Clc03G07540 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G07540
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	60S ribosomal protein L32, putative
Location	ClcChr03: 7799621 .. 7805310 (+)
RNA-Seq Expression	Clc03G07540
Synteny	Clc03G07540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAACCCTAATTGAACGGTCATTCTCTATATAAACCATTCAGAGCCTTGGAACATATCGTCGAAGCTTGGACGGCCAAAGCAAACCCTAGTTTCTGTGAGTACTCTCTATTCCGCCGCTAGGGTTTCTTTCTTTATCATCCTCTCTGAACTATGTTCATTTGCCCTAGAGTTTGATAAGATTTCATTACGTCGATTGAGTGTTTCTCAATTGTTTTTGTTAATTCAGTTTGGTTCTTCCAGCGTGTGAACTATCTTCTGTCATTGTGTAATTCAGGGTTGGATTTTAAGTTTTGAGGCTTTGGTACGTTTGTTTGAGCTGATGATGATCGTACTTGTTATGAAATCTGTAGGGTTAAGCGAAAATGGCGGTGCCTTTGCTGTCGAAGAAGATTGTGAAGAAGAGGACCAAGAAGTTCAAGAGGCCCCAGAGTGATCGAAAGATCTCCGTCAAGGTATTTTATGTTTCTTTGTCTTCTCGTCTTGTTTATGTGTGTATATGGTTGAATGTGCAATAAGGAAGATGATGATATGTATTGTCGCCCCAGTCTTAGTTGTATCTAATGATGCACAATGGTGACTGACAGTATCTGATTCTTGTTATAGTTAACAGCTCATTTATGGTATGATTTTAGAAGGTAGTTTCACTAGGTTTTCCGTCTGTAGTTTTAACTATATTTGCTGAGGCTCTTTTAGTAGGATCTGATGATAAAACAACACCCAGGCTGACTTGTGTCTTCGGATGCAGTCTGGTGAATCAAAGATCGACTATCTGATCCTTCTTTTGGAATTATATATTATTTAAATATTATTCAAGTAATTTAATTTGTTTTTATATCATGCGCTTGTTAAGTCGAATATTGTTCTTATTCCTGGTAGAAAGGATAATTTTTTGAGGCTCAGTCTCTTGGTGGAAGATGGTGATGTTATCATTTACATGTTCCCATCAAAGAGTATTTCTCGATACTCAACTGGTTTACTTTGAAAATAATTTGAAGCATATTGTTTTTCATAGGATATGCAACAAGGCGTGATGATTATAACCCATCATTTCTGCACTTGAATGATGAATATTCTCATGCACTACCATCTGATCTTCGTTGTATATTCTAATTTGATATTATTTTTAACACATTTTGTTCTTCCTTTTGTTTCGTTTTTAACTTTGTACCTATTGCTGCAATCTATGATGCAAACTACCCACATTACTGATTTTCTATGATTATATAATCAAATTTCACCATCTTTCGGCTGAGGTTGCAGTACAAGTATTTATTTCCTTTTACCTTTCATAGTTTTCCGAATCTATTGATTTGAATTTGCCCGTGGTATCTAATGTCCAGACGTTGATTTAAATGTTTGGACGTTTCGTTTTGAGGGCATAGACTAATAATACACAGGTCTTGCGACACAGTTAGCTTTTTATAAACTCAAGCTTTCTGTTACTAAAATCCTGCGTACATATATATTGTTTTATTACTTTTTGCTTTCTACTTGTCTCATCATACACACAGGTCTTGCGACACCGTTAGCTTTTTATTAACTCAAAAGCTTTATGTTACTAAGTACCTACGCACATATATTGTTTAATTACTTTTCGCTTTCTATTTGTCTCAAACAATCAATTTGGTTTTCTCATCTTGTATTGTTCATCTTACAGGAAAACTGGAGAAGACCAAAGGGTATTGATTCCAGAGTGAGAAGAAAGTTTAAAGGATGTACATTAATGCCAAACATTGGTTATGGCACTGACAAGAAGACCCGCCACTACCTTCCCAATGGGTTCAAGAAGTTTGTTGTTCATAATGTCAATGAGCTCGAACTCTTGATGATGCACAATAGGTTTGTGGGGGACCTCTGATGTTTTACTTGATCCATCGTTTTTGTACATGTTTCCTTTGTTTGATCTTTGTTTTTTTCCCTACTGCAGAACTTACTGTGCGGAGATTGCCCACGATGTTTCAACAAAGAAGAGGAAAGAAATTGTCGAGAGGGCAGCTCAACTTGATGTTGTAGTTACCAACAAGCTTGCCAGGTTGCGCAGCCAAGAGGATGAATGAACAATTTAGATCGTTAAATGCAGTTTTCATCATGTTTTGTAGTGAGATTTGGTTAATATATACCATTTTGGTTCAAGAGATTTTTATATTTAATGACTTCTGAATCTGAATTTTTACAACTGTCATTTCAACATTATAATTTTGAATTGAGATGTTTGAATTTTGAAGTTGATTCCATATCATTGCATGGCTTGGCGGCGCCTCCCAGTTGCTGCTGTTTTGATATTTAAACTCAGTCTTTTTCTGTAAATAAGATTTTAGGTGATATATAAAGCTGGAATGAAGTGTATATATGCTTGTTAATGTAAGATTTGGTACTGAATTGACCCAACTCTTGCCTTGTTTATTTTTAATTGTTGTGGGTATATTTTCGGTGTGTTTGGTGTCGTATGATGAAAGTTGGTCTTATAAATTGTTATATATTCCACCGGACTAGATGTTCGTTCACTCAATAGTAACATCTAGTCAAATCATTTTGTTAGCAATTCATTGGTTTGCAAAACTTAAGAACACAAATATATCGTAACAGAATTGTTTTCGTAAGTTTTGCATGATGGCAGATTCAGATTTAGAAGTTGGATTTTAATAAAGATTTGTAATAATTTGAAATTTATTGATTAGTTTTTTTTAAATATGATTTATGTTAAAAATGTATATTAATTTTTAAGGGAAAATAAACAAAAAAATTTTCTATACTGGTAAATTGTTTATTCTTATATTAATAAATAATTTTGTCTATTTTGCTATATTTAAAAACAACTTTAATTTTTATTTAATATAATTTGTATTTAAAATTTTAAAATTCAAAATTTAGATGTAATATATGAAAATATTATTAGAATTTGCATTTTTTGGTTTATATAAAAATTTCTGGAGGTATTTGCTAAATATAGTTTTGTCGAACTTGATTTGAAAACATTAAACGAATTTTAGATTTGTGAAAGTATTACATAATTTTGACGTAAAATGTAATGAACAATAAAGCCTAAGACAATGTACTCAATATAAAGACATAAAAACGATGGATTTGAACTAAAAAGAACGAAAACAAACAAATGACTAATTTGTTAAATAAGATTCGAACATATGTCAACATACAATCAATATCATATTTTAGAAGTACATTGTTTCAAAACATTCAAACGTTTTATGGAAGTATATTTGCCCTCAAATTCCTTGAGTTGAGCTGCCTACCTTCGTCCTAATCCGCAATAACGCAGCTTGGTTTGTCCTTGTTGAGTCAAACAAAGATCTTCATAATATATGAAAAAGATTGTATTTGTCATGCAATTCATTGCAATCATAACTAGCTAGAGAGCTGATCATGTAGAGTTCTTATTCAAAAGTAAATTCAGTTCTTTTATTGAGGAGGCTTGCTCTCCTACTTCCTTTATGAATATCTTTGGCTTTTGTACAATTCCGAGAGGAACAAAGTTACCTATGAATTTGTAACTTTGACTTCTTCTTCAGGGTTTTCTTTGATTTGGAAATATGTCTTTCGATTGTCGGTCTTGGCTCTTATTCATAAGAGATTCTAAGAACATCTTGTTTGCCTAGTTAATATTTGGAAGAAGGAAAAAAAAAAAAAAAAAATTTTAGCCTGAATGTGGATAATGGATATTGGCTTTACTGGCCCTAGGATTATAGGTATCTAGCCATTTTATCCCCTTTGTCAAAGAATATCACTTTTCTTACCTTGTGCAGCAGAATGTACCATTTAAAATAGAAGACTTACAAATGTTGGCAAAGAAAGAATTTTTGATATCCTTTTTTTTGCCTTGAACAAGAAGCATTATCCTTCCCTTTACAACTCCAAAGAGCCCTTTGGACACTGCAGGCTTAGCAAGTAAAGAACCAGAACCTTCCTTTTCACCCCATTTATAACCATCTCTGCCCCTTCCTTTTACTTACACATTACAATTCTTCTCAAATCCCAAAACTTTTGGGTCTTCATTCTTGGGAAACTCCTTATCTTTTCTTCTTTTCTCTTCAAAACCAGCCTTTTGTTTCTGAAAACTCACTGCACAAAATGGCTAGTACACAGATGAAATCCATTGCCGCTTTGCTTCTCTTCCTCAACTTCTGCATGTATGCTATTATTTTGGGCATTGGTGGCTGGGCCATGAACCATGCAATTGATCATGGCTTCATCATTGGTAACATCCCATGTCCTTCATTAATCTCTATTTTGATCTTTTATGAGTTAGTTTACGTGCATCACATAACAACTCACTTAGGTCTACAACTTTTAAGTGTTGAGGAAACTAGTAGGATATTAGATCTTAGATAGGTGGCCACCATGGATTAAACCTTTATCAAGCTCAAGTCTTTTATTTACCACTAGACTAACCATGATGTTCTCTGATATATCTCTACTCATAATCTGTTTTGAACTTGGAGTTTATCGTCACCCTTGTCTCGAAAAGATTATTCGCAGCAAAAACTTTGATAGTACTACAATCATATGATGTAAATTGAAAAGTGACAAACTTCTATGTTATGTTCGTGTTAGTATATGTTGTCGTTTATTGTTTCTTGTTCAGTTTGAAGGTGCTCGATGATGTTAATGAATGAGAATTTGCAGGTCCCGGGCTACGACTACCGGCACATTTTTCGCCAATTTACTTTCCCATGGGGAATGCAGCAACTGGTTTCTTTGTGACATTTGCTTTGTTGGCTGCTGTGTTTGGAGCTGCCTCAGCAATCTCAGGATTGAACCATATTCGATCATGGAGTGCTGAAAGCTTAGGGGCAGCATCTTCTGCTGCTGTTTTTGCTTGGACTCTCACTATCCTTGCCATGGGGTATGCTTTCCACTCTCTTTGATGATATTTTATTTTACATTGTTTAGTTCAACGAGTAAGGGTGAAAGTATTTGAACCTCTGATCTTTTGGTAAAGAACATGTCTTACCAGTTGAGTTATGCTTAAATTGGTTGTGATATTTTATCTTGTTTTTTAAAGAAACCTAATTGACAAAATAGGGATGATATTAGAATCTTCGTAACAAAACGGGCGCGTAATTTCTTTAATAACATATGAGAAACTAGGATAACTTAGACAACCTAAACTGAATTCTGAGGTTTTGTTCTTTATATGCAGCTTTGCTTGCAAAGAGATTGCACTGGATTTCAGAAACGCAAGATTGGTAAGAAAAAGAAATTTCTATGTTTACACAATCTACAATTTCTTCTCACAAATTTAATCTAAAAGAATTCCAGTTAAAAGAATATTGAAATGACAAAGAGTTGCATTTGTTTTCATATGATTGCAGGTAACAATGGAGGCTTTCTTCATTATTCTCTCTGCTACACAGCTAGTTTACATAATGGCCATCCATGGTGGTGTTTCCACAAGATGAGAGCTGAATGATGGAACATTATTTGTTTAATTCATTGCCCATTTTCATTTGTCTTTTGGTCTTATTTTCCTTGGTTTTAACTTACAATTCATCTGCTTACATTGCAACTTGCAACAAGCTTAGTTTAGAACATTATTTTTTTTTGTGATTTGTGTGGTGTGATTTTATTTGTATAAATATTGACAATAAACATTGGTTTGGTATTTGATTTAACGGATTCACTCACTCTCTTTCAAATTTTTATCTGTTGGATGAATAATTCAAATAAAT

mRNA sequence

AAGAAACCCTAATTGAACGGTCATTCTCTATATAAACCATTCAGAGCCTTGGAACATATCGTCGAAGCTTGGACGGCCAAAGCAAACCCTAGTTTCTGGTTAAGCGAAAATGGCGGTGCCTTTGCTGTCGAAGAAGATTGTGAAGAAGAGGACCAAGAAGTTCAAGAGGCCCCAGAGTGATCGAAAGATCTCCGTCAAGGAAAACTGGAGAAGACCAAAGGGTATTGATTCCAGAGTGAGAAGAAAGTTTAAAGGATGTACATTAATGCCAAACATTGGTTATGGCACTGACAAGAAGACCCGCCACTACCTTCCCAATGGGTTCAAGAAGTTTGTTGTTCATAATGTCAATGAGCTCGAACTCTTGATGATGCACAATAGAACTTACTGTGCGGAGATTGCCCACGATGTTTCAACAAAGAAGAGGAAAGAAATTGTCGAGAGGGCAGCTCAACTTGATGTTGTAGTTACCAACAAGCTTGCCAGCTTTGCTTGCAAAGAGATTGCACTGGATTTCAGAAACGCAAGATTGGTAACAATGGAGGCTTTCTTCATTATTCTCTCTGCTACACAGCTAGTTTACATAATGGCCATCCATGGTGGTGTTTCCACAAGATGAGAGCTGAATGATGGAACATTATTTGTTTAATTCATTGCCCATTTTCATTTGTCTTTTGGTCTTATTTTCCTTGGTTTTAACTTACAATTCATCTGCTTACATTGCAACTTGCAACAAGCTTAGTTTAGAACATTATTTTTTTTTGTGATTTGTGTGGTGTGATTTTATTTGTATAAATATTGACAATAAACATTGGTTTGGTATTTGATTTAACGGATTCACTCACTCTCTTTCAAATTTTTATCTGTTGGATGAATAATTCAAATAAAT

Coding sequence (CDS)

ATGGCGGTGCCTTTGCTGTCGAAGAAGATTGTGAAGAAGAGGACCAAGAAGTTCAAGAGGCCCCAGAGTGATCGAAAGATCTCCGTCAAGGAAAACTGGAGAAGACCAAAGGGTATTGATTCCAGAGTGAGAAGAAAGTTTAAAGGATGTACATTAATGCCAAACATTGGTTATGGCACTGACAAGAAGACCCGCCACTACCTTCCCAATGGGTTCAAGAAGTTTGTTGTTCATAATGTCAATGAGCTCGAACTCTTGATGATGCACAATAGAACTTACTGTGCGGAGATTGCCCACGATGTTTCAACAAAGAAGAGGAAAGAAATTGTCGAGAGGGCAGCTCAACTTGATGTTGTAGTTACCAACAAGCTTGCCAGCTTTGCTTGCAAAGAGATTGCACTGGATTTCAGAAACGCAAGATTGGTAACAATGGAGGCTTTCTTCATTATTCTCTCTGCTACACAGCTAGTTTACATAATGGCCATCCATGGTGGTGTTTCCACAAGATGA

Protein sequence

MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNKLASFACKEIALDFRNARLVTMEAFFIILSATQLVYIMAIHGGVSTR

Homology

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BLAST of Clc03G07540 vs. NCBI nr
Match: XP_008443854.1 (PREDICTED: 60S ribosomal protein L32-1 [Cucumis melo])

HSP 1 Score: 250.0 bits (637), Expect = 1.5e-62
Identity = 126/131 (96.18%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLASFACKE 132
           TNKLA    +E
Sbjct: 121 TNKLARLRSQE 131

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BLAST of Clc03G07540 vs. NCBI nr
Match: XP_011657475.1 (60S ribosomal protein L32-1 [Cucumis sativus] >KGN65577.1 hypothetical protein Csa_019557 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 4.3e-62
Identity = 125/131 (95.42%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRT+KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLASFACKE 132
           TNKLA    +E
Sbjct: 121 TNKLARLRSQE 131

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BLAST of Clc03G07540 vs. NCBI nr
Match: XP_038894346.1 (60S ribosomal protein L32-1 [Benincasa hispida])

HSP 1 Score: 247.7 bits (631), Expect = 7.3e-62
Identity = 125/131 (95.42%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 21  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 80

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 81  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 140

Query: 121 TNKLASFACKE 132
           TNKLA    +E
Sbjct: 141 TNKLARLRSQE 151

[Close]

BLAST of Clc03G07540 vs. NCBI nr
Match: XP_031284536.1 (60S ribosomal protein L32-1-like [Pistacia vera])

HSP 1 Score: 246.5 bits (628), Expect = 1.6e-61
Identity = 124/131 (94.66%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR KKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRAKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLASFACKE 132
           TNKLA    +E
Sbjct: 121 TNKLARLRSQE 131

[Close]

BLAST of Clc03G07540 vs. NCBI nr
Match: XP_012085082.1 (60S ribosomal protein L32-1 [Jatropha curcas])

HSP 1 Score: 245.4 bits (625), Expect = 3.6e-61
Identity = 123/131 (93.89%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR KKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLASFACKE 132
           TNKLA    +E
Sbjct: 121 TNKLARLRSQE 131

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BLAST of Clc03G07540 vs. ExPASy Swiss-Prot
Match: P49211 (60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 7.4e-57
Identity = 109/131 (83.21%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHN +ELELLMMHNRTYCAEIAH+VSTKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 TNKLASFACKE 132
           TN+LA    +E
Sbjct: 121 TNRLARLRSQE 131

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BLAST of Clc03G07540 vs. ExPASy Swiss-Prot
Match: Q9FHG2 (60S ribosomal protein L32-2 OS=Arabidopsis thaliana OX=3702 GN=RPL32B PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 4.8e-56
Identity = 106/131 (80.92%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN +ELELLMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLASFACKE 132
           +NKL     +E
Sbjct: 121 SNKLGRLRSQE 131

[Close]

BLAST of Clc03G07540 vs. ExPASy Swiss-Prot
Match: E2RKA8 (60S ribosomal protein L32 OS=Canis lupus familiaris OX=9615 GN=RPL32 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 3.9e-42
Identity = 85/128 (66.41%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 4   PLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKK 63
           PL+  KIVKKRTKKF R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNV ELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LASFACKE 132
            A    +E
Sbjct: 126 NARLRSEE 133

[Close]

BLAST of Clc03G07540 vs. ExPASy Swiss-Prot
Match: P62910 (60S ribosomal protein L32 OS=Homo sapiens OX=9606 GN=RPL32 PE=1 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 3.9e-42
Identity = 85/128 (66.41%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 4   PLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKK 63
           PL+  KIVKKRTKKF R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNV ELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LASFACKE 132
            A    +E
Sbjct: 126 NARLRSEE 133

[Close]

BLAST of Clc03G07540 vs. ExPASy Swiss-Prot
Match: Q76KA3 (60S ribosomal protein L32 OS=Macaca fascicularis OX=9541 GN=RPL32 PE=2 SV=3)

HSP 1 Score: 172.6 bits (436), Expect = 3.9e-42
Identity = 85/128 (66.41%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 4   PLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKK 63
           PL+  KIVKKRTKKF R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNV ELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LASFACKE 132
            A    +E
Sbjct: 126 NARLRSEE 133

[Close]

BLAST of Clc03G07540 vs. ExPASy TrEMBL
Match: A0A1S3B8Z6 (60S ribosomal protein L32-1 OS=Cucumis melo OX=3656 GN=LOC103487346 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.1e-63
Identity = 126/131 (96.18%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLASFACKE 132
           TNKLA    +E
Sbjct: 121 TNKLARLRSQE 131

[Close]

BLAST of Clc03G07540 vs. ExPASy TrEMBL
Match: A0A0A0LXN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G462020 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.1e-62
Identity = 125/131 (95.42%), Postives = 127/131 (96.95%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRT+KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLASFACKE 132
           TNKLA    +E
Sbjct: 121 TNKLARLRSQE 131

[Close]

BLAST of Clc03G07540 vs. ExPASy TrEMBL
Match: B9S183 (60S ribosomal protein L32, putative OS=Ricinus communis OX=3988 GN=RCOM_0634780 PE=3 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.9e-61
Identity = 123/131 (93.89%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR KKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLASFACKE 132
           TNKLA    +E
Sbjct: 121 TNKLARLRSQE 131

[Close]

BLAST of Clc03G07540 vs. ExPASy TrEMBL
Match: A0A6A2Z367 (60S ribosomal protein L32 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111088pilonHSYRG00032 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 5.1e-61
Identity = 122/131 (93.13%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKR KKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYG+
Sbjct: 1   MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLD+VV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVQELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDIVV 120

Query: 121 TNKLASFACKE 132
           TNKLA    +E
Sbjct: 121 TNKLARLRSQE 131

[Close]

BLAST of Clc03G07540 vs. ExPASy TrEMBL
Match: A0A6J1KGP3 (60S ribosomal protein L32-1 OS=Cucurbita maxima OX=3661 GN=LOC111495610 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.7e-61
Identity = 122/131 (93.13%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLLSKKIVKKRT+KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNV ELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLASFACKE 132
           TNKLA    +E
Sbjct: 121 TNKLARLRSQE 131

[Close]

BLAST of Clc03G07540 vs. TAIR 10
Match: AT4G18100.1 (Ribosomal protein L32e )

HSP 1 Score: 221.5 bits (563), Expect = 5.2e-58
Identity = 109/131 (83.21%), Postives = 122/131 (93.13%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHN +ELELLMMHNRTYCAEIAH+VSTKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 TNKLASFACKE 132
           TN+LA    +E
Sbjct: 121 TNRLARLRSQE 131

[Close]

BLAST of Clc03G07540 vs. TAIR 10
Match: AT5G46430.1 (Ribosomal protein L32e )

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-57
Identity = 106/131 (80.92%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN +ELELLMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLASFACKE 132
           +NKL     +E
Sbjct: 121 SNKLGRLRSQE 131

[Close]

BLAST of Clc03G07540 vs. TAIR 10
Match: AT5G46430.2 (Ribosomal protein L32e )

HSP 1 Score: 218.8 bits (556), Expect = 3.4e-57
Identity = 106/131 (80.92%), Postives = 121/131 (92.37%), Query Frame = 0


Query: 1   MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60
           MAVPLL+KK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN +ELELLMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLASFACKE 132
           +NKL     +E
Sbjct: 121 SNKLGRLRSQE 131

[Close]

BLAST of Clc03G07540 vs. TAIR 10
Match: AT5G46530.1 (AWPM-19-like family protein )

HSP 1 Score: 55.1 bits (131), Expect = 6.5e-08
Identity = 32/52 (61.54%), Postives = 36/52 (69.23%), Query Frame = 0


Query: 113 AAQLDVVVTNKLASFACKEIALDFRNARLVTMEAFFIILSATQLVYIMAIHG 165
           AA +   +T     F CKEI L  RNARL TMEAF IILSATQL+YI AI+G
Sbjct: 103 AATIAWSLTLLAMGFGCKEIELGMRNARLRTMEAFLIILSATQLLYIAAIYG 154

[Close]

BLAST of Clc03G07540 vs. TAIR 10
Match: AT1G29520.1 (AWPM-19-like family protein )

HSP 1 Score: 52.4 bits (124), Expect = 4.2e-07
Identity = 30/52 (57.69%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 113 AAQLDVVVTNKLASFACKEIALDFRNARLVTMEAFFIILSATQLVYIMAIHG 165
           AA +   +T     FA KEI L  RNA+L TMEAF IILS TQL+YI A+HG
Sbjct: 103 AATIAWTLTVLAMGFAWKEIELQGRNAKLRTMEAFLIILSVTQLIYIAAVHG 154

The following BLAST results are available for this feature:

BLAST of Clc03G07540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443854.1	1.5e-62	96.18	PREDICTED: 60S ribosomal protein L32-1 [Cucumis melo]	[more]
XP_011657475.1	4.3e-62	95.42	60S ribosomal protein L32-1 [Cucumis sativus] >KGN65577.1 hypothetical protein C...	[more]
XP_038894346.1	7.3e-62	95.42	60S ribosomal protein L32-1 [Benincasa hispida]	[more]
XP_031284536.1	1.6e-61	94.66	60S ribosomal protein L32-1-like [Pistacia vera]	[more]
XP_012085082.1	3.6e-61	93.89	60S ribosomal protein L32-1 [Jatropha curcas]	[more]

BLAST of Clc03G07540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49211	7.4e-57	83.21	60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2	[more]
Q9FHG2	4.8e-56	80.92	60S ribosomal protein L32-2 OS=Arabidopsis thaliana OX=3702 GN=RPL32B PE=2 SV=1	[more]
E2RKA8	3.9e-42	66.41	60S ribosomal protein L32 OS=Canis lupus familiaris OX=9615 GN=RPL32 PE=1 SV=1	[more]
P62910	3.9e-42	66.41	60S ribosomal protein L32 OS=Homo sapiens OX=9606 GN=RPL32 PE=1 SV=2	[more]
Q76KA3	3.9e-42	66.41	60S ribosomal protein L32 OS=Macaca fascicularis OX=9541 GN=RPL32 PE=2 SV=3	[more]

BLAST of Clc03G07540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8Z6	7.1e-63	96.18	60S ribosomal protein L32-1 OS=Cucumis melo OX=3656 GN=LOC103487346 PE=3 SV=1	[more]
A0A0A0LXN1	2.1e-62	95.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G462020 PE=3 SV=1	[more]
B9S183	3.9e-61	93.89	60S ribosomal protein L32, putative OS=Ricinus communis OX=3988 GN=RCOM_0634780 ...	[more]
A0A6A2Z367	5.1e-61	93.13	60S ribosomal protein L32 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111088pil...	[more]
A0A6J1KGP3	6.7e-61	93.13	60S ribosomal protein L32-1 OS=Cucurbita maxima OX=3661 GN=LOC111495610 PE=3 SV=...	[more]

BLAST of Clc03G07540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18100.1	5.2e-58	83.21	Ribosomal protein L32e	[more]
AT5G46430.1	3.4e-57	80.92	Ribosomal protein L32e	[more]
AT5G46430.2	3.4e-57	80.92	Ribosomal protein L32e	[more]
AT5G46530.1	6.5e-08	61.54	AWPM-19-like family protein	[more]
AT1G29520.1	4.2e-07	57.69	AWPM-19-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001515	Ribosomal protein L32e	SMART	SM01393	Ribosomal_L32e_2	coord: 15..122 e-value: 2.1E-73 score: 259.9
IPR001515	Ribosomal protein L32e	PFAM	PF01655	Ribosomal_L32e	coord: 15..122 e-value: 1.9E-49 score: 166.6
IPR001515	Ribosomal protein L32e	PANTHER	PTHR23413	60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N	coord: 1..131
IPR001515	Ribosomal protein L32e	CDD	cd00513	Ribosomal_L32_L32e	coord: 18..122 e-value: 5.95909E-63 score: 187.352
IPR008390	AWPM-19-like	PFAM	PF05512	AWPM-19	coord: 126..165 e-value: 3.8E-12 score: 46.6
None	No IPR available	PANTHER	PTHR23413:SF18	60S RIBOSOMAL PROTEIN L32-1-LIKE	coord: 1..131
IPR036351	Ribosomal protein L32e superfamily	SUPERFAMILY	52042	Ribosomal protein L32e	coord: 2..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G07540.2	Clc03G07540.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome