Clc03G08700 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G08700
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	non-classical arabinogalactan protein 31
Location	ClcChr03: 8951334 .. 8952223 (-)
RNA-Seq Expression	Clc03G08700
Synteny	Clc03G08700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTGTTACTGCCAACGTCTCTTTCCTTCTTCTTCTCCTCTGCTGCAGCCTCAATGCCTTCCAAACCGCCGCATACCACGGAACCCCTGCTCCGGCACCAAGTCACCACGACGGCGGCCACCAGCCAGTAGCTGCCCCAACTCCAAGCTTCCACCACCACCACCACCACCACCCGCCGAGCCAGTCTCCGGTTTCCCACCACCACCATCCTCATTCCCCTTCCCCTGCTCCTTCCCCTGTTTACCCACCTCCCCCTCCGGCTCACTACGCCCCGGTTCCGTCACCGGTTCGACCACCCAAACCGTCCTCCTACGTCCCAAGAAGCTTCGTTGAAGTCCAAGGCGTTGTTTACTGCAAGTCTTGCAAGTACCCTGGCGTCGATACCCTTCTCGGAGCTAAACCCCTTTCCGGTAAGTTCCAAGATCGCATTTTTACTGTAAACCCACATAAGTTTTAGCGGTAATTTTACAAATTATTTCGAAAGTTGAAATGGGTATTTTTTTTTTTATTTGTTCGCAAAAGTTGTGCATTAACACTGCCCACTACCCGAAATGGCCTTTATTGCTCTGTTTTCTTGCAGGTGCTACAGTGAAGCTATCATGCAAGAACACCAAGTACGCTCCGACAGTGGAAACCGCCACCAGCGACAAGAATGGTTACTTCCGGCTAGCGGCGCCGAAGAATGTGACGAGCTACGCATTCCACCGCTGCAAGGTTTATCTGGTGAAGTCGCCGGATAGCAGTTGCAGTAAGGCGTCGAAACTGAACGGCGGAGAGGACGGAGCGGAGTTGAAGCCGGCGAGGGCATTCACGGATGACGAGAAAAAGCCTGTTGTGCTTTACAATGTTGGACCATTGGCTTTTGAACCCACCTGCAGTCATTGA

mRNA sequence

ATGGCTTCTGTTACTGCCAACGTCTCTTTCCTTCTTCTTCTCCTCTGCTGCAGCCTCAATGCCTTCCAAACCGCCGCATACCACGGAACCCCTGCTCCGGCACCAAGTCACCACGACGGCGGCCACCAGCCAGTAGCTGCCCCAACTCCAAGCTTCCACCACCACCACCACCACCACCCGCCGAGCCAGTCTCCGGTTTCCCACCACCACCATCCTCATTCCCCTTCCCCTGCTCCTTCCCCTGTTTACCCACCTCCCCCTCCGGCTCACTACGCCCCGGTTCCGTCACCGGTTCGACCACCCAAACCGTCCTCCTACGTCCCAAGAAGCTTCGTTGAAGTCCAAGGCGTTGTTTACTGCAAGTCTTGCAAGTACCCTGGCGTCGATACCCTTCTCGGAGCTAAACCCCTTTCCGGTGCTACAGTGAAGCTATCATGCAAGAACACCAAGTACGCTCCGACAGTGGAAACCGCCACCAGCGACAAGAATGGTTACTTCCGGCTAGCGGCGCCGAAGAATGTGACGAGCTACGCATTCCACCGCTGCAAGGTTTATCTGGTGAAGTCGCCGGATAGCAGTTGCAGTAAGGCGTCGAAACTGAACGGCGGAGAGGACGGAGCGGAGTTGAAGCCGGCGAGGGCATTCACGGATGACGAGAAAAAGCCTGTTGTGCTTTACAATGTTGGACCATTGGCTTTTGAACCCACCTGCAGTCATTGA

Coding sequence (CDS)

ATGGCTTCTGTTACTGCCAACGTCTCTTTCCTTCTTCTTCTCCTCTGCTGCAGCCTCAATGCCTTCCAAACCGCCGCATACCACGGAACCCCTGCTCCGGCACCAAGTCACCACGACGGCGGCCACCAGCCAGTAGCTGCCCCAACTCCAAGCTTCCACCACCACCACCACCACCACCCGCCGAGCCAGTCTCCGGTTTCCCACCACCACCATCCTCATTCCCCTTCCCCTGCTCCTTCCCCTGTTTACCCACCTCCCCCTCCGGCTCACTACGCCCCGGTTCCGTCACCGGTTCGACCACCCAAACCGTCCTCCTACGTCCCAAGAAGCTTCGTTGAAGTCCAAGGCGTTGTTTACTGCAAGTCTTGCAAGTACCCTGGCGTCGATACCCTTCTCGGAGCTAAACCCCTTTCCGGTGCTACAGTGAAGCTATCATGCAAGAACACCAAGTACGCTCCGACAGTGGAAACCGCCACCAGCGACAAGAATGGTTACTTCCGGCTAGCGGCGCCGAAGAATGTGACGAGCTACGCATTCCACCGCTGCAAGGTTTATCTGGTGAAGTCGCCGGATAGCAGTTGCAGTAAGGCGTCGAAACTGAACGGCGGAGAGGACGGAGCGGAGTTGAAGCCGGCGAGGGCATTCACGGATGACGAGAAAAAGCCTGTTGTGCTTTACAATGTTGGACCATTGGCTTTTGAACCCACCTGCAGTCATTGA

Protein sequence

MASVTANVSFLLLLLCCSLNAFQTAAYHGTPAPAPSHHDGGHQPVAAPTPSFHHHHHHHPPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYAPVPSPVRPPKPSSYVPRSFVEVQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNVTSYAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLAFEPTCSH

Homology

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BLAST of Clc03G08700 vs. NCBI nr
Match: XP_038876988.1 (non-classical arabinogalactan protein 31 [Benincasa hispida])

HSP 1 Score: 411.0 bits (1055), Expect = 7.1e-111
Identity = 220/243 (90.53%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 1   MASVTANVSFLLLLLCCSLNAFQTAAYHGTPAPAPSHHDGGHQPVAAPTPSFHH--HHHH 60
           MASVTAN SFL+LLLCCS+NAFQTAAYHGTPAPAPSHH GGH PVAAPTPSFHH  HH H
Sbjct: 1   MASVTANASFLVLLLCCSINAFQTAAYHGTPAPAPSHH-GGHHPVAAPTPSFHHHRHHRH 60

Query: 61  HPPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYA----PVPSPVRPPKPSSYVPRSFVEV 120
           H PS SP+S HHHPH  SPAPSPVYP PP AHYA    PVPSPV P KPS+YVPRSFVEV
Sbjct: 61  HAPSPSPIS-HHHPH--SPAPSPVYPSPPTAHYAPVPSPVPSPVPPSKPSTYVPRSFVEV 120

Query: 121 QGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNV 180
           QGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNV
Sbjct: 121 QGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNV 180

Query: 181 TSYAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLAFE 238
           TSYAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLAFE
Sbjct: 181 TSYAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLAFE 239

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BLAST of Clc03G08700 vs. NCBI nr
Match: XP_008442660.1 (PREDICTED: non-classical arabinogalactan protein 31 [Cucumis melo] >KAA0056996.1 non-classical arabinogalactan protein 31 [Cucumis melo var. makuwa] >TYK26423.1 non-classical arabinogalactan protein 31 [Cucumis melo var. makuwa])

HSP 1 Score: 399.8 bits (1026), Expect = 1.6e-107
Identity = 215/246 (87.40%), Postives = 222/246 (90.24%), Query Frame = 0


Query: 1   MASVTANVSFL-LLLLCCSLNAFQTAAYHGTPAPAPSHHDGGHQPVAAPTPSFH---HHH 60
           MAS+TAN SFL LLLLCCSLNAFQ AAY  TPAPAP+HH+  H PVAAP PSFH   HHH
Sbjct: 1   MASLTANASFLVLLLLCCSLNAFQAAAYSSTPAPAPTHHN-AHHPVAAPAPSFHHHGHHH 60

Query: 61  HHHPPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYA----PVPSPVRPPKPSSYVPRSFV 120
           HHH PSQSP S HHHPHSPSPAPSPVYP PP AHYA    PVPSPV  PKPS+YVPRSFV
Sbjct: 61  HHHSPSQSPTS-HHHPHSPSPAPSPVYPFPPTAHYAPVPSPVPSPVHSPKPSTYVPRSFV 120

Query: 121 EVQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPK 180
           EVQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPK
Sbjct: 121 EVQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPK 180

Query: 181 NVTSYAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLA 239
           NVTSYAFHRCKVYLV+SPDS+C KASKLNGGEDGAELKPARAFTD+EKKPVVLYNVGPLA
Sbjct: 181 NVTSYAFHRCKVYLVESPDSNCKKASKLNGGEDGAELKPARAFTDEEKKPVVLYNVGPLA 240

[Close]

BLAST of Clc03G08700 vs. NCBI nr
Match: XP_004146606.2 (non-classical arabinogalactan protein 31 [Cucumis sativus] >KGN64686.1 hypothetical protein Csa_013639 [Cucumis sativus])

HSP 1 Score: 390.2 bits (1001), Expect = 1.3e-104
Identity = 206/242 (85.12%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MASVTANVSFLLLLLCCS-LNAFQTAAYHGTPAPAPSHHDGGHQPVAAPTPSFH---HHH 60
           MAS+TAN SFLLLLLCC+ LNAFQ AAY  TPAPAP+HH+  H PVAAPTPSFH   HHH
Sbjct: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHN-AHHPVAAPTPSFHHRGHHH 60

Query: 61  HHHPPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYAPVPSPVRPPKPSSYVPRSFVEVQG 120
           HHH P+QSP S HHHPHSPSPAPSPVYP  PPAHYAPVPSP   PKPS+ +PRSFV+VQG
Sbjct: 61  HHHSPTQSPTS-HHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQG 120

Query: 121 VVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNVTS 180
           VVYCKSCKYP VDTLLGAKPLSGATVKLSCKNTKYAP VETATSD+NGYFRLAAPKNVTS
Sbjct: 121 VVYCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTS 180

Query: 181 YAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLAFEPT 239
           YAFHRCKVYLVKSPDS C KASK+NGG DGAELKPARAFTD+EKKPVVLYNVGPLAFEPT
Sbjct: 181 YAFHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPT 240

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BLAST of Clc03G08700 vs. NCBI nr
Match: KAG7019613.1 (Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 360.5 bits (924), Expect = 1.1e-95
Identity = 192/239 (80.33%), Postives = 209/239 (87.45%), Query Frame = 0


Query: 1   MASVTANVSFLLLLLCCSLNAFQTAAYHGTPAPAPSHHDGGHQ-PVAAPTPSFHHHHHHH 60
           M SV A  + ++LLL C+LNAFQ AA HG+P  AP   D  +  PVAAP+   HHHHHHH
Sbjct: 1   MGSV-ATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHH 60

Query: 61  PPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYAPVPSPVRPPKPSSYVPRSFVEVQGVVY 120
           PPSQSP+ HH   HS SPAPSPVY PPPPAHYAPVPSPV+PPK S+Y+PRSFVEVQGVVY
Sbjct: 61  PPSQSPIYHH---HSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVY 120

Query: 121 CKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNVTSYAF 180
           CKSC YPGVDTLLGAKPL+GATVKLSCKNTKYAPTVETAT+DKNGYFRLAAPKNVTSYAF
Sbjct: 121 CKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAF 180

Query: 181 HRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLAFEPTCS 239
           HRCKVYLVKSPDSSC+K SK+NGGEDGAELKPA+AFTD EKKPVVLYNVGPLAFEPTC+
Sbjct: 181 HRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCA 235

[Close]

BLAST of Clc03G08700 vs. NCBI nr
Match: XP_022927607.1 (non-classical arabinogalactan protein 31-like [Cucurbita moschata])

HSP 1 Score: 359.4 bits (921), Expect = 2.4e-95
Identity = 191/239 (79.92%), Postives = 209/239 (87.45%), Query Frame = 0


Query: 1   MASVTANVSFLLLLLCCSLNAFQTAAYHGTPAPAPSHHDGGHQ-PVAAPTPSFHHHHHHH 60
           M SV A  + ++LLL C+LNAFQ AA HG+P  AP   D  +  PVAAP+   HHHHHHH
Sbjct: 1   MGSV-ATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHH 60

Query: 61  PPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYAPVPSPVRPPKPSSYVPRSFVEVQGVVY 120
           PPSQSP+ HH   HS SPAPSPVY PPPPAHYAPVPSPV+PPK S+Y+PRSFVEVQGVVY
Sbjct: 61  PPSQSPIYHH---HSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVY 120

Query: 121 CKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNVTSYAF 180
           CKSC YPGVDTLLGAKPL+GATVKLSCKNTKYAPT+ETAT+DKNGYFRLAAPKNVTSYAF
Sbjct: 121 CKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTMETATTDKNGYFRLAAPKNVTSYAF 180

Query: 181 HRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLAFEPTCS 239
           HRCKVYLVKSPDSSC+K SK+NGGEDGAELKPA+AFTD EKKPVVLYNVGPLAFEPTC+
Sbjct: 181 HRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCA 235

[Close]

BLAST of Clc03G08700 vs. ExPASy Swiss-Prot
Match: Q9FZA2 (Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP31 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.6e-35
Identity = 97/186 (52.15%), Postives = 113/186 (60.75%), Query Frame = 0


Query: 60  PPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYAPVPSPVRPP-KPSSYVP---RSFVEVQ 119
           PP++ PV     P +  P   PVYPP       PV  P +PP  P  Y P   RS V V+
Sbjct: 174 PPTKPPVKPPVSPPAKPPVKPPVYPPTKAPVKPPVSPPTKPPVTPPVYPPKFNRSLVAVR 233

Query: 120 GVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNVT 179
           G VYCKSCKY   +TLLGAKP+ GATVKL CK+ K   T ET T+DKNGYF L APK VT
Sbjct: 234 GTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKNI-TAET-TTDKNGYFLLLAPKTVT 293

Query: 180 SYAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDD----EKKPVVLYNVGPL 238
           ++ F  C+VYLVKS D  CSK SKL GG+ GAELKP +          K    L+NVGP 
Sbjct: 294 NFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKPEKKLGKSTVVVNKLVYGLFNVGPF 353

[Close]

BLAST of Clc03G08700 vs. ExPASy Swiss-Prot
Match: P93013 (Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP30 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-27
Identity = 94/248 (37.90%), Postives = 130/248 (52.42%), Query Frame = 0


Query: 1   MASVTANVSFLLLLLCCSLNAFQTAAYHGTPAPAPSHHDGGH---QPVAAPTPSFHHHHH 60
           M  +  +VS  L  L C  ++  T   +   +  P H    H    P+  PT        
Sbjct: 1   MGIIGKSVSLTLFALLCFTSSVFTLGVNQPGSSDPFHSLPQHLPLPPIKLPT-------- 60

Query: 61  HHPPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYAPVPSPVRPP-KPSSYVP---RSFVE 120
             PP+++P+    +P + +P   P  PP       P   P++PP  P  Y P   ++ V 
Sbjct: 61  -LPPAKAPIKLPAYPPAKAPIKLPTLPPAKAPIKLPTLPPIKPPVLPPVYPPKYNKTLVA 120

Query: 121 VQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKN 180
           V+GVVYCK+CKY GV+ + GAKP+  A V+L CKN K   ++    +DKNGYF L APK 
Sbjct: 121 VRGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKK--NSISETKTDKNGYFMLLAPKT 180

Query: 181 VTSYAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPA--RAFTDDEKK--PVVLYNVG 238
           VT+Y    C+ +LVKSPD+ CSK S L+ G  G+ LKP     F+    +     +YNVG
Sbjct: 181 VTNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVLKPGFSSTIMRWFKYSVYNVG 237

[Close]

BLAST of Clc03G08700 vs. ExPASy Swiss-Prot
Match: Q03211 (Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.2e-17
Identity = 89/241 (36.93%), Postives = 110/241 (45.64%), Query Frame = 0


Query: 31  PAPAPSHH-DGGHQPVAAPTPSFHHHHHHHPPSQSPVSHHHHPHSPSPAPSPVYPPPPPA 90
           P+P+P+        PV AP+PS        PP++ P      P  P    SP+ PPPPP 
Sbjct: 189 PSPSPAKQPPPPPPPVKAPSPS----PATQPPTKQP------PPPPRAKKSPLLPPPPPV 248

Query: 91  HYAPV----PSPV----------RPPKPSSYVPRSFVE--------------VQGVVYCK 150
            Y PV    PSP            PP     +PR                  V G+VYCK
Sbjct: 249 AYPPVMTPSPSPAAEPPIIAPFPSPPANPPLIPRRPAPPVVKPLPPLGKPPIVSGLVYCK 308

Query: 151 SCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNVTSYAFHR 210
           SC   GV TLL A  L GA VKL C   K    V+ AT+D  G FR+  PK++T+    +
Sbjct: 309 SCNSYGVPTLLNASLLQGAVVKLICYGKK--TMVQWATTDNKGEFRI-MPKSLTTADVGK 368

Query: 211 CKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVV--------LYNVGPLAF 235
           CKVYLVKSP+ +C+  +  NGG+ G  LKP           VV        LY VGP  F
Sbjct: 369 CKVYLVKSPNPNCNVPTNFNGGKSGGLLKPLLPPKQPITPAVVPVQPPMSDLYGVGPFIF 416

[Close]

BLAST of Clc03G08700 vs. ExPASy TrEMBL
Match: A0A5A7URZ5 (Non-classical arabinogalactan protein 31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00870 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.9e-108
Identity = 215/246 (87.40%), Postives = 222/246 (90.24%), Query Frame = 0


Query: 1   MASVTANVSFL-LLLLCCSLNAFQTAAYHGTPAPAPSHHDGGHQPVAAPTPSFH---HHH 60
           MAS+TAN SFL LLLLCCSLNAFQ AAY  TPAPAP+HH+  H PVAAP PSFH   HHH
Sbjct: 1   MASLTANASFLVLLLLCCSLNAFQAAAYSSTPAPAPTHHN-AHHPVAAPAPSFHHHGHHH 60

Query: 61  HHHPPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYA----PVPSPVRPPKPSSYVPRSFV 120
           HHH PSQSP S HHHPHSPSPAPSPVYP PP AHYA    PVPSPV  PKPS+YVPRSFV
Sbjct: 61  HHHSPSQSPTS-HHHPHSPSPAPSPVYPFPPTAHYAPVPSPVPSPVHSPKPSTYVPRSFV 120

Query: 121 EVQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPK 180
           EVQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPK
Sbjct: 121 EVQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPK 180

Query: 181 NVTSYAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLA 239
           NVTSYAFHRCKVYLV+SPDS+C KASKLNGGEDGAELKPARAFTD+EKKPVVLYNVGPLA
Sbjct: 181 NVTSYAFHRCKVYLVESPDSNCKKASKLNGGEDGAELKPARAFTDEEKKPVVLYNVGPLA 240

[Close]

BLAST of Clc03G08700 vs. ExPASy TrEMBL
Match: A0A1S3B5Q3 (non-classical arabinogalactan protein 31 OS=Cucumis melo OX=3656 GN=LOC103486459 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 7.9e-108
Identity = 215/246 (87.40%), Postives = 222/246 (90.24%), Query Frame = 0


Query: 1   MASVTANVSFL-LLLLCCSLNAFQTAAYHGTPAPAPSHHDGGHQPVAAPTPSFH---HHH 60
           MAS+TAN SFL LLLLCCSLNAFQ AAY  TPAPAP+HH+  H PVAAP PSFH   HHH
Sbjct: 1   MASLTANASFLVLLLLCCSLNAFQAAAYSSTPAPAPTHHN-AHHPVAAPAPSFHHHGHHH 60

Query: 61  HHHPPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYA----PVPSPVRPPKPSSYVPRSFV 120
           HHH PSQSP S HHHPHSPSPAPSPVYP PP AHYA    PVPSPV  PKPS+YVPRSFV
Sbjct: 61  HHHSPSQSPTS-HHHPHSPSPAPSPVYPFPPTAHYAPVPSPVPSPVHSPKPSTYVPRSFV 120

Query: 121 EVQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPK 180
           EVQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPK
Sbjct: 121 EVQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPK 180

Query: 181 NVTSYAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLA 239
           NVTSYAFHRCKVYLV+SPDS+C KASKLNGGEDGAELKPARAFTD+EKKPVVLYNVGPLA
Sbjct: 181 NVTSYAFHRCKVYLVESPDSNCKKASKLNGGEDGAELKPARAFTDEEKKPVVLYNVGPLA 240

[Close]

BLAST of Clc03G08700 vs. ExPASy TrEMBL
Match: A0A0A0LXF0 (Structural constituent of cell wall OS=Cucumis sativus OX=3659 GN=Csa_1G074910 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 6.2e-105
Identity = 206/242 (85.12%), Postives = 217/242 (89.67%), Query Frame = 0


Query: 1   MASVTANVSFLLLLLCCS-LNAFQTAAYHGTPAPAPSHHDGGHQPVAAPTPSFH---HHH 60
           MAS+TAN SFLLLLLCC+ LNAFQ AAY  TPAPAP+HH+  H PVAAPTPSFH   HHH
Sbjct: 1   MASLTANASFLLLLLCCTLLNAFQAAAYSSTPAPAPTHHN-AHHPVAAPTPSFHHRGHHH 60

Query: 61  HHHPPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYAPVPSPVRPPKPSSYVPRSFVEVQG 120
           HHH P+QSP S HHHPHSPSPAPSPVYP  PPAHYAPVPSP   PKPS+ +PRSFV+VQG
Sbjct: 61  HHHSPTQSPTS-HHHPHSPSPAPSPVYPLHPPAHYAPVPSPAHSPKPSTNIPRSFVQVQG 120

Query: 121 VVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNVTS 180
           VVYCKSCKYP VDTLLGAKPLSGATVKLSCKNTKYAP VETATSD+NGYFRLAAPKNVTS
Sbjct: 121 VVYCKSCKYPDVDTLLGAKPLSGATVKLSCKNTKYAPAVETATSDENGYFRLAAPKNVTS 180

Query: 181 YAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLAFEPT 239
           YAFHRCKVYLVKSPDS C KASK+NGG DGAELKPARAFTD+EKKPVVLYNVGPLAFEPT
Sbjct: 181 YAFHRCKVYLVKSPDSKCEKASKMNGGVDGAELKPARAFTDEEKKPVVLYNVGPLAFEPT 240

[Close]

BLAST of Clc03G08700 vs. ExPASy TrEMBL
Match: A0A6J1EHN2 (non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111434378 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.2e-95
Identity = 191/239 (79.92%), Postives = 209/239 (87.45%), Query Frame = 0


Query: 1   MASVTANVSFLLLLLCCSLNAFQTAAYHGTPAPAPSHHDGGHQ-PVAAPTPSFHHHHHHH 60
           M SV A  + ++LLL C+LNAFQ AA HG+P  AP   D  +  PVAAP+   HHHHHHH
Sbjct: 1   MGSV-ATGAVIVLLLGCALNAFQAAASHGSPTLAPRPDDRHYPVPVAAPSHHHHHHHHHH 60

Query: 61  PPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYAPVPSPVRPPKPSSYVPRSFVEVQGVVY 120
           PPSQSP+ HH   HS SPAPSPVY PPPPAHYAPVPSPV+PPK S+Y+PRSFVEVQGVVY
Sbjct: 61  PPSQSPIYHH---HSHSPAPSPVYAPPPPAHYAPVPSPVQPPKRSTYIPRSFVEVQGVVY 120

Query: 121 CKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNVTSYAF 180
           CKSC YPGVDTLLGAKPL+GATVKLSCKNTKYAPT+ETAT+DKNGYFRLAAPKNVTSYAF
Sbjct: 121 CKSCHYPGVDTLLGAKPLNGATVKLSCKNTKYAPTMETATTDKNGYFRLAAPKNVTSYAF 180

Query: 181 HRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLAFEPTCS 239
           HRCKVYLVKSPDSSC+K SK+NGGEDGAELKPA+AFTD EKKPVVLYNVGPLAFEPTC+
Sbjct: 181 HRCKVYLVKSPDSSCNKMSKMNGGEDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPTCA 235

[Close]

BLAST of Clc03G08700 vs. ExPASy TrEMBL
Match: A0A6J1KM21 (non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC111495792 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.9e-91
Identity = 187/239 (78.24%), Postives = 204/239 (85.36%), Query Frame = 0


Query: 1   MASVTANVSFLLLLLCCSLNAFQTAAYHGTPAPAPSHHDGGHQPVAAPTPSFHHHHHHHP 60
           M SV A  + ++LLL C+LNAFQ AA HG+P PAP   D  H PV    PS HHHHHHHP
Sbjct: 1   MGSV-ATCAVIVLLLGCALNAFQAAANHGSPTPAP-RPDDRHYPVPVAAPS-HHHHHHHP 60

Query: 61  PSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYAPVPSPVRPPKPSSYVPRSFVEVQGVVYC 120
           PSQSP+ +HHH H  SPAPSPVY PPPPAHYA    PV+PPK S+Y+PRSFVEVQGVVYC
Sbjct: 61  PSQSPI-YHHHAH--SPAPSPVYAPPPPAHYA----PVQPPKRSTYIPRSFVEVQGVVYC 120

Query: 121 KSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNVTSYAFH 180
           KSC YPGVDTLLGAKPL+GA VKLSCKNTKYAPTVETAT+DKNGYFRLAAPKNVTSYAFH
Sbjct: 121 KSCHYPGVDTLLGAKPLNGAAVKLSCKNTKYAPTVETATTDKNGYFRLAAPKNVTSYAFH 180

Query: 181 RCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLAFEPTCSH 240
           RCKV+LVKSPDSSCSK SK+NGG DGAELKPA+AFTD EKKPVVLYNVGPLAFEP+C+H
Sbjct: 181 RCKVHLVKSPDSSCSKMSKMNGGVDGAELKPAKAFTDAEKKPVVLYNVGPLAFEPSCAH 229

[Close]

BLAST of Clc03G08700 vs. TAIR 10
Match: AT1G28290.1 (arabinogalactan protein 31 )

HSP 1 Score: 149.1 bits (375), Expect = 4.7e-36
Identity = 97/186 (52.15%), Postives = 113/186 (60.75%), Query Frame = 0


Query: 60  PPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYAPVPSPVRPP-KPSSYVP---RSFVEVQ 119
           PP++ PV     P +  P   PVYPP       PV  P +PP  P  Y P   RS V V+
Sbjct: 174 PPTKPPVKPPVSPPAKPPVKPPVYPPTKAPVKPPVSPPTKPPVTPPVYPPKFNRSLVAVR 233

Query: 120 GVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKNVT 179
           G VYCKSCKY   +TLLGAKP+ GATVKL CK+ K   T ET T+DKNGYF L APK VT
Sbjct: 234 GTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKNI-TAET-TTDKNGYFLLLAPKTVT 293

Query: 180 SYAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPARAFTDD----EKKPVVLYNVGPL 238
           ++ F  C+VYLVKS D  CSK SKL GG+ GAELKP +          K    L+NVGP 
Sbjct: 294 NFGFRGCRVYLVKSKDYKCSKVSKLFGGDVGAELKPEKKLGKSTVVVNKLVYGLFNVGPF 353

[Close]

BLAST of Clc03G08700 vs. TAIR 10
Match: AT1G28290.2 (arabinogalactan protein 31 )

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-34
Identity = 123/309 (39.81%), Postives = 144/309 (46.60%), Query Frame = 0


Query: 11  LLLLLCCSLNAFQTAAYHGT------PAPAPSHHDGGHQPVAAPTPSFHHHHHHH----- 70
           L+ L C + + F     H T      PAPAP HH   H     P P  HHH H H     
Sbjct: 12  LVALWCFTSSVFTEEVNHKTQTPSLAPAPAPYHHGHHH-----PHPPHHHHPHPHPHPHP 71

Query: 71  -------PPSQSPVSHHHHP--------------------------------------HS 130
                  PP ++PVS    P                                      + 
Sbjct: 72  PAKSPVKPPVKAPVSPPAKPPVKPPVYPPTKAPVKPPTKPPVKPPVSPPAKPPVKPPVYP 131

Query: 131 PSPAP----------SPVYPPPPPAHYAPVPSPVRPP---------KPSSYVP---RSFV 190
           P+ AP           PVYPP  P  Y P  +PV+PP          P  Y P   RS V
Sbjct: 132 PTKAPVKPPTKPPVKPPVYPPTKPPVYPPTKAPVKPPVSPPTKPPVTPPVYPPKFNRSLV 191

Query: 191 EVQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPK 238
            V+G VYCKSCKY   +TLLGAKP+ GATVKL CK+ K   T ET T+DKNGYF L APK
Sbjct: 192 AVRGTVYCKSCKYAAFNTLLGAKPIEGATVKLVCKSKKNI-TAET-TTDKNGYFLLLAPK 251

[Close]

BLAST of Clc03G08700 vs. TAIR 10
Match: AT2G34700.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 143.3 bits (360), Expect = 2.6e-34
Identity = 76/147 (51.70%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 96  SPVRPPKPSSYVPRSFVEVQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTV 155
           SP+ PP   + + R  V V+G+VYCKSCKY GVDTLL A PL GATVKL+C NTK   T+
Sbjct: 30  SPMTPPSSPAKMSRRLVAVEGMVYCKSCKYSGVDTLLEASPLQGATVKLACNNTKRGVTM 89

Query: 156 ETATSDKNGYFRLAAPKNVTSYAFHRCKVYLVK----SPDSSCSKASKLNGGEDGAELKP 215
           ET T DKNGYF + APK +T+YAFH C+ +       +   +C+  SKLN G  GA LKP
Sbjct: 90  ETKT-DKNGYFFMLAPKKLTTYAFHTCRAWPTNPGPTTATMTCTVPSKLNNGITGAMLKP 149

Query: 216 ARAFTDDEKKPVVLYNVGPLAFEPTCS 239
           ++     E    VL++VGP AFEP C+
Sbjct: 150 SKTINIGE-HDYVLFSVGPFAFEPACA 174

[Close]

BLAST of Clc03G08700 vs. TAIR 10
Match: AT2G33790.1 (arabinogalactan protein 30 )

HSP 1 Score: 124.8 bits (312), Expect = 9.4e-29
Identity = 94/248 (37.90%), Postives = 130/248 (52.42%), Query Frame = 0


Query: 1   MASVTANVSFLLLLLCCSLNAFQTAAYHGTPAPAPSHHDGGH---QPVAAPTPSFHHHHH 60
           M  +  +VS  L  L C  ++  T   +   +  P H    H    P+  PT        
Sbjct: 1   MGIIGKSVSLTLFALLCFTSSVFTLGVNQPGSSDPFHSLPQHLPLPPIKLPT-------- 60

Query: 61  HHPPSQSPVSHHHHPHSPSPAPSPVYPPPPPAHYAPVPSPVRPP-KPSSYVP---RSFVE 120
             PP+++P+    +P + +P   P  PP       P   P++PP  P  Y P   ++ V 
Sbjct: 61  -LPPAKAPIKLPAYPPAKAPIKLPTLPPAKAPIKLPTLPPIKPPVLPPVYPPKYNKTLVA 120

Query: 121 VQGVVYCKSCKYPGVDTLLGAKPLSGATVKLSCKNTKYAPTVETATSDKNGYFRLAAPKN 180
           V+GVVYCK+CKY GV+ + GAKP+  A V+L CKN K   ++    +DKNGYF L APK 
Sbjct: 121 VRGVVYCKACKYAGVNNVQGAKPVKDAVVRLVCKNKK--NSISETKTDKNGYFMLLAPKT 180

Query: 181 VTSYAFHRCKVYLVKSPDSSCSKASKLNGGEDGAELKPA--RAFTDDEKK--PVVLYNVG 238
           VT+Y    C+ +LVKSPD+ CSK S L+ G  G+ LKP     F+    +     +YNVG
Sbjct: 181 VTNYDIKGCRAFLVKSPDTKCSKVSSLHDGGKGSVLKPVLKPGFSSTIMRWFKYSVYNVG 237

[Close]

BLAST of Clc03G08700 vs. TAIR 10
Match: AT5G05500.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.4e-10
Identity = 47/158 (29.75%), Postives = 68/158 (43.04%), Query Frame = 0


Query: 84  PPPPPAHYAPVPSPVRPPKPSSYVPRSFVEVQGVVYCKSCKYPGVDTLLGAKPLSGATVK 143
           PPPPP    P    V               V+G+VYC+SC   G  +L GA+ ++GA + 
Sbjct: 27  PPPPPTTAYPAVKTVE------------AAVEGMVYCQSCDKFGSWSLAGAEAIAGAKIS 86

Query: 144 LSCKNTKYAPT-VETATSDKNGYF-----RLAAPKNVTSYAFHRCKVYLVKSPDSSCSKA 203
           + CKN +   +  +   +D  G+F           +   +  H C+  LV SP   C+  
Sbjct: 87  IICKNHRQQVSFYKVFRTDSYGHFYGELKGFKMTPHFLDHPLHSCRAKLVSSPREDCNLF 146

Query: 204 SKLNGGEDGAELKPARAFTDDEKKPVVLYNVGPLAFEP 236
           S +N   DGA L+             V+Y  GPLAF P
Sbjct: 147 SNINNALDGAPLRYEEKRLKWTNYEAVIYAAGPLAFRP 172

The following BLAST results are available for this feature:

BLAST of Clc03G08700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876988.1	7.1e-111	90.53	non-classical arabinogalactan protein 31 [Benincasa hispida]	[more]
XP_008442660.1	1.6e-107	87.40	PREDICTED: non-classical arabinogalactan protein 31 [Cucumis melo] >KAA0056996.1...	[more]
XP_004146606.2	1.3e-104	85.12	non-classical arabinogalactan protein 31 [Cucumis sativus] >KGN64686.1 hypotheti...	[more]
KAG7019613.1	1.1e-95	80.33	Non-classical arabinogalactan protein 31, partial [Cucurbita argyrosperma subsp....	[more]
XP_022927607.1	2.4e-95	79.92	non-classical arabinogalactan protein 31-like [Cucurbita moschata]	[more]

BLAST of Clc03G08700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZA2	6.6e-35	52.15	Non-classical arabinogalactan protein 31 OS=Arabidopsis thaliana OX=3702 GN=AGP3...	[more]
P93013	1.3e-27	37.90	Non-classical arabinogalactan protein 30 OS=Arabidopsis thaliana OX=3702 GN=AGP3...	[more]
Q03211	6.2e-17	36.93	Pistil-specific extensin-like protein OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of Clc03G08700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7URZ5	7.9e-108	87.40	Non-classical arabinogalactan protein 31 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3B5Q3	7.9e-108	87.40	non-classical arabinogalactan protein 31 OS=Cucumis melo OX=3656 GN=LOC103486459...	[more]
A0A0A0LXF0	6.2e-105	85.12	Structural constituent of cell wall OS=Cucumis sativus OX=3659 GN=Csa_1G074910 P...	[more]
A0A6J1EHN2	1.2e-95	79.92	non-classical arabinogalactan protein 31-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1KM21	3.9e-91	78.24	non-classical arabinogalactan protein 31-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Clc03G08700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28290.1	4.7e-36	52.15	arabinogalactan protein 31	[more]
AT1G28290.2	2.0e-34	39.81	arabinogalactan protein 31	[more]
AT2G34700.1	2.6e-34	51.70	Pollen Ole e 1 allergen and extensin family protein	[more]
AT2G33790.1	9.4e-29	37.90	arabinogalactan protein 30	[more]
AT5G05500.1	3.4e-10	29.75	Pollen Ole e 1 allergen and extensin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF01190	Pollen_Ole_e_1	coord: 114..206 e-value: 7.1E-26 score: 90.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..66
None	No IPR available	PANTHER	PTHR33470:SF22	POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN	coord: 5..237
None	No IPR available	PANTHER	PTHR33470	OS01G0164075 PROTEIN	coord: 5..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G08700.1	Clc03G08700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0071944	cell periphery