
Clc03G10210 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTTATATGACGCATAGGAGAGTGTTAAGAACCAAAATTATTCCTACAGACAGGTAACACTTCTTGGCCCTTGTTAATTGAGTTCCACAGTCACTTACCCTCTCGAGCAGTTTGATTATTACTACTTATATCGGTTAGCTAGATGGACATAAGCATCGGATTAAGTTTGCAATTGACAAGATGAAATAGTTACACTATGGTACTTAGTTAGATGCTAACGCAACCCTAGACCCTTGAGAGATTAGTTACTCATGGATTGAAAGTAAAAAGCGGAAAGTATAAAAAAATGAGTAGACATGGAAGAAATATATATTGATGAATGGAATACAACTTTACATAAGCTCAATGTCTTGACACAAATCTAAAATCAAGATAGAAAAACTAAGATAGAAAGCAGGAAAGACGTCAATGTCCTGAGTCGCCTGGATGAAAGCGTGAGGTTCTGGTGTGAAGTGGTCAGGCGGAGGGAAGACTCTTCTCTGTCGAGCTATTCGTCTCCGGTTGAAGTCTGGAGAGAACTCTGCTGTCACTTATGCAATTCTTCCGAGAAACAACAACCCTTTTTCATCTTGCAGGTTTGCCCTTTTATAGATGTTGCGTTCGCAATCAAGGGCAAATCTGCTTGATTAGCAGTGAGATTGATATCATGCATCCATCTTGCCTGATTGCATTATTCTCGGGTCAATTAAGATCCACCACTTTAGCAACAGATTATGTATGTTAGTCATCTGACAATCTCTCAAGATTCTGATCTGATTGTCCGCGGCATTGCATTGATGGTTGTGTTTGTGTCCATTGATAGTTTGGCCGATGTCAACGCGTCATGAGTTGCTAACACATAGTCTTGTGTTGAGTAGTTAATGCATCTATAGGTTCACGTTCCGTTCAGATCATGCGTCCACGAAGAACAGATTGCTAACGCATAGTCCTGCGTTAAGAAGTTGTCAACGCATCGTTTGCACTTCTGCGTTAAAACATGCCTTTTAGGCTCAAAAAGTGGTAAAATCATTATCTTCATAAAAATACAAGAGTATAACGCAAAGGAAGATTTATTAATAAAAATCAACATAAACTACCGCATGCTTCTCTATTTAATCTCTATTTATCTAAGAAAAAGGCTATAAAAACTTGTATTTCTACAAGTTATCAACTTCCCCAAAGGGCTTTCAAACATTGGCGCCGACTTGCTTGATCGCCAAGGCCAACCTGTGGCTTTACTTCATCAAGCGGTCGCTAATCCCCACAACACATGACGCCTCAATTTCAAGGGACCGTGCCATGGTCATTTACTGCATCATGCGAGGAATTCGGCTAGACGTGGGACGCATTATTGCCCCACAGATTCGAGGGTTGTTTTTCAAGCCAAGGTGTCAGCTATTCTTCCCCTTTCTTGTGACAAGACTGTGCGCCAACGTAGAGTTCATGGAGGATGCACCAGTCAGAGCAGTAAATGGAGTCCTTTCAGCCCAAAGTCTCAGACGGATATTAAAGAATTCCCCGCATCTGCTTGAGGCGGCCAACTCAAAGAAGAGGCCGACCAAGTCACAAGAACCATCATCCAACCAACCTCCTCAACCCAAGAAGAGGAAACTGGTCAAGAAGAATTTTGAGATACAGGCGTCGAGTTCACAACCCAGTGAAGCTGAAGAAACTGTTCAGTTTGACGCCAACACACAAGCCTTGACCATTTATACTCCTTCCATCGACCCAATCACTAAGGAGCCCTCTTCACCACCAACTCCCCCTTCTCCTTCCCCTAAAATCCAAAAAGAGCCACTTCATCTACCTACCACCCAACGTGACCTCCCAACGCCTCTTCAGCTTCCTATCGCAGACTTAAACGAAGAGTCAAAGGAAGTGTCGCCACCTTCTTCACCCCACCTGGAGTTAACCCTCTCCCCGCCTCAATCATCCACCTTTCGAGAGGCAACTCCACCACCACCACCTGTTTAG ATGCGTTATATGACGCATAGGAGAGTGTTAAGAACCAAAATTATTCCTACAGACAGAAAAACTAAGATAGAAAGCAGGAAAGACGTCAATGTCCTGAGTCGCCTGGATGAAAGCGTGAGGTTCTGGTGTGAAGTGGTCAGGCGGAGGGAAGACTCTTCTCTGTCGAGCTATTCGTCTCCGGTTGAAGTCTGGAGAGAACTCTGCTGTCACTTATGCAATTCTTCCGAGAAACAACAACCCTTTTTCATCTTGCAGTTATCAACTTCCCCAAAGGGCTTTCAAACATTGGCGCCGACTTGCTTGATCGCCAAGGCCAACCTGTGGCTTTACTTCATCAAGCGGTCGCTAATCCCCACAACACATGACGCCTCAATTTCAAGGGACCGTGCCATGGTCATTTACTGCATCATGCGAGGAATTCGGCTAGACGTGGGACGCATTATTGCCCCACAGATTCGAGGGTTGTTTTTCAAGCCAAGGTGTCAGCTATTCTTCCCCTTTCTTGTGACAAGACTGTGCGCCAACGTAGAGTTCATGGAGGATGCACCAGTCAGAGCAGTAAATGGAGTCCTTTCAGCCCAAAGTCTCAGACGGATATTAAAGAATTCCCCGCATCTGCTTGAGGCGGCCAACTCAAAGAAGAGGCCGACCAAGTCACAAGAACCATCATCCAACCAACCTCCTCAACCCAAGAAGAGGAAACTGGTCAAGAAGAATTTTGAGATACAGGCGTCGAGTTCACAACCCAGTGAAGCTGAAGAAACTGTTCAGTTTGACGCCAACACACAAGCCTTGACCATTTATACTCCTTCCATCGACCCAATCACTAAGGAGCCCTCTTCACCACCAACTCCCCCTTCTCCTTCCCCTAAAATCCAAAAAGAGCCACTTCATCTACCTACCACCCAACGTGACCTCCCAACGCCTCTTCAGCTTCCTATCGCAGACTTAAACGAAGAGTCAAAGGAAGTGTCGCCACCTTCTTCACCCCACCTGGAGTTAACCCTCTCCCCGCCTCAATCATCCACCTTTCGAGAGGCAACTCCACCACCACCACCTGTTTAG ATGCGTTATATGACGCATAGGAGAGTGTTAAGAACCAAAATTATTCCTACAGACAGAAAAACTAAGATAGAAAGCAGGAAAGACGTCAATGTCCTGAGTCGCCTGGATGAAAGCGTGAGGTTCTGGTGTGAAGTGGTCAGGCGGAGGGAAGACTCTTCTCTGTCGAGCTATTCGTCTCCGGTTGAAGTCTGGAGAGAACTCTGCTGTCACTTATGCAATTCTTCCGAGAAACAACAACCCTTTTTCATCTTGCAGTTATCAACTTCCCCAAAGGGCTTTCAAACATTGGCGCCGACTTGCTTGATCGCCAAGGCCAACCTGTGGCTTTACTTCATCAAGCGGTCGCTAATCCCCACAACACATGACGCCTCAATTTCAAGGGACCGTGCCATGGTCATTTACTGCATCATGCGAGGAATTCGGCTAGACGTGGGACGCATTATTGCCCCACAGATTCGAGGGTTGTTTTTCAAGCCAAGGTGTCAGCTATTCTTCCCCTTTCTTGTGACAAGACTGTGCGCCAACGTAGAGTTCATGGAGGATGCACCAGTCAGAGCAGTAAATGGAGTCCTTTCAGCCCAAAGTCTCAGACGGATATTAAAGAATTCCCCGCATCTGCTTGAGGCGGCCAACTCAAAGAAGAGGCCGACCAAGTCACAAGAACCATCATCCAACCAACCTCCTCAACCCAAGAAGAGGAAACTGGTCAAGAAGAATTTTGAGATACAGGCGTCGAGTTCACAACCCAGTGAAGCTGAAGAAACTGTTCAGTTTGACGCCAACACACAAGCCTTGACCATTTATACTCCTTCCATCGACCCAATCACTAAGGAGCCCTCTTCACCACCAACTCCCCCTTCTCCTTCCCCTAAAATCCAAAAAGAGCCACTTCATCTACCTACCACCCAACGTGACCTCCCAACGCCTCTTCAGCTTCCTATCGCAGACTTAAACGAAGAGTCAAAGGAAGTGTCGCCACCTTCTTCACCCCACCTGGAGTTAACCCTCTCCCCGCCTCAATCATCCACCTTTCGAGAGGCAACTCCACCACCACCACCTGTTTAG MRYMTHRRVLRTKIIPTDRKTKIESRKDVNVLSRLDESVRFWCEVVRRREDSSLSSYSSPVEVWRELCCHLCNSSEKQQPFFILQLSTSPKGFQTLAPTCLIAKANLWLYFIKRSLIPTTHDASISRDRAMVIYCIMRGIRLDVGRIIAPQIRGLFFKPRCQLFFPFLVTRLCANVEFMEDAPVRAVNGVLSAQSLRRILKNSPHLLEAANSKKRPTKSQEPSSNQPPQPKKRKLVKKNFEIQASSSQPSEAEETVQFDANTQALTIYTPSIDPITKEPSSPPTPPSPSPKIQKEPLHLPTTQRDLPTPLQLPIADLNEESKEVSPPSSPHLELTLSPPQSSTFREATPPPPPV Homology
BLAST of Clc03G10210 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii]) HSP 1 Score: 79.7 bits (195), Expect = 5.5e-11 Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = 0
BLAST of Clc03G10210 vs. NCBI nr
Match: XP_038876674.1 (chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]) HSP 1 Score: 79.7 bits (195), Expect = 5.5e-11 Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Clc03G10210 vs. NCBI nr
Match: XP_038904385.1 (uncharacterized protein LOC120090747 [Benincasa hispida]) HSP 1 Score: 77.0 bits (188), Expect = 3.6e-10 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Clc03G10210 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 75.9 bits (185), Expect = 8.0e-10 Identity = 44/143 (30.77%), Postives = 76/143 (53.15%), Query Frame = 0
BLAST of Clc03G10210 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]) HSP 1 Score: 75.9 bits (185), Expect = 8.0e-10 Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = 0
BLAST of Clc03G10210 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.7e-11 Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = 0
BLAST of Clc03G10210 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.9e-10 Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = 0
BLAST of Clc03G10210 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.9e-10 Identity = 44/143 (30.77%), Postives = 76/143 (53.15%), Query Frame = 0
BLAST of Clc03G10210 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 6.6e-10 Identity = 41/127 (32.28%), Postives = 69/127 (54.33%), Query Frame = 0
BLAST of Clc03G10210 vs. ExPASy TrEMBL
Match: A0A2G9G9R6 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25440 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.6e-08 Identity = 39/130 (30.00%), Postives = 70/130 (53.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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