKE-----------QFRILKELLAHKGFEWDEAKKMVAAENSVWNNYIKAHP 128
           NENFG  LTKE           QF ILKELLAHKGF+WDE +KMV A+NSVWN+Y KAHP
Sbjct: 61  NENFGLDLTKEHIRNRLKTWRKQFGILKELLAHKGFKWDETRKMVIADNSVWNDYSKAHP 120

Query: 129 NARQYQGKFIELYDEWCNIMG-EQAISTFSDGGAEAKE 155
           +A+Q++ KFIE YDE C I+G +QA+ + SD   E  E
Sbjct: 121 DAKQFRAKFIENYDELCIIIGNDQAMESVSDSDTEINE 158

[Close]

BLAST of Clc03G13760 vs. NCBI nr
Match: XP_023877154.1 (uncharacterized protein LOC111989590 [Quercus suber])

HSP 1 Score: 173.7 bits (439), Expect = 1.3e-39
Identity = 86/155 (55.48%), Postives = 112/155 (72.26%), Query Frame = 0


Query: 9   MYQKVHLPGSYNRKERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAALQVL 68
           MY KV+   SYN K++  Y+ WT++MD  LA+ILV++VK+GN++D T  PAAY AAL  L
Sbjct: 1   MYHKVYETRSYNAKDKVKYMAWTSEMDRCLAEILVEEVKKGNKIDSTLKPAAYRAALTTL 60

Query: 69  NENFGGGLTKE-----------QFRILKELLAHKGFEWDEAKKMVAAENSVWNNYIKAHP 128
           NENFG  LTKE           QF ILKELLAH+GF+W+E +KMV A+NSVWN+Y KAHP
Sbjct: 61  NENFGLDLTKEHIRNRLKTWRKQFGILKELLAHEGFKWNETRKMVIADNSVWNDYSKAHP 120

Query: 129 NARQYQGKFIELYDEWCNIMG-EQAISTFSDGGAE 152
           +A+Q++ KFIE YDE C I+G +QA+ + SD   E
Sbjct: 121 DAKQFRAKFIENYDELCIIIGNDQAMESVSDSDTE 155

[Close]

BLAST of Clc03G13760 vs. NCBI nr
Match: KAG5038816.1 (hypothetical protein JHK86_019656 [Glycine max])

HSP 1 Score: 160.6 bits (405), Expect = 1.1e-35
Identity = 81/154 (52.60%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 6   FSAMYQKVHLPGSYNRKERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAAL 65
           FS M +KV+   S + KE+  Y+VWT +MD  L K+L +QVK+GN+VD    PAA+  AL
Sbjct: 35  FSGMNKKVYQTRSSSDKEKAKYMVWTNEMDKCLTKVLAEQVKKGNKVDNILKPAAFAGAL 94

Query: 66  QVLNENFGGGLTKE-----------QFRILKELLAHKGFEWDEAKKMVAAENSVWNNYIK 125
           + LNE +G  LTKE           QF +LKELLAH GF W+E KKMV A+NSVWN+YIK
Sbjct: 95  KTLNEKYGLYLTKEHIKNRLKTWRKQFGVLKELLAHSGFMWNETKKMVVADNSVWNDYIK 154

Query: 126 AHPNARQYQGKFIELYDEWCNIMG-EQAISTFSD 148
           AHP+AR ++ K IE YD+ C I+G +QAI++ SD
Sbjct: 155 AHPDARIFRAKSIENYDQLCTILGNDQAIASLSD 188

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BLAST of Clc03G13760 vs. ExPASy TrEMBL
Match: A0A0A0LZX0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629700 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.7e-59
Identity = 121/165 (73.33%), Postives = 130/165 (78.79%), Query Frame = 0


Query: 9   MYQKVHLPGSY----NRKERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAA 68
           MYQK++LPGS     NRKERQNYL+WTTKMDH LA  LV+Q KEG++VDG W P    AA
Sbjct: 1   MYQKLYLPGSLPGSCNRKERQNYLLWTTKMDHLLATTLVEQEKEGSKVDGAWKPVE-CAA 60

Query: 69  LQVLNENFGGGLTKE-----------QFRILKELLAHKGFEWDEAKKMVAAENSVWNNYI 128
           LQVLNEN G GLTKE           +F ILKELLAHKGFEWDEAKKMVAAENSVWNNYI
Sbjct: 61  LQVLNENLGDGLTKEHVRSRLKTWKKRFHILKELLAHKGFEWDEAKKMVAAENSVWNNYI 120

Query: 129 KAHPNARQYQGKFIELYDEWCNIMGEQAISTFSDGGAEAKEIRQK 159
           KAHPNARQY+GKFIELYDEWC IMGE+AIS FSD  AE KEIR K
Sbjct: 121 KAHPNARQYRGKFIELYDEWCIIMGERAISIFSDDDAEVKEIRTK 164

[Close]

BLAST of Clc03G13760 vs. ExPASy TrEMBL
Match: A0A7N2KMQ1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 5.7e-41
Identity = 88/158 (55.70%), Postives = 112/158 (70.89%), Query Frame = 0


Query: 9   MYQKVHLPGSYNRKERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAALQVL 68
           MY KV+   SYN K++  Y+ WT++MD  L +ILV++VK+GN++D T  PAAY AAL  L
Sbjct: 1   MYHKVYETRSYNAKDKVKYMAWTSEMDRCLTEILVEEVKKGNKIDSTLKPAAYRAALTAL 60

Query: 69  NENFGGGLTKE-----------QFRILKELLAHKGFEWDEAKKMVAAENSVWNNYIKAHP 128
           NENFG  LTKE           QF ILKELLAHKGF+WDE +KMV A+NSVWN+Y KAHP
Sbjct: 61  NENFGLDLTKEHIRNRLKTWRKQFGILKELLAHKGFKWDETRKMVIADNSVWNDYSKAHP 120

Query: 129 NARQYQGKFIELYDEWCNIMG-EQAISTFSDGGAEAKE 155
           +A+Q++ KFIE YDE C I+G +QA+ + SD   E  E
Sbjct: 121 DAKQFRAKFIENYDELCIIIGNDQAMESVSDSDTEINE 158

[Close]

BLAST of Clc03G13760 vs. ExPASy TrEMBL
Match: A0A2N9FX33 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19734 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.1e-39
Identity = 85/155 (54.84%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 9   MYQKVHLPGSYNRKERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAALQVL 68
           MY KV+   SYN KE+  Y+ WT++MD  L +ILV++VK+GN++D T+ PAAY AA+  L
Sbjct: 1   MYHKVYETRSYNAKEKVKYMAWTSEMDRCLTEILVEEVKKGNKIDSTFKPAAYRAAITAL 60

Query: 69  NENFGGGLTKE-----------QFRILKELLAHKGFEWDEAKKMVAAENSVWNNYIKAHP 128
            E FG  LTKE           QF ILKELLAHKGF+WDE +KMV A+NSVWN+Y KAHP
Sbjct: 61  KEKFGLELTKEHVRNRLKTWKKQFGILKELLAHKGFKWDETRKMVIADNSVWNDYSKAHP 120

Query: 129 NARQYQGKFIELYDEWCNIMG-EQAISTFSDGGAE 152
           +A+Q++ KFIE YDE C I+G +Q +++ SD  AE
Sbjct: 121 DAKQFRAKFIENYDELCIIVGNDQTVASSSDNDAE 155

[Close]

BLAST of Clc03G13760 vs. ExPASy TrEMBL
Match: A0A5B7BRF2 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_039932 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 7.3e-36
Identity = 77/155 (49.68%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 9   MYQKVHLPGSYNRKERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAALQVL 68
           MY+KV+   S N KE+  Y++WT +MD + +KILV+ V++G+++D    PA Y AAL  L
Sbjct: 1   MYRKVYQTRSSNAKEKVKYVIWTNEMDRYFSKILVEHVRKGSKLDNIIKPATYAAALVAL 60

Query: 69  NENFGGGLTKE-----------QFRILKELLAHKGFEWDEAKKMVAAENSVWNNYIKAHP 128
           NE FG  LTK+           QF +LKE+LA KGF+WD+A+KMV A+++VWN+YIKAHP
Sbjct: 61  NEKFGLDLTKDHLKNRLKTLRKQFGVLKEILAQKGFKWDKARKMVVADDAVWNDYIKAHP 120

Query: 129 NARQYQGKFIELYDEWCNIMG-EQAISTFSDGGAE 152
           +A+ ++ KFIE ++E C I+G +QAI++ SD GAE
Sbjct: 121 DAKHFRAKFIENFEELCIIVGNDQAIASCSDNGAE 155

[Close]

BLAST of Clc03G13760 vs. ExPASy TrEMBL
Match: A0A5J5C7S2 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_001686 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 7.3e-36
Identity = 75/155 (48.39%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 9   MYQKVHLPGSYNRKERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAALQVL 68
           MY+KV+   S N KE+  Y++WT +MD + +K+LV+ V++G+++D    PA Y AAL  L
Sbjct: 19  MYRKVYQTRSSNAKEKVKYVIWTNEMDRYFSKVLVEHVRKGSKLDNIIKPATYAAALTAL 78

Query: 69  NENFGGGLTKE-----------QFRILKELLAHKGFEWDEAKKMVAAENSVWNNYIKAHP 128
           NE FG  LTK+           QF +LKE+LA KGF+WD+A+KMV A++++WN+YIKAHP
Sbjct: 79  NEKFGLDLTKDHLKNRLKTWRKQFGVLKEILAQKGFKWDKARKMVVADDALWNDYIKAHP 138

Query: 129 NARQYQGKFIELYDEWCNIMG-EQAISTFSDGGAE 152
           +A+ ++ KFIE ++E C I+G +QAI++ SD GAE
Sbjct: 139 DAKHFRAKFIENFEELCTIVGNDQAIASCSDNGAE 173

[Close]

BLAST of Clc03G13760 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 3.6e-19
Identity = 51/157 (32.48%), Postives = 74/157 (47.13%), Query Frame = 0


Query: 3   HCEFSAMYQKVHLPGSYNRKERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYT 62
           H +  +  Q      S  +   +  + WT  MD+ L  +LV+QV  GNRV  T+  +A+ 
Sbjct: 300 HRDDGSAAQTSETKASQEQNSDRTRIFWTPPMDYHLIDLLVEQVNNGNRVGQTFITSAWN 359

Query: 63  AALQVLNENFGGGLTKE-----------QFRILKELLAHKGFEWDEAKKMVAAENSVWNN 122
             +   N  FG    K+            +  +K LL   GF WD  + MV A++ +WN 
Sbjct: 360 EMVTAFNAKFGSQHNKDVLKNRYKHLRRLYNDIKFLLEQNGFSWDARRDMVIADDDIWNT 419

Query: 123 YIKAHPNARQYQGKFIELYDEWCNIMGEQAISTFSDG 149
           YI+AHP AR Y+ K I  Y   C I G++     SDG
Sbjct: 420 YIQAHPEARSYRVKTIPSYPNLCFIFGKET----SDG 452

[Close]

BLAST of Clc03G13760 vs. TAIR 10
Match: AT4G02550.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 350 Blast hits to 284 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 13; Plants - 331; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 6.7e-18
Identity = 42/130 (32.31%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 22  KERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAALQVLNENFGGGLT---- 81
           K +   ++W+  MD  L + L  Q K GN+VD  +   AYTAA   +N  F   LT    
Sbjct: 14  KHKGRNVIWSVGMDKCLIEALAVQAKNGNKVDKCFNDKAYTAACVAVNTRFNLNLTSQKA 73

Query: 82  -------KEQFRILKELLAHKGFEWDEAKKMVAAE-NSVWNNYIKAHPNARQYQGKFIEL 140
                  K+++R+++++L+  GF W+ + KM+  E + +W  YI  +P+A+ ++GK IE+
Sbjct: 74  INRLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVNPDAKAFRGKQIEM 133

[Close]

BLAST of Clc03G13760 vs. TAIR 10
Match: AT4G02550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 370 Blast hits to 300 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 10; Plants - 354; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 6.7e-18
Identity = 42/130 (32.31%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 22  KERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAALQVLNENFGGGLT---- 81
           K +   ++W+  MD  L + L  Q K GN+VD  +   AYTAA   +N  F   LT    
Sbjct: 14  KHKGRNVIWSVGMDKCLIEALAVQAKNGNKVDKCFNDKAYTAACVAVNTRFNLNLTSQKA 73

Query: 82  -------KEQFRILKELLAHKGFEWDEAKKMVAAE-NSVWNNYIKAHPNARQYQGKFIEL 140
                  K+++R+++++L+  GF W+ + KM+  E + +W  YI  +P+A+ ++GK IE+
Sbjct: 74  INRLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVNPDAKAFRGKQIEM 133

[Close]

BLAST of Clc03G13760 vs. TAIR 10
Match: AT4G02550.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 6.7e-18
Identity = 42/130 (32.31%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 22  KERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAALQVLNENFGGGLT---- 81
           K +   ++W+  MD  L + L  Q K GN+VD  +   AYTAA   +N  F   LT    
Sbjct: 29  KHKGRNVIWSVGMDKCLIEALAVQAKNGNKVDKCFNDKAYTAACVAVNTRFNLNLTSQKA 88

Query: 82  -------KEQFRILKELLAHKGFEWDEAKKMVAAE-NSVWNNYIKAHPNARQYQGKFIEL 140
                  K+++R+++++L+  GF W+ + KM+  E + +W  YI  +P+A+ ++GK IE+
Sbjct: 89  INRLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVNPDAKAFRGKQIEM 148

[Close]

BLAST of Clc03G13760 vs. TAIR 10
Match: AT4G02550.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2). )

HSP 1 Score: 88.2 bits (217), Expect = 6.7e-18
Identity = 42/130 (32.31%), Postives = 73/130 (56.15%), Query Frame = 0


Query: 22  KERQNYLVWTTKMDHFLAKILVKQVKEGNRVDGTWTPAAYTAALQVLNENFGGGLT---- 81
           K +   ++W+  MD  L + L  Q K GN+VD  +   AYTAA   +N  F   LT    
Sbjct: 14  KHKGRNVIWSVGMDKCLIEALAVQAKNGNKVDKCFNDKAYTAACVAVNTRFNLNLTSQKA 73

Query: 82  -------KEQFRILKELLAHKGFEWDEAKKMVAAE-NSVWNNYIKAHPNARQYQGKFIEL 140
                  K+++R+++++L+  GF W+ + KM+  E + +W  YI  +P+A+ ++GK IE+
Sbjct: 74  INRLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVNPDAKAFRGKQIEM 133

The following BLAST results are available for this feature:

BLAST of Clc03G13760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031736187.1	9.6e-59	73.33	uncharacterized protein At2g29880 [Cucumis sativus] >KGN66564.1 hypothetical pro...	[more]
KAF3973412.1	3.1e-41	55.28	hypothetical protein CMV_003146 [Castanea mollissima]	[more]
XP_030959168.1	1.2e-40	55.70	uncharacterized protein LOC115981123 [Quercus lobata]	[more]
XP_023877154.1	1.3e-39	55.48	uncharacterized protein LOC111989590 [Quercus suber]	[more]
KAG5038816.1	1.1e-35	52.60	hypothetical protein JHK86_019656 [Glycine max]	[more]

BLAST of Clc03G13760 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc03G13760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZX0	4.7e-59	73.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629700 PE=4 SV=1	[more]
A0A7N2KMQ1	5.7e-41	55.70	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A2N9FX33	1.1e-39	54.84	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19734 PE=4 SV=1	[more]
A0A5B7BRF2	7.3e-36	49.68	Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_039932 PE=4 SV=1	[more]
A0A5J5C7S2	7.3e-36	48.39	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_001686 PE=4 SV=1	[more]

BLAST of Clc03G13760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G24960.2	3.6e-19	32.48	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02550.2	6.7e-18	32.31	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02550.1	6.7e-18	32.31	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02550.3	6.7e-18	32.31	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02550.4	6.7e-18	32.31	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 30..112 e-value: 7.1E-16 score: 59.0
None	No IPR available	PANTHER	PTHR46929	EXPRESSED PROTEIN	coord: 16..148
None	No IPR available	PANTHER	PTHR46929:SF12	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN	coord: 16..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G13760.2	Clc03G13760.2	mRNA