Clc03G11820 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G11820
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	ycf20-like protein
Location	ClcChr03: 17771987 .. 17789521 (+)
RNA-Seq Expression	Clc03G11820
Synteny	Clc03G11820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCGGGTAGTTTGCGCAAACAAGTCTCATCTGCCAGACCCTTCTATTTATAGACTTCATAGAAAATTGCAAACAGATTCTTGGCTTGCCACCTTCCACTTGCATGCAAGCCCATACCACACGTAACCCAGTTTTGACACCTAATTTGACTTATTTAGTACTTAAGTCTCAAATTTTCTTAAGCAAGAAGGAATGGTGGACATAACCTTGGGTAAAAGTTTTCCACGAATAGTTGAGTTTTGTTTTGAGGTTAGTTAGCTACTCTTCTTGGCTACCCATTGCATGCAACCCCTTGGCTGATGGTCGCCGACTTGGACATATAGCCACCATGCGTCAACCACACAAGCCCTCGTTGGACGCATAGTTCTCAACGCATCACTCCCTCTCCTATTAACTTCAACTAACGCATCCAAGCTCATGGACGCCTAGTTCATCTTGCCCATTAAGCAACGCATCATACACACACTTGGTGGCTCGGCTACTCAAGGGTCTCGCATGCTCCACACTTGGCAAAATTTCCTCCCTTCCTTCTTCCTCAATGCCAACCACACTTACAAAACTCCACCCGACTACATCATGTCAAGGCTCTCGGCTACCTTCATCTCAACTACCCACCTAGTCACTTACTTACCATCCTTCCCACGGCTAAGTCCACAACAAAAATGCTAAGTACTTGAGAATGAAAGTAGGGTTTACATTTCTCATCTATGACAACACCGTTTACCTCTACTACATTGAAGTGGACCATCATATCCAAAATCTATTCTCTAACAGAGATTCCTTCCTTCATGCGAGAGTTGTAAACGTATTTGAGAGCATCGTGCCTGATCGATGAGGACAGTTGTCCAAACATCGTTTGCAACGAATCTGTGATCTCTTTAGTGGTGACCATGCCCTTGTGTTTCTTAGTCAGAACATCAGATATGCTTGCTAAGATATAGACTTTGGTCTTATCATTGGCCCTAGTCCATCTGCTATAGGCATCTCGAGTAGTTCGATTTGTTGACGAGTCAGGATTTGAAGTACATACCTCCGATAAGACGAAGCTTAAATCATCAATCACTAGTATTACGTTTATATTCGATTTCCATGTTGTGTAGTTATCTCCGTTTAGTTTTTCATAAGCAAGTAATTGTATGAAGGAGCTAGACATGCTGAAAATATAAACAAGTTCTATTAGTGAAATGTTACTGACCTTTAATCCAATTAGGTTTAGCAAAAGTAATAATGTACCCAAAAGAAAAAACTCATTATTAATTTGCAACGATACTTTAGTGAGTCAGAATAACTACTACCGAGGAGCAGTTAATTGTTCCTTCATTGAATCAATACGTTCTTGATTAAATACTAGTACCAGAATAACTCTTATTCCTATAGCATTTAGTTATCATTACTTTGGTCAAGAATTTACTACCATTTAGTATTTCTCGTAAGTGTAACATTCCATTTTTAAATCTAAAGATCAGTCTCAACATGCTACCGCATGGAAAGACAATATTGAGAACGAACCTAAAAAGACCCTTTCTATTTCTGAAGTTTGCATTGTCCGGATCCTCATGTTACGACCCTTTGAATGGATAGTCACTCCAAGATGACATGTAGGCAAAACATGGAAATCTTATGGTGCAACCTAATGGAGGAGACCATAGGATGTTTTGACTCACTTCCTACTCCCACTTACTATGAACAACTTCCCTTAGGCCGCTCCCAAGGTGACACAAAACCAAGCATGAATCTCACGGTGTGAATTCTTAGGGACGTGAGAGCTAAATGTATCATATATATTATATTTCTCCCACTGAAGTGTTCTTGAAAGGTTTGGGTATACTTTTACATAACTATATTCTGGTTCATAAAATATAACCTAAGTCTAGACATTTTAACCTAGTATGACATTTATACTAGATTTAACTTATGATGTCTAAGTGATAAACTCTTTAAAACCTTACATTGCTCACGCAAGCTTATAAAACTAGGTTAACCTTAACTCAAGAAACGGCCCAATCCCCAAGTAGCAGGTGTTTCGTAAACCGTCAACTTAAATACTTCCAGCCTTAGACAGGACCTTGCCAAGTGAGTTTTCTTGTAACCTTGGTTTTATAAGTTAGCAACCTATTTTAGGTTTGTTAACCCTAAGTGAGCATGCAATTTATCTTTGTTATAGATTTTCAATGTCTAATTCATTTTATAACACTTAGAATAATAATTTATAACATACATATATATATTTCATAAAATAACATAATTGCTTTTATTAATTTTATGAAACCCTAAACATGCATACTATATATTATAATACTTTATAATATTCTTTTAATGCATGAAACATGATAATCCTATGGTGGAATTTTAAATCTATATGACATACTTTATGTACAAACAAATTCAATTTAATTAAAACATACATTCATAATGCATAAATAATTAAACACATTAAAGTGAACCAGTTTTGGCATCTAAAGCAATAAAACAACTAAATTATTACAATAATAATTGAAAAACAAGCTTGAATTGCTCCTGAACCCTTTGAATCGACCCGAACTAAGTAAAAAATGAGGGGAATTGAATCCCGACCGAAGTGTGTGATTGCGTTCTTTGATTTATTGAAAGAATTTAAAACACAAAAAATAAAGAAAAGGTTAAGCATCATACCTTTGTCAATCTATAATGCTCGAATCGATAGTCTTCTCCTTGTAGTCTTCGTTTTGTAAGAGATCTTCCTCGCTATGACTCTGACAAGGATCCGGTTTGTGAGAACCGCTTCTTTGAAAGAATGCGAAGAATAATTTTCTTAGAATTTTTCTAAGAAATATGAGAGAATTAGTAGAGGAAGATTTTTAGAGTAATTGTAGAGATTAATCTCTTAGAGAGTGTGTTTTATGAAGGCTCCCAATGACCCTATTAGGATAAACCCTCTGTAGAGATTTTAAATCAAATATTTAATAATATCCAATATTAATAAATATCTACCCAAATAATATTTTAAAATATTTAGATCTTATTTAAATATTTATTTTCTGCATAATTTTTTATTTGAATCTCATCCAAATTAAATAATTAATTATTTGAATCAAATTCAAATCAATTAATTAATTCTTCCTCTATTTATTTTCTGTAGAATCTTTAATTTGGATCTCATCCAAATTAAATAATTAATTATTTAAATCATATTCAAATAAATTAATTCTTTATATTATAAAGTTATAATTTGAATCACATTCAAATAAAATTTATAATAAATCATGCAATTAATTGTATCCAATACTATTAATATTTTCTCTCATAAATTTGAACATTGCAAATTTTTCTTTCAACATAGTTGATCCTTGTTGGTCCGTAGTGAGCTAGTAAGGGGATCTTATGGACATACAGGTCAGAAGCTCTAACAATATGAGATTAATCGGCTAAACTCATTAACCACATTAATCAATATTTGTTAAATGTGGGTACACTCCACTAAAGACCCACAGTTGCACTCTTCTCACTGCAGATATATTTCTGTGTCCATGGATATAGACCAATAATAGCAAATTAGTCATTCACAAGTGTTCGTAACACCAGTTGGGTCAAATTACTGTTTTACCCCTAGATTACTTCTAAATCCTTAAGTACTAGTGCTCCTCTAATGAACAACCTGTTTATGGTCCAACTATTAAACAGAAACCCCTTTCTGGCCAGTGAGAGGGTAGGACCCTTTGTTCAAGTCCCGGAGACACCACTTAAGGGAACACTTATCTACTTACCTTAAAAATGGGAATGAGTGAATTTCATCTTGTATAATTATGTCCCCAACTCCCCACTCGGTCTTGTCTCCAAGATGGTAGGCATATTGAGTCGGAAAACGGTCACTCTCACCCATATAAATCAAAGGACAATTCCCAATGGATAGAAGTTCATAATATATTCAGGATTAAGACTAAGTTGCTTAGGTCATCCTATTGAAATAGAAACCTAACTAGTTAACGAAGTTACATCTAGTGATTACTATTTCGTGGTTCGGTCTTATGCAAACTCATTACATAGGATACCTCCACTCACATGTCACCTACACGAACGCGTTAGATCATTGCATTTGTATCAAATATAAAGTGGGTCATATCCATAGTGTCACTAGGATAAGGTACCTAGCCTTATTCCTATACTATAGAACCTTTAGATTGTATCTTGAACATTGATCTCCATATGTCCCCACATACAGTTCAAGACTCATAAAACAACCTAGGATGTTAGTTTATCGGATTTAGGGTTATTAAGACAAAACAAACAAAAACAATCAATAACGCAAAAACTAAGGCTGAACCAGCTGGAAAAAACTTGAACTAGATCAAACCGATCCAATTGGACTGTTCTTCCTTGCGAGCATATTTCTAGGAAAAAAAATGAAGAGCGTCGCCATGCTCGGCCTCAGAATGATGATCCCTGTTTTCATTCTAGCTGGTTCTCTTCTCCAATTTATTCAAATTACAACCTAATTTCAACTCTAATTACTCCAACAAATTTACAAACCCTTCTTCACACATTAAAGCCCATAAACAAGCGGGCAATTACAATAGTTACAACCAATCAAAGCTTAAAATAGATGCCAAAACCATAATAAATCCAACTTTAGCAACCAAACCATTCATCTCATGAATTAACACTCACCAAGCTTAAATTAATGCAAATTGAGTGCTCAAAACATGCTCAAATACCAATTGAAAGAGTAAGGATCATGTAAGCAGAAGCAATTTGGATCTAAAACACTCTAATTACATCAATTTTAAGGATTAAACATGCTTGCTCAAGAACTAAAAGAAGAGTTTAAGAAATTTACATTGTTGTAGCTCAAAATTGAAAAAATCCTTTGATTGTTTTTTATCACGAACACTTCGTGGACCACCACTAGAGTCTTCACAGCGATTCTCTAACCTTAGAACGGATTGTGGGATCCAAATTGTGATGAATTTAAAGCAAATATGAAACTTTTTGGAGAATTTGGAATTCTTGGTTTTTGAAGTAAAATTGGCTTAAAATTTTTCGTTTTTTCCAACCAATCTTTTACTAAAAATAAACTCCATATATAGAGGAGTTCATGCAATTCAAATTAATCACATAAAGACACCAAGTAGGTGATTAATTTAGTGGGAAATGATGTGTTTATAAGAGGTTCAACCACCTCCTAAAATTCATGCATTTTTTAATTTCTATAATTCAAATATTAAAATGAATTTTCCTTTTTTTAATTTTAAATATAGTTAATTCTAAATAATTAATTAAACATTTTAATTAAATATATTAATTTAATATTAAATATTAAATTATTAAATAAATTAATTAAAATATTTAATTTTAATAATAATTAATTAAATATTAAATTAATAATTTTTTCACTAATCCCGACTTTTCTTAATCCAATGAATCTCTATTCATGTGATAAATATTTAAATCATATTTAAATATTTTCAACTTTCCTTTATCGTTCAATTTCATAATTAAACGATCATACGTTTAAACAAATCGTATATATTACTTACTCCCTAAACTGAATTCGAATGATTCAAATTCTCTCATCACACAGTTCTAAGGTTTACCTCGATATGAGCTAGTTAGGGGACCTAATGGACCTATAGATCATTAGCTCCAACGATTCAAAATTATTTGGCTAAACTCTTTAACCTAGTTAATCAACATTCATTAACTACTAAGACATTCCACTATAGTTTAGTAGTTGCACTCTTCTCATTGTAGATATATTTATGTCCACTTGATATAACCATAATTAGTAAGCCGATCTTTCACAAGTAGTTCATAATGGTAGGCTTATTTAGTCGGCGAACTTGGGCCACAACAAGCTCATGTTAAAAGGAATATGTCCATGATCCTATTCATATGCTTAAGGTGCAACCAATGGAGCTAAGAGATGGGTTAAGTTATGAGAAGGAATTGATTCAAATGTTCATTTGATGAAAAAGAGTAAGTATTAAGATGTTGAATTCGTTGGCCTAGGATTTGTGAAATCATGATGAAGAGGAAGCTATTTGGGAAGTTAAGCCTAAGGAACAAATGATAAAAACAGTATTCACAATTGTTCTTGAGAGACTAACGACCTACAGGAATTCGAGACGGAATACTTATAAGAAAGGGGTGAATTGAAAAGCTCTACTTTTAGCTTATAAAATGGTAAGCAAGTAGTCGAGTAATGGAAGAGATGGTTGAAAGCTCGAGTTCAAGAGTCCATGCGTTGGTGAAATGAAGTAAGTAATTAAGGAGAGTGAGCATGAGTAAAGATTGACATCAGAAAGAAATTGCGTAGCTAAGTTTAAGCGTAAAAATGCAGTGTTGGCTGGTTGAAGCAAGTGTAAATGTTTGAGGTTATGCGTTGATGAGATTGTGGAACCAACAGACATGCATTGGTTGAAATCGGTAAAAGTATGCTTTGAAGATTAAAAGATTTACACTTGAAATCTGTAATCCTGTAATGATTATAAGTAAAGGAACTAAACTACTAAATTTGGAAGTGTGATCTGCAGAAAAGGAAATTCACCAACGGATTAGAGAAAGAGAAAATTTGATAAGTACTTGGCGTTGAGAAAAATCAAAACGCATAGGCATGCTAAAGAGATGTATAAGAATACATGAAAGAAAGGAATGGTTAAGTAAATAAAGTATTGAAGGGAAAACTATAACCCTAAAGTAATCAGAAAAGAAGGTAAAGCAGGAGCATTGATTATCAGAGTAGCGTAGCGGAAGCGTGGTGAAGTCATAACCTGCAGAAAACGCATAGTATTGTTTAAGTTGAAAGTAAGGTGTAGATAAAAGTTCTATATGTTTGTGAAGGCTTATATGCGTTGACACAACAAGAAATTAAGCGGACTTAAGTATAAAAGAGAGTGAGTCGACTGGGAAGGTATGTGTTTTCGATGGAAAGTGTGAGTAAAAGTTTAAAACTTTGTGAGGTTTTTGAATAAGAAGCTATGCGCTGGTAGTGATTGAGGAAGTTGCGTTGAACTAAACTATGCGATTGAAATGTGTTGTAGTAAACGCAGGATGCGACGCGTTCAAGTTAGCAACTGAACTATGCGCTCAGGTTTGAAATCAAGAACGCGTTGGCGGGCGTAGTTCAAGTAAAACGTGAAGAATAGGCGCATAGTATTGAAATTACAAATAGATGGAAATTACAGTAGTTCTTGGGAAAAGTGTTTCTCATAAAATTATTTGAGGAATTGGACCGGTTTTAATTGGGATTATCGCAAACAAATGTCTAGTTTGAGGAAAAAGAGCATTCAGGAGAATGTTTTAATAAAGACGATATATTTTTTTTTTCATATGGGGACGAAATCCTTGTAAGGAGGTGGTAATTGTAAGCCCCGTACTTGACCTTATGAGAAGGCAAGTTAAGAAGAGACTAAGAGATGGGCGTTTAGTAGGAAAAGTTGGCCGAGTTGTATGGGGGCAAAAATGGCTAAGTATTGGCCATGCGTTGGTGGCACTACGCGTTGATGAAAGTAGTTTGACGTGGACGCGGAGGTGAAGGAAGGCTATTAGGCGTTGAAGGCCACGAGGCGTTGAGGGTCACGAAGCGTTGAAGGCCACTCTGCGCCGAAGGTCACTATGCGTTAAACGCTACCCTGTGGCTCAAGTATTAAGAAGAGGAAAAGAATGAATAAAAAGTATTATATCGCCTAAATTTCGAGGACGAAATTTTTCTAAGGTGAGTGGAATTATCACACCCTACTTTTTTTAAGAAACTTATGCGTTGAAGAGTCTATGAAGGAAAGAGGTAAAAGACCATGTTGGACGCATGGTCAGGGCTAGGTAACGCACGGTAAAGGTGGACGCATGAAAGTAAACCGAGAAGGGAAAGAAGTGAAGCGAATAAGCAAGAAAGGAATAAAGTTAGGTTGTGAAGTGTTGAAGAGATTTAAGTCTCAGAAAGATAGAATGCAATAGCAAATTGAGTAACGCATAGACTTATAGCAAGGAATGTTCACAAGTGTTGAAGAAGGTTGTGAAGTAAACATAAAATCTGGTGCATGTGGCGGACGCATGCTGATCTATCCTTGAGAGAAGTAGTTTAAGTGCAAGGAAAAGGTTAAAAGAATAACCTTGGGAGTAATCAAGGAATGATCAAGGATAGGAAGATGGTCATTGAACGCAGGATGAAGGTGCATGCATCAGGATCAACGCATAGAGGAAAAACTTGAGAAGGAGTTGTTGTTATGGACATAAGGAAGGAGTTGGACGCATGGTATGATGCGATGAGGTACAAACGCATAGTATTGCGCGTTTGTCATTAACGCCTAGTGGATTGTGTAAGCATTGATTTATAACAGTGCGGCTATGCGTTGAAGGTGATCTCGAATGGTTGTTGTGAGCTGAAGTGGTCGCCGCGTTGGCAGGGGAAGATACGTACTTAGCTTACCATGCGTCGGTAAGGTTGTCATGCGTTGAGATCTCTATGCGTTAAAGACAGAATTATCTCTATGCGTTAAAGACAGAGTTATCTCTATGCGTCAAAGAGTAGTATAGTTGGCTGAGAGTTAGAAAAGTGAGTAGTGAAGCTCAAACTTTAAAGGAAATTCAACAAACGCATGAGGGCGTTGTGTTGAATGAATGGTTATCTATTGGAAAATGTTGGACGCATAAGATAAGCTTATAAAGGCCAGGTGGCTTTGTGTAGATTTGACACCTTATCAGTAGGAGGTGTTAAAGGTATGTTAAGTGTTTCATGCAAAGTGACACTTGGACTAATGCATGGTTAATTAAGCATGCAGCGTGACATATGGCAAACAAGTGGCATAAGGAGATGAAAAGATGGATGGCAAGCTCCCTATAAATAGAACTTTGAGGGAAAATGAGCGACTGATGACTCTAAAAGAAGAAATCTGGAGAGAAAAAGAGAAGAAGAAGGCAGCAAGGACGTCCGTAGTAGGTGTATGCGGCCAAGAAAGAAGGTATTTGACAACTTAGTTATTTTATGTAAAGAAGTTGTCTGATGTTAAAAAGGGTCGGCTTTGCGTTGAGGACAAACATAATGTCCAAGGTGAACGCAGCGTCCAAAGTTAGATGATGCATTCATGATGGACCTTGCGTCCAAGAGAGGGTGATGCATCCGAAAGAGAAATAAGAAGAGTCGGGATGCACTTTGCGGAAGTAATCAGCCTTGCGTTACCAACCTTGCGTTGAAGGCTAGGGTTTCGTTCAACCGAGCTGACAGAGGAAAATGGAGCCTTGCGTTCCAGAGTTAGAACGCTGCGTCCAGAAAGCTCGGGAAGAGGAAATAGAGGAAAGGAAGAAGAAGTATTCTTTGGCAAATACAGGTGAGTAACACCTGCGTTTTATAAAAATAAATGAGTTCTTTATGAATGTAGTTCTACGAGTTTTGAATAAAATAATGCATGCGTTTTCATATATGTAAAGCATACGAATATGTGATTATAGAGACATGAGCATGCGTTTAGAGACATGAGTATGCATTTCACTTGTAAACTTTGAGAATGCTGGATACTTGTTATGAGTTATAAAACGCATGGTGATTTATGTTATTGGTTCTCATGACTTTTCTGAGAAACATGATATTATATGATTTCAAGAAAAATTTGAAAATAAACTTTATGAAAAGCATGCGGTTTTATATTAAAACTGGAAGTTGAACTTAGCATGCTGAAGAGGTGAGATTTGGAAACGGTTATTTCATGGATTATAGATGTAATGTTCCAAAATATGTATTGTGTTATATTAAACTAGAAAAGGCACCAGAGGCTCAGGGACTTGGAGAAAGCCAAAGGGTAGCCATTATATTATAAAGGTACCCCATGCTCAGGGACTTGTAGAAGGCATATGGGTAACCTGGATATAGAAATGGGAGCCCAATGCTCAGGGACTCGTAGAAGGCATTGAGGGCGGCCCGAGTTTTAGTACCTATGTGCCCATAGAGGTATGTACGACGCTGATGTGTTGAGATTACTCCACATAGCTAGGGAAAAATCGACGTTGAGGAGCGTTGAGCATTGCTCCGCCTCAACTAGGGAAAAAGTATATTATAAGAACGAGATTTTTGAGTATGTATCCTGAAACGGGCAAGCATGTTTTCACAATGGTATTGGAGTATAGTTTAATATGACTTGAAGTGTTATGTTTTATGCGAGTTTGATCAGTTTTACAGTTAAAATATACTGTTTTCAGAAAACCGTTACTCACTGAGCTGTTAGCTCATTCTTTTAAATGTTTTCCATTTTCAGGTAGCATAACAGTTCCCGTTGTCGATCAAAGTCGAGGTTTGTCAAGAGCTCATGGATGGTGAGTTTGATAGTGGGTTACGTGACAGGGTAGTCGGTAACTGCTGTCCTCACACTCCGTCTCGGGCTACGGGAGGGTAGTTCGGGATGGGGTGTGACAGATTATCTCTTGGTTCGGTTTTATGCAAACTCATTGCATAAGATGCCCCTATTCGCATGTCTTTACATGAATGATTTAGCATCACATTATTTTTATCAAATACAAAGTGAGCCACATCCATAGTGTCCCTAGGATAAGGTACCTAGCCTTATCCCTGTAATATAGACCATTTTGGCTTTTACTCAAACTTAATCCAATTTTATGTCTACACATATAGTCTAAGTATTCATGCTATAGCTAACATCCAATATTAAAATGTTACTGAATAAACTTCAATAAGATTACACGCAACTCACATATTCAATAACATATTTACTGAATAAACTTCAAAATCAACTTTATTGAAAATAGAATATGTTTATTGTTTATAAACCATGAGTTTTAGGACATAAAACCCAACAGCTTGGTGGTGTCCTAAGAAGGTCTCTGCACATCTTGTTGAAGGAAGAGTTTTGTATTCGTGATTTAGTTAGAAGAAGGAGAAGCTTACCCTAAAGACGGTCTTCAAAGGTAATGTATTTTCCTACTTAACTTCTTCTGAATGGATGCTTCTAGTTTTAATTGTTTATCCTTATGTTTCCCTTCTATGTAATTTGAAGTTTTCAAAAAGAAAATTATTGGCACATGGTGATCACTCACTTCCGCTGAGGATTCAATTCCTTCAAATATGAGATTTTTGTTTGATGTGGCCACATTGTTCCACCAGATGCCGGCGCATTGAACACAGAATTTGCTTCCTTGAATTTTTAACTCTTCTTGATACTTCCCTATTCCTGATTAAAAAGTTCAAACATTCAATATTACTCCACTAGCTTCGAATATCATCTTTCATAGACCTAACTCTCAGGTAGGTTTCCTTGTCAAGGTGTTACCTATGGTCAACTTAAATACCTCTTCCTTGACAAAACCAGCCAAGACAGAATGTTTCCTTGAAAGCTTATTTGACAACTAGTTCTTATAAGTATGTTTTTTTTTTTTTTTAATATAAATTTTAAGAATAATAAAACAAAATAAATGAAAACTAAAACTAGTGTACTTGTACAACTCGTGCTTCTTTTACTTTAGCTTAGCAAGGGATATTAAAGCCTTGGTATTGGTCATCACTTCACCCTAGTATACTTTAATTTTTGTCCATTAACTTTGAAAATAATGCTTTTTTTATTAATTAAACATCGCACCGTGGGGGTGTTGGATTTGATGGAGTTAGAAAACATGCAATGAAAGAAATTAGAATGTAAAGCACTCTAATTACATCAATTTAAAGGAAAAACATGCTTAGATAAATTGAGATACAAAGGTAGTAACATTTACTTGTAGCTTAAAATTCGTTCACGAGAATTTCCAAAAACTGATCACGAATTGTTCACGGACTACCACTAGAGTTACCTTTTTATTCTCAGGCCTTAGAACAGATGGTGGGATCTGAATTTAAGTAGAAAACTGGAGCAAAATGTGAAAAACACTGTTTTTTTGTAGAGAGAAAAAACCTTCCTGTAAGGTTTTTCTTCACACAAATGCCAACCATTTTCAGCTTTTTCTCTTCCTTACTTAAAGAGAATATCATGCATCTCAAATGCACTTGCTGAATCACACCATACTTGGTGAGTAAGGTGTTTTTAGAAAACTGAGTTTGCATGTGAAGGAGAGGTCTCCACCACCTACTTCACCATGCAACCAAAAAATGAAAAGTGATGTTCTCAATTGAAAAATTGAGAAATCAATTTTGATTTTATAAATCAAAATTTCAATTTAATATAATTAATTTAAATAATAATTAATTAACCAATTAATTAATTAATTATATTAAATTAATATTAAATTAATACTTTTCCACTTTTTTTTGACAATTTCAAACTTGATGAATCTCTATTCGCCGGTATAATATTTAAATCACATTTAAATATTATTAAAATTCCAATTTATCTAATTCACAATTAAACAAATCAAATCGTAAAATGATCATTTTTCTAAATTTGAACACTTCAAATTCTCTCAATATATTGTCCTAAGGTTTAGTCCACGACAAGGGAACCTAATGGACCTACAGATCATGAGCTCCAATGATCTGAAATTAACCGGTTAAACTCTTTAACCTAGTTCATTAACATTCGTTAACTACCGAATCACTCCACTGAAGCCTAGTAGCTGCACTCTTCTCACTGTAGGTATATTTCTGTCCATTTGATATAACCATAATTAGTAAGTCGATCCTTCACAAGTTGTTCATAATTATAGTTGGGTCAAAATACCGTTTTACCCCTGTAATTACTTATTGTTTCTTAAGTCCCACTGATCCTCTAATGAACAGTTGGTTTGTGGTCCAACCAACAAATCGAGTCCCTTTCGAGCCAATGAGAGGGTGAGGCTCCTTGTTCAAGACCTGGATTCAGTACTTTAGGGAACAATTTATCTACTATCCTTTAATAAGATAAGAGTAAATTCCATTTTGCAGGGCTATGTCCCCAGCTATCTACTTGATCTTATCCCTAAATGGGAGGCATATTGAGTTGGAAAACTGGCAACTCTCACCCATGTAGATTAAAGGACAATCTCAAACAAACAGAAGTTCATAGTTAACTCAGGATTAAGATCGAGTTACTTAGGTCATCAGGTCGAAATAATCAGTTTTAACAGTAAATAGTGTTATAAGTAAACGTGATTATTTCTTAGTCTAGACTTATGAAAACTCATTGCATAGGATACCCCCCACTCACATGTCTCTACATGAACAATTTAGGATCACATCGTTTGTATCAAATACCAAGTGGGTCGTATCCATAGTGTCCCATGGATAAGGTACTCAGCCTTTATCCATATACTATAAACCTTTTGGCTATTACTTAAACTTGATCCACTTTTATCATATAAAGTCTAAGCATTCACCATATAGCCATGAGTTCTTAGTTTATTGGATTTATATGCAATTCACATATTTAATAACAACTTTAATGAATAAACCTCGTTAACAACTTTATTGAGAATAAAATCCATAAATTACAAACAAGCATTCACCATATGCAGGAAGAAGGAAAAAAGAATAAATAAGACTTAGTCTCATTGCCCGTAGGGAAACAAACCATTGGTTGCAAGTAGATTTACAAGATCAAGCATAAAGCATATGGCTCGCGTCAGAGATACAAACTTACCAATGACGAATGTGCTGGCCTACCTATGGTCATGATTCAGGACTTTAATCGAGCATGTGTGATTTGGCCTGCACTTTATGATCTTAAAAATATCACAACCATCCATTTTAATTGCTCGCTTAGACCACTTACAATTTGGGTGTATACATCGAACACTGTCAACTTTTTGTTTTGATTTCTTAACTCGCAGCTCAAAATTATTCTTAATGACCAACATTGCTAACCTCATCTTCACATCATTCTTATAGAAGAAAATTTCGCCTACTTTAATATCATCCCCTACCCCTGATGAAGAATGTGGTTGTATGATCAAGTCCCCTGTTATGGTGTTACTACTTGTTGCTACGTTGGATTCATTTACCCGAGGCACATTCCTAACAAAATGCCCAAAATCATTTGACAGAATCGGAGTTGGTTGTTTTTCATTTATACCAGGACCACTACCTAAAACAATCAGAGTTGCCTGCGGCACATTAACATATGTCTCAGCCTCTTGTGTCGTCACATGCTCGTTTAAACAAGTCTCAACCCCGATTCCGTTCCCATCCTCTTTTGCTCCCACAGTCGATTGCAATACGTTCATTATATTGTCATTGATGTTGTCGTTTTCTACTGAGACAACCGATGGGACAATATGATACTCATTGACATCCGCACCACACATGGGTTCGTCTTTTATCTCATTGACACAAGCAGAAAATCTGGTACCATTCCCAACCTCTTGATGTCTTTCCTCAAGACTTACAAACATATGAGATCTACTCCGATTGTACTTCGAGAGAAGAAATTGGACATCAGCATTGTTCATTAAGAATACTGGAGGAGAATCAATATTCAACTTGTATTTCACCTTCATTACAACGTTGAACTCTGTCGAACTAACTTGGGTGAGTTCATATACTAAATTTACCAAATATACAAATGTCAATGTGCTTGAAACTAGGATTCCTTTCAAACGACCTCTAGTATATAGTTCTTCTGTGTCGTCCCATGTACCACCAAAATGAATGAACAGATACTTCTTATCCATCCTTCAAGAAAAACAGTGTAGAAAATGATCAGTTAGGAAAATTCAACTATGTAAAATACTCGTTACTCTATCCTCGCCTTTCGACACTCGCTCCTCGTTCCTCGCCACACGATGCTTGATCCTCTCTCCTCGATGCTCATTGTTTCGTACATTCTCTCTCCCCTCATTCTTGCTCCACTAAGAGCTACTTGCTTGCCTCGCTAGTGATGACACACTCACTCACTCACAAGTCAGTTCACTCGCTCTCTTTGTTACGTTCCTAGGTCTCACACAACATAACGTCAGGAAATTTAAAAAAAAAAATAGCATAGCACATTGACTCACTTGAGGTGTGAAATTGATTGTTTATGATTATCCAGTTGCCTTTATAACTTGACTTCTTCCAATACGTTCAGTTCGAAAAAGTGGGTTTCTTGTACGGAAAGTGAGGGAGTGAAAGTATTGGTTCATTTGTGTTTGTTCTTTGTTAATAATAAAAAAAAAAAAATTACTTCACTTTTCAGGCTATAATTTCAAAGGATTACAATTCCCCAAAGTGTGTATGTACAGAGTAGGAGAAAAGTGGCGCGAGTATGTTTGTGTGATCGAGTATATTGCGTGGTAACTATCCCCTTGTAAGGAGCGTATCAAGTAAACGAGTATGACCAACGAGTTTTTGACCTTCGAGTAGCGAGTTAGCGTGTATCGAATAATTTAGTCATTGGGCATCGAGGATGGAGTAATCTGGACCCAGACAGACGCGCAAATGGTTCTCAAGGACAAACTTGAACTTTCACACGTGACTGACGTAAGCAGAAGGCTACTTTTCATTCGTTTTTAAAAGTAAGCCAAAAATCGATTGAGCCTTCTATAGGACGCCATCCGTACAAAATACTAAGAAAAAAAAAGTGAAAATATTGATATTATCTTACACTCTTCAATTTTATGAATAAAATGGATTTCCCCTTTTTATTTTCATTGCACTTCTATGCAACGAAACTGATTTTGAATAATTTTCTCGAATGGGTAACGATTTCTGAGGATGAGGGTTACCCACATCGTCCTTCGTTTGACGCCTTTCACCTCTAGGGTTTCATCTCGGCTCCATCAATACCGGCGGATTCTAAAGTTTCCGGCACCGTCAACCACTGCACCATATCCCTCCGGCAAGAACGAATTGCATTAGTATGTTTTAATTTATTGTTAAATTACTTGCTTGAATCTTCCTATGGCATAGGCCAACTAGACTGCAATTGTTTGATATTTCTCCTTTACATTTTGCATTTTGGTTACTCAAATTCATACCAGTTGGATGCATGATGGTATTAAAATGTTAATAAATCCCACTCGTTGATTTCAATTCTAAACATTAAATGTTTAGATTTGTGGAAAGATTCGTAGATTGAACAATTTCTTATGTTGATTTTAATTTGCAGGACAGATGCTGTCTCTTCTGATTGGAAGATTGTGTAATAAATGACAATGTCGGTATGCAAATGAGCATCTGCCAGATGGAAGCAGTGGTTTTGCAGTCCAGATTATTGACAATAGCGAATTATAGCTCCAAAGGGTCATGTCTTACTAATATGCCTTGCCTAATACATTACTGTGGCTATGAAGCTTTCTTTAATGGACACAATTCAAGCCTTTTCCTGAAATCTGCACCTTTTCCTCGAAAAAGGTAGACGTAGAATTTATAAACTTGTATACGTGTTGGTAGGAGGTCTGGCTATTCTTCTTGCGTATATTTCCATTTTAACTGTTGAATCCTTGGGTAATTAGATGAATGCTTATATTATATCGAGCACTAGAGAGGAATAGTAGGTGTTTTTAGAGAGATTGAGAGATTTTGGGAAGAGGCTTGAAGGGTTGCAAGGTTTAAAGTATATTTATGGGCGTATGCACTCTTTGTTTGTATGCACTCTTTACTTATAAGAAAATGAGAAATTAAGAATGGATACTTAATGTCCACTTTGATAATCATTTTGCTTTTATTTTATATTTTTTAAATTAAACCTGTAAGTTTCTTTATTTTGTGACTTACCTTTTAAAAACATTTTCAAAATCAATGTTAAATTTTTTATTTTAAAAAAATTGTTTCTAGACATTGTTTTTAACATCTTGTTTTGGAATTCAAATATGTGGTGAAAAATGTATCAAGAAAATTATGTGTTGTTAAGAGGCCTGGGCTATTCTTTTTTGCGCATATTTCCATTTTACCATTGAATCCTTGGGTAATTAGATGAATGCATATGTTATATTGAGCACTAGAGAGGAATAGTAGGAATACGTTATATTGAGCACTAGAGATGCTAGGTTTAAAGCATCTTTATGGGCATATCCGCACTTTGTTTGTAATTACCAAGTTGGTCTCATTCATTTGGATTCGACTCCGTTCTTGTAGTTATTGTTGGGACTTTGACTCCTGTAGAATTGTTGTTTTGTATGTTCTTGTACTTCCATTTTTTTTCAATGAAAACTCGGTTATGTATGAAGAAAATTATGTATTAATGGTGTTATGAACATTCCCTTTGTGATGTTACTTCTTACAGTTTCCAGACGAGTAGACATCTCAAGAAATTAGCCTTTGCATTAGATACAGGTGGGGTATTTAGTAATGGTGGGGGAGACAACGTCGATGATGGTGATGAGTCCAATCTGGGTCGTACGCGATTAGGTAGGCTAGTTAGCTCAGGTGCCAGACAATTGCTAGAAAAGCTGAACTCAGCAAGAAAGAACTTCCCTACAAAGATATTTTTGCTTCTTTTGGGTTTCTATACAGCAAATGCACTTGCTACAATTCTTGGGCAGACGGGTGACTGGGATGTTTTGGTTGCTGGTGTGGTGGTTGCTGCCATCGAATGGATCGGTATTCTCATGTACAGGAAGCCGCCTCCTCTATTAACTAGGAGGTTGAAATCATTTATTGTGATGGTAAACTATTGGAAAGCTGGCGTGTGCTTAGGTCTCTTTGTTGATGCGTTCAAATTAGGGAGTTGA

mRNA sequence

ATGGCCCGGGGTTTCATCTCGGCTCCATCAATACCGGCGGATTCTAAAGTTTCCGGCACCGTCAACCACTGCACCATATCCCTCCGGCAAGAACGAATTGCATTAATGGAAGCAGTGGTTTTGCAGTCCAGATTATTGACAATAGCGAATTATAGCTCCAAAGGGTCATGTCTTACTAATATGCCTTGCCTAATACATTACTGTGGCTATGAAGCTTTCTTTAATGGACACAATTCAAGCCTTTTCCTGAAATCTGCACCTTTTCCTCGAAAAAGTTTCCAGACGAGTAGACATCTCAAGAAATTAGCCTTTGCATTAGATACAGGTGGGGTATTTAGTAATGGTGGGGGAGACAACGTCGATGATGGTGATGAGTCCAATCTGGGTCGTACGCGATTAGGTAGGCTAGTTAGCTCAGGTGCCAGACAATTGCTAGAAAAGCTGAACTCAGCAAGAAAGAACTTCCCTACAAAGATATTTTTGCTTCTTTTGGGTTTCTATACAGCAAATGCACTTGCTACAATTCTTGGGCAGACGGGTGACTGGGATGTTTTGGTTGCTGGTGTGGTGGTTGCTGCCATCGAATGGATCGGTATTCTCATGTACAGGAAGCCGCCTCCTCTATTAACTAGGAGGTTGAAATCATTTATTGTGATGGTAAACTATTGGAAAGCTGGCGTGTGCTTAGGTCTCTTTGTTGATGCGTTCAAATTAGGGAGTTGA

Coding sequence (CDS)

ATGGCCCGGGGTTTCATCTCGGCTCCATCAATACCGGCGGATTCTAAAGTTTCCGGCACCGTCAACCACTGCACCATATCCCTCCGGCAAGAACGAATTGCATTAATGGAAGCAGTGGTTTTGCAGTCCAGATTATTGACAATAGCGAATTATAGCTCCAAAGGGTCATGTCTTACTAATATGCCTTGCCTAATACATTACTGTGGCTATGAAGCTTTCTTTAATGGACACAATTCAAGCCTTTTCCTGAAATCTGCACCTTTTCCTCGAAAAAGTTTCCAGACGAGTAGACATCTCAAGAAATTAGCCTTTGCATTAGATACAGGTGGGGTATTTAGTAATGGTGGGGGAGACAACGTCGATGATGGTGATGAGTCCAATCTGGGTCGTACGCGATTAGGTAGGCTAGTTAGCTCAGGTGCCAGACAATTGCTAGAAAAGCTGAACTCAGCAAGAAAGAACTTCCCTACAAAGATATTTTTGCTTCTTTTGGGTTTCTATACAGCAAATGCACTTGCTACAATTCTTGGGCAGACGGGTGACTGGGATGTTTTGGTTGCTGGTGTGGTGGTTGCTGCCATCGAATGGATCGGTATTCTCATGTACAGGAAGCCGCCTCCTCTATTAACTAGGAGGTTGAAATCATTTATTGTGATGGTAAACTATTGGAAAGCTGGCGTGTGCTTAGGTCTCTTTGTTGATGCGTTCAAATTAGGGAGTTGA

Protein sequence

MARGFISAPSIPADSKVSGTVNHCTISLRQERIALMEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQTSRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS

Homology

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BLAST of Clc03G11820 vs. NCBI nr
Match: XP_038878602.1 (ycf20-like protein [Benincasa hispida] >XP_038878603.1 ycf20-like protein [Benincasa hispida] >XP_038878605.1 ycf20-like protein [Benincasa hispida] >XP_038878606.1 ycf20-like protein [Benincasa hispida])

HSP 1 Score: 386.7 bits (992), Expect = 1.4e-103
Identity = 197/211 (93.36%), Postives = 200/211 (94.79%), Query Frame = 0


Query: 30  QERIALMEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFP 89
           Q  I  MEAV+LQSRLLTIANYSSKGSCLTNMPCL+HY G EAFFNGHNSS FLKSA FP
Sbjct: 2   QMSICQMEAVILQSRLLTIANYSSKGSCLTNMPCLLHYWGREAFFNGHNSSPFLKSALFP 61

Query: 90  RKSFQTSRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLN 149
           RKSFQTSRHLKKLAFALDTGGV SNGGGD VDDGD+SNLGRTRLGRLVSSGARQLLEKLN
Sbjct: 62  RKSFQTSRHLKKLAFALDTGGVSSNGGGDKVDDGDDSNLGRTRLGRLVSSGARQLLEKLN 121

Query: 150 SARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLL 209
           SARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLL
Sbjct: 122 SARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLL 181

Query: 210 TRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 241
           TRRLKSFI MVNYWKAGVCLGLFVDAFKLGS
Sbjct: 182 TRRLKSFIAMVNYWKAGVCLGLFVDAFKLGS 212

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BLAST of Clc03G11820 vs. NCBI nr
Match: XP_011660206.1 (ycf20-like protein [Cucumis sativus] >XP_011660207.1 ycf20-like protein [Cucumis sativus] >KGN66645.1 hypothetical protein Csa_007230 [Cucumis sativus])

HSP 1 Score: 368.6 bits (945), Expect = 4.0e-98
Identity = 186/205 (90.73%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 36  MEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQT 95
           M AV+L SRLLT ANYS + SCLTNMPCLIHY GYEA FNG +SS  LKSAPFPRKS QT
Sbjct: 8   MGAVILHSRLLTTANYSPQVSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPRKSLQT 67

Query: 96  SRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 155
           SRH+ KLAFALDTGGV S+GGGDN+DDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF
Sbjct: 68  SRHVNKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 127

Query: 156 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 215
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS
Sbjct: 128 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 187

Query: 216 FIVMVNYWKAGVCLGLFVDAFKLGS 241
           FIVMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 188 FIVMVNYWKAGVCLGLFVDAFKLGS 212

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BLAST of Clc03G11820 vs. NCBI nr
Match: XP_022924878.1 (ycf20-like protein [Cucurbita moschata] >XP_022924885.1 ycf20-like protein [Cucurbita moschata] >XP_022924895.1 ycf20-like protein [Cucurbita moschata] >XP_022924902.1 ycf20-like protein [Cucurbita moschata] >XP_022924910.1 ycf20-like protein [Cucurbita moschata] >XP_022924918.1 ycf20-like protein [Cucurbita moschata] >KAG7022187.1 Ycf20-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 362.8 bits (930), Expect = 2.2e-96
Identity = 181/205 (88.29%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 36  MEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQT 95
           MEA+++QSRLLTIANY SKG CLT MPCLIH  GY A  NGHNS+L LKSAPFPRKSF+T
Sbjct: 1   MEAMIMQSRLLTIANYISKGLCLTYMPCLIHNMGYVAILNGHNSTLCLKSAPFPRKSFRT 60

Query: 96  SRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 155
           SRHL++LAFALDTGGV SNGGGDN+DDG+ESNLGRTRLGRLVS+GARQLLEKLNSARKNF
Sbjct: 61  SRHLQQLAFALDTGGVSSNGGGDNLDDGNESNLGRTRLGRLVSAGARQLLEKLNSARKNF 120

Query: 156 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 215
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMY+KPPPLLTRRLKS
Sbjct: 121 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYKKPPPLLTRRLKS 180

Query: 216 FIVMVNYWKAGVCLGLFVDAFKLGS 241
            IV++NYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LIVLINYWKAGVCLGLFVDAFKLGS 205

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BLAST of Clc03G11820 vs. NCBI nr
Match: XP_023520636.1 (ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520637.1 ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520638.1 ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520639.1 ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520640.1 ycf20-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.3 bits (926), Expect = 6.4e-96
Identity = 180/205 (87.80%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 36  MEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQT 95
           MEA+++QSRLLTIANY SKG CLT MPCLIH  GY A  NGHNS+L LKS PFPRKSF+T
Sbjct: 1   MEAMIMQSRLLTIANYISKGLCLTYMPCLIHNMGYVAILNGHNSTLCLKSVPFPRKSFRT 60

Query: 96  SRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 155
           SRHL++LAFALDTGGV SNGGGDN+DDG+ESNLGRTRLGRLVS+GARQLLEKLNSARKNF
Sbjct: 61  SRHLQQLAFALDTGGVSSNGGGDNLDDGNESNLGRTRLGRLVSAGARQLLEKLNSARKNF 120

Query: 156 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 215
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMY+KPPPLLTRRLKS
Sbjct: 121 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYKKPPPLLTRRLKS 180

Query: 216 FIVMVNYWKAGVCLGLFVDAFKLGS 241
            IV++NYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LIVLINYWKAGVCLGLFVDAFKLGS 205

[Close]

BLAST of Clc03G11820 vs. NCBI nr
Match: XP_022973215.1 (ycf20-like protein [Cucurbita maxima] >XP_022973224.1 ycf20-like protein [Cucurbita maxima] >XP_022973228.1 ycf20-like protein [Cucurbita maxima] >XP_022973233.1 ycf20-like protein [Cucurbita maxima] >XP_022973241.1 ycf20-like protein [Cucurbita maxima] >XP_022973250.1 ycf20-like protein [Cucurbita maxima])

HSP 1 Score: 360.1 bits (923), Expect = 1.4e-95
Identity = 180/205 (87.80%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 36  MEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQT 95
           MEA+++QSRLLTIANY SKG CLT MPCLIH   Y A  NGHNS+L LKSAPFPRKSF+T
Sbjct: 1   MEAMIMQSRLLTIANYISKGLCLTYMPCLIHNMDYVAILNGHNSTLCLKSAPFPRKSFRT 60

Query: 96  SRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 155
           SRHL++LAFALDTGGV SNGGGDN+DDG+ESNLGRTRLGRLVS+GARQLLEKLNSARKNF
Sbjct: 61  SRHLQQLAFALDTGGVSSNGGGDNLDDGNESNLGRTRLGRLVSAGARQLLEKLNSARKNF 120

Query: 156 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 215
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMY+KPPPLLTRRLKS
Sbjct: 121 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYKKPPPLLTRRLKS 180

Query: 216 FIVMVNYWKAGVCLGLFVDAFKLGS 241
            IV++NYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LIVLINYWKAGVCLGLFVDAFKLGS 205

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BLAST of Clc03G11820 vs. ExPASy Swiss-Prot
Match: O80813 (Ycf20-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g65420 PE=2 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 3.1e-53
Identity = 109/164 (66.46%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 79  SSLFLKSAPFPRKSFQTSRHLKKLAFALDTGGVFSNGGGDNVD-DGDESNLGRTRLGRLV 138
           SS+ L S P+P KSFQ  R  +K+AFALDTG       G+  + +GD + LG TRLGR+ 
Sbjct: 34  SSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGRIA 93

Query: 139 SSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWI 198
            +G +QLL K+NSARKNFP KIFLLLLGFYTANALATILGQTGDWDVLVAG+VVAAIE I
Sbjct: 94  IAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGI 153

Query: 199 GILMYRKP-PPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 241
           G+LMY+KP   + + +L+SF+V +N+WKAGVCLGLFVDAFKLGS
Sbjct: 154 GMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 197

[Close]

BLAST of Clc03G11820 vs. ExPASy Swiss-Prot
Match: Q9MUL5 (Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.5e-18
Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 128 LGRTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVA 187
           +  TRL    ++  + L  K+ +   NFP KI LLLLGF+ A  LAT+ GQTGDWDVLVA
Sbjct: 1   MSNTRLTLFFTNIFQLLDSKIQNYSINFPIKILLLLLGFFIATVLATVFGQTGDWDVLVA 60

Query: 188 GVVVAAIEWIGILMYRKPPPLLTRRLK---SF--IVMVNYWKAGVCLGLFVDAFKLGS 241
           G++VA IE +G  MY K    ++++     SF  ++ +NY K G+  GLFVDAFKLGS
Sbjct: 61  GILVAMIEILGNKMYSK--KYISKKQVFDISFLSLIGINYIKIGLIFGLFVDAFKLGS 116

[Close]

BLAST of Clc03G11820 vs. ExPASy Swiss-Prot
Match: Q1XDS2 (Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.5e-12
Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 0


Query: 130 RTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGV 189
           +TRL    +   + L  KL  +     T +  LLLGF+ +  L+TI GQTGDW ++ A +
Sbjct: 3   KTRLSTFFAYLIKNLNNKLYYSLSELTTGLISLLLGFFISTGLSTIPGQTGDWGIIAASL 62

Query: 190 VVAAIEWIGILMYRKPPPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 241
           +VAA E    ++Y        ++L   I + N +K G+  GLFVDAFKLGS
Sbjct: 63  IVAATELTSKIVYSS-----HKQLNIKINLFNNFKIGITYGLFVDAFKLGS 108

[Close]

BLAST of Clc03G11820 vs. ExPASy Swiss-Prot
Match: P51214 (Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.6e-12
Identity = 43/111 (38.74%), Postives = 61/111 (54.95%), Query Frame = 0


Query: 130 RTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGV 189
           RT+L    S   + L  +L  +       +  LLLGF+ +  L+TI GQTGDW ++ A +
Sbjct: 3   RTKLSIFFSYFVQNLSSRLYYSLNELTAGLISLLLGFFISTGLSTIPGQTGDWGIIAASL 62

Query: 190 VVAAIEWIGILMYRKPPPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 241
           +VAAIE +  ++Y        R     I ++N  K G+  GLFVDAFKLGS
Sbjct: 63  IVAAIELVSKIVYSNKKKYGVR-----INLLNNLKIGITYGLFVDAFKLGS 108

[Close]

BLAST of Clc03G11820 vs. ExPASy Swiss-Prot
Match: P72983 (Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1509 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.2e-07
Identity = 34/111 (30.63%), Postives = 55/111 (49.55%), Query Frame = 0


Query: 130 RTRLGRLVSSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGV 189
           RTRL  +V    +QL +   +  +     +   L GF+   A+AT  GQ   WDV+ A  
Sbjct: 3   RTRLNTIVEVRGQQLSQFFRNPWRRISLSLLSFLFGFFVGTAVATTAGQNSQWDVVCAAF 62

Query: 190 VVAAIEWIGILMYRKPPPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 241
           ++   E +    YR+   +   + +    ++N +K GV   LF++AFKLGS
Sbjct: 63  ILLFCELVNRWFYRRGVKMGDLQAE----VLNIFKMGVSYSLFLEAFKLGS 109

[Close]

BLAST of Clc03G11820 vs. ExPASy TrEMBL
Match: A0A0A0LXR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652280 PE=3 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 2.0e-98
Identity = 186/205 (90.73%), Postives = 192/205 (93.66%), Query Frame = 0


Query: 36  MEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQT 95
           M AV+L SRLLT ANYS + SCLTNMPCLIHY GYEA FNG +SS  LKSAPFPRKS QT
Sbjct: 8   MGAVILHSRLLTTANYSPQVSCLTNMPCLIHYWGYEAIFNGRSSSFLLKSAPFPRKSLQT 67

Query: 96  SRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 155
           SRH+ KLAFALDTGGV S+GGGDN+DDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF
Sbjct: 68  SRHVNKLAFALDTGGVSSSGGGDNIDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 127

Query: 156 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 215
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS
Sbjct: 128 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 187

Query: 216 FIVMVNYWKAGVCLGLFVDAFKLGS 241
           FIVMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 188 FIVMVNYWKAGVCLGLFVDAFKLGS 212

[Close]

BLAST of Clc03G11820 vs. ExPASy TrEMBL
Match: A0A6J1EGC6 (ycf20-like protein OS=Cucurbita moschata OX=3662 GN=LOC111432291 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.1e-96
Identity = 181/205 (88.29%), Postives = 194/205 (94.63%), Query Frame = 0


Query: 36  MEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQT 95
           MEA+++QSRLLTIANY SKG CLT MPCLIH  GY A  NGHNS+L LKSAPFPRKSF+T
Sbjct: 1   MEAMIMQSRLLTIANYISKGLCLTYMPCLIHNMGYVAILNGHNSTLCLKSAPFPRKSFRT 60

Query: 96  SRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 155
           SRHL++LAFALDTGGV SNGGGDN+DDG+ESNLGRTRLGRLVS+GARQLLEKLNSARKNF
Sbjct: 61  SRHLQQLAFALDTGGVSSNGGGDNLDDGNESNLGRTRLGRLVSAGARQLLEKLNSARKNF 120

Query: 156 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 215
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMY+KPPPLLTRRLKS
Sbjct: 121 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYKKPPPLLTRRLKS 180

Query: 216 FIVMVNYWKAGVCLGLFVDAFKLGS 241
            IV++NYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LIVLINYWKAGVCLGLFVDAFKLGS 205

[Close]

BLAST of Clc03G11820 vs. ExPASy TrEMBL
Match: A0A6J1ICF7 (ycf20-like protein OS=Cucurbita maxima OX=3661 GN=LOC111471783 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.9e-96
Identity = 180/205 (87.80%), Postives = 193/205 (94.15%), Query Frame = 0


Query: 36  MEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQT 95
           MEA+++QSRLLTIANY SKG CLT MPCLIH   Y A  NGHNS+L LKSAPFPRKSF+T
Sbjct: 1   MEAMIMQSRLLTIANYISKGLCLTYMPCLIHNMDYVAILNGHNSTLCLKSAPFPRKSFRT 60

Query: 96  SRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARKNF 155
           SRHL++LAFALDTGGV SNGGGDN+DDG+ESNLGRTRLGRLVS+GARQLLEKLNSARKNF
Sbjct: 61  SRHLQQLAFALDTGGVSSNGGGDNLDDGNESNLGRTRLGRLVSAGARQLLEKLNSARKNF 120

Query: 156 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKS 215
           PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMY+KPPPLLTRRLKS
Sbjct: 121 PTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYKKPPPLLTRRLKS 180

Query: 216 FIVMVNYWKAGVCLGLFVDAFKLGS 241
            IV++NYWKAGVCLGLFVDAFKLGS
Sbjct: 181 LIVLINYWKAGVCLGLFVDAFKLGS 205

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BLAST of Clc03G11820 vs. ExPASy TrEMBL
Match: A0A6J1D763 (ycf20-like protein OS=Momordica charantia OX=3673 GN=LOC111018246 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.0e-86
Identity = 172/207 (83.09%), Postives = 185/207 (89.37%), Query Frame = 0


Query: 36  MEAVVLQSRLLTIANYSSKGSCLTNMPCLIHYCGYEAFFNGHNSSLFLKSAPFPRKSFQT 95
           M A++LQSRLL I +YSS+GSCLTN+ CL++Y GY A FN  NS+  LKSAPFPR+SFQT
Sbjct: 6   MGAMILQSRLLKIESYSSRGSCLTNISCLVYYWGYAAVFNAQNSTRCLKSAPFPRRSFQT 65

Query: 96  SRHL--KKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSARK 155
           SRHL  +KLAFALDT G+  NGG DN  DGDESNLGRTRLGRLVSS ARQLLEKLNSARK
Sbjct: 66  SRHLRKRKLAFALDTSGLPRNGGEDN-PDGDESNLGRTRLGRLVSSAARQLLEKLNSARK 125

Query: 156 NFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRL 215
           NFP KIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIE IG+LMYRKPPPLLTRRL
Sbjct: 126 NFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEGIGVLMYRKPPPLLTRRL 185

Query: 216 KSFIVMVNYWKAGVCLGLFVDAFKLGS 241
           KSFIVM+NYWKAGVCLGLFVDAFKLGS
Sbjct: 186 KSFIVMINYWKAGVCLGLFVDAFKLGS 211

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BLAST of Clc03G11820 vs. ExPASy TrEMBL
Match: A0A5A7T5T0 (Ycf20-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664G00190 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.7e-73
Identity = 144/149 (96.64%), Postives = 147/149 (98.66%), Query Frame = 0


Query: 92  SFQTSRHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSA 151
           SFQTSRH+ K+AFALDTGGV S+GGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSA
Sbjct: 21  SFQTSRHVNKIAFALDTGGVSSSGGGDNVDDGDESNLGRTRLGRLVSSGARQLLEKLNSA 80

Query: 152 RKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTR 211
           RKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTR
Sbjct: 81  RKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTR 140

Query: 212 RLKSFIVMVNYWKAGVCLGLFVDAFKLGS 241
           RLKSFIVMVNYWKAGVCLGLFVDAFKLGS
Sbjct: 141 RLKSFIVMVNYWKAGVCLGLFVDAFKLGS 169

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BLAST of Clc03G11820 vs. TAIR 10
Match: AT1G65420.1 (Protein of unknown function (DUF565) )

HSP 1 Score: 209.9 bits (533), Expect = 2.2e-54
Identity = 109/164 (66.46%), Postives = 131/164 (79.88%), Query Frame = 0


Query: 79  SSLFLKSAPFPRKSFQTSRHLKKLAFALDTGGVFSNGGGDNVD-DGDESNLGRTRLGRLV 138
           SS+ L S P+P KSFQ  R  +K+AFALDTG       G+  + +GD + LG TRLGR+ 
Sbjct: 34  SSITLTSFPYPMKSFQIRRPNRKIAFALDTGSSIPGDSGEGQEMNGDRTGLGSTRLGRIA 93

Query: 139 SSGARQLLEKLNSARKNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWI 198
            +G +QLL K+NSARKNFP KIFLLLLGFYTANALATILGQTGDWDVLVAG+VVAAIE I
Sbjct: 94  IAGGKQLLGKINSARKNFPMKIFLLLLGFYTANALATILGQTGDWDVLVAGIVVAAIEGI 153

Query: 199 GILMYRKP-PPLLTRRLKSFIVMVNYWKAGVCLGLFVDAFKLGS 241
           G+LMY+KP   + + +L+SF+V +N+WKAGVCLGLFVDAFKLGS
Sbjct: 154 GMLMYKKPSSSMFSGKLQSFVVFMNFWKAGVCLGLFVDAFKLGS 197

[Close]

BLAST of Clc03G11820 vs. TAIR 10
Match: AT3G56830.1 (Protein of unknown function (DUF565) )

HSP 1 Score: 112.5 bits (280), Expect = 4.9e-25
Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 97  RHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRT----RLGRLVSSGARQLLEKLNSAR 156
           RH +++++      + S+ GGD  D    S+   +    RL + +     +LL K+   +
Sbjct: 48  RHQRRMSWTT----IKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKLLVKIQEIK 107

Query: 157 KNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRR 216
           K+ P K+F LL+GFY+A A +T +GQTGDWDVL AG+ V  +E IG LMYR   PL+  +
Sbjct: 108 KDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRASIPLI-NK 167

Query: 217 LKSFIVMVNYWKAGVCLGLFVDAFK 238
           ++S I M NYWK G+ LGLF+D+FK
Sbjct: 168 MRSTITMFNYWKTGLALGLFLDSFK 187

[Close]

BLAST of Clc03G11820 vs. TAIR 10
Match: AT3G56830.2 (Protein of unknown function (DUF565) )

HSP 1 Score: 112.5 bits (280), Expect = 4.9e-25
Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 97  RHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRT----RLGRLVSSGARQLLEKLNSAR 156
           RH +++++      + S+ GGD  D    S+   +    RL + +     +LL K+   +
Sbjct: 48  RHQRRMSWTT----IKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKLLVKIQEIK 107

Query: 157 KNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRR 216
           K+ P K+F LL+GFY+A A +T +GQTGDWDVL AG+ V  +E IG LMYR   PL+  +
Sbjct: 108 KDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRASIPLI-NK 167

Query: 217 LKSFIVMVNYWKAGVCLGLFVDAFK 238
           ++S I M NYWK G+ LGLF+D+FK
Sbjct: 168 MRSTITMFNYWKTGLALGLFLDSFK 187

[Close]

BLAST of Clc03G11820 vs. TAIR 10
Match: AT3G56830.3 (Protein of unknown function (DUF565) )

HSP 1 Score: 112.5 bits (280), Expect = 4.9e-25
Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 97  RHLKKLAFALDTGGVFSNGGGDNVDDGDESNLGRT----RLGRLVSSGARQLLEKLNSAR 156
           RH +++++      + S+ GGD  D    S+   +    RL + +     +LL K+   +
Sbjct: 48  RHQRRMSWTT----IKSSVGGDRFDPASGSSSNNSSRGLRLIKAIQVLRSKLLVKIQEIK 107

Query: 157 KNFPTKIFLLLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRR 216
           K+ P K+F LL+GFY+A A +T +GQTGDWDVL AG+ V  +E IG LMYR   PL+  +
Sbjct: 108 KDLPKKLFFLLVGFYSATAFSTFIGQTGDWDVLSAGLAVLVVECIGALMYRASIPLI-NK 167

Query: 217 LKSFIVMVNYWKAGVCLGLFVDAFK 238
           ++S I M NYWK G+ LGLF+D+FK
Sbjct: 168 MRSTITMFNYWKTGLALGLFLDSFK 187

[Close]

BLAST of Clc03G11820 vs. TAIR 10
Match: AT5G43050.1 (Protein of unknown function (DUF565) )

HSP 1 Score: 42.0 bits (97), Expect = 8.1e-04
Identity = 29/80 (36.25%), Postives = 41/80 (51.25%), Query Frame = 0


Query: 162 LLLGFYTANALATILGQTGDWDVLVAGVVVAAIEWIGILMYRKPPPLLTRRLKSF-IVMV 221
           LL GFY A  ++   G  G  DV+ A + V   E++    Y       +R   +F I ++
Sbjct: 86  LLGGFYVAQTISLSFGALGVNDVIAAVLCVLLTEYVTRFYY-------SRTTVTFPIALL 145

Query: 222 NYWKAGVCLGLFVDAFKLGS 241
           N +K G   GLF+DAFKL S
Sbjct: 146 NNFKMGFTYGLFIDAFKLAS 158

The following BLAST results are available for this feature:

BLAST of Clc03G11820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878602.1	1.4e-103	93.36	ycf20-like protein [Benincasa hispida] >XP_038878603.1 ycf20-like protein [Benin...	[more]
XP_011660206.1	4.0e-98	90.73	ycf20-like protein [Cucumis sativus] >XP_011660207.1 ycf20-like protein [Cucumis...	[more]
XP_022924878.1	2.2e-96	88.29	ycf20-like protein [Cucurbita moschata] >XP_022924885.1 ycf20-like protein [Cucu...	[more]
XP_023520636.1	6.4e-96	87.80	ycf20-like protein [Cucurbita pepo subsp. pepo] >XP_023520637.1 ycf20-like prote...	[more]
XP_022973215.1	1.4e-95	87.80	ycf20-like protein [Cucurbita maxima] >XP_022973224.1 ycf20-like protein [Cucurb...	[more]

BLAST of Clc03G11820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80813	3.1e-53	66.46	Ycf20-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g65420 PE=2 SV=2	[more]
Q9MUL5	1.5e-18	48.31	Uncharacterized protein ycf20 OS=Mesostigma viride OX=41882 GN=ycf20 PE=3 SV=1	[more]
Q1XDS2	3.5e-12	38.74	Uncharacterized protein ycf20 OS=Pyropia yezoensis OX=2788 GN=ycf20 PE=3 SV=1	[more]
P51214	4.6e-12	38.74	Uncharacterized protein ycf20 OS=Porphyra purpurea OX=2787 GN=ycf20 PE=3 SV=1	[more]
P72983	1.2e-07	30.63	Ycf20-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]

BLAST of Clc03G11820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXR2	2.0e-98	90.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G652280 PE=3 SV=1	[more]
A0A6J1EGC6	1.1e-96	88.29	ycf20-like protein OS=Cucurbita moschata OX=3662 GN=LOC111432291 PE=3 SV=1	[more]
A0A6J1ICF7	6.9e-96	87.80	ycf20-like protein OS=Cucurbita maxima OX=3661 GN=LOC111471783 PE=3 SV=1	[more]
A0A6J1D763	1.0e-86	83.09	ycf20-like protein OS=Momordica charantia OX=3673 GN=LOC111018246 PE=3 SV=1	[more]
A0A5A7T5T0	1.7e-73	96.64	Ycf20-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84664...	[more]

BLAST of Clc03G11820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65420.1	2.2e-54	66.46	Protein of unknown function (DUF565)	[more]
AT3G56830.1	4.9e-25	42.07	Protein of unknown function (DUF565)	[more]
AT3G56830.2	4.9e-25	42.07	Protein of unknown function (DUF565)	[more]
AT3G56830.3	4.9e-25	42.07	Protein of unknown function (DUF565)	[more]
AT5G43050.1	8.1e-04	36.25	Protein of unknown function (DUF565)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007572	Uncharacterised protein family Ycf20	PFAM	PF04483	DUF565	coord: 178..240 e-value: 1.6E-21 score: 76.5
IPR007572	Uncharacterised protein family Ycf20	PANTHER	PTHR33787	FAMILY NOT NAMED	coord: 39..240
None	No IPR available	PANTHER	PTHR33787:SF4	YCF20-LIKE PROTEIN	coord: 39..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G11820.2	Clc03G11820.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane