Clc03G08880 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGACGACGACGTGTAGCGGTCGCCATAATCGTGCTGTTGGCGTTGATTATGGACACTTTCTTCTCTGTTGATGGAAGACATTTTAAGTTGCAAGATATGAAAGGCAAGAGAAGAATCCAACTGGTGAGAATCAAATGTTAAGAGGTAGAAAAGAATATGAAACTAGCGAATATAATCAACATGGATGCTATAAAAGTGACTATAATTGTTGGAGTAAGAGGAGACAAAGGAATAGGGGATTTTTTCTAAATAAATACCTACATATATAGAGAGTGTGGTATATAATTTGTATGACTTTTTGTGTTTTTAATAAGTTGAATATTCATTTTTCTAGGTAGGGTCAGCTAGAAAGATGGTATCAAATGAGGATCTTTTGTATGTAATATTATGTAGGTTAATTATGAAGGATGAATGCAGCATGTGTATTTATGTTATGGTATAATAATAAATGTGTATGGAATTTGAATAATAAAGTAGCTTATTTAGAATTTATCAAACTTGGTCTACATGTTAAATCTATATAATGGATGTCAATCAATTAAAACATAAGTTCTCCTACCAATGGGTCAAAAATTGAATTCTTACATTTCCATGTGTTGTTACCTTAAAAAAATAATAAACTAAAATTAAATTAAATTAAATTAAATTAAATTGTGGTTGATAGATTGTGCATGTTACGAGAATTAAGTATAAAAAAAATTACTTATGAAAAACAAATGTCACCGTGAGGTTTCTTTTACCCAAAAAGAGTAAAAAGTATTTGGTCCAAAAAGTTGGAGTTGGAGAGAGTGGAATTGTGAATCCATTCCTTGTGTGGTCCAAAGAGTTCTGAACCACATATCTAAAAAACATCAATTTTATGCTTTATTAACTCCCTACATTATGGGCTCAAGACTTCACTATTTCTCAAACTTCACAACTTCACTCCTTTACACAAATATTTCTTTTTTGCTATATTTGAAAACAACCCTCAAATTAAGAAGTCAATAATATAATTAAATAAGAAATATTTTTGCTCCCAAATATTTTATTCTTATTTTTAATCTTTAATTCTTCCATTTCTTTCTCTTTTTCAATTTTGGAACTCTTCAATATGTTTTCTTAATTTATGCTAAAAATGCTCCCATTTTTCATAAATTCCCCCGTTGTGTTCTAATTTCTAAAAAACTTGAAATTCAAACAAATAATATGTGAAAGCTCATCTATTCATGCAAAAACAAACTAGGACCGGTTTGAATTAACTTAAAAAATAAATATTTTTTAAAAATTTATTTTCATTTAAACACTTTTGGTAAGAATTCTTTAAAATAAAGATACTAATGACTTTCAAATTTCATTTTAAGTGGTTGTAAAACACTTGTGAAAAAAGTCAAATACTTGAAAAGATATTCCAAACAGACCTAAAACATAGTCTTAAAAGTGACATAAATATCACCAAAAAAAAAAAAAAATCGAGCATGCCATGTTCATTCCTATTGTGAGCTCCACTATGTCAAGTTTCAAATCTTTTTCTTCCGCTCTTAAGATGCCACCCAACCCTAAAATATTTTATTCTTCAGCTCTTGGATGGGTTTTTTCTCATTCTTCTTCAATTTTGGAACTCTTCATTTTATCTTCTTTTATGCTTAATAAGCTCCATTTTAACCTTGAATTTCTTTCATTATGCTCCAAATGCTTTAAAATATTGAATTTTTACCTAAAAACCAGCTAAAACATAAGTCTTAGATAAAAGTAACCAATTTTTCTCATTGTCAAGAATCAAGAATTAACTTTGGAATATTACCAAAAGTGTATGTATTCCTTTGTGTAGGCTGAGCCAAGAACTTGCATGTTATATCGATCATTTTACCTAGGACTCTAAGATCAACTTTGGAATATTACCAAAAGGAGTTGTCGAGGCAAGTAAAATAACCAGACTATCCACCTCCTCTACTGCATGGCTCCTTCCTTTATTTGAAAGAACAAGAATCCAAGTTTAATTTTGAGATGTATACTAGAGCACCTATTAATTCAACTATCTCCTTAAATAGCAAATGTAGCATTATGAGTACCTCATAAATCCAATTTTCGTCGCAATCCACCTCAATTCAAAGTTCATGTTACTGTTCCTAATACCAATGGCTTGTTAGCTGTAGGTACCAATGGCCTTGCTCATCATAAAAACCTAACATATGTAAGGCTCGGGTTGGGTCGTTATAACAAAACAATTATAAAATATATATGTTAAAACTTCAAAATATATCACAAAATAGATGAAATGATGGTAGTTTGGAGAAAAACGTGGCTATTAAATTAGACATAAAATTGAAAACAAATTGACGGAGAAAGGATAAATCATGATGGTTTTAATGTCATAAAGAAGATCCTCTATTGGCGGTACCGACTACGAAAGCAAATATAATGAATTAGTTGTTTTTAAGCTACGTTTTCAATTGCTTTGCAGGGCGACAGAAGTAATTGAAGAAACACTGATCATGGATAAATCTATTACAAATCACCTTTTAAGCACAAGTTTAACCTCACACTTAATAAAATCAATCGTGTGAGCATAGAAAAAGAAAATTACTATGAATAGAAAAAAATACCAAACTATTTTATAAATATAGCAAAATTTTACTTTATATCTGTGATAGACCGCAGTAGAACTAAATAGACATCTATTTGTGTCTATCACTAAAGTGATAGATGTTTACCTGAGTTTACGCCGTCTATTATAGATAAAAAGTAAAATTTTGCTATATTTGTAATTATTTTCAATAATTTTTCTATTTTTGAAAACTATAAAATAAGTAGTTAACCATGTTTTTTCTTTAAGTTAAAAATAGAGACTAAAGTTGAGCCAAACTTTGAAAACATCACTTACAAACTTTATTATCGGAAAACTAATTTTGGCATATTAGTTTTATTCTAAAAACTTCTTACCAAAATATTAAACAAATTGTGTTTTTGTTGTTTGTCTAAAACTAAAACATTATTTTTAGGTTTTACACTGAATATTACCTAAATATCAATTGAGAATCAAATGTTATATAAAAACGAGGCAATAGAAGAAGGGAAAACACAAGGCAAAAATGGTGTCAATTAGTTCTAATGTGTTTTTTGGAGCATTCGCTCTCATAATCCTCTAGTTGCACTATGGAATCTATCGAGCAAATGCTAAAAACGTTCTTGTAGTCGATAAAGATGTCTCTATTCTAGAAAATGAATCGAGGGACCACATCATAAAGCATCCAAAAAGTCATATCCATTTCTCACTCGTGAAACACAAGAGAATACTTGACTTAGCTCCACCGTATGAGCCGAGTCAAAGAACTTCAGACAATCCACCTCCACCACTACATATTCCATCTAAGATTAACTTCGGAATATTACCAAAAGGTTTTCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCAGACAATCCACCTCCACCACTGCATGTTCCATCTAGGATTAACTTCGAAATATTACCAAAAGGTGTTCGTATTCCTCCATCTGGGCCGAGTCAAAGAACTTCAGACTCTTCACCTCCCCCATCGCATGTCCCATCTAGGATTAACTTTGGAAATTTACCAAAAGGTGTTCGTATTCCTTCGTGTGGACCGAGTCAAATAACTTCAGAAAATCCACCTCCCCCACACCATGTCCTATCAAGGATTAACTTTGGAATATTACCAAAAGGTCATCACATTCCTCCATCTGGGCCAAGTCAAAGAACTTCTGATTCTCCACCTCCCCCACCGCATGTCCCATCCAGGATTAACTTCGGAATTTTACCAAAAGGTGTTCGTATTCCTCCATCTGGGCCGAGTCAAAGAACTTCAGACAATCCACTTCCTACACCCCATATCCCATCTATGATTAACTTTGGAATATTACCAAAAAGTATTCATATTCCTTCGTCTCGGCCAAGTCAAAGAACTTCAGACAATCCACCACCCCCATCGCATATCCCGTCTAGGATTAACTTTGGAATATTACCAAAAGGTCTTCGGATTCCTCGGTCTAGGCCGAGTCAAAGAAATTCAGATTCTCCACCTCCCCCACTGCACGTTCAATCTAGGATTAACTTCGGAATATTACCAAAAGGTGTTCGTATTCCTCCGTCTGGGCCAAGTCAAAGAACTTCAGACTATCCACCTCCCCCACAACATGTCTCCATCATTTTACATAAAGAATCGATGATCAACTTTGGGATATTACCAAAAGGTATGCGTATTCCTCCATCTGGACCGAGTACAAGAGCCTCATATCCACCTCCTCCACTACATGGTCCTATTATTTGA ATGAGACGACGACGTGTAGCGGTCGCCATAATCGTGCTGTTGGCGTTGATTATGGACACTTTCTTCTCTGTTGATGGAAGACATTTTAAGTTGCAAGATATGAAAGGCAAGAGAAGAATCCAACTGTTGCACTATGGAATCTATCGAGCAAATGCTAAAAACGTTCTTGTAGTCGATAAAGATGTCTCTATTCTAGAAAATGAATCGAGGGACCACATCATAAAGCATCCAAAAAGTCATATCCATTTCTCACTCGTGAAACACAAGAGAATACTTGACTTAGCTCCACCGTATGAGCCGAGTCAAAGAACTTCAGACAATCCACCTCCACCACTACATATTCCATCTAAGATTAACTTCGGAATATTACCAAAAGGTTTTCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCAGACAATCCACCTCCACCACTGCATGTTCCATCTAGGATTAACTTCGAAATATTACCAAAAGGTGTTCGTATTCCTCCATCTGGGCCGAGTCAAAGAACTTCAGACTCTTCACCTCCCCCATCGCATGTCCCATCTAGGATTAACTTTGGAAATTTACCAAAAGGTGTTCGTATTCCTTCGTGTGGACCGAGTCAAATAACTTCAGAAAATCCACCTCCCCCACACCATGTCCTATCAAGGATTAACTTTGGAATATTACCAAAAGGTCATCACATTCCTCCATCTGGGCCAAGTCAAAGAACTTCTGATTCTCCACCTCCCCCACCGCATGTCCCATCCAGGATTAACTTCGGAATTTTACCAAAAGGTGTTCGTATTCCTCCATCTGGGCCGAGTCAAAGAACTTCAGACAATCCACTTCCTACACCCCATATCCCATCTATGATTAACTTTGGAATATTACCAAAAAGTATTCATATTCCTTCGTCTCGGCCAAGTCAAAGAACTTCAGACAATCCACCACCCCCATCGCATATCCCGTCTAGGATTAACTTTGGAATATTACCAAAAGGTCTTCGGATTCCTCGGTCTAGGCCGAGTCAAAGAAATTCAGATTCTCCACCTCCCCCACTGCACGTTCAATCTAGGATTAACTTCGGAATATTACCAAAAGGTGTTCGTATTCCTCCGTCTGGGCCAAGTCAAAGAACTTCAGACTATCCACCTCCCCCACAACATGTCTCCATCATTTTACATAAAGAATCGATGATCAACTTTGGGATATTACCAAAAGGTATGCGTATTCCTCCATCTGGACCGAGTACAAGAGCCTCATATCCACCTCCTCCACTACATGGTCCTATTATTTGA ATGAGACGACGACGTGTAGCGGTCGCCATAATCGTGCTGTTGGCGTTGATTATGGACACTTTCTTCTCTGTTGATGGAAGACATTTTAAGTTGCAAGATATGAAAGGCAAGAGAAGAATCCAACTGTTGCACTATGGAATCTATCGAGCAAATGCTAAAAACGTTCTTGTAGTCGATAAAGATGTCTCTATTCTAGAAAATGAATCGAGGGACCACATCATAAAGCATCCAAAAAGTCATATCCATTTCTCACTCGTGAAACACAAGAGAATACTTGACTTAGCTCCACCGTATGAGCCGAGTCAAAGAACTTCAGACAATCCACCTCCACCACTACATATTCCATCTAAGATTAACTTCGGAATATTACCAAAAGGTTTTCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCAGACAATCCACCTCCACCACTGCATGTTCCATCTAGGATTAACTTCGAAATATTACCAAAAGGTGTTCGTATTCCTCCATCTGGGCCGAGTCAAAGAACTTCAGACTCTTCACCTCCCCCATCGCATGTCCCATCTAGGATTAACTTTGGAAATTTACCAAAAGGTGTTCGTATTCCTTCGTGTGGACCGAGTCAAATAACTTCAGAAAATCCACCTCCCCCACACCATGTCCTATCAAGGATTAACTTTGGAATATTACCAAAAGGTCATCACATTCCTCCATCTGGGCCAAGTCAAAGAACTTCTGATTCTCCACCTCCCCCACCGCATGTCCCATCCAGGATTAACTTCGGAATTTTACCAAAAGGTGTTCGTATTCCTCCATCTGGGCCGAGTCAAAGAACTTCAGACAATCCACTTCCTACACCCCATATCCCATCTATGATTAACTTTGGAATATTACCAAAAAGTATTCATATTCCTTCGTCTCGGCCAAGTCAAAGAACTTCAGACAATCCACCACCCCCATCGCATATCCCGTCTAGGATTAACTTTGGAATATTACCAAAAGGTCTTCGGATTCCTCGGTCTAGGCCGAGTCAAAGAAATTCAGATTCTCCACCTCCCCCACTGCACGTTCAATCTAGGATTAACTTCGGAATATTACCAAAAGGTGTTCGTATTCCTCCGTCTGGGCCAAGTCAAAGAACTTCAGACTATCCACCTCCCCCACAACATGTCTCCATCATTTTACATAAAGAATCGATGATCAACTTTGGGATATTACCAAAAGGTATGCGTATTCCTCCATCTGGACCGAGTACAAGAGCCTCATATCCACCTCCTCCACTACATGGTCCTATTATTTGA MRRRRVAVAIIVLLALIMDTFFSVDGRHFKLQDMKGKRRIQLLHYGIYRANAKNVLVVDKDVSILENESRDHIIKHPKSHIHFSLVKHKRILDLAPPYEPSQRTSDNPPPPLHIPSKINFGILPKGFRIPPSGPSQRTSDNPPPPLHVPSRINFEILPKGVRIPPSGPSQRTSDSSPPPSHVPSRINFGNLPKGVRIPSCGPSQITSENPPPPHHVLSRINFGILPKGHHIPPSGPSQRTSDSPPPPPHVPSRINFGILPKGVRIPPSGPSQRTSDNPLPTPHIPSMINFGILPKSIHIPSSRPSQRTSDNPPPPSHIPSRINFGILPKGLRIPRSRPSQRNSDSPPPPLHVQSRINFGILPKGVRIPPSGPSQRTSDYPPPPQHVSIILHKESMINFGILPKGMRIPPSGPSTRASYPPPPLHGPII Homology
BLAST of Clc03G08880 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 302.8 bits (774), Expect = 4.8e-78 Identity = 191/374 (51.07%), Postives = 219/374 (58.56%), Query Frame = 0
BLAST of Clc03G08880 vs. NCBI nr
Match: XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima]) HSP 1 Score: 284.3 bits (726), Expect = 1.8e-72 Identity = 188/368 (51.09%), Postives = 219/368 (59.51%), Query Frame = 0
BLAST of Clc03G08880 vs. NCBI nr
Match: XP_021800387.1 (formin-like protein 5, partial [Prunus avium]) HSP 1 Score: 280.4 bits (716), Expect = 2.6e-71 Identity = 183/325 (56.31%), Postives = 187/325 (57.54%), Query Frame = 0
BLAST of Clc03G08880 vs. NCBI nr
Match: XP_021800922.1 (formin-like protein 5 [Prunus avium]) HSP 1 Score: 278.1 bits (710), Expect = 1.3e-70 Identity = 180/320 (56.25%), Postives = 182/320 (56.88%), Query Frame = 0
BLAST of Clc03G08880 vs. NCBI nr
Match: XP_031744042.1 (proline-rich receptor-like protein kinase PERK9 [Cucumis sativus]) HSP 1 Score: 274.6 bits (701), Expect = 1.4e-69 Identity = 184/368 (50.00%), Postives = 214/368 (58.15%), Query Frame = 0
BLAST of Clc03G08880 vs. ExPASy Swiss-Prot
Match: P05143 (Proline-rich protein 2 OS=Mus musculus OX=10090 GN=Prp2 PE=2 SV=2) HSP 1 Score: 75.9 bits (185), Expect = 1.3e-12 Identity = 96/301 (31.89%), Postives = 106/301 (35.22%), Query Frame = 0
BLAST of Clc03G08880 vs. ExPASy Swiss-Prot
Match: Q9C660 (Proline-rich receptor-like protein kinase PERK10 OS=Arabidopsis thaliana OX=3702 GN=PERK10 PE=1 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 5.5e-08 Identity = 91/312 (29.17%), Postives = 114/312 (36.54%), Query Frame = 0
BLAST of Clc03G08880 vs. ExPASy Swiss-Prot
Match: Q84ZL0 (Formin-like protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=FH5 PE=2 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 1.2e-07 Identity = 99/341 (29.03%), Postives = 114/341 (33.43%), Query Frame = 0
BLAST of Clc03G08880 vs. ExPASy Swiss-Prot
Match: Q9C6S1 (Formin-like protein 14 OS=Arabidopsis thaliana OX=3702 GN=FH14 PE=3 SV=3) HSP 1 Score: 55.1 bits (131), Expect = 2.3e-06 Identity = 90/305 (29.51%), Postives = 112/305 (36.72%), Query Frame = 0
BLAST of Clc03G08880 vs. ExPASy Swiss-Prot
Match: Q9SN46 (Leucine-rich repeat extensin-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=LRX5 PE=2 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 2.3e-06 Identity = 98/348 (28.16%), Postives = 127/348 (36.49%), Query Frame = 0
BLAST of Clc03G08880 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 8.6e-73 Identity = 188/368 (51.09%), Postives = 219/368 (59.51%), Query Frame = 0
BLAST of Clc03G08880 vs. ExPASy TrEMBL
Match: A0A6P5RC98 (formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110744709 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.2e-71 Identity = 183/325 (56.31%), Postives = 187/325 (57.54%), Query Frame = 0
BLAST of Clc03G08880 vs. ExPASy TrEMBL
Match: A0A6P5RDM4 (formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110745147 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 6.2e-71 Identity = 180/320 (56.25%), Postives = 182/320 (56.88%), Query Frame = 0
BLAST of Clc03G08880 vs. ExPASy TrEMBL
Match: A0A2P5WMU6 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA28257 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 2.3e-57 Identity = 172/362 (47.51%), Postives = 192/362 (53.04%), Query Frame = 0
BLAST of Clc03G08880 vs. ExPASy TrEMBL
Match: A0A1S2Y3N8 (proline-rich protein 2-like OS=Cicer arietinum OX=3827 GN=LOC101510047 PE=4 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 3.3e-56 Identity = 155/304 (50.99%), Postives = 201/304 (66.12%), Query Frame = 0
BLAST of Clc03G08880 vs. TAIR 10
Match: AT1G26150.1 (proline-rich extensin-like receptor kinase 10 ) HSP 1 Score: 60.5 bits (145), Expect = 3.9e-09 Identity = 91/312 (29.17%), Postives = 114/312 (36.54%), Query Frame = 0
BLAST of Clc03G08880 vs. TAIR 10
Match: AT1G31810.1 (Formin Homology 14 ) HSP 1 Score: 55.1 bits (131), Expect = 1.6e-07 Identity = 90/305 (29.51%), Postives = 112/305 (36.72%), Query Frame = 0
BLAST of Clc03G08880 vs. TAIR 10
Match: AT4G18670.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 55.1 bits (131), Expect = 1.6e-07 Identity = 98/348 (28.16%), Postives = 127/348 (36.49%), Query Frame = 0
BLAST of Clc03G08880 vs. TAIR 10
Match: AT1G68690.1 (Protein kinase superfamily protein ) HSP 1 Score: 52.4 bits (124), Expect = 1.1e-06 Identity = 66/220 (30.00%), Postives = 87/220 (39.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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