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Clc03G11000 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCATCCTCGAGGCAGGGTAGTCGAAATCTGTCCACTACCTCCACCACACCTGAACCTTTCACCGTTGTTCGCCCCAACAGTCCTGAGTTGGAGGCGACATCCCCATCTTCACCACGCTCCAGGGACCTGTCTGAAGCCCAAAAGGTGGAGAGGAATGACGAAACCACTGTCTTCGGAGATATTCTAGACACGATCGATGAAGAAGACGATGACTGGTTGGACGGGTTGGTCGACCAGAGGACAAAGAACAAATCGCGTGGGTCTGTCCCTGCGATAAGGGGTCTTGAGGAATCTGACTCCGATGAAAGACTCATTGGCAAGGTATTAGCGGCGGTGGAAAAGAAGAGGTCTACCAAGGAAAAGAAAGTCAGACCAGACAGGGCCAAGGAAGAAGAAGCCGAGGAAGATGTCCTTCCGCTAAGAAGAAAAAATGAAAAAGGAAAGGACGCGGGGACATCTGAGGCTGTCGCGTCATCGGTCGCCGCATCCCCTGTTGAGTGGCTAGCAACGAAAGCGGTAGAGAAGGCTAAGAAGTTAATGGAGGACATCAAAAAGATGAAGGAAAAGACGGAGTCGTTTCTCATTGCAAAGAAGAAAAGAAAAGAGGAAATCGCGGCTGCTAAACAGTTTATTGATGAAGCCGTGAGAAAAGCCGAGTTTCTCCGTCGCATAGCAGAGGTTGCGACGGAGTTAGAAGTAGAGTGGGAAGTAAGTGATGCGGAGAAGCCACCAAAAGCTGAACGCATCAAGAAAAATATAAAAAAGATAAGGGAGGAGAAGAAGAAAGAAAAAGAGGTAGCCTTCACCAAAGAGAAGCTACCGGAGAGAAAAGAAAAAGAGGTAGCCTTCACCAAGGAGAAGCTACCGGAGAAAAAGAAGAAAAATGAGGTGGCTAAGGCACCTGGAGTAGTTATCCGGGATGTGGACGCAGGCAGAGCAAGGAGAACGCCTGCTAGTCCCGTGAAGAGGAATGAGAAAGGAAAAGAGAAATTGGTTGAGGAACCAAGGAATGAGGCAGCGAAGAGCAGAAAGAAACAGTATAGTGGGCTCTACACTGAAGTGGGATTCTTCCTAGAGCCTATTGAGCTGCCCGCCTTCATCATCCAAGGAGTCGACGCATTGGGTTGGAGACAATTCTGTGAAAGTGGCCAAGTCATCCAACCCACCGCCGTGGAGGCATTTTACGAAGGAACGATTCACCGAAAGGCACATCTGATCAAACTTGAAGATGAGGTGATTTCCTTCGAGCCTCAAGAGATCAACGCATTGTTTGATCTTTCCAACAATGCGGCGGCGGAAGGCAACAGAATAATGTCGACGCCTACAGACGCCGAATTGAATGATGCCCTCTCAATCATCGCCAAACCGGGGTCAGAGTGGAACACTTCCCCAAAGGGCATTCAATCATCGGCGCCTAACTACTTGATCGCTGAGGCCAACTTGTGGCTATATTTCATCAAGCGGTCGCTGCTTCCCACAACGCATGACGCCTCGATTTCAAGGGACCGGGCCATGGTCATCTAA ATGGCCTCATCCTCGAGGCAGGGTAGTCGAAATCTGTCCACTACCTCCACCACACCTGAACCTTTCACCGTTGTTCGCCCCAACAGTCCTGAGTTGGAGGCGACATCCCCATCTTCACCACGCTCCAGGGACCTGTCTGAAGCCCAAAAGGTGGAGAGGAATGACGAAACCACTGTCTTCGGAGATATTCTAGACACGATCGATGAAGAAGACGATGACTGGTTGGACGGGTTGGTCGACCAGAGGACAAAGAACAAATCGCGTGGGTCTGTCCCTGCGATAAGGGGTCTTGAGGAATCTGACTCCGATGAAAGACTCATTGGCAAGGTATTAGCGGCGGTGGAAAAGAAGAGGTCTACCAAGGAAAAGAAAGTCAGACCAGACAGGGCCAAGGAAGAAGAAGCCGAGGAAGATGTCCTTCCGCTAAGAAGAAAAAATGAAAAAGGAAAGGACGCGGGGACATCTGAGGCTGTCGCGTCATCGGTCGCCGCATCCCCTGTTGAGTGGCTAGCAACGAAAGCGGTAGAGAAGGCTAAGAAGTTAATGGAGGACATCAAAAAGATGAAGGAAAAGACGGAGTCGTTTCTCATTGCAAAGAAGAAAAGAAAAGAGGAAATCGCGGCTGCTAAACAGTTTATTGATGAAGCCGTGAGAAAAGCCGAGTTTCTCCGTCGCATAGCAGAGGTTGCGACGGAGTTAGAAGTAGAGTGGGAAGTAAGTGATGCGGAGAAGCCACCAAAAGCTGAACGCATCAAGAAAAATATAAAAAAGATAAGGGAGGAGAAGAAGAAAGAAAAAGAGGTAGCCTTCACCAAAGAGAAGCTACCGGAGAGAAAAGAAAAAGAGGTAGCCTTCACCAAGGAGAAGCTACCGGAGAAAAAGAAGAAAAATGAGGTGGCTAAGGCACCTGGAGTAGTTATCCGGGATGTGGACGCAGGCAGAGCAAGGAGAACGCCTGCTAGTCCCGTGAAGAGGAATGAGAAAGGAAAAGAGAAATTGGTTGAGGAACCAAGGAATGAGGCAGCGAAGAGCAGAAAGAAACAGTATAGTGGGCTCTACACTGAAGTGGGATTCTTCCTAGAGCCTATTGAGCTGCCCGCCTTCATCATCCAAGGAGTCGACGCATTGGGTTGGAGACAATTCTGTGAAAGTGGCCAAGTCATCCAACCCACCGCCGTGGAGGCATTTTACGAAGGAACGATTCACCGAAAGGCACATCTGATCAAACTTGAAGATGAGGTGATTTCCTTCGAGCCTCAAGAGATCAACGCATTGTTTGATCTTTCCAACAATGCGGCGGCGGAAGGCAACAGAATAATGTCGACGCCTACAGACGCCGAATTGAATGATGCCCTCTCAATCATCGCCAAACCGGGGTCAGAGTGGAACACTTCCCCAAAGGGCATTCAATCATCGGCGCCTAACTACTTGATCGCTGAGGCCAACTTGTGGCTATATTTCATCAAGCGGTCGCTGCTTCCCACAACGCATGACGCCTCGATTTCAAGGGACCGGGCCATGGTCATCTAA ATGGCCTCATCCTCGAGGCAGGGTAGTCGAAATCTGTCCACTACCTCCACCACACCTGAACCTTTCACCGTTGTTCGCCCCAACAGTCCTGAGTTGGAGGCGACATCCCCATCTTCACCACGCTCCAGGGACCTGTCTGAAGCCCAAAAGGTGGAGAGGAATGACGAAACCACTGTCTTCGGAGATATTCTAGACACGATCGATGAAGAAGACGATGACTGGTTGGACGGGTTGGTCGACCAGAGGACAAAGAACAAATCGCGTGGGTCTGTCCCTGCGATAAGGGGTCTTGAGGAATCTGACTCCGATGAAAGACTCATTGGCAAGGTATTAGCGGCGGTGGAAAAGAAGAGGTCTACCAAGGAAAAGAAAGTCAGACCAGACAGGGCCAAGGAAGAAGAAGCCGAGGAAGATGTCCTTCCGCTAAGAAGAAAAAATGAAAAAGGAAAGGACGCGGGGACATCTGAGGCTGTCGCGTCATCGGTCGCCGCATCCCCTGTTGAGTGGCTAGCAACGAAAGCGGTAGAGAAGGCTAAGAAGTTAATGGAGGACATCAAAAAGATGAAGGAAAAGACGGAGTCGTTTCTCATTGCAAAGAAGAAAAGAAAAGAGGAAATCGCGGCTGCTAAACAGTTTATTGATGAAGCCGTGAGAAAAGCCGAGTTTCTCCGTCGCATAGCAGAGGTTGCGACGGAGTTAGAAGTAGAGTGGGAAGTAAGTGATGCGGAGAAGCCACCAAAAGCTGAACGCATCAAGAAAAATATAAAAAAGATAAGGGAGGAGAAGAAGAAAGAAAAAGAGGTAGCCTTCACCAAAGAGAAGCTACCGGAGAGAAAAGAAAAAGAGGTAGCCTTCACCAAGGAGAAGCTACCGGAGAAAAAGAAGAAAAATGAGGTGGCTAAGGCACCTGGAGTAGTTATCCGGGATGTGGACGCAGGCAGAGCAAGGAGAACGCCTGCTAGTCCCGTGAAGAGGAATGAGAAAGGAAAAGAGAAATTGGTTGAGGAACCAAGGAATGAGGCAGCGAAGAGCAGAAAGAAACAGTATAGTGGGCTCTACACTGAAGTGGGATTCTTCCTAGAGCCTATTGAGCTGCCCGCCTTCATCATCCAAGGAGTCGACGCATTGGGTTGGAGACAATTCTGTGAAAGTGGCCAAGTCATCCAACCCACCGCCGTGGAGGCATTTTACGAAGGAACGATTCACCGAAAGGCACATCTGATCAAACTTGAAGATGAGGTGATTTCCTTCGAGCCTCAAGAGATCAACGCATTGTTTGATCTTTCCAACAATGCGGCGGCGGAAGGCAACAGAATAATGTCGACGCCTACAGACGCCGAATTGAATGATGCCCTCTCAATCATCGCCAAACCGGGGTCAGAGTGGAACACTTCCCCAAAGGGCATTCAATCATCGGCGCCTAACTACTTGATCGCTGAGGCCAACTTGTGGCTATATTTCATCAAGCGGTCGCTGCTTCCCACAACGCATGACGCCTCGATTTCAAGGGACCGGGCCATGGTCATCTAA MASSSRQGSRNLSTTSTTPEPFTVVRPNSPELEATSPSSPRSRDLSEAQKVERNDETTVFGDILDTIDEEDDDWLDGLVDQRTKNKSRGSVPAIRGLEESDSDERLIGKVLAAVEKKRSTKEKKVRPDRAKEEEAEEDVLPLRRKNEKGKDAGTSEAVASSVAASPVEWLATKAVEKAKKLMEDIKKMKEKTESFLIAKKKRKEEIAAAKQFIDEAVRKAEFLRRIAEVATELEVEWEVSDAEKPPKAERIKKNIKKIREEKKKEKEVAFTKEKLPERKEKEVAFTKEKLPEKKKKNEVAKAPGVVIRDVDAGRARRTPASPVKRNEKGKEKLVEEPRNEAAKSRKKQYSGLYTEVGFFLEPIELPAFIIQGVDALGWRQFCESGQVIQPTAVEAFYEGTIHRKAHLIKLEDEVISFEPQEINALFDLSNNAAAEGNRIMSTPTDAELNDALSIIAKPGSEWNTSPKGIQSSAPNYLIAEANLWLYFIKRSLLPTTHDASISRDRAMVI Homology
BLAST of Clc03G11000 vs. NCBI nr
Match: WP_217833181.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 262.3 bits (669), Expect = 8.6e-66 Identity = 132/147 (89.80%), Postives = 137/147 (93.20%), Query Frame = 0
BLAST of Clc03G11000 vs. NCBI nr
Match: XP_038898613.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]) HSP 1 Score: 127.5 bits (319), Expect = 3.3e-25 Identity = 80/252 (31.75%), Postives = 131/252 (51.98%), Query Frame = 0
BLAST of Clc03G11000 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida]) HSP 1 Score: 117.9 bits (294), Expect = 2.6e-22 Identity = 79/272 (29.04%), Postives = 143/272 (52.57%), Query Frame = 0
BLAST of Clc03G11000 vs. NCBI nr
Match: WP_217833305.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 103.6 bits (257), Expect = 5.1e-18 Identity = 59/74 (79.73%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of Clc03G11000 vs. NCBI nr
Match: XP_038896288.1 (disease resistance protein RGA2-like [Benincasa hispida]) HSP 1 Score: 98.2 bits (243), Expect = 2.2e-16 Identity = 53/145 (36.55%), Postives = 78/145 (53.79%), Query Frame = 0
BLAST of Clc03G11000 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.0e-16 Identity = 76/268 (28.36%), Postives = 136/268 (50.75%), Query Frame = 0
BLAST of Clc03G11000 vs. ExPASy TrEMBL
Match: A0A5D3CW17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00800 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.6e-12 Identity = 43/122 (35.25%), Postives = 71/122 (58.20%), Query Frame = 0
BLAST of Clc03G11000 vs. ExPASy TrEMBL
Match: A0A5A7U0U4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001210 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.3e-11 Identity = 67/235 (28.51%), Postives = 107/235 (45.53%), Query Frame = 0
BLAST of Clc03G11000 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.9e-11 Identity = 58/194 (29.90%), Postives = 94/194 (48.45%), Query Frame = 0
BLAST of Clc03G11000 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.9e-11 Identity = 58/194 (29.90%), Postives = 93/194 (47.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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