
Clc03G10960 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATATTCTATGATGGTTTGACCGAGGCATCTCAGACCGTTGCAAATGCTGCCGCAGCGGGAGGACTACTGGATAAAACTTATACTGAGGCTAAGGAAATTCTCGATAGAATATCAAGAAACCATGAAGATTGCGAGGACCATGGATATAGCCGATCTGGCCGCAGACAAAACAATGCGACGGGAGCACCAGAGCATAATAGTGTTGCTGCGTTACAAGCTCAATCACCGCCATGA ATGGAGATATTCTATGATGGTTTGACCGAGGCATCTCAGACCGTTGCAAATGCTGCCGCAGCGGGAGGACTACTGGATAAAACTTATACTGAGGCTAAGGAAATTCTCGATAGAATATCAAGAAACCATGAAGATTGCGAGGACCATGGATATAGCCGATCTGGCCGCAGACAAAACAATGCGACGGGAGCACCAGAGCATAATAGTGTTGCTGCGTTACAAGCTCAATCACCGCCATGA ATGGAGATATTCTATGATGGTTTGACCGAGGCATCTCAGACCGTTGCAAATGCTGCCGCAGCGGGAGGACTACTGGATAAAACTTATACTGAGGCTAAGGAAATTCTCGATAGAATATCAAGAAACCATGAAGATTGCGAGGACCATGGATATAGCCGATCTGGCCGCAGACAAAACAATGCGACGGGAGCACCAGAGCATAATAGTGTTGCTGCGTTACAAGCTCAATCACCGCCATGA MEIFYDGLTEASQTVANAAAAGGLLDKTYTEAKEILDRISRNHEDCEDHGYSRSGRRQNNATGAPEHNSVAALQAQSPP Homology
BLAST of Clc03G10960 vs. NCBI nr
Match: XP_038896708.1 (uncharacterized protein LOC120084968 [Benincasa hispida]) HSP 1 Score: 75.9 bits (185), Expect = 1.8e-10 Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = 0
BLAST of Clc03G10960 vs. NCBI nr
Match: XP_038877377.1 (uncharacterized protein LOC120069667 [Benincasa hispida]) HSP 1 Score: 72.0 bits (175), Expect = 2.6e-09 Identity = 36/59 (61.02%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of Clc03G10960 vs. NCBI nr
Match: XP_038874882.1 (uncharacterized protein LOC120067385 [Benincasa hispida]) HSP 1 Score: 70.1 bits (170), Expect = 9.8e-09 Identity = 42/80 (52.50%), Postives = 53/80 (66.25%), Query Frame = 0
BLAST of Clc03G10960 vs. NCBI nr
Match: WP_217833177.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 68.6 bits (166), Expect = 2.8e-08 Identity = 32/42 (76.19%), Postives = 39/42 (92.86%), Query Frame = 0
BLAST of Clc03G10960 vs. NCBI nr
Match: XP_038874978.1 (putative uncharacterized protein DDB_G0279653 [Benincasa hispida]) HSP 1 Score: 68.2 bits (165), Expect = 3.7e-08 Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
|