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Clc03G10720 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGAAACTGATGCGACCACTAGCAGGGCTGAGCAGCAGCCGCAGAGAGGCAACCCTCTTGGTTTTGTCCAACGGAATCAAGACCAGTATCATCAGTATTCGAGAGATCCGCAAGCGGACGCATCAACCTCATTTTATTCCTTGGAATCTCTTTTACGAGAATGTTTAACTACATGCAATGCGATGTTCCAAAGCCAAATCGCTGCAAATCCCGATTTAGAAGTTTATATGATTCAAATTGCAGAGGCGCTCGAAAATGAAAAGCAAGGAGCATTGCTAAGTACGACTGAAGTTCCAAGAGGGAACTTAGGAGAACAATGTCAAGGTGAGACATTGTTAAGTGGGAAAATCAACCCCACAGTGCATTATGAGGGAACACAAGGAAACTTGCAACCCCTAAACGCTTCAACAAGTCAACCGATGGAGAGTACCATGCATATTGTTCAGCATCCATCGTCATCCACCGAATCAGAGGATGAGGAAAATATAGAGCGGAGAGAAAAAGCAACGCAGGCAGAACCTGCGTCTGTATATGAAGATACTTTTTCTGGACGCGTCCTGATTGACGTCCAAGAAGAAATCTCAACACCCCGCGCAGGTGATCAGGTAAAATTTAATGTAGTTAACGCGTTAAACGATCCTGATCATTTCCAATTTTGTCCAATGAAAGCAGATATCAATGAAAAGGCAAGACCCGTGAACGCGGCGTTGAGAACAGGTTGTTTGTGTTCCGTTCAGATCATGCATCCATGGAGAACAGATTGCTAACGTGTCGTCCTGCGTTAAGAAGTCATCAACGCATCGTCTGCATTCCTGCGTCAAAACATGCGTTTTAGGGCTCAAAAAGTGGTAAAATCATTATCTTCATAAAAATACAAGAGTATAACGCGAAGGAAGATTTATTAATGGAATTTAACATAAACTACCGCATGCTTCTCTATTTAAACTCTATTTATCTATGAAAAAGGTTATAATAACTTGTATTTCTACAAGTTATTAGCGAAGCCTGGGGCTAAGTGAGACGTTTCACCCACAGGTATCAAAACGCTATCCGCTAGCAGCCTAAGACCAGAGGCAAACCTGTGGGTATACTTGGTGAATAAGCGGCTGATCCCTACAACGCATGACAAAACAATATCAAGGGATCGGGTGATGACAGCTTATTGCATTATGCGTCGCATCACCCTGGATGTTGGACGCATAATCGCGGCGCAGATAAGAGGGGTGTTCAACAAGCCAAGGGGCCAACTCTTTTTCCCCACTCTTATCATGAATTTGTACGCCAATGCTTCCATCGGAGGGCCAACGGAAGTGTTAGACGCAGAGAAGATGATTGAAGTCAGTGGCGTAATCGCCCACAAGACTCTGCGTCGGTTGATGAGAGGATCACAATATCTGCCAGAGCCTGCGAAGGCCACCAAAAGACCTCATCAACCCATTCCGCCTCCAAAGCCGCAACCGCAGAAGAAGGGGAAGCCGTCCAAGCTGAAACGCAAGGCTGTGGCAAGTCCTGATGCCACCATTAGACCTTCCCCAACCTCAAGCGCTTCACCCCCACTTCCAACAACCAGAAGAGAACCAACTCGACCTCCTCCTGAGACGCATCGCCCTAAGCCACCTCCACCTTCTCCTAAAACGCATCGCCCAAAACCTTCTAAACCTCAACCTTCCGCAAAACCCTCCTCCCTAATCTTCTCAATAAGAGTTGATGACTCACACTATGGGGATTTTGGCGCGACTTTTATGCGTCCATCATCCACTGTGTTTGATGAAACTCCATCAACCTCTCACCCTCAGCCAAACCCGCCTTAA ATGCTTGAAACTGATGCGACCACTAGCAGGGCTGAGCAGCAGCCGCAGAGAGGCAACCCTCTTGGTTTTGTCCAACGGAATCAAGACCAGTATCATCAGTATTCGAGAGATCCGCAAGCGGACGCATCAACCTCATTTTATTCCTTGGAATCTCTTTTACGAGAATGTTTAACTACATGCAATGCGATGTTCCAAAGCCAAATCGCTGCAAATCCCGATTTAGAAGTTTATATGATTCAAATTGCAGAGGCGCTCGAAAATGAAAAGCAAGGAGCATTGCTAAGTACGACTGAAGTTCCAAGAGGGAACTTAGGAGAACAATGTCAAGGTGAGACATTGTTAAGTGGGAAAATCAACCCCACAGTGCATTATGAGGGAACACAAGGAAACTTGCAACCCCTAAACGCTTCAACAAGTCAACCGATGGAGAGTACCATGCATATTGTTCAGCATCCATCGTCATCCACCGAATCAGAGGATGAGGAAAATATAGAGCGGAGAGAAAAAGCAACGCAGGCAGAACCTGCGTCTGTATATGAAGATACTTTTTCTGGACGCGTCCTGATTGACGTCCAAGAAGAAATCTCAACACCCCGCGCAGGTGATCAGGTAAAATTTAATGTAGTTAACGCGTTAAACGATCCTGATCATTTCCAATTTTGTCCAATGAAAGCAGATATCAATGAAAAGGCAAGACCCGTGAACGCGGCGTTGAGAACAGGTATCAAAACGCTATCCGCTAGCAGCCTAAGACCAGAGGCAAACCTGTGGGTATACTTGGTGAATAAGCGGCTGATCCCTACAACGCATGACAAAACAATATCAAGGGATCGGGTGATGACAGCTTATTGCATTATGCGTCGCATCACCCTGGATGTTGGACGCATAATCGCGGCGCAGATAAGAGGGGTGTTCAACAAGCCAAGGGGCCAACTCTTTTTCCCCACTCTTATCATGAATTTGTACGCCAATGCTTCCATCGGAGGGCCAACGGAAGTGTTAGACGCAGAGAAGATGATTGAAGTCAGTGGCGTAATCGCCCACAAGACTCTGCGTCGGTTGATGAGAGGATCACAATATCTGCCAGAGCCTGCGAAGGCCACCAAAAGACCTCATCAACCCATTCCGCCTCCAAAGCCGCAACCGCAGAAGAAGGGGAAGCCGTCCAAGCTGAAACGCAAGGCTGTGGCAAGTCCTGATGCCACCATTAGACCTTCCCCAACCTCAAGCGCTTCACCCCCACTTCCAACAACCAGAAGAGAACCAACTCGACCTCCTCCTGAGACGCATCGCCCTAAGCCACCTCCACCTTCTCCTAAAACGCATCGCCCAAAACCTTCTAAACCTCAACCTTCCGCAAAACCCTCCTCCCTAATCTTCTCAATAAGAGTTGATGACTCACACTATGGGGATTTTGGCGCGACTTTTATGCGTCCATCATCCACTGTGTTTGATGAAACTCCATCAACCTCTCACCCTCAGCCAAACCCGCCTTAA ATGCTTGAAACTGATGCGACCACTAGCAGGGCTGAGCAGCAGCCGCAGAGAGGCAACCCTCTTGGTTTTGTCCAACGGAATCAAGACCAGTATCATCAGTATTCGAGAGATCCGCAAGCGGACGCATCAACCTCATTTTATTCCTTGGAATCTCTTTTACGAGAATGTTTAACTACATGCAATGCGATGTTCCAAAGCCAAATCGCTGCAAATCCCGATTTAGAAGTTTATATGATTCAAATTGCAGAGGCGCTCGAAAATGAAAAGCAAGGAGCATTGCTAAGTACGACTGAAGTTCCAAGAGGGAACTTAGGAGAACAATGTCAAGGTGAGACATTGTTAAGTGGGAAAATCAACCCCACAGTGCATTATGAGGGAACACAAGGAAACTTGCAACCCCTAAACGCTTCAACAAGTCAACCGATGGAGAGTACCATGCATATTGTTCAGCATCCATCGTCATCCACCGAATCAGAGGATGAGGAAAATATAGAGCGGAGAGAAAAAGCAACGCAGGCAGAACCTGCGTCTGTATATGAAGATACTTTTTCTGGACGCGTCCTGATTGACGTCCAAGAAGAAATCTCAACACCCCGCGCAGGTGATCAGGTAAAATTTAATGTAGTTAACGCGTTAAACGATCCTGATCATTTCCAATTTTGTCCAATGAAAGCAGATATCAATGAAAAGGCAAGACCCGTGAACGCGGCGTTGAGAACAGGTATCAAAACGCTATCCGCTAGCAGCCTAAGACCAGAGGCAAACCTGTGGGTATACTTGGTGAATAAGCGGCTGATCCCTACAACGCATGACAAAACAATATCAAGGGATCGGGTGATGACAGCTTATTGCATTATGCGTCGCATCACCCTGGATGTTGGACGCATAATCGCGGCGCAGATAAGAGGGGTGTTCAACAAGCCAAGGGGCCAACTCTTTTTCCCCACTCTTATCATGAATTTGTACGCCAATGCTTCCATCGGAGGGCCAACGGAAGTGTTAGACGCAGAGAAGATGATTGAAGTCAGTGGCGTAATCGCCCACAAGACTCTGCGTCGGTTGATGAGAGGATCACAATATCTGCCAGAGCCTGCGAAGGCCACCAAAAGACCTCATCAACCCATTCCGCCTCCAAAGCCGCAACCGCAGAAGAAGGGGAAGCCGTCCAAGCTGAAACGCAAGGCTGTGGCAAGTCCTGATGCCACCATTAGACCTTCCCCAACCTCAAGCGCTTCACCCCCACTTCCAACAACCAGAAGAGAACCAACTCGACCTCCTCCTGAGACGCATCGCCCTAAGCCACCTCCACCTTCTCCTAAAACGCATCGCCCAAAACCTTCTAAACCTCAACCTTCCGCAAAACCCTCCTCCCTAATCTTCTCAATAAGAGTTGATGACTCACACTATGGGGATTTTGGCGCGACTTTTATGCGTCCATCATCCACTGTGTTTGATGAAACTCCATCAACCTCTCACCCTCAGCCAAACCCGCCTTAA MLETDATTSRAEQQPQRGNPLGFVQRNQDQYHQYSRDPQADASTSFYSLESLLRECLTTCNAMFQSQIAANPDLEVYMIQIAEALENEKQGALLSTTEVPRGNLGEQCQGETLLSGKINPTVHYEGTQGNLQPLNASTSQPMESTMHIVQHPSSSTESEDEENIERREKATQAEPASVYEDTFSGRVLIDVQEEISTPRAGDQVKFNVVNALNDPDHFQFCPMKADINEKARPVNAALRTGIKTLSASSLRPEANLWVYLVNKRLIPTTHDKTISRDRVMTAYCIMRRITLDVGRIIAAQIRGVFNKPRGQLFFPTLIMNLYANASIGGPTEVLDAEKMIEVSGVIAHKTLRRLMRGSQYLPEPAKATKRPHQPIPPPKPQPQKKGKPSKLKRKAVASPDATIRPSPTSSASPPLPTTRREPTRPPPETHRPKPPPPSPKTHRPKPSKPQPSAKPSSLIFSIRVDDSHYGDFGATFMRPSSTVFDETPSTSHPQPNPP Homology
BLAST of Clc03G10720 vs. NCBI nr
Match: WP_217833202.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 134.0 bits (336), Expect = 3.5e-27 Identity = 69/85 (81.18%), Postives = 75/85 (88.24%), Query Frame = 0
BLAST of Clc03G10720 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida]) HSP 1 Score: 89.4 bits (220), Expect = 9.8e-14 Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 0
BLAST of Clc03G10720 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]) HSP 1 Score: 88.2 bits (217), Expect = 2.2e-13 Identity = 61/160 (38.12%), Postives = 88/160 (55.00%), Query Frame = 0
BLAST of Clc03G10720 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii]) HSP 1 Score: 75.9 bits (185), Expect = 1.1e-09 Identity = 46/144 (31.94%), Postives = 75/144 (52.08%), Query Frame = 0
BLAST of Clc03G10720 vs. NCBI nr
Match: XP_024971944.1 (uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]) HSP 1 Score: 74.7 bits (182), Expect = 2.5e-09 Identity = 39/118 (33.05%), Postives = 67/118 (56.78%), Query Frame = 0
BLAST of Clc03G10720 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.4e-10 Identity = 46/144 (31.94%), Postives = 75/144 (52.08%), Query Frame = 0
BLAST of Clc03G10720 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.0e-08 Identity = 43/136 (31.62%), Postives = 72/136 (52.94%), Query Frame = 0
BLAST of Clc03G10720 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.7e-08 Identity = 40/131 (30.53%), Postives = 69/131 (52.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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