Clc03G07290 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G07290
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	ClcChr03: 7536431 .. 7539211 (+)
RNA-Seq Expression	Clc03G07290
Synteny	Clc03G07290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCTCCAGCAAGACTAATTTTAGCATAACTGTTTTTTTCTCTTTCTTTCCTCTATCTTCTTTGGCACAACCAACTTTGGTGAAAAACTACTCAGAAACTAAGAGAGCATAGTGATATGTGAGTGAGGAAAAAAATTGCGAGACTGAAATGATATTTCTGCATGCACGGATTTATTTTAGTAATTTCAAATAAACATGACATCAACAAATAGACATTTAACATTTTTTTCCAAAAAAAAAAAAAAAACAGGATATTTGCCATTTTGGACCCAAATTTTGTGTCAGCCGTGCAAGTTTCCCCAAAATTTGACGCCAAACTTTCTTCGACAGCTTTGCCTCTTGAGTCATCGGAGTCATTGCCGGCAGCTTCATGGGTGAAAAAATGCAGCCACAGTCGCCACCGCCATCTGTATCTCTTCACTCCAATTTCTTTTCCTCTCTAAAGCAGGTAAACCCCAATTTCAATTCCATTTCCCCTCTCTCCCCTGTTTCTCTCCCTCATTTTCCTTGAATTGATTCACAACACAGGTCGAAAAGCGCCTAAAATTAGACCATCCATCTCAGCAGGGCATTCTTCATCCACCGCCGCCATTTCCACTAGAAACCAATTCTTCTTCATCGGCCGGAGAGTCACTGAGCACTCCTTTATACCTTCATTTCTCACAAACCGATACAAGCTCCGCCCTACAAGAAAGCAGCGAACCGCCACTAGAATTCCTCTCAAATTCCTCCCAAACTCCACCATCCCATCCGCAATCAGAATCGAATCCTCGGAATCCCATCGATCATGGCCAAAATCGGGGTTTAGACCACATTCAACGGCTAATTCAACTGCTAGGGTTAGGAGATTCGCGTGACGAAAAGGAATTAGGAACTAAGAGTGGCTGTAATGGCTGTGAGGGTTGTGAAAGCGGCTTTTACAGCAAGATCGTTGGCCTGAAAGGCCCCAAATGTAGAAAAGAGGTGGAGAGGCTAAATGGATGGATTGAGTTCTTTTGGAATGGTGGTGGTGAAGAAGAGAGATTAGAGCCTCTTAGATTGGCGTATTTACTGTTAGGGAAAGCTGTTTTTGCTTCTAATGAGGGTGATGGGTGTTTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGACTTTTTGCTAAATGATCCTCCTCCATGATAGGTAATAATCCCTGTTTTGTACATAATTATTCTTTATTTCATAAGCATGAGAAGTTGAATTGAAGCTTTAATTTCCCTTTGTGGGTCAATAATGGCCACTATTAGCTCTATTCTCTTATGAGTTTGCAAGAGCTGTTTGTAGTGATTTCTTTCAGAGGTTCAGTTTCTCTCTCATTCGTCATTGGGATTTTAGTGATATGATCAGAGAGTTCCTCCTCTATCCATTCTTTTGTGAGAAGGGTTGTCTTCTCTAACTAGCTTGCAGGGTGTGTGCTATTTTGTGAGATGTATGGGACAAGCAGAATAATCAAGTGTTATTTTGTGAGATGTATGGGGTAAGCAGAATAATCAAGTGTTTAGAGCATTGGAAAAGGATCCTAGCGATGGTCACTTGTTAGATTTCATGTTTCTCTTTAGGCTTTAATTTCGAAGACTTCTTTAATTACTCTTTAGGTTCTATCTTATAAAGTTGGAGCCACTCTTTTAGTTGGGCTCCCTTTTTGTGGAATTTGTTTTTTTTTTTTATATCCATGTATTCCTTTATTTTTACAACTTGATTTTTCATGTCCATTTTTCGAATTCGGAATTTGGGTTATGTGTAAAACACGCAAATGAAGTAAAAAAACTTCTGAGAGAACCTGGATTTGATGCCTTGAATCCATCTCTAAATCAACATTCAGTGATGTGATAAAATCTGTTGGTTCTGATTCACTGGTTTAGTTCATGGAACTGATTGTCAATCCATTGACTTCTATAAGTCTTTTTTATTTTTCTTTTTTGAAGGAAAGGGAGATTTGCTTGAATATTGAGCATAAAGATTTGCATACTTTGGAAGACATTCTTTGTTTGTTCTTTTTCTTTCGCAATGATCCCTCGATGTTGAAACTGTGTAGATTATTTGAATTATTCCTACTTTGATAATCCAAGTGAATAGATGGATTGATGTTGTGAACTTGCCAGGAAAATGGGAAGGCATGGCTGAAAAATTCGGTTAGGATGAAAACTAGTTGCTAAAGCAGAGGAACATCTGGTCTTGGTTTGGTACCTCAGAGAGAAAAAGAAAATGGTTTGAATTGAACTGATTGGTAAGCTGAATTTAGATGTATAAATGTTCTTGGTGGCCAATTTTCTTAATCCTGTGTCTTTGTAGGTTGGAATGCATGGAACTCATGAGATAATTCAGAACTCATGAGATAATTCAAACAAAGTCTTATCGAATCCAACCATTTTAGTTTGGATTTCCACCAATTTGGTTTAGAACCGTTCTTTGTTTTGTTTCTGGATACAGTTTTTTTTTTATTCAATTGATATTAACACAAGCATTCTCAATGAGAGTTGCCTGGCAAAAAATGAAAATTAAAAATTAAAAAATGACAGCTGTGGGATTTGAACCCACGCCCTTTCGGACCAGAGCCTAAATCTGGCGCCTTAGACCACTCGGCCAAACTGTCAAATTTTGATAAATATTCTCTTATTATTCTATTTAACTAAATTTTTTTAAAATTAAAGTATGGTGGTGATGATTGCATTTCAACCCTTAAACTTTCAATTGTAAAAATTGGGCCCCTAAACTTCTTCAAATATTAAAATTGGACCCTTAAGCTTACAATAATTGTAGAA

mRNA sequence

CCTTCTCCAGCAAGACTAATTTTAGCATAACTGTTTTTTTCTCTTTCTTTCCTCTATCTTCTTTGGCACAACCAACTTTGGTGAAAAACTACTCAGAAACTAAGAGAGCATAGTGATATGATATTTGCCATTTTGGACCCAAATTTTGTGTCAGCCGTGCAAGTTTCCCCAAAATTTGACGCCAAACTTTCTTCGACAGCTTTGCCTCTTGAGTCATCGGAGTCATTGCCGGCAGCTTCATGGGTGAAAAAATGCAGCCACAGTCGCCACCGCCATCTGTATCTCTTCACTCCAATTTCTTTTCCTCTCTAAAGCAGGTCGAAAAGCGCCTAAAATTAGACCATCCATCTCAGCAGGGCATTCTTCATCCACCGCCGCCATTTCCACTAGAAACCAATTCTTCTTCATCGGCCGGAGAGTCACTGAGCACTCCTTTATACCTTCATTTCTCACAAACCGATACAAGCTCCGCCCTACAAGAAAGCAGCGAACCGCCACTAGAATTCCTCTCAAATTCCTCCCAAACTCCACCATCCCATCCGCAATCAGAATCGAATCCTCGGAATCCCATCGATCATGGCCAAAATCGGGGTTTAGACCACATTCAACGGCTAATTCAACTGCTAGGGTTAGGAGATTCGCGTGACGAAAAGGAATTAGGAACTAAGAGTGGCTGTAATGGCTGTGAGGGTTGTGAAAGCGGCTTTTACAGCAAGATCGTTGGCCTGAAAGGCCCCAAATGTAGAAAAGAGGTGGAGAGGCTAAATGGATGGATTGAGTTCTTTTGGAATGGTGGTGGTGAAGAAGAGAGATTAGAGCCTCTTAGATTGGCGTATTTACTGTTAGGGAAAGCTGTTTTTGCTTCTAATGAGGGTGATGGGTGTTTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGACTTTTTGCTAAATGATCCTCCTCCATGATAGGAAAATGGGAAGGCATGGCTGAAAAATTCGGTTAGGATGAAAACTAGTTGCTAAAGCAGAGGAACATCTGGTCTTGGTTTGGTACCTCAGAGAGAAAAAGAAAATGGTTTGAATTGAACTGATTGGTAAGCTGAATTTAGATGTATAAATGTTCTTGGTGGCCAATTTTCTTAATCCTGTGTCTTTGTAGGTTGGAATGCATGGAACTCATGAGATAATTCAGAACTCATGAGATAATTCAAACAAAGTCTTATCGAATCCAACCATTTTAGTTTGGATTTCCACCAATTTGGTTTAGAACCGTTCTTTGTTTTGTTTCTGGATACAGTTTTTTTTTTATTCAATTGATATTAACACAAGCATTCTCAATGAGAGTTGCCTGGCAAAAAATGAAAATTAAAAATTAAAAAATGACAGCTGTGGGATTTGAACCCACGCCCTTTCGGACCAGAGCCTAAATCTGGCGCCTTAGACCACTCGGCCAAACTGTCAAATTTTGATAAATATTCTCTTATTATTCTATTTAACTAAATTTTTTTAAAATTAAAGTATGGTGGTGATGATTGCATTTCAACCCTTAAACTTTCAATTGTAAAAATTGGGCCCCTAAACTTCTTCAAATATTAAAATTGGACCCTTAAGCTTACAATAATTGTAGAA

Coding sequence (CDS)

ATGGGTGAAAAAATGCAGCCACAGTCGCCACCGCCATCTGTATCTCTTCACTCCAATTTCTTTTCCTCTCTAAAGCAGGTCGAAAAGCGCCTAAAATTAGACCATCCATCTCAGCAGGGCATTCTTCATCCACCGCCGCCATTTCCACTAGAAACCAATTCTTCTTCATCGGCCGGAGAGTCACTGAGCACTCCTTTATACCTTCATTTCTCACAAACCGATACAAGCTCCGCCCTACAAGAAAGCAGCGAACCGCCACTAGAATTCCTCTCAAATTCCTCCCAAACTCCACCATCCCATCCGCAATCAGAATCGAATCCTCGGAATCCCATCGATCATGGCCAAAATCGGGGTTTAGACCACATTCAACGGCTAATTCAACTGCTAGGGTTAGGAGATTCGCGTGACGAAAAGGAATTAGGAACTAAGAGTGGCTGTAATGGCTGTGAGGGTTGTGAAAGCGGCTTTTACAGCAAGATCGTTGGCCTGAAAGGCCCCAAATGTAGAAAAGAGGTGGAGAGGCTAAATGGATGGATTGAGTTCTTTTGGAATGGTGGTGGTGAAGAAGAGAGATTAGAGCCTCTTAGATTGGCGTATTTACTGTTAGGGAAAGCTGTTTTTGCTTCTAATGAGGGTGATGGGTGTTTGGAAGGATTGGAATTCCCTTCAACTGTAGAGGACTTTTTGCTAAATGATCCTCCTCCATGA

Protein sequence

MGEKMQPQSPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQGILHPPPPFPLETNSSSSAGESLSTPLYLHFSQTDTSSALQESSEPPLEFLSNSSQTPPSHPQSESNPRNPIDHGQNRGLDHIQRLIQLLGLGDSRDEKELGTKSGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFWNGGGEEERLEPLRLAYLLLGKAVFASNEGDGCLEGLEFPSTVEDFLLNDPPP

Homology

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BLAST of Clc03G07290 vs. NCBI nr
Match: XP_038895328.1 (uncharacterized protein LOC120083579 [Benincasa hispida])

HSP 1 Score: 388.3 bits (996), Expect = 4.8e-104
Identity = 191/228 (83.77%), Postives = 205/228 (89.91%), Query Frame = 0


Query: 7   PQSPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQGILHPPPPFPLETNSSSSAGESLSTPL 66
           PQ PPPSVSLHSNFFSSLKQVEKRLKLDH SQ+ +LHPPP FP+ETNSSSS  +SLSTP+
Sbjct: 4   PQPPPPSVSLHSNFFSSLKQVEKRLKLDHQSQRDVLHPPPSFPVETNSSSSTEDSLSTPM 63

Query: 67  YLHFSQTDTSSALQESSEPPLEFLSNSSQTPPSHPQSESNPRNPIDHGQNRGLDHIQRLI 126
           YLHF QT+T SALQESSEPPLEFLSNSSQ+PPSHP+SESNP   ID GQN  +  IQRLI
Sbjct: 64  YLHFPQTNTCSALQESSEPPLEFLSNSSQSPPSHPKSESNPSKHIDRGQNCVVGDIQRLI 123

Query: 127 QLLGLGDSRDEKELGTKSGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFWNGG 186
           QLLGLG+S DE ELG K+GCNGCEGCESGFYSKIVGLKGPKC+KEVERLNGWIEFF NGG
Sbjct: 124 QLLGLGNSCDEMELGAKNGCNGCEGCESGFYSKIVGLKGPKCKKEVERLNGWIEFFSNGG 183

Query: 187 GEEERLEPLRLAYLLLGKAVFASNEGDGCLEGLEFPSTVEDFLLNDPP 235
           GEEERLEPLRLAYLL GK+VFASN  DGCLEG+EFPSTVEDFLLNDPP
Sbjct: 184 GEEERLEPLRLAYLLFGKSVFASNGDDGCLEGMEFPSTVEDFLLNDPP 231

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BLAST of Clc03G07290 vs. NCBI nr
Match: XP_004147438.2 (uncharacterized protein LOC101217056 [Cucumis sativus] >XP_031743721.1 uncharacterized protein LOC101217056 [Cucumis sativus] >XP_031743726.1 uncharacterized protein LOC101217056 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 6.3e-104
Identity = 192/234 (82.05%), Postives = 208/234 (88.89%), Query Frame = 0


Query: 1   MGEKMQPQSPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQGILHPPPPFPLETNSSSSAGE 60
           MGEKM P   PP +SLHSNFFSSLKQVEKRLKLDH SQ+ +LHPPPP P+ TNSSS+  +
Sbjct: 1   MGEKM-PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEED 60

Query: 61  SLSTPLYLHFSQTDTSSALQESSEPPLEFLSNSSQTPPSHPQSESNPRNPIDHGQNRGLD 120
           SLSTP+YLHF QT+TSS LQESS+ PLEFLS+SSQ+PPSHP+SESNP  PID GQNR +D
Sbjct: 61  SLSTPMYLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVD 120

Query: 121 HIQRLIQLLGLGDSRDEKELGTKSGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIE 180
            IQRLIQLLGL DS DEKE G K+GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIE
Sbjct: 121 DIQRLIQLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIE 180

Query: 181 FFWNGGGEEERLEPLRLAYLLLGKAVFASNEGDGCLEGLEFPSTVEDFLLNDPP 235
           FF NGG EE+RLEPLRLAYLLLGKAVFASN+ DGCLEGLEFPSTVEDFLLNDPP
Sbjct: 181 FFSNGGDEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPP 233

[Close]

BLAST of Clc03G07290 vs. NCBI nr
Match: XP_008444181.1 (PREDICTED: uncharacterized protein LOC103487596 [Cucumis melo] >KAA0053967.1 uncharacterized protein E6C27_scaffold318G00090 [Cucumis melo var. makuwa] >TYK20652.1 uncharacterized protein E5676_scaffold480G00360 [Cucumis melo var. makuwa])

HSP 1 Score: 387.1 bits (993), Expect = 1.1e-103
Identity = 195/236 (82.63%), Postives = 209/236 (88.56%), Query Frame = 0


Query: 1   MGEKMQ-PQSPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQGILHPPPPFPLETNSSSSAG 60
           MGEKMQ P  PPP +SLHS+FFSSLKQVEKRLKLDH SQ+ +LHPPPP P++TN+SSS  
Sbjct: 1   MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTE 60

Query: 61  ES-LSTPLYLHFSQTDTSSALQESSEPPLEFLSNSSQTPPSHPQSESNPRNPIDHGQNRG 120
           E  LSTP+YLHF QT+TSS LQESS+PPLEFLSN S +PPSHP+S SNP N ID GQNR 
Sbjct: 61  EDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVSNPPNLIDRGQNRD 120

Query: 121 LDHIQRLIQLLGLGDSRDEKELGTKSGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGW 180
           LD IQRLIQLLGL DS DEKELGTK GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGW
Sbjct: 121 LDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGW 180

Query: 181 IEFFWNGGGEEERLEPLRLAYLLLGKAVFASNEGDGCLEGLEFPSTVEDFLLNDPP 235
           IEFF NGGGEE+RLEPLRLAYLLLGKAVFASN  DGCL+GLEFPSTVEDFLLNDPP
Sbjct: 181 IEFFSNGGGEEDRLEPLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPP 236

[Close]

BLAST of Clc03G07290 vs. NCBI nr
Match: KGN65550.1 (hypothetical protein Csa_019856 [Cucumis sativus])

HSP 1 Score: 382.5 bits (981), Expect = 2.6e-102
Identity = 187/228 (82.02%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 7   PQSPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQGILHPPPPFPLETNSSSSAGESLSTPL 66
           P   PP +SLHSNFFSSLKQVEKRLKLDH SQ+ +LHPPPP P+ TNSSS+  +SLSTP+
Sbjct: 2   PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPM 61

Query: 67  YLHFSQTDTSSALQESSEPPLEFLSNSSQTPPSHPQSESNPRNPIDHGQNRGLDHIQRLI 126
           YLHF QT+TSS LQESS+ PLEFLS+SSQ+PPSHP+SESNP  PID GQNR +D IQRLI
Sbjct: 62  YLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRLI 121

Query: 127 QLLGLGDSRDEKELGTKSGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFWNGG 186
           QLLGL DS DEKE G K+GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFF NGG
Sbjct: 122 QLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG 181

Query: 187 GEEERLEPLRLAYLLLGKAVFASNEGDGCLEGLEFPSTVEDFLLNDPP 235
            EE+RLEPLRLAYLLLGKAVFASN+ DGCLEGLEFPSTVEDFLLNDPP
Sbjct: 182 DEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPP 229

[Close]

BLAST of Clc03G07290 vs. NCBI nr
Match: XP_023001462.1 (uncharacterized protein LOC111495590 [Cucurbita maxima] >XP_023001463.1 uncharacterized protein LOC111495590 [Cucurbita maxima] >XP_023001464.1 uncharacterized protein LOC111495590 [Cucurbita maxima])

HSP 1 Score: 353.2 bits (905), Expect = 1.7e-93
Identity = 182/241 (75.52%), Postives = 200/241 (82.99%), Query Frame = 0


Query: 1   MGEKM--QPQSPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQGILHPP-----PPFPLETN 60
           MGEKM   P  PPPS+SLHS+FFSSLKQVEKRLKLD+PSQ+  L PP     P  P+E +
Sbjct: 3   MGEKMPPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEIS 62

Query: 61  SSSSAGESLSTPLYLHFSQTDTSSALQESSEPPLEFLSNSSQTPPSHPQSESNPRNPIDH 120
           SSSS  ESLSTP+YLH SQT+T+S+LQESSEPP EFLSNSS       +SESN  N ID 
Sbjct: 63  SSSSVEESLSTPMYLHLSQTNTASSLQESSEPPPEFLSNSSDL-----KSESNSPNLIDC 122

Query: 121 GQNRGLDHIQRLIQLLGLGDSRDEKELGTKSGCNGCEGCESGFYSKIVGLKGPKCRKEVE 180
           GQNR +D IQRL+QLLG GDS +EKELG +SGCNGCEGCESGFYSKIVGLKGPKC KEVE
Sbjct: 123 GQNRPVDDIQRLVQLLGFGDSFEEKELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVE 182

Query: 181 RLNGWIEFFWNGGGEEERLEPLRLAYLLLGKAVFASNEGDGCLEGLEFPSTVEDFLLNDP 235
           RLNGWI++FW GGGE ERLEPLRLAYLL+GKAVFASN GD CLEGLEFPSTVEDFLLNDP
Sbjct: 183 RLNGWIQYFWTGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDP 238

[Close]

BLAST of Clc03G07290 vs. ExPASy TrEMBL
Match: A0A5A7UHE6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00360 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.2e-104
Identity = 195/236 (82.63%), Postives = 209/236 (88.56%), Query Frame = 0


Query: 1   MGEKMQ-PQSPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQGILHPPPPFPLETNSSSSAG 60
           MGEKMQ P  PPP +SLHS+FFSSLKQVEKRLKLDH SQ+ +LHPPPP P++TN+SSS  
Sbjct: 1   MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTE 60

Query: 61  ES-LSTPLYLHFSQTDTSSALQESSEPPLEFLSNSSQTPPSHPQSESNPRNPIDHGQNRG 120
           E  LSTP+YLHF QT+TSS LQESS+PPLEFLSN S +PPSHP+S SNP N ID GQNR 
Sbjct: 61  EDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVSNPPNLIDRGQNRD 120

Query: 121 LDHIQRLIQLLGLGDSRDEKELGTKSGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGW 180
           LD IQRLIQLLGL DS DEKELGTK GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGW
Sbjct: 121 LDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGW 180

Query: 181 IEFFWNGGGEEERLEPLRLAYLLLGKAVFASNEGDGCLEGLEFPSTVEDFLLNDPP 235
           IEFF NGGGEE+RLEPLRLAYLLLGKAVFASN  DGCL+GLEFPSTVEDFLLNDPP
Sbjct: 181 IEFFSNGGGEEDRLEPLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPP 236

[Close]

BLAST of Clc03G07290 vs. ExPASy TrEMBL
Match: A0A1S3B9V1 (uncharacterized protein LOC103487596 OS=Cucumis melo OX=3656 GN=LOC103487596 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 5.2e-104
Identity = 195/236 (82.63%), Postives = 209/236 (88.56%), Query Frame = 0


Query: 1   MGEKMQ-PQSPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQGILHPPPPFPLETNSSSSAG 60
           MGEKMQ P  PPP +SLHS+FFSSLKQVEKRLKLDH SQ+ +LHPPPP P++TN+SSS  
Sbjct: 1   MGEKMQPPPPPPPCLSLHSHFFSSLKQVEKRLKLDHSSQRDVLHPPPPVPVQTNASSSTE 60

Query: 61  ES-LSTPLYLHFSQTDTSSALQESSEPPLEFLSNSSQTPPSHPQSESNPRNPIDHGQNRG 120
           E  LSTP+YLHF QT+TSS LQESS+PPLEFLSN S +PPSHP+S SNP N ID GQNR 
Sbjct: 61  EDLLSTPMYLHFPQTNTSSTLQESSQPPLEFLSNYSHSPPSHPKSVSNPPNLIDRGQNRD 120

Query: 121 LDHIQRLIQLLGLGDSRDEKELGTKSGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGW 180
           LD IQRLIQLLGL DS DEKELGTK GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGW
Sbjct: 121 LDDIQRLIQLLGLEDSCDEKELGTKIGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGW 180

Query: 181 IEFFWNGGGEEERLEPLRLAYLLLGKAVFASNEGDGCLEGLEFPSTVEDFLLNDPP 235
           IEFF NGGGEE+RLEPLRLAYLLLGKAVFASN  DGCL+GLEFPSTVEDFLLNDPP
Sbjct: 181 IEFFSNGGGEEDRLEPLRLAYLLLGKAVFASNGDDGCLDGLEFPSTVEDFLLNDPP 236

[Close]

BLAST of Clc03G07290 vs. ExPASy TrEMBL
Match: A0A0A0LUG6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G445870 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.3e-102
Identity = 187/228 (82.02%), Postives = 203/228 (89.04%), Query Frame = 0


Query: 7   PQSPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQGILHPPPPFPLETNSSSSAGESLSTPL 66
           P   PP +SLHSNFFSSLKQVEKRLKLDH SQ+ +LHPPPP P+ TNSSS+  +SLSTP+
Sbjct: 2   PLPAPPCLSLHSNFFSSLKQVEKRLKLDHSSQRDVLHPPPPLPVRTNSSSTEEDSLSTPM 61

Query: 67  YLHFSQTDTSSALQESSEPPLEFLSNSSQTPPSHPQSESNPRNPIDHGQNRGLDHIQRLI 126
           YLHF QT+TSS LQESS+ PLEFLS+SSQ+PPSHP+SESNP  PID GQNR +D IQRLI
Sbjct: 62  YLHFPQTNTSSTLQESSQAPLEFLSSSSQSPPSHPKSESNPPKPIDRGQNRDVDDIQRLI 121

Query: 127 QLLGLGDSRDEKELGTKSGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFWNGG 186
           QLLGL DS DEKE G K+GCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFF NGG
Sbjct: 122 QLLGLEDSCDEKEFGAKNGCNGCEGCESGFYSKIVGLKGPKCRKEVERLNGWIEFFSNGG 181

Query: 187 GEEERLEPLRLAYLLLGKAVFASNEGDGCLEGLEFPSTVEDFLLNDPP 235
            EE+RLEPLRLAYLLLGKAVFASN+ DGCLEGLEFPSTVEDFLLNDPP
Sbjct: 182 DEEDRLEPLRLAYLLLGKAVFASNDDDGCLEGLEFPSTVEDFLLNDPP 229

[Close]

BLAST of Clc03G07290 vs. ExPASy TrEMBL
Match: A0A6J1KGL6 (uncharacterized protein LOC111495590 OS=Cucurbita maxima OX=3661 GN=LOC111495590 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 8.3e-94
Identity = 182/241 (75.52%), Postives = 200/241 (82.99%), Query Frame = 0


Query: 1   MGEKM--QPQSPPPSVSLHSNFFSSLKQVEKRLKLDHPSQQGILHPP-----PPFPLETN 60
           MGEKM   P  PPPS+SLHS+FFSSLKQVEKRLKLD+PSQ+  L PP     P  P+E +
Sbjct: 3   MGEKMPPPPPPPPPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEIS 62

Query: 61  SSSSAGESLSTPLYLHFSQTDTSSALQESSEPPLEFLSNSSQTPPSHPQSESNPRNPIDH 120
           SSSS  ESLSTP+YLH SQT+T+S+LQESSEPP EFLSNSS       +SESN  N ID 
Sbjct: 63  SSSSVEESLSTPMYLHLSQTNTASSLQESSEPPPEFLSNSSDL-----KSESNSPNLIDC 122

Query: 121 GQNRGLDHIQRLIQLLGLGDSRDEKELGTKSGCNGCEGCESGFYSKIVGLKGPKCRKEVE 180
           GQNR +D IQRL+QLLG GDS +EKELG +SGCNGCEGCESGFYSKIVGLKGPKC KEVE
Sbjct: 123 GQNRPVDDIQRLVQLLGFGDSFEEKELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVE 182

Query: 181 RLNGWIEFFWNGGGEEERLEPLRLAYLLLGKAVFASNEGDGCLEGLEFPSTVEDFLLNDP 235
           RLNGWI++FW GGGE ERLEPLRLAYLL+GKAVFASN GD CLEGLEFPSTVEDFLLNDP
Sbjct: 183 RLNGWIQYFWTGGGEAERLEPLRLAYLLMGKAVFASNGGDNCLEGLEFPSTVEDFLLNDP 238

[Close]

BLAST of Clc03G07290 vs. ExPASy TrEMBL
Match: A0A6J1END4 (uncharacterized protein LOC111434155 OS=Cucurbita moschata OX=3662 GN=LOC111434155 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.6e-92
Identity = 180/241 (74.69%), Postives = 198/241 (82.16%), Query Frame = 0


Query: 1   MGEKMQPQSPP--PSVSLHSNFFSSLKQVEKRLKLDHPSQQGILHPP-----PPFPLETN 60
           MGEKM P  PP  PS+SLHS+FFSSLKQVEKRLKLD+PSQ+  L PP     P  P+E +
Sbjct: 1   MGEKMPPPPPPPAPSISLHSSFFSSLKQVEKRLKLDNPSQRDALRPPSPRRAPSLPVEIS 60

Query: 61  SSSSAGESLSTPLYLHFSQTDTSSALQESSEPPLEFLSNSSQTPPSHPQSESNPRNPIDH 120
           SSSS  ESLSTP+YLH  QT+T+S+LQESSEPP EFLSNSS       +SESN  N ID 
Sbjct: 61  SSSSVEESLSTPMYLHLPQTNTTSSLQESSEPPPEFLSNSSDL-----KSESNSPNLIDC 120

Query: 121 GQNRGLDHIQRLIQLLGLGDSRDEKELGTKSGCNGCEGCESGFYSKIVGLKGPKCRKEVE 180
           GQNR +D IQRL+QLLGLGDS +E+ELG +SGCNGCEGCESGFYSKIVGLKGPKC KEVE
Sbjct: 121 GQNRPVDDIQRLVQLLGLGDSFEEQELGARSGCNGCEGCESGFYSKIVGLKGPKCGKEVE 180

Query: 181 RLNGWIEFFWNGGGEEERLEPLRLAYLLLGKAVFASNEGDGCLEGLEFPSTVEDFLLNDP 235
           RLNGWI +FW GGGE ERLEPLRLAYLL+GKAVFASN  D CLEGLEFPSTVEDFLLNDP
Sbjct: 181 RLNGWIHYFWTGGGEAERLEPLRLAYLLMGKAVFASNGSDHCLEGLEFPSTVEDFLLNDP 236

The following BLAST results are available for this feature:

BLAST of Clc03G07290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895328.1	4.8e-104	83.77	uncharacterized protein LOC120083579 [Benincasa hispida]	[more]
XP_004147438.2	6.3e-104	82.05	uncharacterized protein LOC101217056 [Cucumis sativus] >XP_031743721.1 uncharact...	[more]
XP_008444181.1	1.1e-103	82.63	PREDICTED: uncharacterized protein LOC103487596 [Cucumis melo] >KAA0053967.1 unc...	[more]
KGN65550.1	2.6e-102	82.02	hypothetical protein Csa_019856 [Cucumis sativus]	[more]
XP_023001462.1	1.7e-93	75.52	uncharacterized protein LOC111495590 [Cucurbita maxima] >XP_023001463.1 uncharac...	[more]

BLAST of Clc03G07290 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc03G07290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UHE6	5.2e-104	82.63	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B9V1	5.2e-104	82.63	uncharacterized protein LOC103487596 OS=Cucumis melo OX=3656 GN=LOC103487596 PE=...	[more]
A0A0A0LUG6	1.3e-102	82.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G445870 PE=4 SV=1	[more]
A0A6J1KGL6	8.3e-94	75.52	uncharacterized protein LOC111495590 OS=Cucurbita maxima OX=3661 GN=LOC111495590...	[more]
A0A6J1END4	4.6e-92	74.69	uncharacterized protein LOC111434155 OS=Cucurbita moschata OX=3662 GN=LOC1114341...	[more]

BLAST of Clc03G07290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G07290.1	Clc03G07290.1	mRNA