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Clc03G11360 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAAGACGCCGAAGTCCCCATAATCCTTGGGAAACCATTCTTGGCCGCCAGAAGGGCCCTTATCAATGTGCAAGAGGGAAAACTCACATTCCGCCTTAACAATGAGGAGGAAACATTAGACATCTATGAAACCCTTAAGCATCCGGATGTGGAAAGGTATGAGCATCATGAGCCAAGCATAAAGGTAACATCGCCTCTCTCTTCTAGTAAGAACTCTATGGATGATGAGCCTCCTTTGAATGGTAAGACTAATGGCATGCTTAATGTTAAATTAGAAAATTCTATGAAGCATGTTTCTAGTTATGATAACTCTCCTAGTTCTTCTTGCATGCCTCCAAAACCTATAATGAACTATCAACAAATTATGGAGAAGCATGTTAAAAATGAAGTGGTGAGTCCGGTAAAATCTAAGCATGATGATTCTTTAACGATACTTGACTACATTAGAAAAGATGATATTCAACTTAATGATTTGTTGACTAACTCACTAAATGCTAATTAATATATTTGTGAGTGTCAAATACTAAACGTTCAAGGTGATCCAATGCATGGAAGGAAGAAACCACCTTGGGATCTGCCGTGACTCGCGAGCCTCGTCTAGCTAGAAGATGTTAAACCAAGCGCTTGTTGGGAGACAACCCAATTTTATTGCTTTATTTAGTTTGCTTTTTTTTTTTTTTCAATAAATCTTGGAGTCACTCATATGCTTTATCTCTTAAGATCATGGTTTATCACACAAAGTACACCTTACATCAAGCCTATTTGGTGGCTTCCCGCTTGCTCCTAGGCTTGTTTTTTCTTTGTTAGATGCTCTTATGCATTGGGGACAATGCATGATTCTAAGTTTGGGGTGGGAGATGTCACTCATACTTTTGTGTGTTTTCTTATCCTGTTATGAATGTTAGTGAAGATTTTAATGATCATATGCATGTTAATTTTGAATTTTTTTTTTGAAAATTTTGGAGCTTTTAAAGCTATTGGGAATGTTGTTTATGGTTGTGTGCCTTGATGTTGATTGCCCATGATGAGATTTGAATTTGCATGATAGATGATTTATTGTGGAAATAGAATAGCATTATCTTGAGTTAAATTCATTTAAGTCCCTCTTAAAATCTCTCATATTCTTGAGCACGTAGCCACTTTAATTCAGAATCTTTAACTGAAAAAAGATTAAGTTGGGTTTATTTGGTTCACTCTGAAGGGCCCCATCGGTTAGAGAGTGGAAATGCATGATAGTTTGTAATCTTAGACTAAGGAAAAAGAAAAGAGTATATATGCCTTTGAGAAAAAGAAAAAAAAAAGTGTACAAAAAAATGTATGAGCTTTATTTGCCTATCTTTTTAAATGTTAAACTTGTAATGAGTTTGCATGGATAGGGGTAAAAAGAGTTGCCTTTGCTGTGATTAGTAAGGATGCCTGAGAATTGACTAGGTACGAGTCCCCTACAGTGAATGTGTGAAAGCTAGTGCCTCTAGGTAAAAGAATGTAAGTTTAGGGCCCATGAAAAAGAATATGATTGAAAGGCATCTTAGTGAACATATTACTCACTTGAAATGTATGAAAGCTTGAAGATTGGTGCATGAACTAGAGTAGGGGAAAACTAAAGAAACTCTCTTAAGTCCTAATTTGAGTTCTAGTATTTTAAATTGAAGGAGGCTTGCACACACACACATGGGAGATAGCAAGATTTGACCTTGAATGATTATAACAATATAGATATGCTTGCATGTTTCTACTTAAGCTCTAAATGCTATTCTTTTAGAAATGAGTCAATTGCACACTTCTTCATCTAAACTTCCTGTTATTTGATTTTATTCTTTGCTCGGGACTAGCAAATCTCTAAGTTTGGGGTGGTGAAAAGCGCTTGAAAAGTGCTTTCTATTCTCTCAAATTAGGGGAGTTTATATTAGATCTCACTTGTTTGCTAGTGGTTTTCAAGTTAAAATGAGGAAAATTAGAAGAAAAGACCAAAAGATCAAAACCAAGCAAGAATACAGTGAAACCAAGAAGAAAAACTGAATAGGGCAAAAATGGGGGCAACGCCACAACGCTAAAACCCGACAGCAGGGTCTGTGCAACACAATTGCAGCGCTGCGACGCTCTCTTTCCTTAAATGGTAGCGCCGCGACGCTAGTTTCCATATTTGAAAAAAATGTATTTTTGGAAAGTTTTCTTGGGGGAAATACTCTATAAATTTGGGGGTTTCCAGTAGCCCTAATCATCATTCAGGCACGAAATTACAGACTAAAAGAGCCACAAGAAGGAGAGAATTGAGTGAGAGTTCATAAAAGAGTTCAAAGAGTGAGTTAGTTGCAAGGAGAAGGAAAAGAGTTTGAGATAGTCGTGGTGCCATTCGAATTCTGACGTGAGAGCCAAGGAGATCATGATGATGCTACCTCAATCAAGAGCCTCTTTTCAGTAGAGTTTTCCTTTCTTTACACTCTTTCTTTGTTTATTTTGTTTAAACATGTTGCTTCAAGCTATGAGTGGCTAAACTCTTTAGTTTTAGGGTTTTGATGAATTTTTTTATGAATTCATGTTGATATTGTAGACTTTCATGGTTTTGTTGGAATGATTATGCTTTTCATTGTTATTGTGTTTAATTCTTGTGGATTGGCCATCTTCACATGTTAGGTTAAATGTATGATTAAGAGATTGTATGTTTAACTTGATCCATAAAGATGAATTGTTGTTAATCTATCATGAGAGTATTTAGGTTGACAATAAAAGTTGCTAAAGACTTCTGAATGCCATGTAATTTGTATTGGTTTCAAGAGATTAGTAATCAATCGAGTTGCATGAGAAAGAGTTGTTTTTGAGAGAAAATAACTTGGACTTAAGTTTCTAGACTTAGGCATATGAATTGCAATAAAATCCATGAAATCTATAATATTGCATGATGAAATAAACAAGGATTCATTACCCTAGAACTCTCTTTGACTCTTGTGTTTCTCACTTTATTACTTTCTTTATTTGGTTTATATTTTCCTTAATTCATAATATTAATTCCAATCCTCAAATAAAATTGATTCAACTCTAGAATAGCTAAGTAACTTAAACCTTCACAATTAGATCTCCAGTGGAACAATATTCGGACTTCACCGTCTTATATTATAACTTGACCCGTACACTTGCGGTTAACACTTAAAGTGCGCATCAGTGAGTACAACGTAAGTTCTACTTTTAATGTGGTTGATTTGACACCTTTCAATGTAGGGAATGAAGACCTTGATTTGAGGATAAATCCTTTTAAAGAAAGGGGGAATGATGAAAATTCAACCATTGAATCATTGAATGTACTAGAGGGAGCAATTACAAGAAGCAAGGTAAAGAAGATTCAAGAGGCATTCACAGTACTATCTTTAAAAGCTAGAAAATTCACGAGAAGCGACAAATAATTTGAGCCGAATTTATATATAATGTTAGTTCATTGAGTCAAGAAGAGAATGACATGAAGATGGCATGGGAAATGTCTTGTAGTTTGGAAGATGGACAAAAAAAGTGTGCAGTAAAAATGGGGGGGTTTTTGTTTTAATGAGTGCGAGAATGTAAATTGCGGAATTTAAAGTGCAAGAAAATAAAAATGCGAGAAAAATAAAAGAAAATGCCTAGCTCAGGACTTAGGATCCACCCGATGTTCGATTTATCATAGAGATTACTTTGGATTATCTCTCGATTTAATGTGTTTAGCCAACTTGCCCGAGAAGCTTAGAACAAGGGCGCTAATTACTAATTAGTTACTTTAATTAAAACAATTGTTTAGTTGTTTGGGTTCGATAGCGTCCATAACAAACAAACAATCGCACTAAGTTCCCAGGGTTCCACTAAGACGACTAGTAACCTAGAAAAGCTAGAGTTACAGATCGATTTCGTTCTTGAAATAGTTAATCATGCAATGTTTGCGATTAGATTATTTCATCAACCTAATTTAACAACACAAGCATGCTTTAACCTTTGCCCATTTTAGATTAAAAACACATTAGAGAATTCCTATCTCTAGCAATCAAAGACTGAATGATGGTTGTCCATTTTAGATTAAAAACACATTAGAGAAATATATATTAAGAACAAAAATCCTCAAAATCAATACACGGGTTTCACCTAAATCCAATCTAGCAACTCACCTTAGCCACAAGATCAGTCCAAGATGAGTTTTACAACCATGAAAATACACCCAAAGATGAAGATATATAGAGGGAAGGAGAAAAAGAGAAGAGGAAATTTGGATTGGGGGCTGAAAGCTCAAACTCTCACCCTAATTTGGCAAAATTTCTTTTTATAAAAAGAGTAGAGCGTTGCTACGCTCCATTAGAGTGTCGCTACGCTTTGGTAGAAGTGGGAGCGCCTACCTAAAGTGTAGCGGCATTACGCGCTGCGCTTAGGCATGCATTCGCTTCGTTGCTCGTTCGTCAATTTCCGGAGCACAGTTGTGCTCTAAGGGAGCATCTCTGCGGTCTCACCATTTTTGCTCTCGGCCTTTGGATGTAGAGCACAGCGCAGCTACACTCTGCGCTGCGCTGCTCCAGGGGCATTTTCGTAATTTTTATGTTCTTGAGCTCTAGGTGCTCGATTTCACTTCCGATAGCTCCAAATCAACCACGAATGACCTGTAATGCTTTGTTATGCATGATTTGCTCAAATTTTTATAAAATAGCATAATAAACACATAAAATCCACAAACAAGCCGAAATTAAGCTAGGGAAAATAGCACTTTTATGGTGCTATCACTCATCTCAGTCCTGAGTGAGTTATGAACTCCTGTCTATGAGGATAGTCTTTTGATTTGTATGGGTGAGGGTGACCCGTGTCGCTGACTCAATAAGCCTACTATTTTGGGAACTTGTTCAAGTAGGGAGCTGAGAACATAGCTATATAAGATGGAATTCTGTCCTTCTCGTCTTTAGGTAAGTAGATGAATTGCTCCCTTAAGGGCTGATTTTGGGTCTTGAACAATGAAGCTCCTCTTTTCACTTGCCTGAAAGGGATTTAGTTTATAGTTGGACGATAAATTGATTGTTCATTAAAGGGATCAATGGTATTTAAGGAGTAAGAGGTAATTACAGGGGTAAAACGGTAATTTGACCCAGCTATAATTACGAGCAATTCGTGAAAGGTTGACTTACTAGTAATGGTTATATCCATGGACACTAAAATATATCTACAATGTGAATAGTGCACTATGGATATTTAGTGGAGTGACCCACAATTAATAAATGTTGATTAATTTAATTAAAGAGTTTAATTAACTAATCTCGAATGATGGGAGCTTCTAATCTGTAGGTCCATTAGGTCCCCCTGTTAGCTTACTCAAGGTAAAATAAAAATTAATTTGTTTTGGATAAATTTGAATTATTCAAATTAAATAAGGGAATGTCCATTAATCATATGAGATATAATTAATATAATGTATGGAGATACATTATATTATAAAGTTAATTTTGAATCTAATTCAAAATTAACTTTATAATATGAGAGAATAATATATTTGAATAAGATTCACATATTAAATAATATGAATGAGATCATATTAAAACTATAGGCTATTAGAGAGAAATACATTTGAATATGATTCAAATGTAATATTAATTAAATATATGATATTTAATTATGATTAATTAATAATGATTTAATACATTATATTTAATTAATTAAGATTGATATGTTATATTAATTTATTTTATCTCACACAATGAGGAAAATTCTTATAAATAGAAAAAATATCAAATTATCTATAAATATAGCAAAATTTTACTTTCTATTTATAATAGATCGCGAAAGACCTAAATAGACATCTACCCGTGTCTATCTAGTAAAGTGTTAGATGTCTATCTGGGTCTAGGGATGGCAAAAAAACCCGCAAGGCCTCGACCTGGTCGGGTTGGGGAATCCCTGGTTTGACTGAGGACGAGGGTCAAACTGGGGACATTCCATGGGTACCCGTCTGGGGACGGGGCAGAGACAGGGTGGGTACCCTCGCCCGGCCTCGACCCTGCCCCGTTTAA ATGGAGGAAGACGCCGAAGTCCCCATAATCCTTGGGAAACCATTCTTGGCCGCCAGAAGGGCCCTTATCAATGTGCAAGAGGGAAAACTCACATTCCGCCTTAACAATGAGGAGGAAACATTAGACATCTATGAAACCCTTAAGCATCCGGATGTGGAAAGGTATGAGCATCATGAGCCAAGCATAAAGGTAACATCGCCTCTCTCTTCTAGTAAGAACTCTATGGATGATGAGCCTCCTTTGAATGGTAAGACTAATGGCATGCTTAATGTTAAATTAGAAAATTCTATGAAGCATGTTTCTAGTTATGATAACTCTCCTAGTTCTTCTTGCATGCCTCCAAAACCTATAATGAACTATCAACAAATTATGGAGAAGCATGTTAAAAATGAAGTGGTGAGTCCGGCATGCATTCGCTTCGTTGCTCGTTCGTCAATTTCCGGAGCACAGTTGTGCTCTAAGGGAGCATCTCTGCGGTCTCACCATTTTTGCTCTCGGCCTTTGGATGTAGAGCACAGCGCAGCTACACTCTGCGCTGCGCTGCTCCAGGGGCATTTTCGTCCATTAGGTCCCCCTGTTAGCTTACTCAAGGCCTCGACCTGGTCGGGTTGGGGAATCCCTGGTTTGACTGAGGACGAGGGTCAAACTGGGGACATTCCATGGGTACCCGTCTGGGGACGGGGCAGAGACAGGGTGGGTACCCTCGCCCGGCCTCGACCCTGCCCCGTTTAA ATGGAGGAAGACGCCGAAGTCCCCATAATCCTTGGGAAACCATTCTTGGCCGCCAGAAGGGCCCTTATCAATGTGCAAGAGGGAAAACTCACATTCCGCCTTAACAATGAGGAGGAAACATTAGACATCTATGAAACCCTTAAGCATCCGGATGTGGAAAGGTATGAGCATCATGAGCCAAGCATAAAGGTAACATCGCCTCTCTCTTCTAGTAAGAACTCTATGGATGATGAGCCTCCTTTGAATGGTAAGACTAATGGCATGCTTAATGTTAAATTAGAAAATTCTATGAAGCATGTTTCTAGTTATGATAACTCTCCTAGTTCTTCTTGCATGCCTCCAAAACCTATAATGAACTATCAACAAATTATGGAGAAGCATGTTAAAAATGAAGTGGTGAGTCCGGCATGCATTCGCTTCGTTGCTCGTTCGTCAATTTCCGGAGCACAGTTGTGCTCTAAGGGAGCATCTCTGCGGTCTCACCATTTTTGCTCTCGGCCTTTGGATGTAGAGCACAGCGCAGCTACACTCTGCGCTGCGCTGCTCCAGGGGCATTTTCGTCCATTAGGTCCCCCTGTTAGCTTACTCAAGGCCTCGACCTGGTCGGGTTGGGGAATCCCTGGTTTGACTGAGGACGAGGGTCAAACTGGGGACATTCCATGGGTACCCGTCTGGGGACGGGGCAGAGACAGGGTGGGTACCCTCGCCCGGCCTCGACCCTGCCCCGTTTAA MEEDAEVPIILGKPFLAARRALINVQEGKLTFRLNNEEETLDIYETLKHPDVERYEHHEPSIKVTSPLSSSKNSMDDEPPLNGKTNGMLNVKLENSMKHVSSYDNSPSSSCMPPKPIMNYQQIMEKHVKNEVVSPACIRFVARSSISGAQLCSKGASLRSHHFCSRPLDVEHSAATLCAALLQGHFRPLGPPVSLLKASTWSGWGIPGLTEDEGQTGDIPWVPVWGRGRDRVGTLARPRPCPV Homology
BLAST of Clc03G11360 vs. NCBI nr
Match: WP_217833145.1 (retropepsin-like domain-containing protein [Synechococcus sp. PCC 7002]) HSP 1 Score: 230.7 bits (587), Expect = 1.3e-56 Identity = 116/135 (85.93%), Postives = 125/135 (92.59%), Query Frame = 0
BLAST of Clc03G11360 vs. NCBI nr
Match: XP_031278051.1 (uncharacterized protein LOC116136500 [Pistacia vera]) HSP 1 Score: 70.5 bits (171), Expect = 2.3e-08 Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 0
BLAST of Clc03G11360 vs. NCBI nr
Match: XP_023874613.1 (uncharacterized protein LOC111987139 [Quercus suber]) HSP 1 Score: 70.5 bits (171), Expect = 2.3e-08 Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of Clc03G11360 vs. NCBI nr
Match: XP_027337115.1 (uncharacterized protein LOC113850771 [Abrus precatorius]) HSP 1 Score: 70.1 bits (170), Expect = 3.0e-08 Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 0
BLAST of Clc03G11360 vs. NCBI nr
Match: XP_023903214.1 (uncharacterized protein LOC112015077 [Quercus suber]) HSP 1 Score: 70.1 bits (170), Expect = 3.0e-08 Identity = 32/51 (62.75%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of Clc03G11360 vs. ExPASy TrEMBL
Match: A0A1U7Z254 (uncharacterized protein LOC104588472 OS=Nelumbo nucifera OX=4432 GN=LOC104588472 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 9.4e-08 Identity = 29/56 (51.79%), Postives = 43/56 (76.79%), Query Frame = 0
BLAST of Clc03G11360 vs. ExPASy TrEMBL
Match: A0A1U7Z3D0 (uncharacterized protein LOC104589882 OS=Nelumbo nucifera OX=4432 GN=LOC104589882 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07 Identity = 27/54 (50.00%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of Clc03G11360 vs. ExPASy TrEMBL
Match: A0A1U7Z0I7 (uncharacterized protein LOC104589022 OS=Nelumbo nucifera OX=4432 GN=LOC104589022 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-07 Identity = 28/54 (51.85%), Postives = 44/54 (81.48%), Query Frame = 0
BLAST of Clc03G11360 vs. ExPASy TrEMBL
Match: A0A1U7ZK29 (uncharacterized protein LOC104591089 OS=Nelumbo nucifera OX=4432 GN=LOC104591089 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.6e-07 Identity = 29/56 (51.79%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of Clc03G11360 vs. ExPASy TrEMBL
Match: A0A1U7ZIJ1 (uncharacterized protein LOC104591019 OS=Nelumbo nucifera OX=4432 GN=LOC104591019 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.1e-07 Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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