Clc03G11390 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G11390
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	AP2/ERF and B3 domain-containing transcription factor RAV1-like
Location	ClcChr03: 14921658 .. 14922851 (-)
RNA-Seq Expression	Clc03G11390
Synteny	Clc03G11390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATATATATATATATATATATTCCACCCCCTGAGACCCTCAGTTTCCATTCATTTCTCTCCCAACCCCAAATCTGTCTCTTATTTCCTTTTTGTTCCATTTCTCTCTTACACCAATTACCAAAATCCAAATTAATTAAAAATAATGGACGCAAGCTCTATAGACGAAAGCACCGCCAGTGACTCCACCTCCATTTCTCCCGTCACTCCATTACTCTTCCACTCATCGCCCTCCGCTACGGCGGAGGCCGAGTCCCGTAAACTTCCTTCTTCCCGTTTCAAAGGTGTCGTCCCTCAGCCCAACGGCCGATGGGGCGCTCAGATTTACGAGAAACACCAAAGAGTATGGCTAGGCACTTTCAACGAAGAACACGACGCCGCCAAGGCTTACGACATCGCCGCCCTCCGCTTCCGTGGCCGCGACGCCGTCACCAACTTCAAACCCCTCCACCACGACGACCACGCCGCCGTCGAGGCCGACTTTCTCAACTCCCACTCTAAGCTCGAGATCGTGGACATGCTCCGCAAACACACCTACAATGACGAACTCCAGCAGAGCAAACGCCAGAGGGGGCCCACGACGGCGGATTCAGCCTCCGGAACGTCCCCTAATTACTCTGGGTGGGATTCGAAGAGGGAAGTGCTGTTCGAGAAAACCGTGACGCCGAGTGACGTGGGGAAGCTGAACAGGCTGGTGATTCCGAAGCAACACGCGGAGAAGAATTTCCCGATGGGGGAGGGGGTGGTTCTAGGGAAAGGAATGCTTTTAAACTTCGAGGATATGGGAGGGAAGGTTTGGCGGTTCCGGTACTCGTATTGGAATAGCAGCCAGAGCTATGTGTTGACTAAAGGCTGGAGCCGCTTCGTTAAAGACAACACTCTCCGAGCCGGAGATGTGGTTCGGTTCCTCCGCTCCACCGGCCCAGATAAGCAGCTTTACATCCATGCTAACCCCACCCCTGGACCCGCAATTAACCCGGTTCATGTTGTCAAGCTTTTTGGAGTCAATATTTTGCAATTGCCAGTGGGGAAGACAGAAGGGGTATTCTTGGAATTACAACCTACCAAGAAGCAAAGAATAATCAAACCTTTGTAAAACACACATAATCAATTTTACCTTTTTTCTTTTTGCCAAGTTCCCCAACCTGACTTGTATTAACCCCCAAAAATCACAACACATTTCCTTTTTTTTTT

mRNA sequence

TATATATATATATATATATATATTCCACCCCCTGAGACCCTCAGTTTCCATTCATTTCTCTCCCAACCCCAAATCTGTCTCTTATTTCCTTTTTGTTCCATTTCTCTCTTACACCAATTACCAAAATCCAAATTAATTAAAAATAATGGACGCAAGCTCTATAGACGAAAGCACCGCCAGTGACTCCACCTCCATTTCTCCCGTCACTCCATTACTCTTCCACTCATCGCCCTCCGCTACGGCGGAGGCCGAGTCCCGTAAACTTCCTTCTTCCCGTTTCAAAGGTGTCGTCCCTCAGCCCAACGGCCGATGGGGCGCTCAGATTTACGAGAAACACCAAAGAGTATGGCTAGGCACTTTCAACGAAGAACACGACGCCGCCAAGGCTTACGACATCGCCGCCCTCCGCTTCCGTGGCCGCGACGCCGTCACCAACTTCAAACCCCTCCACCACGACGACCACGCCGCCGTCGAGGCCGACTTTCTCAACTCCCACTCTAAGCTCGAGATCGTGGACATGCTCCGCAAACACACCTACAATGACGAACTCCAGCAGAGCAAACGCCAGAGGGGGCCCACGACGGCGGATTCAGCCTCCGGAACGTCCCCTAATTACTCTGGGTGGGATTCGAAGAGGGAAGTGCTGTTCGAGAAAACCGTGACGCCGAGTGACGTGGGGAAGCTGAACAGGCTGGTGATTCCGAAGCAACACGCGGAGAAGAATTTCCCGATGGGGGAGGGGGTGGTTCTAGGGAAAGGAATGCTTTTAAACTTCGAGGATATGGGAGGGAAGGTTTGGCGGTTCCGGTACTCGTATTGGAATAGCAGCCAGAGCTATGTGTTGACTAAAGGCTGGAGCCGCTTCGTTAAAGACAACACTCTCCGAGCCGGAGATGTGGTTCGGTTCCTCCGCTCCACCGGCCCAGATAAGCAGCTTTACATCCATGCTAACCCCACCCCTGGACCCGCAATTAACCCGGTTCATGTTGTCAAGCTTTTTGGAGTCAATATTTTGCAATTGCCAGTGGGGAAGACAGAAGGGGTATTCTTGGAATTACAACCTACCAAGAAGCAAAGAATAATCAAACCTTTGTAAAACACACATAATCAATTTTACCTTTTTTCTTTTTGCCAAGTTCCCCAACCTGACTTGTATTAACCCCCAAAAATCACAACACATTTCCTTTTTTTTTT

Coding sequence (CDS)

ATGGACGCAAGCTCTATAGACGAAAGCACCGCCAGTGACTCCACCTCCATTTCTCCCGTCACTCCATTACTCTTCCACTCATCGCCCTCCGCTACGGCGGAGGCCGAGTCCCGTAAACTTCCTTCTTCCCGTTTCAAAGGTGTCGTCCCTCAGCCCAACGGCCGATGGGGCGCTCAGATTTACGAGAAACACCAAAGAGTATGGCTAGGCACTTTCAACGAAGAACACGACGCCGCCAAGGCTTACGACATCGCCGCCCTCCGCTTCCGTGGCCGCGACGCCGTCACCAACTTCAAACCCCTCCACCACGACGACCACGCCGCCGTCGAGGCCGACTTTCTCAACTCCCACTCTAAGCTCGAGATCGTGGACATGCTCCGCAAACACACCTACAATGACGAACTCCAGCAGAGCAAACGCCAGAGGGGGCCCACGACGGCGGATTCAGCCTCCGGAACGTCCCCTAATTACTCTGGGTGGGATTCGAAGAGGGAAGTGCTGTTCGAGAAAACCGTGACGCCGAGTGACGTGGGGAAGCTGAACAGGCTGGTGATTCCGAAGCAACACGCGGAGAAGAATTTCCCGATGGGGGAGGGGGTGGTTCTAGGGAAAGGAATGCTTTTAAACTTCGAGGATATGGGAGGGAAGGTTTGGCGGTTCCGGTACTCGTATTGGAATAGCAGCCAGAGCTATGTGTTGACTAAAGGCTGGAGCCGCTTCGTTAAAGACAACACTCTCCGAGCCGGAGATGTGGTTCGGTTCCTCCGCTCCACCGGCCCAGATAAGCAGCTTTACATCCATGCTAACCCCACCCCTGGACCCGCAATTAACCCGGTTCATGTTGTCAAGCTTTTTGGAGTCAATATTTTGCAATTGCCAGTGGGGAAGACAGAAGGGGTATTCTTGGAATTACAACCTACCAAGAAGCAAAGAATAATCAAACCTTTGTAA

Protein sequence

MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKPLHHDDHAAVEADFLNSHSKLEIVDMLRKHTYNDELQQSKRQRGPTTADSASGTSPNYSGWDSKREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINPVHVVKLFGVNILQLPVGKTEGVFLELQPTKKQRIIKPL

Homology

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BLAST of Clc03G11390 vs. NCBI nr
Match: XP_038906611.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Benincasa hispida])

HSP 1 Score: 597.4 bits (1539), Expect = 7.0e-167
Identity = 301/322 (93.48%), Postives = 306/322 (95.03%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60
           MDASSIDESTASDSTS+SPVTPLLFHSSPS TAEAESRKLPSSRFKGVVPQPNGRWGAQI
Sbjct: 1   MDASSIDESTASDSTSVSPVTPLLFHSSPSPTAEAESRKLPSSRFKGVVPQPNGRWGAQI 60

Query: 61  YEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKPLHHDDHAAVEADFLNSHSKL 120
           YEKHQRVWLGTFN+EHDAAKAYDIAALRFRGRDAVTNFKPL HDD+AAVEADFLNSHSKL
Sbjct: 61  YEKHQRVWLGTFNQEHDAAKAYDIAALRFRGRDAVTNFKPLRHDDNAAVEADFLNSHSKL 120

Query: 121 EIVDMLRKHTYNDELQQSKRQRGPT--TADSASGTSPNYSGWDSKREVLFEKTVTPSDVG 180
           EIVDMLRKHTYNDELQQSKR RG T  TADSASG+ PNYSG DS REVLFEKTVTPSDVG
Sbjct: 121 EIVDMLRKHTYNDELQQSKRHRGATAATADSASGSFPNYSGSDSNREVLFEKTVTPSDVG 180

Query: 181 KLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWS 240
           KLNRLVIPKQHAEKNFPMG+GVV GKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWS
Sbjct: 181 KLNRLVIPKQHAEKNFPMGDGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWS 240

Query: 241 RFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINPVHVVKLFGVNILQLPVG--- 300
           RFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGP INPVHVVKLFGVNILQLPVG   
Sbjct: 241 RFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPGINPVHVVKLFGVNILQLPVGKNT 300

Query: 301 -KTEGVFLELQPTKKQRIIKPL 317
            KTEGVFLEL PTKKQRIIKPL
Sbjct: 301 TKTEGVFLELHPTKKQRIIKPL 322

[Close]

BLAST of Clc03G11390 vs. NCBI nr
Match: XP_004151060.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucumis sativus] >KAE8648389.1 hypothetical protein Csa_007953 [Cucumis sativus])

HSP 1 Score: 562.0 bits (1447), Expect = 3.3e-156
Identity = 290/319 (90.91%), Postives = 296/319 (92.79%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60
           MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI
Sbjct: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60

Query: 61  YEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKP-LHHDDHAAVEADFLNSHSK 120
           YEKHQRVWLGTFNEE+DAAKAYDIAALRFRGRDAVTNFKP L+HD   A+EADFLNSHSK
Sbjct: 61  YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDNALEADFLNSHSK 120

Query: 121 LEIVDMLRKHTYNDELQQSKR-QRGPTTADSASGTSPNYSGWDSKREVLFEKTVTPSDVG 180
           LEIVDMLRKHTYN+ELQQSKR QRG    D  SG+ P+Y G DS REVLFEKTVTPSDVG
Sbjct: 121 LEIVDMLRKHTYNEELQQSKRQQRGAMAVD--SGSFPHYPGSDSNREVLFEKTVTPSDVG 180

Query: 181 KLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWS 240
           KLNRLVIPKQHAEKNFPM EGVV GKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWS
Sbjct: 181 KLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWS 240

Query: 241 RFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINPVHVVKLFGVNILQLPVGKTE 300
           RFVKDNTLRAGDVVRFLRSTGPDKQLYIHANP   P INPVHVVKLFGVNILQLPVGKTE
Sbjct: 241 RFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPISAPGINPVHVVKLFGVNILQLPVGKTE 300

Query: 301 GVFLEL-QPTKKQRIIKPL 317
           G FLEL QPTKKQRIIKPL
Sbjct: 301 GAFLELQQPTKKQRIIKPL 317

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BLAST of Clc03G11390 vs. NCBI nr
Match: KAA0066636.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucumis melo var. makuwa] >TYK04081.1 AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucumis melo var. makuwa])

HSP 1 Score: 555.8 bits (1431), Expect = 2.3e-154
Identity = 290/323 (89.78%), Postives = 297/323 (91.95%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60
           M+ASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI
Sbjct: 1   MEASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60

Query: 61  YEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKP-LHHDDHAAVEADFLNSHSK 120
           YEKHQRVWLGTFNEE+DAAKAYDIAALRFRGRDAVTNFKP L+HD   A+EADFLNSHSK
Sbjct: 61  YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSHSK 120

Query: 121 LEIVDMLRKHTYNDELQQSKR-QRGPTTADSASGTSPNY----SGWDSKREVLFEKTVTP 180
           LEIVDMLRKHTYN+ELQQSKR QRG    D  SG+ P+Y    SG DSKREVLFEKTVTP
Sbjct: 121 LEIVDMLRKHTYNEELQQSKRHQRGAMAVD--SGSFPHYSGSGSGSDSKREVLFEKTVTP 180

Query: 181 SDVGKLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 240
           SDVGKLNRLVIPKQHAEKNFPM EGVV GKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT
Sbjct: 181 SDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 240

Query: 241 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINPVHVVKLFGVNILQLPV 300
           KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANP   P I PVHVVKLFGVNILQLPV
Sbjct: 241 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPINAPGIKPVHVVKLFGVNILQLPV 300

Query: 301 GKTEGVFLEL-QPTKKQRIIKPL 317
           GKTEG FLEL QPTKKQRIIKPL
Sbjct: 301 GKTEGAFLELQQPTKKQRIIKPL 321

[Close]

BLAST of Clc03G11390 vs. NCBI nr
Match: XP_008465773.1 (PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucumis melo] >AML83922.1 RAV1 [Cucumis melo])

HSP 1 Score: 555.4 bits (1430), Expect = 3.1e-154
Identity = 289/323 (89.47%), Postives = 297/323 (91.95%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60
           M+ASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI
Sbjct: 1   MEASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60

Query: 61  YEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKP-LHHDDHAAVEADFLNSHSK 120
           YEKHQRVWLGTFNEE+DAAKAYDIAALRFRGRDAVTNFKP L+HD   A+EADFLNSHSK
Sbjct: 61  YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSHSK 120

Query: 121 LEIVDMLRKHTYNDELQQSKR-QRGPTTADSASGTSPNY----SGWDSKREVLFEKTVTP 180
           LEIVDMLRKHTYN+ELQQSKR QRG    D  SG+ P+Y    SG DSKREVLFEKTVTP
Sbjct: 121 LEIVDMLRKHTYNEELQQSKRHQRGAMAVD--SGSFPHYSGSGSGSDSKREVLFEKTVTP 180

Query: 181 SDVGKLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 240
           SDVGKLNRLVIPKQHAEKNFPM EGVV GKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT
Sbjct: 181 SDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 240

Query: 241 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINPVHVVKLFGVNILQLPV 300
           KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANP   P I PVHVVKLFGVNILQLPV
Sbjct: 241 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPINAPGIKPVHVVKLFGVNILQLPV 300

Query: 301 GKTEGVFLEL-QPTKKQRIIKPL 317
           GKTEG FLEL QPTKKQR+IKPL
Sbjct: 301 GKTEGAFLELQQPTKKQRVIKPL 321

[Close]

BLAST of Clc03G11390 vs. NCBI nr
Match: XP_022922118.1 (AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita moschata])

HSP 1 Score: 491.5 bits (1264), Expect = 5.4e-135
Identity = 261/327 (79.82%), Postives = 278/327 (85.02%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPS--ATAEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDES  SDSTSISPVTPLLFHSSP+     EAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 1   MDASSIDESRGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60

Query: 61  QIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKPL-HHDDHAAVEADFLNSH 120
           QIYEKHQRVWLGTFN+EH AA AYDIAALRFRGRDAVTNFK L   DD  A+E +FLNSH
Sbjct: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDEDDKDAMEGEFLNSH 120

Query: 121 SKLEIVDMLRKHTYNDELQQSKRQRGPTTADSASGTSPNYSGWDSKREVLFEKTVTPSDV 180
           SKLEIVDMLRKHTYN+EL+QSKRQRG   A +A+ T+ ++SG DSKREVLFEKTVTPSDV
Sbjct: 121 SKLEIVDMLRKHTYNEELEQSKRQRG---AIAAANTAVHHSGVDSKREVLFEKTVTPSDV 180

Query: 181 GKLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGW 240
           GKLNRLVIPKQHAEKNFPMGEGV  GKGMLLN EDMGGKVWRFRYSYWNSSQSYVLTKGW
Sbjct: 181 GKLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKGW 240

Query: 241 SRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINPVHVVKLFGVNILQ--LPVG 300
           SRFVK+ +LRAGDVVRFLRSTG DKQLYI    T    +  VHVVKLFGVNIL+  LPVG
Sbjct: 241 SRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKATSEGGVKAVHVVKLFGVNILEVPLPVG 300

Query: 301 ------KTEGVFLELQPTKKQRIIKPL 317
                 K +GV LELQP+KKQRIIK L
Sbjct: 301 RCGGEPKNQGVLLELQPSKKQRIIKAL 324

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BLAST of Clc03G11390 vs. ExPASy Swiss-Prot
Match: Q9ZWM9 (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana OX=3702 GN=RAV1 PE=1 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 7.0e-93
Identity = 201/346 (58.09%), Postives = 233/346 (67.34%), Query Frame = 0


Query: 1   MDASSIDESTAS-----DSTSISP-----VTPLLFHSSPSAT-------AEAESRKLPSS 60
           M++SS+DEST S     ++ +I+P     V  L    S S+         EAESRKLPSS
Sbjct: 1   MESSSVDESTTSTGSICETPAITPAKKSSVGNLYRMGSGSSVVLDSENGVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKPLHH 120
           ++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE +AA+AYD+A  RFR RDAVTNFK +  
Sbjct: 61  KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVKM 120

Query: 121 DDHAAVEADFLNSHSKLEIVDMLRKHTYNDELQQSKRQRG-------PTTADSASGTSPN 180
           D+    E DFLNSHSK EIVDMLRKHTYN+EL+QSKR+R               S    +
Sbjct: 121 DED---EVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVS 180

Query: 181 YSGWDSKREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGK 240
            +G+ S  E LFEK VTPSDVGKLNRLVIPK HAEK+FP+    V  KG+LLNFED+ GK
Sbjct: 181 TTGFRS-AEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGK 240

Query: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAI 300
           VWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RS G D+QLYI      G  +
Sbjct: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSGSDL 300

Query: 301 NPVHVVKLFGVNIL----------QLPVGKTEGVFLELQPTKKQRI 313
           +   V++LFGVNI              V  TE   L L  +KKQRI
Sbjct: 301 DAGRVLRLFGVNISPESSRNDVVGNKRVNDTE--MLSLVCSKKQRI 340

[Close]

BLAST of Clc03G11390 vs. ExPASy Swiss-Prot
Match: P82280 (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana OX=3702 GN=RAV2 PE=1 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.0e-91
Identity = 195/356 (54.78%), Postives = 232/356 (65.17%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSAT--------------------AEAESRKL 60
           MD+S IDE ++S S S S  T       P+A                      E ESRKL
Sbjct: 1   MDSSCIDEISSSTSESFSATTAKKLSPPPAAALRLYRMGSGGSSVVLDPENGLETESRKL 60

Query: 61  PSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKP 120
           PSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNE+ +AA++YDIAA RFRGRDAV NFK 
Sbjct: 61  PSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKN 120

Query: 121 LHHDDHAAVEADFLNSHSKLEIVDMLRKHTYNDELQQSKRQRGPTTADSASGTSPNYSGW 180
           +  D   A    FL +HSK EIVDMLRKHTY DEL+Q+ +++   + D+    + + +  
Sbjct: 121 VLEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTTQ 180

Query: 181 DSK----REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPM-GEGVVLGKGMLLNFEDMGG 240
           + K    REVLFEK VTPSDVGKLNRLVIPKQHAEK+FP+      + KG+L+NFED+ G
Sbjct: 181 NDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNG 240

Query: 241 KVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPA 300
           KVWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RSTG ++QLYI      GP 
Sbjct: 241 KVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRSGPR 300

Query: 301 INPVH-VVKLFGVNILQLPVGKTEGV--------------FLELQPTKKQRIIKPL 317
            NPV  VV+LFGV+I  +   K   V                 L+ +KKQ II  L
Sbjct: 301 ENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

[Close]

BLAST of Clc03G11390 vs. ExPASy Swiss-Prot
Match: Q9C6M5 (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana OX=3702 GN=TEM1 PE=1 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.2e-89
Identity = 200/348 (57.47%), Postives = 225/348 (64.66%), Query Frame = 0


Query: 1   MDASSIDE-STASDSTSIS-----PVTPLLFHSSPSATA--------------------- 60
           M+ S +D+ ST S+S SIS       T     SSP AT+                     
Sbjct: 1   MEYSCVDDSSTTSESLSISTTPKPTTTTEKKLSSPPATSMRLYRMGSGGSSVVLDSENGV 60

Query: 61  EAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRD 120
           E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE +AA +YDIA  RFRGRD
Sbjct: 61  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRD 120

Query: 121 AVTNFKPLHHDDHAAVEADFLNSHSKLEIVDMLRKHTYNDELQQSKRQRGPTTADSASGT 180
           AVTNFK     D    E+ FL++HSK EIVDMLRKHTY DE +QS+R +        SG 
Sbjct: 121 AVTNFK--SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRR-KFVNGDGKRSGL 180

Query: 181 SPNYSGWDS---KREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFP-------MGEGVVLG 240
                G D+    REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FP       MG      
Sbjct: 181 ETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPT 240

Query: 241 KGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQ 300
           KG+L+N ED  GKVWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RSTGPD+Q
Sbjct: 241 KGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQ 300

Query: 301 LYIHANPTPGPAINPVHVVKLFGVNILQLPVGKTEGVFLELQPTKKQR 312
           LYIH      P      VV+LFGVNI  +   K   V +E    K+ R
Sbjct: 301 LYIHWKVRSSPVQT---VVRLFGVNIFNVSNEKPNDVAVECVGKKRSR 342

[Close]

BLAST of Clc03G11390 vs. ExPASy Swiss-Prot
Match: Q9LS06 (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana OX=3702 GN=ARF14 PE=2 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.3e-88
Identity = 194/338 (57.40%), Postives = 230/338 (68.05%), Query Frame = 0


Query: 1   MDA-SSIDE-STASDS----TSISPVTPLLFHSSPSAT-----------AEAESRKLPSS 60
           MDA SS+DE ST +DS     S SP + L    S ++             EAESRKLPSS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKPLHH 120
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE +AA+AYD+AA RFRGRDAVTNFK    
Sbjct: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTF 120

Query: 121 DDHAAVEADFLNSHSKLEIVDMLRKHTYNDELQQSKRQR---GPTTADSASGTSPNYSGW 180
           ++    E +FLN+HSK EIVDMLRKHTY +EL Q KR R   G  T   A  +    +G+
Sbjct: 121 EE----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTGF 180

Query: 181 DSKREVLFEKTVTPSDVGKLNRLVIPKQHAEKNF--PMGEGVVLGKGMLLNFEDMGGKVW 240
            +  E+LFEKTVTPSDVGKLNRLVIPK  AEK+F  P+G   V  KGMLLNFED+ GKVW
Sbjct: 181 KT-AELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVW 240

Query: 241 RFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINP 300
           RFRYSYWNSSQSYVLTKGWSRFVK+  L AGD++ F RS   D++ +I      G  +  
Sbjct: 241 RFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLET 300

Query: 301 VHVVKLFGVNI---LQLPVGKTEGVFLELQPTKKQRII 314
             V++LFGV+I     + V +T  V +     KKQR++
Sbjct: 301 GRVMRLFGVDISLNAVVVVKETTEVLMSSLRCKKQRVL 333

[Close]

BLAST of Clc03G11390 vs. ExPASy Swiss-Prot
Match: Q8RZX9 (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0693400 PE=2 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.8e-85
Identity = 175/282 (62.06%), Postives = 200/282 (70.92%), Query Frame = 0


Query: 39  KLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNF 98
           KLPSS+FKGVVPQPNGRWGAQIYE+HQRVWLGTF  E DAA+AYD+AA RFRGRDAVTNF
Sbjct: 76  KLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAYDVAAQRFRGRDAVTNF 135

Query: 99  KPL-HHDDHAAVEADFLNSHSKLEIVDMLRKHTYNDELQQSKRQRGPTTADSASGTSPNY 158
           +PL   D  AA E  FL + SK E+VDMLRKHTY DEL QSKR    +T  +A+ T+   
Sbjct: 136 RPLAEADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLS 195

Query: 159 SGWDSK----------REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMGEGVVLG--KG 218
           +G  S           R+ LF+KTVTPSDVGKLNRLVIPKQHAEK+FP+      G  KG
Sbjct: 196 NGHLSSPRSPFAPAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKG 255

Query: 219 MLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLR---STGPDK 278
           +LLNFED  GKVWRFRYSYWNSSQSYVLTKGWSRFVK+  L AGDVV F R   S G D 
Sbjct: 256 VLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDG 315

Query: 279 QLYIH-----------ANPTPGPAINPVHVVKLFGVNILQLP 294
           +L+I            A+P   PA +PV  V+LFGV++L  P
Sbjct: 316 KLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAP 357

[Close]

BLAST of Clc03G11390 vs. ExPASy TrEMBL
Match: A0A5D3BWI9 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00090 PE=3 SV=1)

HSP 1 Score: 555.8 bits (1431), Expect = 1.1e-154
Identity = 290/323 (89.78%), Postives = 297/323 (91.95%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60
           M+ASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI
Sbjct: 1   MEASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60

Query: 61  YEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKP-LHHDDHAAVEADFLNSHSK 120
           YEKHQRVWLGTFNEE+DAAKAYDIAALRFRGRDAVTNFKP L+HD   A+EADFLNSHSK
Sbjct: 61  YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSHSK 120

Query: 121 LEIVDMLRKHTYNDELQQSKR-QRGPTTADSASGTSPNY----SGWDSKREVLFEKTVTP 180
           LEIVDMLRKHTYN+ELQQSKR QRG    D  SG+ P+Y    SG DSKREVLFEKTVTP
Sbjct: 121 LEIVDMLRKHTYNEELQQSKRHQRGAMAVD--SGSFPHYSGSGSGSDSKREVLFEKTVTP 180

Query: 181 SDVGKLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 240
           SDVGKLNRLVIPKQHAEKNFPM EGVV GKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT
Sbjct: 181 SDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 240

Query: 241 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINPVHVVKLFGVNILQLPV 300
           KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANP   P I PVHVVKLFGVNILQLPV
Sbjct: 241 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPINAPGIKPVHVVKLFGVNILQLPV 300

Query: 301 GKTEGVFLEL-QPTKKQRIIKPL 317
           GKTEG FLEL QPTKKQRIIKPL
Sbjct: 301 GKTEGAFLELQQPTKKQRIIKPL 321

[Close]

BLAST of Clc03G11390 vs. ExPASy TrEMBL
Match: A0A1S3CPL6 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo OX=3656 GN=LOC103503374 PE=2 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 1.5e-154
Identity = 289/323 (89.47%), Postives = 297/323 (91.95%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60
           M+ASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI
Sbjct: 1   MEASSIDESTASDSTSISPVTPLLFHSSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQI 60

Query: 61  YEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKP-LHHDDHAAVEADFLNSHSK 120
           YEKHQRVWLGTFNEE+DAAKAYDIAALRFRGRDAVTNFKP L+HD   A+EADFLNSHSK
Sbjct: 61  YEKHQRVWLGTFNEENDAAKAYDIAALRFRGRDAVTNFKPSLNHDHDHALEADFLNSHSK 120

Query: 121 LEIVDMLRKHTYNDELQQSKR-QRGPTTADSASGTSPNY----SGWDSKREVLFEKTVTP 180
           LEIVDMLRKHTYN+ELQQSKR QRG    D  SG+ P+Y    SG DSKREVLFEKTVTP
Sbjct: 121 LEIVDMLRKHTYNEELQQSKRHQRGAMAVD--SGSFPHYSGSGSGSDSKREVLFEKTVTP 180

Query: 181 SDVGKLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 240
           SDVGKLNRLVIPKQHAEKNFPM EGVV GKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT
Sbjct: 181 SDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLT 240

Query: 241 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINPVHVVKLFGVNILQLPV 300
           KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANP   P I PVHVVKLFGVNILQLPV
Sbjct: 241 KGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPINAPGIKPVHVVKLFGVNILQLPV 300

Query: 301 GKTEGVFLEL-QPTKKQRIIKPL 317
           GKTEG FLEL QPTKKQR+IKPL
Sbjct: 301 GKTEGAFLELQQPTKKQRVIKPL 321

[Close]

BLAST of Clc03G11390 vs. ExPASy TrEMBL
Match: A0A6J1E5P2 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita moschata OX=3662 GN=LOC111430186 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.6e-135
Identity = 261/327 (79.82%), Postives = 278/327 (85.02%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPS--ATAEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDES  SDSTSISPVTPLLFHSSP+     EAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 1   MDASSIDESRGSDSTSISPVTPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 60

Query: 61  QIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKPL-HHDDHAAVEADFLNSH 120
           QIYEKHQRVWLGTFN+EH AA AYDIAALRFRGRDAVTNFK L   DD  A+E +FLNSH
Sbjct: 61  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDEDDKDAMEGEFLNSH 120

Query: 121 SKLEIVDMLRKHTYNDELQQSKRQRGPTTADSASGTSPNYSGWDSKREVLFEKTVTPSDV 180
           SKLEIVDMLRKHTYN+EL+QSKRQRG   A +A+ T+ ++SG DSKREVLFEKTVTPSDV
Sbjct: 121 SKLEIVDMLRKHTYNEELEQSKRQRG---AIAAANTAVHHSGVDSKREVLFEKTVTPSDV 180

Query: 181 GKLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGW 240
           GKLNRLVIPKQHAEKNFPMGEGV  GKGMLLN EDMGGKVWRFRYSYWNSSQSYVLTKGW
Sbjct: 181 GKLNRLVIPKQHAEKNFPMGEGVGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKGW 240

Query: 241 SRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINPVHVVKLFGVNILQ--LPVG 300
           SRFVK+ +LRAGDVVRFLRSTG DKQLYI    T    +  VHVVKLFGVNIL+  LPVG
Sbjct: 241 SRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKATSEGGVKAVHVVKLFGVNILEVPLPVG 300

Query: 301 ------KTEGVFLELQPTKKQRIIKPL 317
                 K +GV LELQP+KKQRIIK L
Sbjct: 301 RCGGEPKNQGVLLELQPSKKQRIIKAL 324

[Close]

BLAST of Clc03G11390 vs. ExPASy TrEMBL
Match: A0A6J1IG08 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita maxima OX=3661 GN=LOC111472990 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 6.5e-134
Identity = 258/327 (78.90%), Postives = 277/327 (84.71%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPS--ATAEAESRKLPSSRFKGVVPQPNGRWGA 60
           MDASSIDES+ SDSTSISP+TPLLFHSSP+     EAESRKLPSSRFKGVVPQPNGRWGA
Sbjct: 26  MDASSIDESSGSDSTSISPITPLLFHSSPAPGMPHEAESRKLPSSRFKGVVPQPNGRWGA 85

Query: 61  QIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKPL-HHDDHAAVEADFLNSH 120
           QIYEKHQRVWLGTFN+EH AA AYDIAALRFRGRDAVTNFK L   DD+ A+E +FLNSH
Sbjct: 86  QIYEKHQRVWLGTFNQEHHAANAYDIAALRFRGRDAVTNFKSLDDDDDNDAMEGEFLNSH 145

Query: 121 SKLEIVDMLRKHTYNDELQQSKRQRGPTTADSASGTSPNYSGWDSKREVLFEKTVTPSDV 180
           SKLEIVDMLRKHTYN+ELQQSKRQRG   A +A+ T  ++SG DSKREVLFEKTVTPSDV
Sbjct: 146 SKLEIVDMLRKHTYNEELQQSKRQRG---AIAAANTPVHHSGVDSKREVLFEKTVTPSDV 205

Query: 181 GKLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGW 240
           GKLNRLVIPKQHAEKNFP GEG+  GKGMLLN EDMGGKVWRFRYSYWNSSQSYVLTKGW
Sbjct: 206 GKLNRLVIPKQHAEKNFPTGEGLGSGKGMLLNLEDMGGKVWRFRYSYWNSSQSYVLTKGW 265

Query: 241 SRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINPVHVVKLFGVNILQ--LPVG 300
           SRFVK+ +LRAGDVVRFLRSTG DKQLYI         +  VHVVKLFGVNIL+  LPVG
Sbjct: 266 SRFVKEKSLRAGDVVRFLRSTGADKQLYIDGKAISEGGVKAVHVVKLFGVNILEVPLPVG 325

Query: 301 ------KTEGVFLELQPTKKQRIIKPL 317
                 K +GV LELQP+KKQRIIK L
Sbjct: 326 RCGGEPKNQGVLLELQPSKKQRIIKAL 349

[Close]

BLAST of Clc03G11390 vs. ExPASy TrEMBL
Match: A0A6J1EPB7 (AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita moschata OX=3662 GN=LOC111436555 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.9e-125
Identity = 245/325 (75.38%), Postives = 265/325 (81.54%), Query Frame = 0


Query: 4   SSIDESTASDSTSISPVTPLLFH--SSPSATAEAESRKLPSSRFKGVVPQPNGRWGAQIY 63
           SS+D+S ASDSTS+SPVTPLLFH  SSP    +AESRKLPSSRFKGVVPQPNGRWGAQIY
Sbjct: 5   SSLDDSAASDSTSVSPVTPLLFHSSSSPGVPHDAESRKLPSSRFKGVVPQPNGRWGAQIY 64

Query: 64  EKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKP-LHHDDHAAVEADFLNSHSKL 123
           EKHQRVWLGTFN EH AAKAYDIAALRFRGRDAVTNFKP       AA EADFLNSHSKL
Sbjct: 65  EKHQRVWLGTFNHEHQAAKAYDIAALRFRGRDAVTNFKPGAFSSVDAAFEADFLNSHSKL 124

Query: 124 EIVDMLRKHTYNDELQQSKRQRGPTTADSASGTSPNYS----GWDSKREVLFEKTVTPSD 183
           EIVDMLRKHTYNDELQQSKR  G TT  + +  +  +S      +S REVLFEKTVTPSD
Sbjct: 125 EIVDMLRKHTYNDELQQSKRYGGGTTTTTTTAAAAAHSLQNAASESDREVLFEKTVTPSD 184

Query: 184 VGKLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKG 243
           VGKLNRLVIPKQHAEKNFP+GEG+   KG+LLNFEDMGGK+WRFRYSYWNSSQSYVLTKG
Sbjct: 185 VGKLNRLVIPKQHAEKNFPLGEGMGSAKGVLLNFEDMGGKLWRFRYSYWNSSQSYVLTKG 244

Query: 244 WSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINPVHVVKLFGVNILQLPVG- 303
           WSRFVK+ TLRAGDVVRFLRSTGPDK+LYI         + PV VVKLFGVNIL++PVG 
Sbjct: 245 WSRFVKEKTLRAGDVVRFLRSTGPDKKLYIDGR---AGGVKPVQVVKLFGVNILEVPVGW 304

Query: 304 ----KTEGVFLELQPTKKQRIIKPL 317
                 EG+  EL+ TKKQRIIK L
Sbjct: 305 CGKRDREGL-SELERTKKQRIIKAL 325

[Close]

BLAST of Clc03G11390 vs. TAIR 10
Match: AT1G13260.1 (related to ABI3/VP1 1 )

HSP 1 Score: 342.0 bits (876), Expect = 5.0e-94
Identity = 201/346 (58.09%), Postives = 233/346 (67.34%), Query Frame = 0


Query: 1   MDASSIDESTAS-----DSTSISP-----VTPLLFHSSPSAT-------AEAESRKLPSS 60
           M++SS+DEST S     ++ +I+P     V  L    S S+         EAESRKLPSS
Sbjct: 1   MESSSVDESTTSTGSICETPAITPAKKSSVGNLYRMGSGSSVVLDSENGVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKPLHH 120
           ++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE +AA+AYD+A  RFR RDAVTNFK +  
Sbjct: 61  KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDVKM 120

Query: 121 DDHAAVEADFLNSHSKLEIVDMLRKHTYNDELQQSKRQRG-------PTTADSASGTSPN 180
           D+    E DFLNSHSK EIVDMLRKHTYN+EL+QSKR+R               S    +
Sbjct: 121 DED---EVDFLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVS 180

Query: 181 YSGWDSKREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMGEGVVLGKGMLLNFEDMGGK 240
            +G+ S  E LFEK VTPSDVGKLNRLVIPK HAEK+FP+    V  KG+LLNFED+ GK
Sbjct: 181 TTGFRS-AEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGK 240

Query: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAI 300
           VWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RS G D+QLYI      G  +
Sbjct: 241 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSGSDL 300

Query: 301 NPVHVVKLFGVNIL----------QLPVGKTEGVFLELQPTKKQRI 313
           +   V++LFGVNI              V  TE   L L  +KKQRI
Sbjct: 301 DAGRVLRLFGVNISPESSRNDVVGNKRVNDTE--MLSLVCSKKQRI 340

[Close]

BLAST of Clc03G11390 vs. TAIR 10
Match: AT1G68840.1 (related to ABI3/VP1 2 )

HSP 1 Score: 338.2 bits (866), Expect = 7.2e-93
Identity = 195/356 (54.78%), Postives = 232/356 (65.17%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSAT--------------------AEAESRKL 60
           MD+S IDE ++S S S S  T       P+A                      E ESRKL
Sbjct: 1   MDSSCIDEISSSTSESFSATTAKKLSPPPAAALRLYRMGSGGSSVVLDPENGLETESRKL 60

Query: 61  PSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKP 120
           PSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNE+ +AA++YDIAA RFRGRDAV NFK 
Sbjct: 61  PSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKN 120

Query: 121 LHHDDHAAVEADFLNSHSKLEIVDMLRKHTYNDELQQSKRQRGPTTADSASGTSPNYSGW 180
           +  D   A    FL +HSK EIVDMLRKHTY DEL+Q+ +++   + D+    + + +  
Sbjct: 121 VLEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTTQ 180

Query: 181 DSK----REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPM-GEGVVLGKGMLLNFEDMGG 240
           + K    REVLFEK VTPSDVGKLNRLVIPKQHAEK+FP+      + KG+L+NFED+ G
Sbjct: 181 NDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNG 240

Query: 241 KVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPA 300
           KVWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RSTG ++QLYI      GP 
Sbjct: 241 KVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRSGPR 300

Query: 301 INPVH-VVKLFGVNILQLPVGKTEGV--------------FLELQPTKKQRIIKPL 317
            NPV  VV+LFGV+I  +   K   V                 L+ +KKQ II  L
Sbjct: 301 ENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

[Close]

BLAST of Clc03G11390 vs. TAIR 10
Match: AT1G68840.2 (related to ABI3/VP1 2 )

HSP 1 Score: 338.2 bits (866), Expect = 7.2e-93
Identity = 195/356 (54.78%), Postives = 232/356 (65.17%), Query Frame = 0


Query: 1   MDASSIDESTASDSTSISPVTPLLFHSSPSAT--------------------AEAESRKL 60
           MD+S IDE ++S S S S  T       P+A                      E ESRKL
Sbjct: 1   MDSSCIDEISSSTSESFSATTAKKLSPPPAAALRLYRMGSGGSSVVLDPENGLETESRKL 60

Query: 61  PSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKP 120
           PSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNE+ +AA++YDIAA RFRGRDAV NFK 
Sbjct: 61  PSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKN 120

Query: 121 LHHDDHAAVEADFLNSHSKLEIVDMLRKHTYNDELQQSKRQRGPTTADSASGTSPNYSGW 180
           +  D   A    FL +HSK EIVDMLRKHTY DEL+Q+ +++   + D+    + + +  
Sbjct: 121 VLEDGDLA----FLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKRNGSSTTQ 180

Query: 181 DSK----REVLFEKTVTPSDVGKLNRLVIPKQHAEKNFPM-GEGVVLGKGMLLNFEDMGG 240
           + K    REVLFEK VTPSDVGKLNRLVIPKQHAEK+FP+      + KG+L+NFED+ G
Sbjct: 181 NDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNG 240

Query: 241 KVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPA 300
           KVWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RSTG ++QLYI      GP 
Sbjct: 241 KVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRSGPR 300

Query: 301 INPVH-VVKLFGVNILQLPVGKTEGV--------------FLELQPTKKQRIIKPL 317
            NPV  VV+LFGV+I  +   K   V                 L+ +KKQ II  L
Sbjct: 301 ENPVQVVVRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFALRCSKKQAIINAL 352

[Close]

BLAST of Clc03G11390 vs. TAIR 10
Match: AT1G25560.1 (AP2/B3 transcription factor family protein )

HSP 1 Score: 331.3 bits (848), Expect = 8.8e-91
Identity = 200/348 (57.47%), Postives = 225/348 (64.66%), Query Frame = 0


Query: 1   MDASSIDE-STASDSTSIS-----PVTPLLFHSSPSATA--------------------- 60
           M+ S +D+ ST S+S SIS       T     SSP AT+                     
Sbjct: 1   MEYSCVDDSSTTSESLSISTTPKPTTTTEKKLSSPPATSMRLYRMGSGGSSVVLDSENGV 60

Query: 61  EAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRD 120
           E ESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE +AA +YDIA  RFRGRD
Sbjct: 61  ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRD 120

Query: 121 AVTNFKPLHHDDHAAVEADFLNSHSKLEIVDMLRKHTYNDELQQSKRQRGPTTADSASGT 180
           AVTNFK     D    E+ FL++HSK EIVDMLRKHTY DE +QS+R +        SG 
Sbjct: 121 AVTNFK--SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRR-KFVNGDGKRSGL 180

Query: 181 SPNYSGWDS---KREVLFEKTVTPSDVGKLNRLVIPKQHAEKNFP-------MGEGVVLG 240
                G D+    REVLFEKTVTPSDVGKLNRLVIPKQHAEK+FP       MG      
Sbjct: 181 ETATYGNDAVLRAREVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPT 240

Query: 241 KGMLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQ 300
           KG+L+N ED  GKVWRFRYSYWNSSQSYVLTKGWSRFVK+  LRAGDVV F RSTGPD+Q
Sbjct: 241 KGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQ 300

Query: 301 LYIHANPTPGPAINPVHVVKLFGVNILQLPVGKTEGVFLELQPTKKQR 312
           LYIH      P      VV+LFGVNI  +   K   V +E    K+ R
Sbjct: 301 LYIHWKVRSSPVQT---VVRLFGVNIFNVSNEKPNDVAVECVGKKRSR 342

[Close]

BLAST of Clc03G11390 vs. TAIR 10
Match: AT3G25730.1 (ethylene response DNA binding factor 3 )

HSP 1 Score: 327.0 bits (837), Expect = 1.7e-89
Identity = 194/338 (57.40%), Postives = 230/338 (68.05%), Query Frame = 0


Query: 1   MDA-SSIDE-STASDS----TSISPVTPLLFHSSPSAT-----------AEAESRKLPSS 60
           MDA SS+DE ST +DS     S SP + L    S ++             EAESRKLPSS
Sbjct: 1   MDAMSSVDESSTTTDSIPARKSSSPASLLYRMGSGTSVVLDSENGVEVEVEAESRKLPSS 60

Query: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEHDAAKAYDIAALRFRGRDAVTNFKPLHH 120
           RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE +AA+AYD+AA RFRGRDAVTNFK    
Sbjct: 61  RFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKDTTF 120

Query: 121 DDHAAVEADFLNSHSKLEIVDMLRKHTYNDELQQSKRQR---GPTTADSASGTSPNYSGW 180
           ++    E +FLN+HSK EIVDMLRKHTY +EL Q KR R   G  T   A  +    +G+
Sbjct: 121 EE----EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRNRDGNGKETTAFALASMVVMTGF 180

Query: 181 DSKREVLFEKTVTPSDVGKLNRLVIPKQHAEKNF--PMGEGVVLGKGMLLNFEDMGGKVW 240
            +  E+LFEKTVTPSDVGKLNRLVIPK  AEK+F  P+G   V  KGMLLNFED+ GKVW
Sbjct: 181 KT-AELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVW 240

Query: 241 RFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYIHANPTPGPAINP 300
           RFRYSYWNSSQSYVLTKGWSRFVK+  L AGD++ F RS   D++ +I      G  +  
Sbjct: 241 RFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSGLDLET 300

Query: 301 VHVVKLFGVNI---LQLPVGKTEGVFLELQPTKKQRII 314
             V++LFGV+I     + V +T  V +     KKQR++
Sbjct: 301 GRVMRLFGVDISLNAVVVVKETTEVLMSSLRCKKQRVL 333

The following BLAST results are available for this feature:

BLAST of Clc03G11390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906611.1	7.0e-167	93.48	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Benincasa hispi...	[more]
XP_004151060.1	3.3e-156	90.91	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucumis sativus...	[more]
KAA0066636.1	2.3e-154	89.78	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucumis melo va...	[more]
XP_008465773.1	3.1e-154	89.47	PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucu...	[more]
XP_022922118.1	5.4e-135	79.82	AP2/ERF and B3 domain-containing transcription factor RAV1-like [Cucurbita mosch...	[more]

BLAST of Clc03G11390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZWM9	7.0e-93	58.09	AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thalia...	[more]
P82280	1.0e-91	54.78	AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis tha...	[more]
Q9C6M5	1.2e-89	57.47	AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis tha...	[more]
Q9LS06	2.3e-88	57.40	AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thali...	[more]
Q8RZX9	1.8e-85	62.06	AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. jap...	[more]

BLAST of Clc03G11390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BWI9	1.1e-154	89.78	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo ...	[more]
A0A1S3CPL6	1.5e-154	89.47	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucumis melo ...	[more]
A0A6J1E5P2	2.6e-135	79.82	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita mos...	[more]
A0A6J1IG08	6.5e-134	78.90	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita max...	[more]
A0A6J1EPB7	1.9e-125	75.38	AP2/ERF and B3 domain-containing transcription factor RAV1-like OS=Cucurbita mos...	[more]

BLAST of Clc03G11390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13260.1	5.0e-94	58.09	related to ABI3/VP1 1	[more]
AT1G68840.1	7.2e-93	54.78	related to ABI3/VP1 2	[more]
AT1G68840.2	7.2e-93	54.78	related to ABI3/VP1 2	[more]
AT1G25560.1	8.8e-91	57.47	AP2/B3 transcription factor family protein	[more]
AT3G25730.1	1.7e-89	57.40	ethylene response DNA binding factor 3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 44..105 e-value: 2.9E-29 score: 113.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 43..91 e-value: 7.6E-8 score: 32.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 44..99 score: 19.95434
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 43..98 e-value: 2.30619E-26 score: 96.957
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 168..270 e-value: 2.0E-24 score: 97.2
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 168..266 e-value: 1.5E-27 score: 95.4
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 168..272 score: 14.057025
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 167..267 e-value: 1.33257E-29 score: 106.643
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 158..274 e-value: 2.6E-43 score: 148.5
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 166..266
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 43..100 e-value: 1.5E-20 score: 75.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..158
None	No IPR available	PANTHER	PTHR31140:SF1	AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR TEM1	coord: 28..295
IPR044800	B3 domain-containing transcription factor LEC2-like	PANTHER	PTHR31140	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	coord: 28..295
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 43..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G11390.1	Clc03G11390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity