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Clc03G11330 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCCAAGCACATTGAATTATAGTCAGCTAAGTGCTACATTATACGAACTTTCAAATGTCAGTTCTTCAGAGTTCAACATCATAATGAGGGTGAAATACAAGTTAGATTGTGAATGTCCTCCAGTTTGCCTCATGGATGATGGGGATGTTAGATTTCTACTCTCAGAAATGGATCATAACAGACCTCCAATATTTGTCAATTTTGAAGAGACTAATCAAGAGCAAACATTTGGAGGGAAATTTGGAGAACATGAACCCATGTTGGCATCAGGTAGCAACGATGAGCCGGATATTTTTCATCTATAGTCTCTATGGAAAACAACAACTTGAACCCATGGATAGGTAGCAAACATTATTCAGGCCAGAAGCAAGGACCTACTGAAACCATTGGTGATTCTATTATTGAGAGTGCCTCATCATCACACTCAATATCTGACTACCCGTGATGTGATGGGTGGTCCTTTTATTGATGATGATACTATTGGGAGTGCCTCACCACAATCCAATACACATTTGACTGAATGTACTAAAATGGTGGGTGGTCCTTCTTTTGGTGGTAGTACCTCACCCCATCCCAATACATATCCAACTACATGCACTAGAATGGGTGGTCCTTCTATGTTGAATGTACCTCCGTAGAATCCAATTATATGCAATGATTTTGGGCATTTCATTGGAAACACCCCTCGATGGATAGAGGCCCGGCAATAGATAGAGGCAGTAGTAGAGTGTGGTTCTTCTATGAGATAGAAAGAAGCAGGACCATCTGTGAGAACTACAAGAACAGGAGATATCATTATGCAATCGGTGCCAGCGTCAGGTGTGGATGTTGAGGTTGGTCAAATATTGTTTTTGTAAGAATGATGTGAAGATGAGATTATCCATACTAGCCATCAAGAAGAATTTTGAGATGCGAGTAAGAAAATCAAATAAAAACCTCTACAGTGTGTGATGCATCCACGAGACCTGCAAGTGGGCAATTCGTGCAGTTAGAATGGAGGGATGTGATATATTCAACATAACTAAGTATATAGTAGTGCACATGTGCTCTATTGAGGTTTTGAATCATGACCACTAGGCACACATTTGTAATTGGGCAACTCATTAAGGACAAGTTCGGAGTTGGTCGAGTCGATAAACCACGCCATACTATCAAGGATATACGAAAAAATTATGATGTGTATATCAGCTATGACAAAGCATGTTGTGTTAGAGAAACTGCTTTTTCTATTGCTAGGGGGACCTCCTGGATTCATACGCTCAGTTGCATGCGTATGGAGAAGCCTTAAAGATCGAAAACCCTGGGACCATATTTGAGATTGAACTAGAAGATTCTAAATACTTCAAGTAATTCATGGCACTGGGCCGAGTTTAAGAGGGTTCAGGAACTAGGGTTGGCAAAAAAACCCATGGGGTTGGGTCCCAAGTTGGGAAATCCTCAATTTGACCATTTTTCCACAAGGACCTTTTTTTGGGTACCCGTCTAGGGACGGGGCGGGGATGGTGAGAGTATCCTCGCCCCGACCCTGACCCCAACCCCAAATCCCCGACACCAACCCATTTAATATAATAATTAATTATATATATATAAAATATGTTATTGTTGACTCTCGTGCTCTCGCTCTCGCATCCCTCACAATCACTCTATCTCTCTTGCTCTCTCTTGAGCGCTCTCACTCTGTCTCACTCACTCTCTCGCTCTCGCTCTTACTCTCTCTCACAGTCTCGCTCTCGCTCTCTCTCACTAGCTTGCTCTAGCTCTATCTCGGGGAATGGGTCCCCACAGGGAATCCCCACCCTCGTCCCAGCCTACAAATGGAGGGGACAGGGGCGAGGATGGGGGTAAATTACCCACATGGGGCTAGGGACGAGGAACCCCCACCCGCCCCACCCCGGCCCTGTTACCAACCCTATCAAGAATTGTTGTCCTGTGATTATTGTTGATGGAACACATCTAAAGGGAAAATACAAAGGCACGATGTTGGTTGGAGTCGCCATGGATGGTAATGATCAATTGTACCCACCGGCATATGCTACAGATTTCATGTGAAAGATGGTGGATTGGACAGTATTGTTAACCTGAATATGAGTGAATGCAACTAGGCCAGTTTCAATGTTTGAAAATTCGATGCTCGCACGATATTGCTGTAGCTAGAGAGAGGAACATCAACCCATTCACTTTTTGTAGCAGATTTTACAGTGTGGATTCCCTTATTCTTGTATATGCGTAATCGATATCTCCATTGGGCCACATTTCAAAACAAAAAAAACCATCGAGGTATGTTGAGGTGAAAATCCTTCCACCATGGAAGGTTGTTCAAGTTGGTCGATGAATAGTTAATAGAATACCGTCAGCTGGAGAATGTCTTTGAGCCAAAAAGTGTGGTCAATGTGGTGGCACGGGTCACACTCGTAAGAATTGTAATGAACCCCTAAACATTCCTCATGCCAATGTACAGACACTTACACAATAGCTTCTTACATGTATTCGTTAGTATATTGTAATTGGGTCTCCATGTATACAAACCTGTTGGGCAACTACAGTATCTCGATATTGCCTCTCCGCATCGGACATCATAAGCGCGAAGATGAGCACCACCTACATTGAGGTTTGGGCATATGGAAAAGGTATTCATGCAATTACTCTTTTTTGAATAATTGTAGGTTTGGGCATATGAGACAATATCTATAATAGCCGGGAGAGTTGCAGTACGGCTTAATGACAATGTGGTGCCTTGATGTCTAAGATGCTCATGCGCCCATTCATTGGCTAACAAGCTATTACAGTGGGATGCAGAGAGGCAATATGAGATACTCTAGTTGACCAACGAGTCGTATACGTGGAGACCCAAAACGGAGAGATGATGCCTTAAGCATCAGAGAGCTCAGAAAGCTCAAAAGGTGAAGAGTCGCTCGAGGAGGACCATGTAGAGCGTGAAGTGCCCTTTGAGGAGGCAACATCCTTACAATTTGAGCATGAGGTGCCCTTCGAGGAGACGACCCATAGACATGCCGAGGAGAGGGGCAATGCTAAGGGAGGTACGCTTCCTCATGTTCTAGAGCCTATTGCCAGCACATGGAGAAATATGGTCTGA ATGGTGCCAAGCACATTGAATTATAGTCAGCTAAGTGCTACATTATACGAACTTTCAAATGTCAGTTCTTCAGAGTTCAACATCATAATGAGGGTGAAATACAAGTTAGATTGTGAATGTCCTCCAGTTTGCCTCATGGATGATGGGGATGTTAGATTTCTACTCTCAGAAATGGATCATAACAGACCTCCAATATTTGTCAATTTTGAAGAGACTAATCAAGAGCAAACATTTGGAGGGAAATTTGGAGAACATGAACCCATGTTGGCATCAGCAAACATTATTCAGGCCAGAAGCAAGGACCTACTGAAACCATTGGTGATTCTATTATTGAGAGTGCCTCATCATCACACTCAATATCTGACTACCCGTGATGTGATGGGTGGTCCTTTTATTGATGATGATACTATTGGGAGTGCCTCACCACAATCCAATACACATTTGACTGAATGTACTAAAATGGTGGGTGGTCCTTCTTTTGGTGGTAGTACCTCACCCCATCCCAATACATATCCAACTACATGCACTAGAATGGGTGGTCCTTCTATGTTGAATAAAGAAGCAGGACCATCTGTGAGAACTACAAGAACAGGAGATATCATTATGCAATCGGTGCCAGCGTCAGGTGTGGATGTTGAGGGGGACCTCCTGGATTCATACGCTCAGTTGCATGCGTATGGAGAAGCCTTAAAGATCGAAAACCCTGGGACCATATTTGAGATTGAACTAGAAGATTCTAAATACTTCAAGGAATCCCCACCCTCGTCCCAGCCTACAAATGGAGGGGACAGGGGCGAGGATGGGGTATCTCGATATTGCCTCTCCGCATCGGACATCATAAGCGCGAAGATGAGCACCACCTACATTGAGGTTTGGGCATATGGAAAAGAGAGCTCAGAAAGCTCAAAAGGTGAAGAGTCGCTCGAGGAGGACCATGTAGAGCGTGAAGTGCCCTTTGAGGAGGCAACATCCTTACAATTTGAGCATGAGGTGCCCTTCGAGGAGACGACCCATAGACATGCCGAGGAGAGGGGCAATGCTAAGGGAGGTACGCTTCCTCATGTTCTAGAGCCTATTGCCAGCACATGGAGAAATATGGTCTGA ATGGTGCCAAGCACATTGAATTATAGTCAGCTAAGTGCTACATTATACGAACTTTCAAATGTCAGTTCTTCAGAGTTCAACATCATAATGAGGGTGAAATACAAGTTAGATTGTGAATGTCCTCCAGTTTGCCTCATGGATGATGGGGATGTTAGATTTCTACTCTCAGAAATGGATCATAACAGACCTCCAATATTTGTCAATTTTGAAGAGACTAATCAAGAGCAAACATTTGGAGGGAAATTTGGAGAACATGAACCCATGTTGGCATCAGCAAACATTATTCAGGCCAGAAGCAAGGACCTACTGAAACCATTGGTGATTCTATTATTGAGAGTGCCTCATCATCACACTCAATATCTGACTACCCGTGATGTGATGGGTGGTCCTTTTATTGATGATGATACTATTGGGAGTGCCTCACCACAATCCAATACACATTTGACTGAATGTACTAAAATGGTGGGTGGTCCTTCTTTTGGTGGTAGTACCTCACCCCATCCCAATACATATCCAACTACATGCACTAGAATGGGTGGTCCTTCTATGTTGAATAAAGAAGCAGGACCATCTGTGAGAACTACAAGAACAGGAGATATCATTATGCAATCGGTGCCAGCGTCAGGTGTGGATGTTGAGGGGGACCTCCTGGATTCATACGCTCAGTTGCATGCGTATGGAGAAGCCTTAAAGATCGAAAACCCTGGGACCATATTTGAGATTGAACTAGAAGATTCTAAATACTTCAAGGAATCCCCACCCTCGTCCCAGCCTACAAATGGAGGGGACAGGGGCGAGGATGGGGTATCTCGATATTGCCTCTCCGCATCGGACATCATAAGCGCGAAGATGAGCACCACCTACATTGAGGTTTGGGCATATGGAAAAGAGAGCTCAGAAAGCTCAAAAGGTGAAGAGTCGCTCGAGGAGGACCATGTAGAGCGTGAAGTGCCCTTTGAGGAGGCAACATCCTTACAATTTGAGCATGAGGTGCCCTTCGAGGAGACGACCCATAGACATGCCGAGGAGAGGGGCAATGCTAAGGGAGGTACGCTTCCTCATGTTCTAGAGCCTATTGCCAGCACATGGAGAAATATGGTCTGA MVPSTLNYSQLSATLYELSNVSSSEFNIIMRVKYKLDCECPPVCLMDDGDVRFLLSEMDHNRPPIFVNFEETNQEQTFGGKFGEHEPMLASANIIQARSKDLLKPLVILLLRVPHHHTQYLTTRDVMGGPFIDDDTIGSASPQSNTHLTECTKMVGGPSFGGSTSPHPNTYPTTCTRMGGPSMLNKEAGPSVRTTRTGDIIMQSVPASGVDVEGDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFKESPPSSQPTNGGDRGEDGVSRYCLSASDIISAKMSTTYIEVWAYGKESSESSKGEESLEEDHVEREVPFEEATSLQFEHEVPFEETTHRHAEERGNAKGGTLPHVLEPIASTWRNMV Homology
BLAST of Clc03G11330 vs. NCBI nr
Match: XP_038904780.1 (uncharacterized protein LOC120091048 [Benincasa hispida]) HSP 1 Score: 68.2 bits (165), Expect = 1.7e-07 Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 0
BLAST of Clc03G11330 vs. NCBI nr
Match: XP_038888098.1 (uncharacterized protein LOC120078004 [Benincasa hispida]) HSP 1 Score: 65.1 bits (157), Expect = 1.5e-06 Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 0
BLAST of Clc03G11330 vs. NCBI nr
Match: XP_038891939.1 (uncharacterized protein LOC120081277 isoform X2 [Benincasa hispida]) HSP 1 Score: 64.3 bits (155), Expect = 2.5e-06 Identity = 30/75 (40.00%), Postives = 49/75 (65.33%), Query Frame = 0
BLAST of Clc03G11330 vs. NCBI nr
Match: XP_038891938.1 (uncharacterized protein LOC120081277 isoform X1 [Benincasa hispida]) HSP 1 Score: 64.3 bits (155), Expect = 2.5e-06 Identity = 30/75 (40.00%), Postives = 49/75 (65.33%), Query Frame = 0
BLAST of Clc03G11330 vs. NCBI nr
Match: XP_022153200.1 (uncharacterized protein LOC111020756 [Momordica charantia]) HSP 1 Score: 60.5 bits (145), Expect = 3.6e-05 Identity = 28/39 (71.79%), Postives = 30/39 (76.92%), Query Frame = 0
BLAST of Clc03G11330 vs. ExPASy TrEMBL
Match: A0A6J1DG46 (uncharacterized protein LOC111020756 OS=Momordica charantia OX=3673 GN=LOC111020756 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-05 Identity = 28/39 (71.79%), Postives = 30/39 (76.92%), Query Frame = 0
BLAST of Clc03G11330 vs. ExPASy TrEMBL
Match: A0A6J1BRM2 (protein FAR1-RELATED SEQUENCE 4-like OS=Momordica charantia OX=3673 GN=LOC111004779 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.0e-05 Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0
BLAST of Clc03G11330 vs. ExPASy TrEMBL
Match: A0A6J1DLL7 (protein FAR1-RELATED SEQUENCE 4-like OS=Momordica charantia OX=3673 GN=LOC111022068 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.0e-05 Identity = 27/39 (69.23%), Postives = 31/39 (79.49%), Query Frame = 0
BLAST of Clc03G11330 vs. ExPASy TrEMBL
Match: A0A6J1CBY8 (protein FAR1-RELATED SEQUENCE 4-like OS=Momordica charantia OX=3673 GN=LOC111009295 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.1e-05 Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 0
BLAST of Clc03G11330 vs. ExPASy TrEMBL
Match: A0A6J1DDQ3 (protein FAR1-RELATED SEQUENCE 4-like OS=Momordica charantia OX=3673 GN=LOC111019438 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 8.6e-05 Identity = 27/37 (72.97%), Postives = 29/37 (78.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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