Clc03G13010 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G13010
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	exosome complex component CSL4
Location	ClcChr03: 21449988 .. 21469408 (-)
RNA-Seq Expression	Clc03G13010
Synteny	Clc03G13010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTACAACCGCCCTTGATAATTCACCAATTTCAAATATCCCTCGGCGGCTAAACTTTCGGTCGAGAATAAAGCAAAGGGCGGCAGTTAACAATTGAAGCTCTGTCTGTTGCGTTCCAATCTCAAAGGGCCACTTACCATACGATTTAGTGACGGCCACAGTGTGTATTCGACGGAGTTTGTGAGGAAGACAATGAAAGAAGGCGAGGAGGAGACTACTGAGTTCGTCACTCCAGGTGAAGTTCTCGGAAATTTTTCGGACTTCAAACCTGGAAGGGGCGCTTATGTCGCCAACAACACTGTTTATGCTTCTCTTTCTGGTTTCCGCCGCATTATTCCTCCCCCCTCTGACTCTTCGGATTTGGTACACTCTTTTACTTCTGTTCACTGTTTCTGTTGTTTGCGTCATCTTTTGATGTTTGGATTTTATTTTCTTTTGCATCCCTGTTTGTTTTTACTTCACATGGTTTGGTCTTGGGATGAAAGGAATTGCTTTCTTTCAACCCATGTGAATTGGGTTTGCCGTCCAAGGTTTAACTATGGAAAGTACTATTAGGTTAGCAAGGTTCATAAACATGTCTATGGTAATGTGAAATTACAAAATGAAGGGGAGATAATCCCACTCACCAACAAGTTACAAAAAAGAGGTCTAATTGGTGAAGATATGAGTTTGGCAATAATTACGAGATAAATTAGATAAAGAAGATTGAGTAGATGCAAAGCAAGTAACCAAATCCCTGAAAACATCCCTGCCAGTTTCTTGATTATGAAAAATTCTGGAGTCCTTTCAAACCATAGCCTCCAGAGAAGAGAAAACACCAATTAAACCAAAGAATCTTGGCCTGGGCCTTAAAAGGAGAATCACACGAAGTTGAAGGAGGGACATTTGAAGCTTTGTTTGGCCAACAACCCTGAAAACTGAAAACACTAAATAATCTTTCCCAACAACCAGCTGCAAATGGGAAACATTAGAAGAGATTCATCAACGATGAATCGCTCCTGTTACAAAGAATACACCAATTGTGGGAGAGCGCATAATTTCAAAGGATTGTATAGCATGTGTTCAACCTCTCAAGGAAGAGAATCCATAAAAGACCGACTTTTTATTACATGCCAAATAAGATCCGACTTTTGATTGTCTAGAGTTTCCTATTGCAAAATAAGCTAAGGAGATAGAAAAAGCTCCCCCACTTTCAAGTATCCCCAATCTCATATCATCCCTGTCATTCAACCTAAAACTAGACAACTTATTTGAGGGAATGTGTTAGACCCCTACTTAGATAAATAATAGGATTATTAGGGACATATTAATATGGTTATTAGAAGGGGCATATTAGTGATTGGATAGTAAGTTTGTTAGAGTTTTTAGTTATAAATAGAGGGAACGGGATAGGAGCAGGGGTGATGAATTTTGTGGGATTTCCTTAGTTGGAAATTTGGGAGAGTCTAGCCCTCTTGAAAGGCTAGTGGTTAACTTGTTACTTGTTCTTATGATATTATAGTGAATTTCCTCATATTTTCATATATTGCCATATTGTTGTGTTCTTGAGTGAGTTCTTGTTAGGAGGTATCTAATAGAATGACCCACTCTTCAACATCTTAGTCATTGAAATTTGTTCTAAATTTCAAATCCCAATTATTCTGAGTTTCAGTCTAGCAATGGCTCACCATCAAATCCTTGGAGTCAACAATTTTGTAGAGACAAGGGAAGTCAACATACAGGGTCTATCTATCAGCCATTTGTCCTTCCAAAATGTGCTTTGTCACCTATGCCCGTCTTAATTTTGTACCAATCATTGGGGAGAAGAATGTTCTACATGATTTGGGGTCAAGGACCTTTAAACAAGTGAGCATTTTTCATAGAATTCCACCACAATTTCTCATTCCATTTGTATTTAGAAGTAATGACCTGCCTCCACAAAGCATCATTTTCCCAAAGAAATATCCAGCCTTATTTAGCTAAGAGAGCTCAATTTTTAATGGCAAGATTACTAATGCTCAAGCCTCCCATCGTTGTCGGGAGGAGGTGGTTCCCCAGTTAATAAGATTGACAACACCCTCCTCTTTATTGCCTCTCCGAAAACAAGTCTCTAATCATCTTCTCCAAGAGTTAAGAACCTGGCTAGGGCAAGAGAAAATTGAAAAGTAGTACAATGGTATATTTGTGAGGACTGATTTAGCCAAGGTAATTCTACCACCTCTCGACAGAGATAAGCTTTTCCACTATGCTAGTTTTATATTCAATTTTATTAGCAATTGGTAGCCAAAAAGAAGATTTCCTTGGATTACCACTGAAGGTCATCCCCAAATACTCAAGTGTCCATACGCCAATAACACAACCCCACAGCTACCCCATTGCTGAAACCTCATCCCTATGACTTTTTAAACCAACCAAGAGACTTGGATGATCTTTGCACCTAAAATAACCTCAAAGCCAGCAACGAAAACCTTCAAATTATTAAGCATAGACTTGTCATGGACAGAGAAAAGGAGTGTCATCAACATGACAATTGAAAAATGTCACTTCCACCTCTTTTGGAGAAGCCCCCTATTGATTTATGCCTTGATTTATTCCTCAATATTTGTTGTAATTAGGTGTGATTATTTTGGTAGGATATTTTCTCCTTTTATGTTTAGGGTCTTCTCGCTATTTAAGACATACCTATGTATATTTATAAAGTAAGAAATTATGGGATTATTCCATAAGATTCTAATTTACCACCATGATATTAGAGCAAAAGCAAATAAAGCCCCAAAAGGAAAAAGCCCTAACCCTAGCCGCACCACCAACTTTTGCCACCTTCGCCACTGCTGCTGCTAACATTCGCTGTCAAACGCTGACGAACCATCTCAGACCCTTTTGAACAGTCGACGCGACCCCACAAAAGATCCATTTCGTTTGGTTTTTGTGCGAATCTGTTTCTGCTCAAAGACCCACGTACCTTTGACTTCATTTTTGTCACCTCTTATTGGAAGTTCGTGCTGTTCGTCCAAACTAAACAGGAACAAAGCCGGCAAAACAGAACTACAAAGGGGGAAAAATAAAAGCCTTCCAATTAATATTGATGTCTTGGATGGAGAACTTGGTCTCCCAATTAATCAAGATGGAGAGAGAAGTGTTGGTGATGCAAGGTTTAATCCTAGTGATTCTCCAAATAGTAAAATCCTTTTATTTAAGAACATCAAGGAGAAAGTCCCAGTCATGTCATAGGCCTTCTCAAAATCAAGGTACTGGCCACAAAGTCATCTAAGTAATTCATTAGCAATCAAAATGAGATCGAGGATTAACCTTCTATCAATGAGTGCTGATAGGCAAATGCTAGCTGTTTGATGGAGAACTTTTTTTAGTCTCTTGGCTAAGACTTTATCAATAAGTTTGTAAAGAATTGTAATCAAGCTAATTGGTTTGAAATCAGTCACTTTGGTAGCACGAGCTTTCATTAATAGAAAAATTCATGATTCCACTTTCAAAAAGGCTTTAGAGGACCCTAAGCACCTCCCTTTAATTGTGTTCCATACCTTTCAGAATGTCTCCAAGTGTTACCATTCGATTCTGGGGCCTGTTAGTTCTTAGATCATCAATACCTTCGTTAATTTCTTATTCAGAAAAAGGGTCCTGCTTTGAATATTAATAGGTTGCCAATCTAAATTTGAAGAAATTATTACCTTCGTGTGTTATTGTATTATATTAGGGATGGGACCAAAGGTGAACTTTTCCTCTTGTTTTCTCTTAAAACTTAGACAGAATAAAACAAGGGAGTGTCTTAAACCCAATCATGTGGTTTTCTTCCCCTTTTAAGCATACCTATTGTCACGTTCCTAGAAAATGGCCCAACAAATCACTCCAATGACGCCCAAGACTCGTGTAGCAAGGCTAAGGATGGGTCGGGGAAGAAGGGCCACAACGCCTTTAAGCATGGAACACGCAAGTGCCAAGGTGCCCAACATGGCTGCCAAGGTTGCCAGACAGCTCCCATGCCTTAGTGCCGATACAACCAAGGCCTGATGCCCATATGCTATATGAGCACCCCATCTAGCGTGTGCACTCGCACATGCCCAAGTGGTTGCGTAACCAGCCACTGGCGTGCGGCGTGTGCGCGTGTCTGCCAAGCAAGGCAGCGCTGCGCATATAGACGCATAATGAGGATGCCCGTCGTGCGTGTCGTGCGCGCCCATTGCCTGCTTTGCACGCGCGCCTTGTGCAAGTTTGAGGCACGACATTGCGCATTCTGCGCGCGCCCTATGCACACCTTGTGCGCATGACAAGCTCCAAACGCCCCTCAGTGGCCTTGACGCGTCTAGGAGGATTGGCGTGATGTTGGGCGGTGCCAGTGCCCACGCTTGTATGCCTGACATGTTCGGATGCTGCCAGAAGCCTTTAAACAAGGCTTGACTGCTCGCCCAGGGCCTGCACATCTCCGGAAGCCTTTAGACAAGCCTTGATGGTGCCAGTGTGCGCTAGACATGTCCAAACCCGTCTGGAAGGCTCTCGATGATGCTAGAATGTGCTAGAAGAGTTTGGACAGTGCTGGAAGATACTATGACGGTCGGACATCGACTCTACATAGTGCTAGAAGGCCCTAGAAGTGTCTAGAAGTATCTAGGACGGGCCTAATCTAGATGTATCTAGGCTTATCTACTTGTAACCAGCTCATGTACATAAAGAAGAGCCTAGAAGTGTCCATGACCGACATCTAAAGTCGGTCATCTTAACCTAAGTCGGTTGTAAACCCTTATAAATATCACAAGGGGGCCTCATTTGTAAGCATACCGAGGAATCTAAGCAATCTTCAAAGCTTGTATGATTCTCTCTAAGGCTGGTGAAGCTTTAAGCTCTCATTCACTCAAACTCCCCTAACGTCCTCCTTGCCTAACCACTTCCTCACTTTCTCACACGTTCATATCTAGGCAAGCACGACCCTAAAACCTCTATAGGCCTACTTGGTGTGTCTTTTGACATCAAGATCACCCAAGTGCTTTACGATTGGTTAGCTTGAAACTCTAACCACGTGACACTATGCTTATATGAGATCTTAATCTCAAACTTAATACTTGTCATAGAATAATGTCGTAATGGTTACTCTATTTTCATTTATCAATATTTTCCAATATCTATACCTTCAATTTGTCTGTCTAATTGGCTGAATGTTGACGCTATGGCTGATATGCATTGTTAGAGATCAACTGTGGAAGTGACTGGTCATAAGGCCCATGGTGCTGTTCCAGCTCCTGGATCTATTGTCATTGCTCGGGTAAGTTTCTTACTGCTTTTGCATCTATTTGTGCATGATATTTAAATTGCCATCACTCTTTAACTTTAGCACCTGATGATGTATGCTATAGCTGCTTCCACCCCCCTTTTCCCTTTCCCATCCGTTTTTTGAGTTTGACCTGTTGGCAAAAGTAATTTTGTATCTTTGGACCATTAGCCTCTTTTCATTTCTTCAATGAAAAGTGTTTTTCCTTTTTTAGATGAAAAACCAAACTTTCATCTAGAGAGAAAAAAAAAAAAAAAGAATTATTGTTTCTTTTTTAGATGGTAGCCAAAATCATTAGGAGTACTATAGCAGCACCAAAAGAATTTGATGATCGTTGGATTTTGGAATTATTTTCTATTGTTTTCAGTCTGCTTCTTAAGGTTGCTCATTTTAGTTAGTTTGCTTATTAGATTGAAGTTAATTGGAGGGAGGTAGATCTTAGCTGGTTATCAGAGGCCGTAACTTCCTTATTGCTGTAAGAATTAATTGTCTTCAGCTCCAACTGTGTATCCCTTTAGACCTGCTGAGTTTGTTTACACAGCAGATTGGAGCTAACTGAAATATAAAAAATTCTTTCCAATCACTTCATAATTTATAATTATGATCAGCAGGGTGCTTATCTTGTAGGTTGTAAAGGATGGGCTTGACTTTCTTTGTAGTTTTCCTTTTTCTTTTGGTTTTGTTTTGTTTGTTTTTTTTTTTTCAGAAGAAAAAACAAAGAAGGCTAACTTGGGGATTGGTCCAGTCGTAGCTTCAGGGAAACCCACTGGTTGTTGAAAATTTTCTCAATCCTCAACCGCCAGTGGGTTTTAAGGAAAACATCTTACATCTATTGATTGGTCCAGTTGTAGCTTCAAAGTCAAATGGTCTAATGCAGTGCAGGAAAGGCCATATCTCCAAAATCTCCCAGGCTAGTATCTTCCAAGACAAAGCTAAATCTCCTAAAGATGTCCTTGATTATGCTATTTTCAGTGCATTCTTTTGGTGTAAAAATTTACCGACCATCAAGAGCCGTAGTTTCTCTTATCTTATTTTTGAAAAAGGAAACAAGCCTCTTCATTAAGATAATGAAATGAGACTAATGCTCAAGTTACAAAAAGAAACCAAAACAACAAAACCCTAAGGATCAGCGGGTGCACCTGGGCATCTCAACTAGGTTGACACCCCTTTAGCATCCTCATCATATCCATAAATAGCAAAAAGGAATGAACGACAATACAATCAATGTCCAAAACATAGCTTGAAGCCCAGTATAACTAACTACTCACAAAGTGAAATGATACCAAATCATGATAAACCAATACAACATAACCAGGCTCAAATACAAAGCAATGCTGAACTGATGCTAAAAAGATAAAAGAACAAAATAAGAACAAGCAATTGATGTCAGAGGTCTAATGATTAGTGGAGATAAAAGCTCGCCAATTTAAACTTATATCTTGAATGGAATATTCAGCCAAGGCCTTGGAAAGTGAACACCATGAAGAAGCATTCAGTCGTGCTGTCTCAAATCGAGAAAATCAGATAGTTTCTCTTATCTTATTACTAATTGAAAACATCTTTTGTATTCCCTTTAATCAGGGCTCTTTTTGTATACCTTTGGACATTTCATCTATCAATGAAATAATATTTTATCCAAAAAGGCTGGTTTATCCAAATTATGGTTTGAACGCAATAATGGTTTTTCATAACAAGCTTCTTCTTGGGAATGGTTGGTTATGCTCATCTCGTTTGAAGGCCTCTTTATTGGGTTCTCTTTCTAGAAGCTCTGCAGGGTATTTGTCTCAATTGGAATGCTTTTATGTTGCTCTCATAATTCATTCATGTCTTGTTGCTCTATTTTATTTTCTACTATTGTTTTTTGTCTCCCCTTTTGGGTTTCTTATGTTTTTTAGCATTAGTCTCTTTTCATATTATCAATAAACAATGTTTGTTTTATTTGAAAAAAGAAAAAAAAAAAGAAAAAAAAAGAAAAAAAAAGAAAAAGAAAAAGAAAGAAAAAAAGGAATGTCGTACCTTTTGTTGCCTCTGGACTGTTTTTGTTGCAGTCACCTCACCACTACCAACGTTCTTTTGGATTGTCTAAATAAAGGCATCATAGGTTATCTTTTAGTGTGGCTTGGCTTCTTTTCAATGATAATATGCTTTTAAATTTAAAATAATACGTCAGATGGCTGTGATTATTCCTTTTGCCTTTTTAAGTCTGCTGAACACTACTAATTGAGGGTTACATCTTTAAACCCCCAAGGGCGTAAGACCCCATGAATTTTACTAACTATGATTTATCTTCCGACTCTTAACTCTCAACTTGTCAGTAGTTTTTTTTTTTCCTCTCTTGGTATCCGTCTTGATTGATGTTTAGATTATTAGTCTATGGATGTTTTGGACAGTATTTTTTATTATTCTTATCTAAATTGTAGGTAACAAAAGTAATGTCTAAAATGGCATCAGCTGATATCATGTGTGTTGGTCCAAAGTCTGTGAAAGAGAAGTTTACTGGAATTATAAGGTTTGAAATGTTCTTTTATGAAGCTTTTATTTATTCAGTTTTTTCTTTCTTTGCATGTATTTTTTCCTTTGCTGTAGAAAGCTCTTCTACCATGTTCCAATTTTCGATTGATTTTGCATTTTCTCAACAACTTTTACTCTATCTTATTAATTTATATTGCATGGAAATCAAATAATTTAAGTGTTATGTGAATTAGGACCAAATTTGTGTTGATGGAAACATTATTTTTGAAAGCGTAAAAAATATGCAATGTAAAGAACCTTAAGCACTTCACATTGTTGAGCATGAGCTTTGTGCTTGATTTTTTTTTTTTTTAATTTTTTAATTATTTTTTATTTTTTAAATTTGAAATAAATTAAGTTAAGAAAAACTTACACAAGAGAAAATATTGGTTCCTTTCCATTATTTGACCTGTCTTGAAGCCTGGTACACGTCCTATGGCTGTGTTATGGATGTGTGTTTCGAGCATGTACAAGATGTAGCTGTGACCAACATTGGTCTTTTGTAAAGATTAAAGACTAGCTTCTGCTTCCTAGGGAACAACCATCCATATACCTTAGGATAAATCTTGCTTTGAGTTGGAAGTAAAAAATGAATTGCGGTATAGTCATTCATTTCATAAACATCTTTTTCTTTCTTTTTCTAAAATATTAGTGACTTAGTGAGTGTTTGGGACACTTTGTGTAATTCTCATGTGATGACCGCTTAACTCTTCCACATTTCGTTATCAAGAAAACTTGTAGGATAAAGTCTAGGTAAATGGTTACTAATACTTGAACCTATACTTTCTAAGCACTTTATTATATACCTTGGCTCTTATTGACCATTAGAAGCCTTTTGTGAGATTTTTCTTAGAAACGTCCCATAACTTTTATTATATAGAAAATTTTAAATGATAAAAATTGGGTGCTTGTGGGCTCCCTCTGCAGCAAGTGCTTGTTGAACTCCACCTTGGTCCACAAATTGAGAATTGGCCGTAGAAGGATTGAATTGGGGCAAGTAATGGAACCTTAGAAAAGGTGGCGGTATATCTAAAACACATTGACACCAATAAATTCGAATTTAAGTTTTTTTACCCCTAATTGAAAGCTTGATTTCTTTGTTAAAGAAACTTGCTGTGAAGGTGGTAAACCATGACTAATAGTGTAATATGCCCATTGGTGTTGGAGTTTCCCCAATTTCTTTAATCAATGAAATGTTTCCTAAAAAAAAAACTTGTACAGTATGAAATGTGTAGGAGGACTATGGCTATTTCTCTGTGCACAATGTGATATAATTATGGGGCCCGTTGGAATTAAGTTGTGATTGGTACAGAGGGCACATCTAGAGAGTATTTAAAAATCTTGAAATTTGGTGATAGGTAAGTTTTTGGCTGTTGTTAGTTTGAAGTAAGAAGACGTAGAACTCTTGAAATTTTTCTTAGGATGTATTTTTTGAAGCTCTTTGAATGAAGTGGATTCTTTATTGAAAGAGGAGAAAAACTACTGCAGTTTGGAATGGTAGCTAATAAAAAATGGAATTAAGGCTTGGTGAGGTGGAGAAGACTATGGAGTTGGGGTAGATTTGAGAAGAGTTCTACAAATGGTTGTAAAGTAGTTGGAATGTATTTGGCATGCACAAGAAGGATTGATTGCAGTGGAGAAAGCTTAGGAGCATGATGGGAAGACACTTTGGCCTTTGGAGTAATCCTCATGAGATTGGTTGAAGAAAGAGAGAATAAAGCAGGAAAGCAAATAGAGGGAATAGTTTCCATAACAGATATGTGCTTAGGAAAACTGGAGATCCCCTTCTATAATGGTAACAATGTAGTGAATCAATGACGACTAAGAATTTGAAAGGTGTTGGCATCACTGAACAAATGGGAAAGATTGATCCAAAGCTAGTATTGCCACCTGAGTCGACAACCATTCCCTTGCTGTTACAGGAATATAGGGAGTTTGTTTGTGCTAATGCTTATTTGTGGTAGCATTGGGAGGAGGGATGAACGTATCTAGAACCCTAGTCCCTAGAAAGGGTCCTCGTGTAAATCATTTTTCTTTGTTAATTCTCCCTTGAGTAAATCTGTATTTGCCTTGTTGTGGTAGGCGAAAATTTTGAAGGTTAATTTTTTTGTCTGACATGTTCTCCATAACACTTTAGATAGGGTTTCGAGGAGGGTGCCCAATTTGATGGGTTGTTATGTTGCATTCTTTGTAGGAGAGCAGTGGAGGATCTTGGTCATATTCTTTGGGGATGTGCTTTGCTTATGCTGTATGAAGTCATTTTTGTAGGAAGTTGGCATAGATTCGGCCAGACATAGAGGTTGTAGAGAGATATTTGAGGAGCTCCTTTTCGCCGTCCTCCTTTTTGTGCCATTGTATGGGGGTTGTAGGGAGAAAAAGACCATAGGACTTTTAGAGGGTTTGAAAGGCCTCTGAGTCTAGTGAGATTTGGTTTAACGTGGTCCTTGTGGGTGTCCATGACTAACCTTCTTGTAATTATCTATAATGTTTTATTTTGTTGGATTTGAGGTCATTTTTGTAGGTTGCTTCTCCAATGGACTCTTCTTTTTATATGCTCTTGTATTCTTTCATTTAGTTATTCATTAAAAAAATAAATAAATGGAAAAAAAGGAATGTGGGGACTGCTAACTAGCAAAGTATGTGGCTTTGTTGTTTGTGCCCTGTTACTACTTCCCACCAATGCCAATTCCCAATAGAATATGGGAAAGCATGCCTTGTGCTTTTATTGAAGGCTTGCTAAATTAGACATGCTCCAAACTTTTTATTGATAGAAAAAAGGCTATTACTCTAAATACAATGAAACAAAATAGCAAGGAAAACCCGAGAACATAAAGGAGAGAACGGTCAGTAGGTGCATCCGCACATCTTAGCTAGTTTGACACACCCATAGCACCCTCATCATATCCCTATACTTGAATTCCAAAGAGACTTAATTACATGATTACAAAGAAAAAATAAATGCATTAAAATTAAGACATATATCGTGAAATGAGTAGTCCGCCAAGAGCTTGGATTGAGAACACTAAGAAGATGCTAGGAGACGAGCTAGAGCCAAAACAATCTGTCCATTTAGTGGATTTGTCATGGACTACTCTCTGATTGCGTTCCAACCAAATTTCTGAAATCAAGGCTTTAACTGCATTTGACCATAGAATCTGGGCTTTAGAGGATAGTAATGGGCCAACGAACAATTGAGAGATATTCTCCTTAAGTGATTGCCCAAAAACCCAATATAAGTTGAAATGGGAGACAACTTTGACCAACAGTTACGGGAGAATGAATAAATTAATCAACAGGTGCTGCAACTTCACCATTTGCTATCATTGTCAGAAAAAGGCCTTCGAAATCACTTGGTGCAATTCCTTTTCCTTCAAGCATCTCTTGTTCCGAATACATGGAAGTCGTATAAGTTTCTCTCTTCTCCCCTCTCCCCCCTCTCCTCTCCAATGTCACTTCTTTATCATATAATTGAATTATGCCACAAGCCGTGGAAGTAGAAAGCTGCAAAGTGGATGGGCTGACGTTCTGTATTTGGTTTGAAGTTGAACAGTACTGGGTTGAAGACATGGAAGCGAACAAACTCCTTTCCTATCTAGGTCTCACCTATGTTGGTTTATGGATAATATATCAGAACTAATTAGGGGGTCAAGTGATCGATTTTTCCAAAAAAGGGATGAGACGAATCAGGAGGGACAAGGCTTTCTAAATTCAAAGCTCCTTACCGGTGGATCATGCAATGTGAAGTATGGCTAGCAACTAGTGTTAGTTATTTTATTCATGTTCTGATTGGAGAATCTCAACAAGGCTGGCATACCTTTTTGTGTATGCTAAAAAGTTTCGATAAGAATAGTGAGTCCTTTGCTCATCAAAGAAATCCAAATTTAGGGTCGATTTCAGCTCAGATTATCAAGAATGCTCCAGTACCGCACAAGTCTAATGCCATTACTGTCAGTTATGCAGAGTAGTAAGGAAAAAGAGTGAGCTGTCATGCTTTGTTCTACCGATTGAAAAACAGGGCTCGTCATCAAAGGTCTTTGTTTTGCAAGCTGGAAAGCAAAGCAAGGAAGTGTATTGGATTCAGAGGAGTTAGGATGTGTAACAAGAAGATTTTAACAAATTATGGGTTATATCAAGATTGTTTGTGTTTAATGAATGGAAAGAAATCGGGTAACTTTTAGAAGATTTATTCAATGTAAAATTCATAATTAACCCACTATTCGTAGACAAAGCACTGATTAAATGTGATACAAGGCAGATAGAAGACTCCCAATTGTAGACAAAGCACCCCCTTCGGTCAGTTCCATTTATTATAGTGAGACTCCCAATTATTCATACTTATAGGAGGGGTAAGAAAGGTATTTCACTGATAGTGAGTGAGTTAGAGGGAATGTGGGAAGTGGAGGTGGTTTAAGGGGAGGTTTTTGGCAGAGGAGAATGTGTGGAATTTTGTGAGCATTTGGTGCTCGGAAGGGAGAAGATTCCAACCTTCTATTAAGGTTGTTGGGTAGCTGATTTTCTTTCTTGTTCTTCCCTTATTTCTTTTGTATTTCAGCAAGCTGTGTAACCAATCCTTATAGTTCATAAAATCTCTATCATTTGGATTGGATTGAAGTTCATCTGTGCAAGTTTCTCTTCAATTGTTAGATTCCTAACAATTCTGGTATCAGAGCGATATTTCACCCTGGGTAGTACGAGAAGCAAAACTAAGAGAGAAATGGAAGAGAAGATCGAGAGTAACACCAAGGGAATATTTGAGCTGAAGGAATGGATGATCGAGATGAGCAAGACGATTGATATCGTGGCAGCGAATGTCTAAAACTTGATGAACCTGAGAGAAAAAGGAGCGACATTGCAGTCTAGTTCGTATCCACTAGTGAGAGCGGAGGAATCGAACGAGGGCGAGAGTTCTCAGCGAAGGCATGGAAAGGAAGTTGATCGGAGCAAATATAAACGATTGGAAATGCCAATTTTTCAGGGGAGAATCCTGATTTGTGGGTGTATTGAGCAGAACATTTTTTCAAGATTCATGAGTTGGACAACTTGGAGAAAATCAAGGTAGCGATCATCGCTTTTGCTCCGAACGTGGTTGATTGGTTCTGATGGACTCATAACCGGCGACCTATCTTGTCGTGGGAGGCGTTGAAGGACTGGTTATTCAGCCGCTTCCGACCAACACAAGAGGGTACATTGTTGTCGAGGCTTCTTCGTATCCAGCAGGAAGGTACGTACGAAGATTACCTCAAGAAGTTTGAGATCTATTCGGCCCCATTGCCAAACACGGCAGAAGATGTGTTGGAGCAAGCGTTTTTGAACGGGCTATCACCGGAGATCAGGGCAGAGGTCAAGAGTCGTCATCCTGTGGGCTTGGATCAATGTATGAAAGAGGCCCAAGCTGTTCGTGATCGAAACATAGCCCTAAAATTGGGTTGGAAGGAAATGGGCCTTGAATGTGGAACGACCCAAACAGGGGGAACGACCAAGAGCTCGAAGAAGCCGACAAAAACTACCACTAAGAACGTCGTGATACAACAAGGGAGATTCGGGAAAGGAGACACCCTACTGGAGACTGACAGATGCAGAGGCAAAGGAGAAGCGTGACAAGGGACTATGCTTCAGGTGTGATGAGAGATATTTCAGAGGTCATAAGTGCAAATCGAAGGAGAATAGGGAGTTGAACCTACTGATTGCACACGAAGAAGAAGAGGGGTCAGAAGACGGTGATTTGTCGGTAGAGGAAGCACAGGAAGTAAAAAATCATGGAGGTCACAGACAATGTGGAGGTAGCATTGCGATCCATCTTGGGATTCTCGGCAAAGGGAACAATGAAATTGAAGGGCATTGTCGCGGGGAAGGAAGTGGTGGTAATGATTGATCACGCGCAACTCACAATTTCATTCATCAAAGAATAGTTGACTAACTCGAACTGCCGTTATCTGAAACTTCACACTACGGAGTAGTAGTAGGAAATGGGGTGGCGCTCAAAGGAAAAGGGATTTGCAAGGCGATTGTAGTGGTACTTCCCAATATAATGATTACGAAAGACTTTTTATCGTTGGAGTTAGGGCGAGTAGACGTGATTTTGGGGATGGTGTGGCTGTGTAACATGGGATACATGGAAGTGAATTGGTCGACGTTGACTATGACATTTGTTTCCGGAGACCGGAAGGTGACGTTGAAGGGAGATCCAACCTTAACTACGAAGGAAGTAACACTGAAGACTCTGACAGACACTTGGGAGGAGGAAGATTGTGGGCTTTTAATCGAATTTCAACATTTGGGGGTAGGGGAAGGCGCGGAACTTGAGAAAGAGCAAATGAGTACAGATGAAGTGCCCATCATGATCCAAGGGGTTTTGGACGAATTCAAGGAAAGTTTTGCAAAGCCCTCTTCTCTTCCACCCAAGCAGGCAGTAGATCATCGCATTAACACGAAGGCCGATGCGGTTCCTGTTAACGTGAGACCATATAAGTATAGCCACACTCAGAAGGATGAAATTGAGAAGTTGGTCAACAAAATGCTCTCAGTTGGAATAATCAGGCCCGGTCGTAGTCCCTATTCGAGTCCCATATTGTTGGTAAAGAAAAAAGATGGTGGATGGTGATTTTGTGTAGACTATAGAAGATTGAATCAAGCGACTATTTCGGACAAGTTCCCCCTACCGGTGATTGAGGAATTCATAGATGAACTCCATGGTTCGGTTATCTTCTTGAAGCTAGATTTACGTTCGGGATACCATCAGATTCGGATGGAGGAGGTTGATATCGAGAAGATGACCTTTTGAACGCATGAGGGCCACTATGAGTTCCTTGTTATGCTATTCGGATTGACTAACGCACCCGCCATTTTTCAATCTCCATGAATCAGATAGTTTCGACCTTTCCTTCGCAGGTGCGTACTTGTATTTTTTGATGATATATTAATCTACAGTCCAAATGAAGATACTCACACTAAACACTTATCCATGGTTCTGAATACTTTGCGAGAAAATCAATTATTTGCCAACGAGAATAAGTGCGTATTCGGCCCGTCACACATCAACTATTTGGGGCATTGGGTGTTGAAAAGAGGAGTAGAAGCTGACGGGGACAAGGTGAAAGCCATGGTTAACTGGCCGACTCGAAGAATGTAACTGAACTACGAGGATTTTTGGGGTTGACTGGATACTATCGTCATTTTGTTCAGAATTATGGACCAATAGCGGGACCGTTAACTCAACTCTTGTAGAAAGAGGGGTTTTGGTGGACAAGTGAAGCAGCAGAAGCTTTTGAGGTACTCAAGAGAGCCATGGTAACGCTTCTGGTACTTGCATTACCCAACTTGGATCAGCCTTTCGTAGTTGAAACTGACGCATCTGGCATCGGATTGGGGGCAGTTCTGATGCAAGATAGACAACCGATTGCTTATTTCAGCCAAGGGTTATCAGTAAGGGCTAGAAATAAGTCTATTTACGAACGGGAGCTCATGGCCGTAGTACTCTCAGTTCAGAAGTGGCGACATTATCTGCTAGGGAGGAAATTCACGGTGGTTTCAAATCAAAAGGCTCTAAAATTCCTCCTCGAAAACTTTGGGTTACGAATATGCCAATTGATGTAAACTGAAAACTTTGGGTTACGGCCTCTAGGTCTTCCATTGATGTAAACCGAAAACTTTGGGTTACGAATATACCAATTCATCTATTCCACCCATTTTGGATGAAAACCCATAAGAGTAAGAATTCTTTCAAGAAAACCCCAATCAACTCTATCAAATGCCTTCTCAAAATCCAACTTTAGGATCTACCCCTTCTTTTTCTTTGCTTGGTAGTCTTCAACTGCTTCATTAGCTATTAGGACTGGGTCTAGGATTTGTCTTTCCCTTATGATTGCGCTTTGTGTGTTAGAGATGAGACTTGGCATTCTTTTCCTTATCCTCTCGGCAAGAACTTTAGATAAAATCTTGTACATCGATGTTGGTAGACTTATAGATCTAAATTCTTTGACATATAAGGAGTCTTCATCGGTATAAGACAAATAAAATTCTCCTTAATACAAACATTTAGCCGCCCGTTTGTATTAAACTCATCAAACATTTTCTGGAAAATGTCCTTGAACTTCGGCCAACATTCAATAAAAACTCCACTATAAAACCATAAGGACCGGGGGCTTTATTTTCCCCAAGGGCCTTGATTGCTTCTTTGATTTTCTCACTCCGAAAAGGGGATATTAAAGAGGAATTTTGAGCATCTGAAACTTGCTTCCATGATATATCAGACGGAATGGATCTTGGCCCTTGGATTTGGTGACGAAGAGGCAAAATAACTCAGTATCTCTGATTCAATTTCCCGAAAAGATTGGAAGACTACCCCACTACTTTATAATAACTCAGTAATCATATTTCTCCTTCATATTACATGCTTTTCGGAAGTGTCAGTTTGCTTACAATGATGAAAGTGGCAAACAAGTAATTTTTTGTTTTTCATCCTGTTATAATGGTGTAATTAAATAATTAAATCAACTTAAAATTGAAAATGTTTATTAGCCTTCGTTACACTGCTTTTTCAATTAGGTGGTATAAATATATTCTATATTATTTGTCTTCTATTTGAAATGTCTTTTAATGCACTCTGTTTGGGAAATATTACTTTGGAAGATTATTCATGCCTTCTATCTTTAATTGCTTAAAAATCACTTCTGTAGGCAACAAGACGTTCGAGCAACAGAGATCGATAAAGTAGATATGCATTTGTCATTTCGTCCTGGTGACATCGTCAAAGCTCTTGTTGTATCCTTTCTGCCTGTAATTCCTCTGTTGCATGTTCATAAAGGATGCAAAAGACTTGGTCAGTAGATTTTTGGTACAGAATTCTTCTCCATTTGTCACATATGTTCAAAGGATCATCTTGTTAAGGTCAAATTACAAGCTTAGAACTTAACTTTTAGAATTGTGTAGTAGGTTCTTGAACTATAAAAGTGTTTATCTCTAAACCTTAGTTGTCTAATAGGTTTCTTGAACTTTTGAAGTGTCTAATAGGCTCATGAACCTTCAATTTTCTGTCTAATAGATCCCTAGTTTATTAGATATTTTTTAAATTCACCAACCTATCCTATTGAACACAAAATTAAAATGTTGGAGTTCTTAGTTCGTGACGCTTGAACTGATATTCATGAATTCTAACAAAATGTCACCTAGTTCATGAGCCTAGTAGATATTGAATTTAGGGACTTGTTAGACTTTCTTAAAGTTTAGTAATTCTATTATGCATAAAATTAGAAGTTTAGGAACTGAATAAACTTTATAAAGTTAAAGTCAATGGTTTATAAGACAAAATGCTAAAAATTTAAGGACTAAATTTGTAATTTAACCATCATGAAAATAAGTTCAAACAATGGGAACGGTAAGCAACAACTAATTCTTCCCACCATTAACTAGAATCATGAGAAACCAACAGTATCTATCAGTTTGTAAAATTATTATAACGATCCCATTGGGGGGCCAAAAATTGCAAAATAAAGAAAGTGTCTTGAAAACTGAAATTTTACCAGGTGTCGATGCATATATTTCTCAATTCTTTTACTTGGAGAATTATATTTCATCATTTTTCACACTAAAGAAATTTTCTTGGATGTTTTGATTTGAGTGCATCTATTTCTTCAATTTTCCTTGACAAAAGTTCTCTCCAAAAGCTTTCTCTTGGAGATGCAAGGGCTTATCATCTATCAACTGCAAAAAACGAACTCGGTGTTGTCTCTGCAGAAAGTACAGCAGGTAAAGACTACGGTACTTTTGTGAAGCCTAAAGGGTTATTATTTCCTTTCATGACATTTAAAGTAATCGCCATTCCTATCTTTCAAATTTAAAGAAATAGGGCAGCAAATTAATCGTTGAAAGCAGAGTTCAGCTTGACCATGAAAGAGCTGGAGCCATACATGTCCAACCATTTGAACAGATGCATATAACCTTAGATATTCTTAAAACAAAACAAAACAAAACAGAAAAAATCAGCAAGAAATATTAATTTCAAAACTTCATTTAAGTTTCAATTTTATGAAATAAAGATATTTGACAATGACAAGTATAGGAGCATCATTTCTGGTATTTTAGTAATTTGAATGTTCTGTTATTACCTGATTATGAATGAATATTGATCTCCATTAGCATGCCTCTTATTCAAAATGCCAATTCTTTTACAATTCAATATATTATATTTACTTGGTTTTTACTGCTCTTGCTTTTTTGAATTATTTGAACTATTCTTGTACTTGGGCCACATTTATCCTAAATGAATCGTAATAAATTAATAATAATTTTAAAAATGAGCCCCATTTGATTTTGTTTGATGTTGTTTACTTGTGTTCCATACCCACGGTGACATCTGGGGCCTACTTTCATATCTGTAATAAAAAAATGCAAACTGATTGACGAGTGGAGAGTGTTTAATCTAATTGCATTTGGGAATTATGGTTGATACCGTTACCATTACAGATACTGTTATAGTATGAGAATTATGAATTTGTCACATTTACTATTATCGTTAGTGTTTGAAATTAAACATTAATGGTAACAATAAATGTGATAGATTCATAATCCTAAGTAAATGTGATCAAAAGCAATCCCATTATGTTTTGCAATTGAGGCTCATTACGATTGATCCTTCAATGAAGTTTTGTTTCGATTACACCTACTTTCATTATGGATTGGGAAACTGGCCTTAGTTCCTCTTTTGAAAGGTTTTGTTGGAAAGGTGCTTTCAAGCACGCTTCTAGGTGCTAGGCACACAAAAGAAGGTGTGCGTTGAGCTTTCTAGAAGTCCATGGCTAGGGCTTTTTCATTATTTAACAAAAAAATAGTAACCATAAACAAAAATAAGACCCGATTAAATGTTGATGAATTAATCCCAAATGCAAAAACCCTTTTGTTTAGGATTTCTTAAATCTTTTTCCCCATAATCCTACTTCAACTATAGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATATATATATATATATATATATATATATATAATTATTATTATTATTTTTAATATCTATATATATATAGTGTCTTACAAAAAGGGAAAAAAAAAGTCACATTTCTTTTACAGCTTGTTGTGCTGAAGTCCTGGAAGGTTATTGCGTTTGCTTGTGGCCTTGAGCTTTAAAAAACACAGGTGGTAACTGTCCATTTTGGATTGAATGCAAAATTAGGTGCAGTGATGGTTCCCATAAGTTGGACAGAAATGCAGTGTCCATTAACAGGCCAAATTCAGCAAAGAAAAGTTGCCAAAGTTGGAGGAGGATGACTTAGCTTGGACAATGCTATTCCGTTTTTCCCTTTTATCTTATTTTTCTTTTCGTTTTCAATACTAGTTTCTCATTTATAATGTTGGGTATCGAGTTTTGAAAATCGAACATTGGATTATGGTAATTGCATACTTTTTGGAGGTGTCCTTTTCATATGGTATTGTTGATTCAGGATAGGAGGAAGAAGATTATTACTGTTGTAACATTTATTTTGTATGATTGAAGTTATATGGGTTTACATATCTGTATTATATAGAGGAGGAATATGTTCTAATATTGTTTTACATTCTCTCTCCCCCTCTCTCTATTATGTGAAAAATTAATAGAAAAAGTTTGAATGAGATTAAAAATGAATATAGTTTTTT

mRNA sequence

GTACAACCGCCCTTGATAATTCACCAATTTCAAATATCCCTCGGCGGCTAAACTTTCGGTCGAGAATAAAGCAAAGGGCGGCAGTTAACAATTGAAGCTCTGTCTGTTGCGTTCCAATCTCAAAGGGCCACTTACCATACGATTTAGTGACGGCCACAGTGTGTATTCGACGGAGTTTGTGAGGAAGACAATGAAAGAAGGCGAGGAGGAGACTACTGAGTTCGTCACTCCAGGTGAAGTTCTCGGAAATTTTTCGGACTTCAAACCTGGAAGGGGCGCTTATGTCGCCAACAACACTGTTTATGCTTCTCTTTCTGGTTTCCGCCGCATTATTCCTCCCCCCTCTGACTCTTCGGATTTGAGATCAACTGTGGAAGTGACTGGTCATAAGGCCCATGGTGCTGTTCCAGCTCCTGGATCTATTGTCATTGCTCGGGTAACAAAAGTAATGTCTAAAATGGCATCAGCTGATATCATGTGTGTTGGTCCAAAGTCTGTGAAAGAGAAGTTTACTGGAATTATAAGGCAACAAGACGTTCGAGCAACAGAGATCGATAAAGTAGATATGCATTTGTCATTTCGTCCTGGTGACATCGTCAAAGCTCTTGTTCTTTCTCTTGGAGATGCAAGGGCTTATCATCTATCAACTGCAAAAAACGAACTCGGTGTTGTCTCTGCAGAAAGTACAGCAGGTGCAGTGATGGTTCCCATAAGTTGGACAGAAATGCAGTGTCCATTAACAGGCCAAATTCAGCAAAGAAAAGTTGCCAAAGTTGGAGGAGGATGACTTAGCTTGGACAATGCTATTCCGTTTTTCCCTTTTATCTTATTTTTCTTTTCGTTTTCAATACTAGTTTCTCATTTATAATGTTGGGTATCGAGTTTTGAAAATCGAACATTGGATTATGGTAATTGCATACTTTTTGGAGGTGTCCTTTTCATATGGTATTGTTGATTCAGGATAGGAGGAAGAAGATTATTACTGTTGTAACATTTATTTTGTATGATTGAAGTTATATGGGTTTACATATCTGTATTATATAGAGGAGGAATATGTTCTAATATTGTTTTACATTCTCTCTCCCCCTCTCTCTATTATGTGAAAAATTAATAGAAAAAGTTTGAATGAGATTAAAAATGAATATAGTTTTTT

Coding sequence (CDS)

ATGAAAGAAGGCGAGGAGGAGACTACTGAGTTCGTCACTCCAGGTGAAGTTCTCGGAAATTTTTCGGACTTCAAACCTGGAAGGGGCGCTTATGTCGCCAACAACACTGTTTATGCTTCTCTTTCTGGTTTCCGCCGCATTATTCCTCCCCCCTCTGACTCTTCGGATTTGAGATCAACTGTGGAAGTGACTGGTCATAAGGCCCATGGTGCTGTTCCAGCTCCTGGATCTATTGTCATTGCTCGGGTAACAAAAGTAATGTCTAAAATGGCATCAGCTGATATCATGTGTGTTGGTCCAAAGTCTGTGAAAGAGAAGTTTACTGGAATTATAAGGCAACAAGACGTTCGAGCAACAGAGATCGATAAAGTAGATATGCATTTGTCATTTCGTCCTGGTGACATCGTCAAAGCTCTTGTTCTTTCTCTTGGAGATGCAAGGGCTTATCATCTATCAACTGCAAAAAACGAACTCGGTGTTGTCTCTGCAGAAAGTACAGCAGGTGCAGTGATGGTTCCCATAAGTTGGACAGAAATGCAGTGTCCATTAACAGGCCAAATTCAGCAAAGAAAAGTTGCCAAAGTTGGAGGAGGATGA

Protein sequence

MKEGEEETTEFVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRSTVEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQCPLTGQIQQRKVAKVGGG

Homology

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BLAST of Clc03G13010 vs. NCBI nr
Match: XP_038879159.1 (exosome complex component CSL4 [Benincasa hispida])

HSP 1 Score: 374.8 bits (961), Expect = 4.6e-100
Identity = 190/197 (96.45%), Postives = 193/197 (97.97%), Query Frame = 0


Query: 1   MKEGEEETTEFVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRST 60
           MKEGEEETTEFVTPGEVLG FSDF+PGRGAYV NNTVYASLSGFRR IPPP+DSSDLRST
Sbjct: 1   MKEGEEETTEFVTPGEVLGIFSDFRPGRGAYVFNNTVYASLSGFRRTIPPPTDSSDLRST 60

Query: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120
           VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRA E
Sbjct: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRAME 120

Query: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180
           IDKVDMHLSFRPGD+VKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ
Sbjct: 121 IDKVDMHLSFRPGDVVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180

Query: 181 CPLTGQIQQRKVAKVGG 198
           CPLTGQIQQRKVAKVGG
Sbjct: 181 CPLTGQIQQRKVAKVGG 197

[Close]

BLAST of Clc03G13010 vs. NCBI nr
Match: XP_008465048.1 (PREDICTED: exosome complex component CSL4 [Cucumis melo])

HSP 1 Score: 371.3 bits (952), Expect = 5.1e-99
Identity = 189/197 (95.94%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MKEGEEETTEFVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRST 60
           MKEGE+E TEFVTPGE+LGNFSDFKPGRGAYVA+NTVYASLSGFRRIIPPPSDSSDLRST
Sbjct: 1   MKEGEKE-TEFVTPGEILGNFSDFKPGRGAYVADNTVYASLSGFRRIIPPPSDSSDLRST 60

Query: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120
           VEVTGHKAHGAVPAPGSIVIARVTKVM+KMASADIMCVGPKSVKEKFTGIIRQQDVRATE
Sbjct: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120

Query: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180
           IDKVDMHLSFRPGDIVKALVLSLGDA+AYHLSTAKNELGVVSAESTAGA MVPISWTEMQ
Sbjct: 121 IDKVDMHLSFRPGDIVKALVLSLGDAKAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQ 180

Query: 181 CPLTGQIQQRKVAKVGG 198
           CP+TGQIQQRKVAKVGG
Sbjct: 181 CPVTGQIQQRKVAKVGG 196

[Close]

BLAST of Clc03G13010 vs. NCBI nr
Match: XP_004144376.1 (exosome complex component CSL4 [Cucumis sativus] >KGN58353.1 hypothetical protein Csa_000995 [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 3.7e-97
Identity = 187/197 (94.92%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MKEGEEETTEFVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRST 60
           MKEGE++ TEFVTPGEVLGNFSDFKPGRGAYV +NTVYASLSGFRRII PPSDSSDLRST
Sbjct: 1   MKEGEKD-TEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRST 60

Query: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120
           VEVTGHKAHGAVPAPGSIVI RVTKVM+KMASADIMCVGPKSVKEKFTGIIRQQDVRATE
Sbjct: 61  VEVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120

Query: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180
           IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGA MVPISWTEMQ
Sbjct: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQ 180

Query: 181 CPLTGQIQQRKVAKVGG 198
           CP+TGQIQQRKVAKVGG
Sbjct: 181 CPVTGQIQQRKVAKVGG 196

[Close]

BLAST of Clc03G13010 vs. NCBI nr
Match: KAG7020862.1 (Exosome complex component CSL4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 361.7 bits (927), Expect = 4.1e-96
Identity = 185/197 (93.91%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MKEGEEETTEFVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRST 60
           MKEGEEE TEFVTPGEVLG FSD KPG+GAYVANNTVYASLSGFRRII PP+DSSD R T
Sbjct: 1   MKEGEEE-TEFVTPGEVLGKFSDMKPGKGAYVANNTVYASLSGFRRIISPPTDSSDSRPT 60

Query: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120
           VEVTGHKAHGAVPAPGSIVIARVTKVM +MASADIMCVGPKSVKEKF+G+IRQQDVRATE
Sbjct: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMPRMASADIMCVGPKSVKEKFSGVIRQQDVRATE 120

Query: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180
           IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ
Sbjct: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180

Query: 181 CPLTGQIQQRKVAKVGG 198
           CPLTGQIQQRKVAKVGG
Sbjct: 181 CPLTGQIQQRKVAKVGG 196

[Close]

BLAST of Clc03G13010 vs. NCBI nr
Match: XP_023530831.1 (exosome complex component CSL4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.7 bits (927), Expect = 4.1e-96
Identity = 185/197 (93.91%), Postives = 190/197 (96.45%), Query Frame = 0


Query: 1   MKEGEEETTEFVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRST 60
           MKEGEEE TEFVTPGEVLG FSD KPG+GAYVANNTVYASLSGFRRII PP+DSSD R T
Sbjct: 3   MKEGEEE-TEFVTPGEVLGKFSDMKPGKGAYVANNTVYASLSGFRRIISPPTDSSDSRPT 62

Query: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120
           VEVTGHKAHGAVPAPGSIVIARVTKVM +MASADIMCVGPKSVKEKF+G+IRQQDVRATE
Sbjct: 63  VEVTGHKAHGAVPAPGSIVIARVTKVMPRMASADIMCVGPKSVKEKFSGVIRQQDVRATE 122

Query: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180
           IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ
Sbjct: 123 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 182

Query: 181 CPLTGQIQQRKVAKVGG 198
           CPLTGQIQQRKVAKVGG
Sbjct: 183 CPLTGQIQQRKVAKVGG 198

[Close]

BLAST of Clc03G13010 vs. ExPASy Swiss-Prot
Match: Q9Y3B2 (Exosome complex component CSL4 OS=Homo sapiens OX=9606 GN=EXOSC1 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.6e-34
Identity = 84/186 (45.16%), Postives = 113/186 (60.75%), Query Frame = 0


Query: 11  FVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRSTVEVTGHKAHG 70
           +  PGE L N  +  PG G Y  +  +++SL+G        S  +     V V       
Sbjct: 7   YCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLM----KSSENGALPVVSVVRETESQ 66

Query: 71  AVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDKVDMHLSF 130
            +P  G+IV  +V+ + S+ A   I+ VG   +K  F G IR++DVRATE DKV+++ SF
Sbjct: 67  LLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSF 126

Query: 131 RPGDIVKALVLSLGDARA-YHLSTAKNELGVVSAESTAGAVMVPISWTEMQCPLTGQIQQ 190
           RPGDIV A V+SLGDA++ Y L+TA+NELGVV A S +G  MVPISW EMQCP T   + 
Sbjct: 127 RPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTKEF 186

Query: 191 RKVAKV 196
           RKVA+V
Sbjct: 187 RKVARV 188

[Close]

BLAST of Clc03G13010 vs. ExPASy Swiss-Prot
Match: Q9DAA6 (Exosome complex component CSL4 OS=Mus musculus OX=10090 GN=Exosc1 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.0e-33
Identity = 82/186 (44.09%), Postives = 116/186 (62.37%), Query Frame = 0


Query: 11  FVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRSTVEVTGHKAHG 70
           +  PGE L N  +  PG G Y  +  +++SL+G    +   S++  +   V V       
Sbjct: 7   YCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAG---CLMKTSENGAV-PVVSVMRETESQ 66

Query: 71  AVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDKVDMHLSF 130
            +P  G++V  +V+ + S+ A   I+ VG   +K  F G IR++D+RATE DKV+++ SF
Sbjct: 67  LLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEIYKSF 126

Query: 131 RPGDIVKALVLSLGDARA-YHLSTAKNELGVVSAESTAGAVMVPISWTEMQCPLTGQIQQ 190
           RPGDIV A V+SLGDA++ Y L+TA+NELGVV A S +G  MVPISW EMQCP T   + 
Sbjct: 127 RPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTKEF 186

Query: 191 RKVAKV 196
           RKVA+V
Sbjct: 187 RKVARV 188

[Close]

BLAST of Clc03G13010 vs. ExPASy Swiss-Prot
Match: O59821 (Exosome complex component csl4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=csl4 PE=3 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 7.4e-24
Identity = 71/184 (38.59%), Postives = 108/184 (58.70%), Query Frame = 0


Query: 12  VTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRSTVEVTGHKAHGA 71
           V PG+V+   +    G G     + + ++ +G   I  P  +S      VE T       
Sbjct: 4   VLPGQVVARGA--PNGEGTVKRGDYIISTRTG---IFDPEKNSVTYPRKVEET-----AV 63

Query: 72  VPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDKVDMHLSFR 131
           +P  GSIV+ARV+++ ++ A+ +I  V     K++F G+I  QD+RATE +KV +  SFR
Sbjct: 64  LPNVGSIVLARVSRINARQATVNISVVDDVCTKDEFQGVIHVQDIRATEKNKVKVQNSFR 123

Query: 132 PGDIVKALVLSLGDARAYHLSTAKNELGVVSAEST-AGAVMVPISWTEMQCPLTGQIQQR 191
           PGDIV+ALV+SLGD  +Y L+TA+N+LGV+ A+S+  G  M P+ +  MQ   +G  + R
Sbjct: 124 PGDIVRALVISLGDGSSYFLTTARNDLGVIFAQSSETGEQMFPVDYQHMQTK-SGYTEMR 176

Query: 192 KVAK 195
           K AK
Sbjct: 184 KCAK 176

[Close]

BLAST of Clc03G13010 vs. ExPASy Swiss-Prot
Match: P53859 (Exosome complex component CSL4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CSL4 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-18
Identity = 61/173 (35.26%), Postives = 87/173 (50.29%), Query Frame = 0


Query: 58  RSTVEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPK---------------- 117
           R T +   +     +P  G IV+ RVT++  + A+ +I+ V  K                
Sbjct: 118 RKTNKYANNDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPIDSGIGSNGSGIV 177

Query: 118 ------------------SVKEKFTGIIRQQDVRATEIDKVDMHLSFRPGDIVKALVLSL 177
                              + E F GIIR QDVR+T+ D+V +   F+PGDIV+A VLSL
Sbjct: 178 AAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSL 237

Query: 178 GDARAYHLSTAKNELGVVSAEST--AGAVMVPISWTEMQCPLTGQIQQRKVAK 195
           GD   Y+L+TA+N+LGVV A +   AG +M    W  M  P+TG  ++RK AK
Sbjct: 238 GDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAK 290

[Close]

BLAST of Clc03G13010 vs. ExPASy TrEMBL
Match: A0A1S3CMV8 (exosome complex component CSL4 OS=Cucumis melo OX=3656 GN=LOC103502755 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.5e-99
Identity = 189/197 (95.94%), Postives = 195/197 (98.98%), Query Frame = 0


Query: 1   MKEGEEETTEFVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRST 60
           MKEGE+E TEFVTPGE+LGNFSDFKPGRGAYVA+NTVYASLSGFRRIIPPPSDSSDLRST
Sbjct: 1   MKEGEKE-TEFVTPGEILGNFSDFKPGRGAYVADNTVYASLSGFRRIIPPPSDSSDLRST 60

Query: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120
           VEVTGHKAHGAVPAPGSIVIARVTKVM+KMASADIMCVGPKSVKEKFTGIIRQQDVRATE
Sbjct: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120

Query: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180
           IDKVDMHLSFRPGDIVKALVLSLGDA+AYHLSTAKNELGVVSAESTAGA MVPISWTEMQ
Sbjct: 121 IDKVDMHLSFRPGDIVKALVLSLGDAKAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQ 180

Query: 181 CPLTGQIQQRKVAKVGG 198
           CP+TGQIQQRKVAKVGG
Sbjct: 181 CPVTGQIQQRKVAKVGG 196

[Close]

BLAST of Clc03G13010 vs. ExPASy TrEMBL
Match: A0A0A0L935 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G627150 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.8e-97
Identity = 187/197 (94.92%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 1   MKEGEEETTEFVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRST 60
           MKEGE++ TEFVTPGEVLGNFSDFKPGRGAYV +NTVYASLSGFRRII PPSDSSDLRST
Sbjct: 1   MKEGEKD-TEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRST 60

Query: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120
           VEVTGHKAHGAVPAPGSIVI RVTKVM+KMASADIMCVGPKSVKEKFTGIIRQQDVRATE
Sbjct: 61  VEVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120

Query: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180
           IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGA MVPISWTEMQ
Sbjct: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQ 180

Query: 181 CPLTGQIQQRKVAKVGG 198
           CP+TGQIQQRKVAKVGG
Sbjct: 181 CPVTGQIQQRKVAKVGG 196

[Close]

BLAST of Clc03G13010 vs. ExPASy TrEMBL
Match: A0A6J1F6G8 (exosome complex component CSL4 OS=Cucurbita moschata OX=3662 GN=LOC111441251 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 9.8e-96
Identity = 183/197 (92.89%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 1   MKEGEEETTEFVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRST 60
           MKEGEEE TEFVTPGEVLG FSD KPG+GAYVANNTVYASLSGFRRII PP+DSSD R T
Sbjct: 1   MKEGEEE-TEFVTPGEVLGKFSDMKPGKGAYVANNTVYASLSGFRRIISPPTDSSDSRPT 60

Query: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120
           VEVTGHKAHGAVPAPGSIV ARVTKVM +MASADIMCVGPKSVKEKF+G+IRQQDVRATE
Sbjct: 61  VEVTGHKAHGAVPAPGSIVTARVTKVMPRMASADIMCVGPKSVKEKFSGVIRQQDVRATE 120

Query: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180
           IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVM+PISWTEMQ
Sbjct: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMIPISWTEMQ 180

Query: 181 CPLTGQIQQRKVAKVGG 198
           CPLTGQIQQRKVAKVGG
Sbjct: 181 CPLTGQIQQRKVAKVGG 196

[Close]

BLAST of Clc03G13010 vs. ExPASy TrEMBL
Match: A0A6J1IH52 (exosome complex component CSL4 OS=Cucurbita maxima OX=3661 GN=LOC111472912 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.3e-95
Identity = 184/197 (93.40%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 1   MKEGEEETTEFVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRST 60
           MK GEEE TEFVTPGEVLG FSD KPG+GAYVANNTVYASLSGFRRII PP+DSSD R T
Sbjct: 5   MKVGEEE-TEFVTPGEVLGKFSDMKPGKGAYVANNTVYASLSGFRRIISPPTDSSDSRPT 64

Query: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120
           VEVTGHKAHGAVPAPGSIVIARVTKVM +MASADIMCVGPKSVKEKF+G+IRQQDVRATE
Sbjct: 65  VEVTGHKAHGAVPAPGSIVIARVTKVMPRMASADIMCVGPKSVKEKFSGVIRQQDVRATE 124

Query: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180
           IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ
Sbjct: 125 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 184

Query: 181 CPLTGQIQQRKVAKVGG 198
           CPLTGQIQQRKVAKVGG
Sbjct: 185 CPLTGQIQQRKVAKVGG 200

[Close]

BLAST of Clc03G13010 vs. ExPASy TrEMBL
Match: A0A6J1DE54 (exosome complex component CSL4 OS=Momordica charantia OX=3673 GN=LOC111019593 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93
Identity = 181/198 (91.41%), Postives = 187/198 (94.44%), Query Frame = 0


Query: 1   MKEGEEETTEFVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRST 60
           MKE EE  T+FVTPGEVLG  SD K G+GAYVANNTVYASLSGFRRI+PPP +SSD R T
Sbjct: 1   MKEAEE--TQFVTPGEVLGKPSDLKSGKGAYVANNTVYASLSGFRRILPPPPNSSDSRPT 60

Query: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120
           VEVTGHKAHGAVPAPGS+VIARVT VMS+MASADIMCVGPKSVKEKFTGIIRQQDVRATE
Sbjct: 61  VEVTGHKAHGAVPAPGSVVIARVTNVMSRMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120

Query: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180
           IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ
Sbjct: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180

Query: 181 CPLTGQIQQRKVAKVGGG 199
           CPLTGQIQQRKVAKVGGG
Sbjct: 181 CPLTGQIQQRKVAKVGGG 196

[Close]

BLAST of Clc03G13010 vs. TAIR 10
Match: AT5G38890.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 275.4 bits (703), Expect = 3.6e-74
Identity = 136/189 (71.96%), Postives = 160/189 (84.66%), Query Frame = 0


Query: 8   TTEFVTPGEVLGNFSDFKPGRGAYVANNTVYASLSGFRRIIPPPSDSSDLRSTVEVTGHK 67
           TT  VTPG+V+G  ++FK G+GAYV + T+YASL+G  RI+ P  +S D R+ VEVTGHK
Sbjct: 2   TTGLVTPGDVIGKATEFKAGKGAYVNDATIYASLTGTCRIVSPLPESIDQRAIVEVTGHK 61

Query: 68  AHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDKVDMH 127
           AHG +P  GS+VIARVTKVM+KMA+ DI+CVG K+V+E F G+IRQQDVRATEIDKVDMH
Sbjct: 62  AHGPIPETGSVVIARVTKVMTKMAAVDILCVGSKAVRENFAGVIRQQDVRATEIDKVDMH 121

Query: 128 LSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQCPLTGQI 187
            SF  GDIV+A+VLSLGDARAY+LSTAKNELGVVSAES AG  MVPISWTEMQCPL+GQ 
Sbjct: 122 QSFHAGDIVRAMVLSLGDARAYYLSTAKNELGVVSAESAAGETMVPISWTEMQCPLSGQT 181

Query: 188 QQRKVAKVG 197
           +QRKVAKVG
Sbjct: 182 EQRKVAKVG 190

The following BLAST results are available for this feature:

BLAST of Clc03G13010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879159.1	4.6e-100	96.45	exosome complex component CSL4 [Benincasa hispida]	[more]
XP_008465048.1	5.1e-99	95.94	PREDICTED: exosome complex component CSL4 [Cucumis melo]	[more]
XP_004144376.1	3.7e-97	94.92	exosome complex component CSL4 [Cucumis sativus] >KGN58353.1 hypothetical protei...	[more]
KAG7020862.1	4.1e-96	93.91	Exosome complex component CSL4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023530831.1	4.1e-96	93.91	exosome complex component CSL4 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc03G13010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y3B2	4.6e-34	45.16	Exosome complex component CSL4 OS=Homo sapiens OX=9606 GN=EXOSC1 PE=1 SV=1	[more]
Q9DAA6	3.0e-33	44.09	Exosome complex component CSL4 OS=Mus musculus OX=10090 GN=Exosc1 PE=1 SV=1	[more]
O59821	7.4e-24	38.59	Exosome complex component csl4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]
P53859	2.7e-18	35.26	Exosome complex component CSL4 OS=Saccharomyces cerevisiae (strain ATCC 204508 /...	[more]

BLAST of Clc03G13010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CMV8	2.5e-99	95.94	exosome complex component CSL4 OS=Cucumis melo OX=3656 GN=LOC103502755 PE=4 SV=1	[more]
A0A0A0L935	1.8e-97	94.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G627150 PE=4 SV=1	[more]
A0A6J1F6G8	9.8e-96	92.89	exosome complex component CSL4 OS=Cucurbita moschata OX=3662 GN=LOC111441251 PE=...	[more]
A0A6J1IH52	1.3e-95	93.40	exosome complex component CSL4 OS=Cucurbita maxima OX=3661 GN=LOC111472912 PE=4 ...	[more]
A0A6J1DE54	1.2e-93	91.41	exosome complex component CSL4 OS=Momordica charantia OX=3673 GN=LOC111019593 PE...	[more]

BLAST of Clc03G13010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38890.1	3.6e-74	71.96	Nucleic acid-binding, OB-fold-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.100		coord: 11..61 e-value: 5.8E-9 score: 37.3
None	No IPR available	GENE3D	2.40.50.140		coord: 66..196 e-value: 2.0E-53 score: 181.7
None	No IPR available	CDD	cd05791	S1_CSL4	coord: 72..161 e-value: 1.51155E-45 score: 143.926
None	No IPR available	SUPERFAMILY	110324	Ribosomal L27 protein-like	coord: 11..47
IPR019495	Exosome complex component CSL4, C-terminal	PFAM	PF10447	EXOSC1	coord: 102..143 e-value: 2.2E-11 score: 44.3
IPR025721	Exosome complex component, N-terminal domain	PFAM	PF14382	ECR1_N	coord: 11..47 e-value: 1.0E-12 score: 47.6
IPR039771	Exosome complex component Csl4	PANTHER	PTHR12686	3'-5' EXORIBONUCLEASE CSL4-RELATED	coord: 5..196
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 72..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G13010.1	Clc03G13010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0072488	ammonium transmembrane transport
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000176	nuclear exosome (RNase complex)
cellular_component	GO:0000178	exosome (RNase complex)
molecular_function	GO:0008519	ammonium transmembrane transporter activity
molecular_function	GO:0003723	RNA binding