Clc03G12680 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G12680
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	basic proline-rich protein-like
Location	ClcChr03: 20353175 .. 20354922 (-)
RNA-Seq Expression	Clc03G12680
Synteny	Clc03G12680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAGCATGGGAGAATTAACAAAGACAGCCGACATGGCCGAGGTATGTAGGTGATTAAATTTCATATACACATTATTTACATATCTATTCTAACACAATTCCATTGTTGTATAGGAACGAAAGGTGATGCATGACCGTCGGAAGAGGTCTAAGCCGACAAGGTTTTCACCGGAGGATGTGAATAGGCAGAAGAGGGACCAACATCCTCCAAACCCGTTCCCCCCTCACAACCTTCCCAAACTTCCGAACCTTCTCCTTCCACATCTCCTCAGCCAATTCCCCAACCCTCTGAACCCTCCAAACCTTCCAAACCACCACCTTCCAAACCTTCCAAACCTTCCAAACCACCACCTTCTAAACCTTCCAAACTTTCCAAACCACCACCTTCTAAACAAACTCCCCAAACCTCCTAGCCCCCACCTTCCCAATCTCCAACTTCTAAACCTCCACCTTCTAAACCTTCCCAAACCTCCGAACCTTCTCCTTCCACATCTCCTCAGCCAATTCCCCAACCCTCCGAACCCTCCAAACCTTCCAAACCTCCACATTCTAAACCTTCCAAACCTTCCAAACCTTCCAAACCTTCCCAACATCCACCTCCACCTCCACCTTCCAAACCTTCTCAAACTCCACCTTCCCAACCTCCACCTTCTCAACCTCCACCTCCACTTTCACCTCCACCTTCTCAACCTCAACCTTCTCAACCTTCTCCACCTCCACCTCCCCAACCTCCACCTTCTCAACCTCCACCTTCACCTTCCAAACCTCCACCTCCTCAACCTCCACCTTCTCAACCTCCACCTCCACCTCCACCTCCACCTTCCCAACCTTCACCTTCCCAAACTCCACCTTCTCAACCTCAACCTTCCCAACCTCCACCTCCACCTCCACCTCCCCAACCTATAGTCCCTGTCCCCAACTTCCCCATCAGATCGGTCCGAGTGTATGATCCCCTGTTCCCGATTCTAGATGTGCTCTGGTCTGCGTATAAGAAGTGGAAGAGCACTCCGAAGACGAAGGACGAGGTGAGGACAGTCACATACGCCTCAAGGACCAAAGAATTCTTCCGCACTCTTGAGAAGAATATATGGGTGCTTGGGAACGTAAGTATTTCTTTAACCCTCATCTTATCGTTTATATTTATCTAAGCGATCACACAGACTTGAACTAAACGATCGCTGATATAATCTATGCGATCGCTTATTATTAAACGATCGCATAGACTATATAAACGATCATTTAGACAACTCTAAGCGATCGTTTAGTTCAACATAAACGATCGTTTATGTTTAGTAAGTGATCGTTTATAAATTCAGTTGCTATTATTGCTAACCTATTACGTTTTTTCTGTTGTATATGGACATACTAGTGCTCCACGTTCACCGGAAGCTTCACTCCCGCCCCGATTTGTGTTCACATCGGTTTACGGTGGTGAACACTGCCGTTATGGTATGTACATTAGTATCTGATAGTTTGACTTATTGTTATTATCGTTTAATCTAACATTTGGTTTCCTACAGGATTCCCTCACGAATATTGAAGGAATCTCCACGAATATACGACCTGATGGTGTGGTGATGCATGATGGCACAATTGAGCCTTTGACCAACAAGGTTGCACACTCAGGCTTCTGGGCGATGCACCTGACGTTCATGGAGTTCGCACATGGTCTGAACGAAGAGTACAAGCCTGCGTGGTCGGAGGTTGATTACGTTTCCGGGCCGATCAACATAAATGAGCATTAG

mRNA sequence

ATGAGGAGCATGGGAGAATTAACAAAGACAGCCGACATGGCCGAGCCCCCACCTTCCCAATCTCCAACTTCTAAACCTCCACCTTCTAAACCTTCCCAAACCTCCGAACCTTCTCCTTCCACATCTCCTCAGCCAATTCCCCAACCCTCCGAACCCTCCAAACCTTCCAAACCTCCACATTCTAAACCTTCCAAACCTTCCAAACCTTCCAAACCTTCCCAACATCCACCTCCACCTCCACCTTCCAAACCTTCTCAAACTCCACCTTCCCAACCTCCACCTTCTCAACCTCCACCTCCACTTTCACCTCCACCTTCTCAACCTCAACCTTCTCAACCTTCTCCACCTCCACCTCCCCAACCTCCACCTTCTCAACCTCCACCTTCACCTTCCAAACCTCCACCTCCTCAACCTCCACCTTCTCAACCTCCACCTCCACCTCCACCTCCACCTTCCCAACCTTCACCTTCCCAAACTCCACCTTCTCAACCTCAACCTTCCCAACCTCCACCTCCACCTCCACCTCCCCAACCTATAGTCCCTGTCCCCAACTTCCCCATCAGATCGGTCCGAGTGTATGATCCCCTGTTCCCGATTCTAGATGTGCTCTGGTCTGCGTATAAGAAGTGGAAGAGCACTCCGAAGACGAAGGACGAGGTGAGGACAGTCACATACGCCTCAAGGACCAAAGAATTCTTCCGCACTCTTGAGAAGAATATATGGGTGCTTGGGAACACAACTCTAAGCGATCGTTTAGTTCAACATAAACGATCGTTTATGTTTATGCTCCACGTTCACCGGAAGCTTCACTCCCGCCCCGATTTGTGTTCACATCGGTTTACGGTGGTGAACACTGCCGTTATGGATTCCCTCACGAATATTGAAGGAATCTCCACGAATATACGACCTGATGGTGTGGTGATGCATGATGGCACAATTGAGCCTTTGACCAACAAGGTTGCACACTCAGGCTTCTGGGCGATGCACCTGACGTTCATGGAGTTCGCACATGGTCTGAACGAAGAGTACAAGCCTGCGTGGTCGGAGGTTGATTACGTTTCCGGGCCGATCAACATAAATGAGCATTAG

Coding sequence (CDS)

ATGAGGAGCATGGGAGAATTAACAAAGACAGCCGACATGGCCGAGCCCCCACCTTCCCAATCTCCAACTTCTAAACCTCCACCTTCTAAACCTTCCCAAACCTCCGAACCTTCTCCTTCCACATCTCCTCAGCCAATTCCCCAACCCTCCGAACCCTCCAAACCTTCCAAACCTCCACATTCTAAACCTTCCAAACCTTCCAAACCTTCCAAACCTTCCCAACATCCACCTCCACCTCCACCTTCCAAACCTTCTCAAACTCCACCTTCCCAACCTCCACCTTCTCAACCTCCACCTCCACTTTCACCTCCACCTTCTCAACCTCAACCTTCTCAACCTTCTCCACCTCCACCTCCCCAACCTCCACCTTCTCAACCTCCACCTTCACCTTCCAAACCTCCACCTCCTCAACCTCCACCTTCTCAACCTCCACCTCCACCTCCACCTCCACCTTCCCAACCTTCACCTTCCCAAACTCCACCTTCTCAACCTCAACCTTCCCAACCTCCACCTCCACCTCCACCTCCCCAACCTATAGTCCCTGTCCCCAACTTCCCCATCAGATCGGTCCGAGTGTATGATCCCCTGTTCCCGATTCTAGATGTGCTCTGGTCTGCGTATAAGAAGTGGAAGAGCACTCCGAAGACGAAGGACGAGGTGAGGACAGTCACATACGCCTCAAGGACCAAAGAATTCTTCCGCACTCTTGAGAAGAATATATGGGTGCTTGGGAACACAACTCTAAGCGATCGTTTAGTTCAACATAAACGATCGTTTATGTTTATGCTCCACGTTCACCGGAAGCTTCACTCCCGCCCCGATTTGTGTTCACATCGGTTTACGGTGGTGAACACTGCCGTTATGGATTCCCTCACGAATATTGAAGGAATCTCCACGAATATACGACCTGATGGTGTGGTGATGCATGATGGCACAATTGAGCCTTTGACCAACAAGGTTGCACACTCAGGCTTCTGGGCGATGCACCTGACGTTCATGGAGTTCGCACATGGTCTGAACGAAGAGTACAAGCCTGCGTGGTCGGAGGTTGATTACGTTTCCGGGCCGATCAACATAAATGAGCATTAG

Protein sequence

MRSMGELTKTADMAEPPPSQSPTSKPPPSKPSQTSEPSPSTSPQPIPQPSEPSKPSKPPHSKPSKPSKPSKPSQHPPPPPPSKPSQTPPSQPPPSQPPPPLSPPPSQPQPSQPSPPPPPQPPPSQPPPSPSKPPPPQPPPSQPPPPPPPPPSQPSPSQTPPSQPQPSQPPPPPPPPQPIVPVPNFPIRSVRVYDPLFPILDVLWSAYKKWKSTPKTKDEVRTVTYASRTKEFFRTLEKNIWVLGNTTLSDRLVQHKRSFMFMLHVHRKLHSRPDLCSHRFTVVNTAVMDSLTNIEGISTNIRPDGVVMHDGTIEPLTNKVAHSGFWAMHLTFMEFAHGLNEEYKPAWSEVDYVSGPININEH

Homology

[Close]

BLAST of Clc03G12680 vs. NCBI nr
Match: GIL96730.1 (hypothetical protein Vretimale_2520, partial [Volvox reticuliferus])

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-05
Identity = 104/173 (60.12%), Postives = 107/173 (61.85%), Query Frame = 0


Query: 16  PPPSQSPTSKPPPSKPSQTSEPSPSTSPQPIPQPSEPSKPSKPPHSKPSKPSKPSKPSQH 75
           PPPS  P S P PS P   S PSP + P P P P  PS P  PP   PS P  P  PS  
Sbjct: 229 PPPSPPPPSPPSPSPPPPPSPPSPPSPPSPSPPPPSPSPPPSPPPPSPSPPPSPPPPS-- 288

Query: 76  PPPPPPSKPSQTPPSQP-PPSQPPPPLSPPPSQPQPSQPSPPPPPQPPPSQPPPSPSKPP 135
            PPPPPS P  +PP  P PPS  PPP SPPPS P P  PSPPPPP PPP  PPP PS PP
Sbjct: 289 -PPPPPSPPPPSPPPPPSPPSPSPPPPSPPPS-PSPPPPSPPPPPSPPPPSPPPPPSPPP 348

Query: 136 P-PQPPPSQPPPPPPPPPSQPSPSQTPPSQPQPSQPPPPPPPPQPIVPVPNFP 187
           P P PPPS PPP PPPPPS PSPS  PPS P P  PPPP PPP P  P P+ P
Sbjct: 349 PSPPPPPSPPPPSPPPPPSPPSPSPPPPSPPSPPSPPPPSPPPPPSPPPPSPP 397

[Close]

BLAST of Clc03G12680 vs. NCBI nr
Match: YP_002296212.1 (putative membrane protein [Emiliania huxleyi virus 86])

HSP 1 Score: 59.7 bits (143), Expect = 6.0e-05
Identity = 103/175 (58.86%), Postives = 105/175 (60.00%), Query Frame = 0


Query: 16  PPPSQSPTSKPPPSKPSQTSEPSPSTSPQPIPQPSEPSKPSKPPHSKPSKPS--KPSKPS 75
           PPPS  P S PPPS P  +  P P + P P P P  PS P  PP   P  PS   PS P 
Sbjct: 324 PPPSPPPPSPPPPSPPPPS--PPPPSPPPPSPPPPPPSPPPSPPPPSPPPPSPPPPSPPP 383

Query: 76  QHPPPPPPSKPSQTPPSQPPPSQPPPPLSPPPSQPQPSQPSPPPPPQPPPSQPPPS--PS 135
             PPPP P  PS  PPS PPP  PPPP  PPPS P PS PSPPPP  PPPS PPPS  P 
Sbjct: 384 PSPPPPSPPPPSPPPPSPPPPPSPPPPSPPPPSPPPPSPPSPPPPSPPPPSPPPPSPPPP 443

Query: 136 KPPPPQPPPSQPPPPPPPPPSQPSPSQTPPSQPQPSQPPPPPPPPQPIVPVPNFP 187
            PPPP PPP  PPPP PPPPS P PS  PPS P PS PPP PPPP P  P P  P
Sbjct: 444 SPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPP 496

[Close]

BLAST of Clc03G12680 vs. NCBI nr
Match: YP_293958.1 (hypothetical protein EhV204 [Emiliania huxleyi virus 86] >CAI65627.1 putative membrane protein [Emiliania huxleyi virus 86])

HSP 1 Score: 59.7 bits (143), Expect = 6.0e-05
Identity = 103/175 (58.86%), Postives = 105/175 (60.00%), Query Frame = 0


Query: 16  PPPSQSPTSKPPPSKPSQTSEPSPSTSPQPIPQPSEPSKPSKPPHSKPSKPS--KPSKPS 75
           PPPS  P S PPPS P  +  P P + P P P P  PS P  PP   P  PS   PS P 
Sbjct: 340 PPPSPPPPSPPPPSPPPPS--PPPPSPPPPSPPPPPPSPPPSPPPPSPPPPSPPPPSPPP 399

Query: 76  QHPPPPPPSKPSQTPPSQPPPSQPPPPLSPPPSQPQPSQPSPPPPPQPPPSQPPPS--PS 135
             PPPP P  PS  PPS PPP  PPPP  PPPS P PS PSPPPP  PPPS PPPS  P 
Sbjct: 400 PSPPPPSPPPPSPPPPSPPPPPSPPPPSPPPPSPPPPSPPSPPPPSPPPPSPPPPSPPPP 459

Query: 136 KPPPPQPPPSQPPPPPPPPPSQPSPSQTPPSQPQPSQPPPPPPPPQPIVPVPNFP 187
            PPPP PPP  PPPP PPPPS P PS  PPS P PS PPP PPPP P  P P  P
Sbjct: 460 SPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPP 512

[Close]

BLAST of Clc03G12680 vs. NCBI nr
Match: KAG0561446.1 (hypothetical protein KC19_9G065200 [Ceratodon purpureus])

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-04
Identity = 105/175 (60.00%), Postives = 107/175 (61.14%), Query Frame = 0


Query: 16  PPPSQSPTSKPPPSKPSQTSEPSPSTSPQPIPQPSEPSKPSKPPHS--KPSKPSKPSKPS 75
           PPPS  P S PPPS P  +  P P + P P P P  P  PS PP S   PS P  PS P 
Sbjct: 539 PPPSPPPPSPPPPSPPPPSPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPPSPPP 598

Query: 76  QHPPPPPPSKPSQTPPSQPPPSQPPPPLSPPPSQPQPS--QPSPPPPPQPPPSQPPPSPS 135
             PPPP P  PS  PPS PPPS PPP   PPPS P PS   PSPPPP  PPPS PPPSPS
Sbjct: 599 PSPPPPSPPPPSPPPPSPPPPSPPPPSSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPS 658

Query: 136 KPPPPQPPPSQPPPPPPPPPSQPSPSQTPPSQPQPSQPPPPPPPPQPIVPVPNFP 187
            PPPP PPP  PPPPP PPP  PSPS  PPS P PS PPP PPPP P  P P  P
Sbjct: 659 -PPPPSPPPPSPPPPPSPPP--PSPSPPPPSPPPPSPPPPSPPPPSPPPPPPPMP 710

[Close]

BLAST of Clc03G12680 vs. NCBI nr
Match: XP_042804536.1 (LOW QUALITY PROTEIN: basic proline-rich protein-like [Panthera leo])

HSP 1 Score: 57.0 bits (136), Expect = 3.9e-04
Identity = 97/171 (56.73%), Postives = 97/171 (56.73%), Query Frame = 0


Query: 16  PPPSQSPTSKPPPSKPSQTSEPSPSTSPQPIPQPSEPSKPSKPPHSKPSKPSKPSKPSQH 75
           PPP  SP   PPP  P     P PS  P P P P  PS P  PP   P  P  P  P   
Sbjct: 151 PPPPPSPPPLPPPPPPPPPPPPPPSPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPP 210

Query: 76  PPPPPPSKPSQTPPSQPPPSQPPPPLSPPPSQPQPSQPSPPPPPQPPPSQPPPSPSKPPP 135
           PPPPPPS P   PP  PPPS PPPP  PPP  P P  P PPPPP PPPS PPP P  PPP
Sbjct: 211 PPPPPPSPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPP 270

Query: 136 PQPPPSQPPPPPPPPPSQPSPSQTPPSQPQPSQPPPPPPPPQPIVPVPNFP 187
           P PPP  PPPPPPPPP  P P   PP  P PS PPPPPPPP P  P P  P
Sbjct: 271 PSPPP-PPPPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPSPPPPPP 320

[Close]

BLAST of Clc03G12680 vs. ExPASy TrEMBL
Match: Q4A2S9 (Putative membrane protein OS=Emiliania huxleyi virus 86 (isolate United Kingdom/English Channel/1999) OX=654925 GN=EhV204 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.9e-05
Identity = 103/175 (58.86%), Postives = 105/175 (60.00%), Query Frame = 0


Query: 16  PPPSQSPTSKPPPSKPSQTSEPSPSTSPQPIPQPSEPSKPSKPPHSKPSKPS--KPSKPS 75
           PPPS  P S PPPS P  +  P P + P P P P  PS P  PP   P  PS   PS P 
Sbjct: 340 PPPSPPPPSPPPPSPPPPS--PPPPSPPPPSPPPPPPSPPPSPPPPSPPPPSPPPPSPPP 399

Query: 76  QHPPPPPPSKPSQTPPSQPPPSQPPPPLSPPPSQPQPSQPSPPPPPQPPPSQPPPS--PS 135
             PPPP P  PS  PPS PPP  PPPP  PPPS P PS PSPPPP  PPPS PPPS  P 
Sbjct: 400 PSPPPPSPPPPSPPPPSPPPPPSPPPPSPPPPSPPPPSPPSPPPPSPPPPSPPPPSPPPP 459

Query: 136 KPPPPQPPPSQPPPPPPPPPSQPSPSQTPPSQPQPSQPPPPPPPPQPIVPVPNFP 187
            PPPP PPP  PPPP PPPPS P PS  PPS P PS PPP PPPP P  P P  P
Sbjct: 460 SPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPP 512

[Close]

BLAST of Clc03G12680 vs. ExPASy TrEMBL
Match: Q3HTK6 (Pherophorin-C1 protein OS=Chlamydomonas reinhardtii OX=3055 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-04
Identity = 101/175 (57.71%), Postives = 104/175 (59.43%), Query Frame = 0


Query: 16  PPPSQSPTSKPPPSKPSQTSEPSPSTSPQPIPQPSEPSKPSKPPHS--KPSKPSKPSKPS 75
           PPPS  P S PPPS P  +  P P + P P P P  P  PS PP S   P  PS P  P 
Sbjct: 216 PPPSPPPPSPPPPSPPPPS--PPPPSPPPPSPPPPSPPPPSPPPPSPPPPPPPSPPPPPP 275

Query: 76  QHPPPPPPSKPSQTPPSQPPPSQPPPPLSPPPSQPQPSQPSPPPPPQPPPSQPPPSPSKP 135
             PPPPPP +P   PP  PPP  PPPP  PPPS P PS P PPPP  PPPS PPPSP  P
Sbjct: 276 PSPPPPPPPRPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPPPPRPPPPSPPPPSPPPP 335

Query: 136 PPPQPPPSQPPPPPPPPPSQPSPSQTPPSQPQPSQPPPPPPPPQPIVPVPNFPIR 189
           PPP PPP  P PPPPPPP  P PS  PPS P PS PPP PPPP P  P P  P R
Sbjct: 336 PPPSPPP-PPSPPPPPPPRPPPPSPPPPSPPPPSPPPPSPPPPPPPSPPPPPPPR 387

[Close]

BLAST of Clc03G12680 vs. ExPASy TrEMBL
Match: Q3HTK5 (Pherophorin-C2 protein OS=Chlamydomonas reinhardtii OX=3055 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.2e-04
Identity = 103/177 (58.19%), Postives = 103/177 (58.19%), Query Frame = 0


Query: 16  PPPSQSPTSKPPPSKPSQTSEPSPSTSPQPIPQPSEPS--KPSKPPHSKPSKPSKPSKPS 75
           PPPS  P S PPP  PS    P PS  P P P P  PS   PS PP S P     P  P 
Sbjct: 321 PPPSPPPPSPPPPPPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPPPP 380

Query: 76  QHPPPPPPSKPSQTPPSQPPPS----QPPPPLSPPPSQPQPSQPSPPPPPQPPPSQPPPS 135
             PPPPPPS P   PPS PPPS     PPPP  PPPS P PS P P PPP PPPS PPP 
Sbjct: 381 SPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPPPPSPPPPP 440

Query: 136 PSKPPPPQPPPSQPPPPPPPPPSQPSPSQTPPSQPQPSQPPPPPPPPQPIVPVPNFP 187
           P  PPPP PPPS PPPPPP PP  P PS  PPS P PS PPP PPPP P  P P  P
Sbjct: 441 PPSPPPP-PPPSPPPPPPPSPPPPPPPSPPPPSPPPPSPPPPSPPPPSPPPPPPPSP 496

[Close]

BLAST of Clc03G12680 vs. ExPASy TrEMBL
Match: R1EW01 (Uncharacterized protein OS=Emiliania huxleyi OX=2903 GN=EMIHUDRAFT_314476 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.2e-04
Identity = 102/176 (57.95%), Postives = 104/176 (59.09%), Query Frame = 0


Query: 16  PPPSQSPTSKPPPSKPSQTSEPS--PSTSPQPIPQPSEPSKPSKPPHSKPSKPSKPSKPS 75
           PPPS  P S PPPS P     PS  P + P P P P  P  PS PP S P  P  PS P 
Sbjct: 16  PPPSPPPPSPPPPSPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPSPPPPSPPP 75

Query: 76  QHPPP--PPPSKPSQTPPSQPPPSQPPPPLSPPPSQPQPS--QPSPPPPPQPPPSQPPPS 135
             PPP  PPP  P  +PP  PPP  PPPP  PPPS P PS   PSPPPP  PPPS PPPS
Sbjct: 76  PSPPPPSPPPPSPPPSPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPS 135

Query: 136 --PSKPPPPQPPPSQPPPPPPPPPSQPSPSQTPPSQPQPSQPPPPPPPPQPIVPVP 184
             P  PPPP PPP  PPPP PPPPS P PS  PPS P PS PPP PPPP P  P P
Sbjct: 136 PPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSP 191

[Close]

BLAST of Clc03G12680 vs. ExPASy TrEMBL
Match: A0A6J3QDR3 (basic proline-rich protein-like OS=Tursiops truncatus OX=9739 GN=LOC117309017 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.2e-04
Identity = 91/171 (53.22%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 16  PPPSQSPTSKPPPSKPSQTSEPSPSTSPQPIPQPSEPSKPSKPPHSKPSKPSKPSKPSQH 75
           PPP   P   PPP  P     P P   P P P P  P  P  PPH  P  P  P  P  H
Sbjct: 57  PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPHPPPPPPPPPPPHPPPPPPPPPPPPPPH 116

Query: 76  PPPPPPSKPSQTPPSQPPPSQPPPPLSPPPSQPQPSQPSPPPPPQPPPSQPPPSPSKPPP 135
           PPPPPP  P   PP  PPP+ PPPP  PPP  P P  P PPPPP PPP  PPP P  PPP
Sbjct: 117 PPPPPPPPPPPPPPPPPPPTPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP 176

Query: 136 PQPPPSQPPPPPPPPPSQPSPSQTPPSQPQPSQPPPPPPPPQPIVPVPNFP 187
           P PPP  PP PPPPPP  P P   PP  P P  PPPPPPPP P  P P  P
Sbjct: 177 PPPPPPPPPTPPPPPPPPPPPPPPPPPPPPPPHPPPPPPPPPPPPPPPPHP 227

The following BLAST results are available for this feature:

BLAST of Clc03G12680 vs. NCBI nr


Match Name	E-value	Identity	Description
GIL96730.1	2.7e-05	60.12	hypothetical protein Vretimale_2520, partial [Volvox reticuliferus]	[more]
YP_002296212.1	6.0e-05	58.86	putative membrane protein [Emiliania huxleyi virus 86]	[more]
YP_293958.1	6.0e-05	58.86	hypothetical protein EhV204 [Emiliania huxleyi virus 86] >CAI65627.1 putative me...	[more]
KAG0561446.1	1.0e-04	60.00	hypothetical protein KC19_9G065200 [Ceratodon purpureus]	[more]
XP_042804536.1	3.9e-04	56.73	LOW QUALITY PROTEIN: basic proline-rich protein-like [Panthera leo]	[more]

BLAST of Clc03G12680 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc03G12680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q4A2S9	2.9e-05	58.86	Putative membrane protein OS=Emiliania huxleyi virus 86 (isolate United Kingdom/...	[more]
Q3HTK6	2.5e-04	57.71	Pherophorin-C1 protein OS=Chlamydomonas reinhardtii OX=3055 PE=2 SV=1	[more]
Q3HTK5	3.2e-04	58.19	Pherophorin-C2 protein OS=Chlamydomonas reinhardtii OX=3055 PE=2 SV=1	[more]
R1EW01	4.2e-04	57.95	Uncharacterized protein OS=Emiliania huxleyi OX=2903 GN=EMIHUDRAFT_314476 PE=4 S...	[more]
A0A6J3QDR3	7.2e-04	53.22	basic proline-rich protein-like OS=Tursiops truncatus OX=9739 GN=LOC117309017 PE...	[more]

BLAST of Clc03G12680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 15..27 score: 46.15 coord: 27..48 score: 31.82 coord: 68..85 score: 40.0 coord: 51..67 score: 30.59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..180
None	No IPR available	PANTHER	PTHR13037:SF21	PROTEIN CAPPUCCINO	coord: 15..183
None	No IPR available	PANTHER	PTHR13037	FORMIN	coord: 15..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G12680.1	Clc03G12680.1	mRNA