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Clc03G10600 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAACTGACTTGTCGGAAGACTTCAAAGCTTTGCCTGATCTCGTTAGGACAGAGATTACGGGCGTCAATACAAGAGTGAATCTCACTATGAGAGCGATGGGAAACCAAACCCCAACTGGGGGTGCGGTCCAGTTTAATAGGGTGAAAATACCCGAGCCCAAGCCCTTCTGTGGGGCTCCAGACGCGAAGGCTGTAGAGAACTTCATATTTGACATGGAGCAGTATTTCAGGGCCACAAATACGACTACTGAAGAGTCGAAAATCACCTTGGCAACGATGCACCTGGCAGACGACACCAAGTTATGA ATGGTAACTGACTTGTCGGAAGACTTCAAAGCTTTGCCTGATCTCGTTAGGACAGAGATTACGGGCGTCAATACAAGAGTGAATCTCACTATGAGAGCGATGGGAAACCAAACCCCAACTGGGGGTGCGGTCCAGTTTAATAGGGTGAAAATACCCGAGCCCAAGCCCTTCTGTGGGGCTCCAGACGCGAAGGCTGTAGAGAACTTCATATTTGACATGGAGCAGTATTTCAGGGCCACAAATACGACTACTGAAGAGTCGAAAATCACCTTGGCAACGATGCACCTGGCAGACGACACCAAGTTATGA ATGGTAACTGACTTGTCGGAAGACTTCAAAGCTTTGCCTGATCTCGTTAGGACAGAGATTACGGGCGTCAATACAAGAGTGAATCTCACTATGAGAGCGATGGGAAACCAAACCCCAACTGGGGGTGCGGTCCAGTTTAATAGGGTGAAAATACCCGAGCCCAAGCCCTTCTGTGGGGCTCCAGACGCGAAGGCTGTAGAGAACTTCATATTTGACATGGAGCAGTATTTCAGGGCCACAAATACGACTACTGAAGAGTCGAAAATCACCTTGGCAACGATGCACCTGGCAGACGACACCAAGTTATGA MVTDLSEDFKALPDLVRTEITGVNTRVNLTMRAMGNQTPTGGAVQFNRVKIPEPKPFCGAPDAKAVENFIFDMEQYFRATNTTTEESKITLATMHLADDTKL Homology
BLAST of Clc03G10600 vs. NCBI nr
Match: KAA0053339.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 153.3 bits (386), Expect = 1.1e-33 Identity = 72/102 (70.59%), Postives = 87/102 (85.29%), Query Frame = 0
BLAST of Clc03G10600 vs. NCBI nr
Match: KAA0065409.1 (reverse transcriptase [Cucumis melo var. makuwa]) HSP 1 Score: 152.1 bits (383), Expect = 2.5e-33 Identity = 72/102 (70.59%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of Clc03G10600 vs. NCBI nr
Match: XP_038890158.1 (uncharacterized protein LOC120079815 [Benincasa hispida]) HSP 1 Score: 152.1 bits (383), Expect = 2.5e-33 Identity = 72/102 (70.59%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of Clc03G10600 vs. NCBI nr
Match: KAA0035532.1 (uncharacterized protein E6C27_scaffold285G001980 [Cucumis melo var. makuwa]) HSP 1 Score: 151.4 bits (381), Expect = 4.3e-33 Identity = 71/102 (69.61%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of Clc03G10600 vs. NCBI nr
Match: TYK18566.1 (uncharacterized protein E5676_scaffold119G00720 [Cucumis melo var. makuwa]) HSP 1 Score: 151.4 bits (381), Expect = 4.3e-33 Identity = 71/102 (69.61%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of Clc03G10600 vs. ExPASy TrEMBL
Match: A0A5A7UIP7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27G00270 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 5.5e-34 Identity = 72/102 (70.59%), Postives = 87/102 (85.29%), Query Frame = 0
BLAST of Clc03G10600 vs. ExPASy TrEMBL
Match: A0A5A7VIW9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00800 PE=4 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 1.2e-33 Identity = 72/102 (70.59%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of Clc03G10600 vs. ExPASy TrEMBL
Match: A0A5D3C4R1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001990 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.1e-33 Identity = 71/102 (69.61%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of Clc03G10600 vs. ExPASy TrEMBL
Match: A0A5D3BRZ6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00060 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.1e-33 Identity = 71/102 (69.61%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of Clc03G10600 vs. ExPASy TrEMBL
Match: A0A5A7UXR6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005550 PE=4 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 2.1e-33 Identity = 71/102 (69.61%), Postives = 86/102 (84.31%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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