Clc03G07210 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCCCTTTCCCCCCACCCTGCACATTTCAACACAAGAAGATAAAACACAAATCAATTCAATCATGAACTCAACCGCTGCCTTCCTCCGCCATGGCTTCTCCATACCACCACAACGTCTCCCGATAACCGCTTCGGTTGCGGGACGACGACTTCCATTGAGCTTCCGTTGCAGCGTGTCTTCGATCCGTCCCTTGGCCGAGAAATGGAATGAGAAGTACAATAATAAATATGGAAGGTGTAACAAGAATAACAATGACATTGATATACGGTGTGGTAACGTGAGAAATGCAGACCCATCAGATACCTTTGAGGATGGCGACAAGTTTCCTTTTCTAAACACCAAAATGGCCTTACAGTCGCTCTTGTGCTTCTCTTCCGATACTGCGGCAGTTGAGCCGCATATGAAACATATAACTGCCGAGAAGGTCATTTTTCCTTCTATGCTCAGTTTCAAATCAACAAAGTTTAACCCTATATTGCATAATCACTTCATTTTCTTTTATGCCTCAAAATTATTTCTTTACTCTATTATTTTATTTTATATATCAAAATTGAAATTTTGTATTACTACACTTTTAATTTACTTTAATTAGTGATGTTAAAACTTAAAAGAAAAGAAAATAGAAGGAATTTAATTAGTTGATCTTTAAATAATTAAAAAAAAAAATCCCCAAACCAAAAGAATCATTGAATTCTGAATTAAATTCTTTATATAACTTTACCACTTTTGCTACTAAATCAAAATCATTAAAGCCTTAAATCTTTTTTTTCCCCTTTTTTTCCCAAATATAGAAAACTAAAAAATTTAGGGTTTTTTTTTTAATTATTTCTTTTTTAATTTTTAGTTTTTGAAAATTAAGCCTATTTACTTCTTATTTACTTAAAACATTTTGCATATTTCTTAACTATAAAAGTTGAATTCTTACCCAAATTCCAAAACCAAAAACAAGTTTTGAAAAACTACATTTTCTCGGTTTTCAAATATTGACTTGGTTTTTGAAAACATTGGTAAAAAGTAGATAGCAAAGTAATAAATTTAGAGGTAAAATAAATGTTGATAGACTTCATTTTCAAAAACTAAAAACCAAAAATCAAATACTTACCAAACCAAACCTTAATTACATACTAATTAAATCATACCATTTAAAACCATTTCTTAAAAAAGTAACTAATAAACATGTGTGACGTCTATTCGTAAAAAGTGTCAAAGAGAGACGTTGGTATTAGACTCTAAAGCTAAGGATTTATTAAACAATTTAGGTACGATGATAAAATTATCGACTTCTTTATAAAAATAATAATGTTTTAATCAATTTAACTATACACGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTGGCAGGAAAGAGCATTAAAAGCATTGTTAGATGAAGGGTCTGATGAGGCAGAGAGGATAATGATGAATGTGTACAATGAATACCACAACTCTACCGAAGGGCAGATTAAATATGATGCTAGTTTGGCCCTCATACAAATTCTCATCTACACGGTATTACTATTTTTCACTTTCAATCAACCTACTTTATACATGTAAAGTAGGCTCAAATTTTTAATCTATATCTAACCTCTATATATATATATATATATATATGAAAAAGAATTATATTAATTAAAATTATAAATTAATAATTATATCAATTTAAATTATAAATTTTTGTAAATATATCATTCTTAACGTTTTGTTTGATTCAACATCTGGAGTGAGAGATTTAAAATTTTACTCGTTAACTTTGAAAAGCAAATCAATTTAGACTTTGTAAGATTTGATTTTTTTTAAAATCATTTATACATCAATTCTAAATAGTCTATTTTGTTTAATACGATATTTGAAGAAGTTTATATAAGTGTAAGAATTGATGCAAAGATGATTTTCAAAAGTAATTTGTAGATATTATTTCATGAATACAAATATTAAATATTTGAGATTTAAATGTTTGGGATAATTAATGTCTATGTTTAGATATGTAGGATAATTAATGTTCGGAAGTTAGATATGTGTGCTTGATTTACCAACTAAATAATTACTCAATTAAATATAAGAGAACAATAAATGTAGTAATAAATTAAATTTAGTATTATTTTTAAAATATTGTTATATTAATTCATTGTTTAATCACTTAAAATAAAATAAATGGTTATTTTTATATGATCGTTAATTAAACTTAATTTAATTATTTAATTTCTAGTAATTATTTTAACTAGCAAAACTATTAAAAATATTTTTAAATATAGAAAACTCTTCAAATATTTTCAAATATCTATTAATGTCTATCATATGGCTATATTTAAAAACAACCTTTAATTTAATAGCTAAAAATAATTAAATAAATATAAATTGATTAGAATATTAATACTTAGTAATAAATATTTATATTAAATAGTTAATATAACCTAGAATATAAATTGTAAATGTGTTAGATGAAATTATTAATCGTAAATTGTATATTTATATTTGATAATTAGTTAAAATTAGTCGCGATGGTTAATTGATATTAATTAATTAATTAATTAGGTTATATTTTTACTGTTCATTTCTATCTATAAAAATCTCATATATATGAAGGGTATTAGAAAACTAATGTTAGATGGATTTTAAAATAAAATTCCCTGAATAATAATTCTTGAGTTTTAAAAAGTTAAATCTTGTGAAACAAACAAGGATATTAAATGTCTATCTGAAATTCCTCACCAAATCCTGCGAAACAAACAAATCCTTAACTCATATTTGGGAGTGGTTAAATTTAATAGAAGATTTGAGTGGATCGAGGCTTATATTTCTGACCTTACCACTACTCCGAAAGATCATTTTAATGTGGTTCAGCAAGAAATCTTGAGGTATGGTTTGTGTGTTGTTATGGTAGATGCGCCTTGTCGTGAGGGTTTGTAGAGAGTAGGATTTGGTGGGATTGTTGGTTCCTCGACTAGGGCTATTAAGGCTGTGATGATGGGTTTTTAGGATCAATTCTTTAGTCATCTCGGTGCTAAATTGGTTGAAATTTTAAAAGGACTTCGTTTAGCAGGTTGTTTGGGTTTACGAACGATTTTGATTTTGTCTGATTCTTTGGTTTCTATTCAAATGCTTCGTGGGGAGTCGACTGATTAGATTGAAGTGATTAATGTTCTTTCAGACATCAAGAGTCATTGTGCTTATTTCATTTATGTTTCTTTCTAGTATTTGCCTCTTAATTCGAATACAACGACACATTTGTTGGCCCAAGTTGGATTTTTGGAAGTAGCTGTTTGTCGCTAGAGTGCATTTCTAAGTGGATCATGTCTGATTTTAGGCATGATTTTTCTTTTATTATTGAGCATTGAGTCTGTTAGTTTTTTTTTTTGTTGGTTTGTGTATTCTAAAAAAAGATATCAATTAAAAGCATGTTTTAGAGTAATTGTGAAAATAATAAAAAAAATATTTTGACTATTTCAAAATCAATCCCAAAGATACCATTAATAAATTTACTTATAAGGATTTAAGAATTTAAGAATTAATATAGTTATAAGTCTCCATCATGTTTTCTAGTAAAGTTGAGAGAAGTTGAGAGAAAATGTGTAAATTGATATTTTTGTTTTTGTTGTTGTGTATTTATATTTATTTGAATACAGGGGAAAAGCCGATGCTTGAATTATGCTCTTGAGAGATTGAAAGAGATAGCACGCATACAAGACAGACCAAATGATCAAAGGCCTCTTCTCTACTATGTAAGTTGTTTGGTTGTAAATTGATCATTTTGGTTTTGGTTTTAAATTTTGATTACTCATTTATTTTTTTTAATATAACAAAATGAGTCAAACTATTTATAAATATAGAAAAATTTCACTGTCTATCAGCGATAAATCACGATAGACGTCTATTACAACTGCAATAGAGAAGTCTATCGCAGTCTATTGCTAATAGAAAGTGAAATTTTTCTATATTTGTAAATAATTTGATATTTTTTCTATTTATAATAATTTTCTTTTTTCTTCCCTAGATTTAATTAGTAGTTTCAAAATGTTATAGATTTACCTTTACAAATATTTGAGTTTTGTTTCAGTTTTGTCCTTAGATTTCGAGATTTGCATTTTAAAATCTAAATACTCACTTCAGTCTTCGGTGTCAATATCTATTAATTAATTTAAAATAGTTATGAAGTGAAATTCTAAAATTACTCTTAATAATGATGAAAAAAAATTTATGAAACCTAATTAATTATAGTTTTTTAATTTTAAAAAAATTACTAAATAGACATTAACACTAAATATTGAAAGTGAGTACTTAGTAAAAAATTGAAGTTAAATGTGTAAATCTTGAAACCTAAGGATCAAATTGAAAAAAAAACTCAAATATCAAGGGTAAAATGATAACATTTTGAAAACTAGAGACTAAATTAAAATCAAACTCATAACATAAGAACTAAAACTGTACCATTTTGAAACCTAAAGGACCAAAGTTAAAGAAATCAACGTAGACATTTCGGAAGTATATATTGATCAATAATATAGACATTTCAAAAGTATATATGGATCAAAGCTAAAAGTATAAGAATCAAAATGACTTATAGCTAAAAGTGCAAAGTTAGAGATAAGTATATACATTTAAATACTATGTTGGGTTCTAAACTTTTAATTTTAGTTCATAATTTTGATCTCATATACTTACCAAACGTCCATTTTCATCCCAATAATTTGAAAAATTAAACATTTTTCTACTATAAAAATGAAAATGAAGGGACCAAAATGATCTGTTTTTAAGAATATAGGAATCAAAGTGAAAGTTTTGAAAGTACAAAGATCATAATAAACCAAAGTTTAAAGTGCAAGGATGAAAATGATTCAATAACGAAAGTGTAAGAACCAAAATAGTATTTAAACCAAATATCATCAATTTTAGCCTCTTTTTTTAGAAAATTATTTTAAATGACAAAACTGTTGAAAATATTTACAAATAATAGCAAAATATCACAATCTATCTGTGATAGACTGCAATAGATCGCGATACATTACTATTTATGTCTATCATAATACATATAGTAATCTATCGCATATAAGCAGTAAAATTTTGTTATATTTATAAATATCTTGATTTATTTTTCTATATTTGAAACTTTTTTTTTTTTTCCTTCCTTGTATAGTAAATTTGAAGTTTAAGGCAAATAATATTTGACAATCTTCATGCAGGCTGTTATATATACCTTATTAGACCAATACCTTATCGCTAAAAGATATTGGAGGGCTTACGTAGAGTCTATAAGAAAGGGACCAACCGGGATTTAATGATAACATTGTAATAACATATGGGGAAATTAATTTGTATTTTTAAAATTCTTGTTTTTTGTTATTTATTCTTTGTGCCACTTTGTGTATCTACTTTTAAAAAAATTTCCATTTTACTAAGACCATGCATTTCCCCAAATTTATCTATGTAATTCAAGTACTATTGGAAAGAATCTC CCTCCCTTTCCCCCCACCCTGCACATTTCAACACAAGAAGATAAAACACAAATCAATTCAATCATGAACTCAACCGCTGCCTTCCTCCGCCATGGCTTCTCCATACCACCACAACGTCTCCCGATAACCGCTTCGGTTGCGGGACGACGACTTCCATTGAGCTTCCGTTGCAGCGTGTCTTCGATCCGTCCCTTGGCCGAGAAATGGAATGAGAAGTACAATAATAAATATGGAAGGTGTAACAAGAATAACAATGACATTGATATACGGTGTGGTAACGTGAGAAATGCAGACCCATCAGATACCTTTGAGGATGGCGACAAGTTTCCTTTTCTAAACACCAAAATGGCCTTACAGTCGCTCTTGTGCTTCTCTTCCGATACTGCGGCAGTTGAGCCGCATATGAAACATATAACTGCCGAGAAGGAAAGAGCATTAAAAGCATTGTTAGATGAAGGGTCTGATGAGGCAGAGAGGATAATGATGAATGTGTACAATGAATACCACAACTCTACCGAAGGGCAGATTAAATATGATGCTAGTTTGGCCCTCATACAAATTCTCATCTACACGGGGAAAAGCCGATGCTTGAATTATGCTCTTGAGAGATTGAAAGAGATAGCACGCATACAAGACAGACCAAATGATCAAAGGCCTCTTCTCTACTATGCTGTTATATATACCTTATTAGACCAATACCTTATCGCTAAAAGATATTGGAGGGCTTACGTAGAGTCTATAAGAAAGGGACCAACCGGGATTTAATGATAACATTGTAATAACATATGGGGAAATTAATTTGTATTTTTAAAATTCTTGTTTTTTGTTATTTATTCTTTGTGCCACTTTGTGTATCTACTTTTAAAAAAATTTCCATTTTACTAAGACCATGCATTTCCCCAAATTTATCTATGTAATTCAAGTACTATTGGAAAGAATCTC ATGAACTCAACCGCTGCCTTCCTCCGCCATGGCTTCTCCATACCACCACAACGTCTCCCGATAACCGCTTCGGTTGCGGGACGACGACTTCCATTGAGCTTCCGTTGCAGCGTGTCTTCGATCCGTCCCTTGGCCGAGAAATGGAATGAGAAGTACAATAATAAATATGGAAGGTGTAACAAGAATAACAATGACATTGATATACGGTGTGGTAACGTGAGAAATGCAGACCCATCAGATACCTTTGAGGATGGCGACAAGTTTCCTTTTCTAAACACCAAAATGGCCTTACAGTCGCTCTTGTGCTTCTCTTCCGATACTGCGGCAGTTGAGCCGCATATGAAACATATAACTGCCGAGAAGGAAAGAGCATTAAAAGCATTGTTAGATGAAGGGTCTGATGAGGCAGAGAGGATAATGATGAATGTGTACAATGAATACCACAACTCTACCGAAGGGCAGATTAAATATGATGCTAGTTTGGCCCTCATACAAATTCTCATCTACACGGGGAAAAGCCGATGCTTGAATTATGCTCTTGAGAGATTGAAAGAGATAGCACGCATACAAGACAGACCAAATGATCAAAGGCCTCTTCTCTACTATGCTGTTATATATACCTTATTAGACCAATACCTTATCGCTAAAAGATATTGGAGGGCTTACGTAGAGTCTATAAGAAAGGGACCAACCGGGATTTAA MNSTAAFLRHGFSIPPQRLPITASVAGRRLPLSFRCSVSSIRPLAEKWNEKYNNKYGRCNKNNNDIDIRCGNVRNADPSDTFEDGDKFPFLNTKMALQSLLCFSSDTAAVEPHMKHITAEKERALKALLDEGSDEAERIMMNVYNEYHNSTEGQIKYDASLALIQILIYTGKSRCLNYALERLKEIARIQDRPNDQRPLLYYAVIYTLLDQYLIAKRYWRAYVESIRKGPTGI Homology
BLAST of Clc03G07210 vs. NCBI nr
Match: XP_038895250.1 (uncharacterized protein LOC120083532 [Benincasa hispida]) HSP 1 Score: 225.3 bits (573), Expect = 5.4e-55 Identity = 130/232 (56.03%), Postives = 157/232 (67.67%), Query Frame = 0
BLAST of Clc03G07210 vs. NCBI nr
Match: XP_004151210.2 (uncharacterized protein LOC101202955 [Cucumis sativus] >KGN65542.1 hypothetical protein Csa_020066 [Cucumis sativus]) HSP 1 Score: 161.0 bits (406), Expect = 1.2e-35 Identity = 96/237 (40.51%), Postives = 142/237 (59.92%), Query Frame = 0
BLAST of Clc03G07210 vs. NCBI nr
Match: XP_022994895.1 (uncharacterized protein LOC111490483 [Cucurbita maxima]) HSP 1 Score: 139.4 bits (350), Expect = 3.9e-29 Identity = 91/204 (44.61%), Postives = 127/204 (62.25%), Query Frame = 0
BLAST of Clc03G07210 vs. NCBI nr
Match: KAG6573362.1 (hypothetical protein SDJN03_27249, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 134.4 bits (337), Expect = 1.2e-27 Identity = 95/230 (41.30%), Postives = 120/230 (52.17%), Query Frame = 0
BLAST of Clc03G07210 vs. NCBI nr
Match: XP_008444310.1 (PREDICTED: uncharacterized protein LOC103487676 [Cucumis melo]) HSP 1 Score: 132.9 bits (333), Expect = 3.6e-27 Identity = 104/245 (42.45%), Postives = 137/245 (55.92%), Query Frame = 0
BLAST of Clc03G07210 vs. ExPASy TrEMBL
Match: A0A0A0LXK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G441330 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 6.0e-36 Identity = 96/237 (40.51%), Postives = 142/237 (59.92%), Query Frame = 0
BLAST of Clc03G07210 vs. ExPASy TrEMBL
Match: A0A6J1K2L3 (uncharacterized protein LOC111490483 OS=Cucurbita maxima OX=3661 GN=LOC111490483 PE=4 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 1.9e-29 Identity = 91/204 (44.61%), Postives = 127/204 (62.25%), Query Frame = 0
BLAST of Clc03G07210 vs. ExPASy TrEMBL
Match: A0A1S3BA19 (uncharacterized protein LOC103487676 OS=Cucumis melo OX=3656 GN=LOC103487676 PE=4 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 1.8e-27 Identity = 104/245 (42.45%), Postives = 137/245 (55.92%), Query Frame = 0
BLAST of Clc03G07210 vs. ExPASy TrEMBL
Match: A0A6J1GTH1 (uncharacterized protein LOC111457324 OS=Cucurbita moschata OX=3662 GN=LOC111457324 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 6.7e-27 Identity = 97/230 (42.17%), Postives = 119/230 (51.74%), Query Frame = 0
BLAST of Clc03G07210 vs. ExPASy TrEMBL
Match: A0A6J1CHE7 (uncharacterized protein LOC111010906 OS=Momordica charantia OX=3673 GN=LOC111010906 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 6.7e-19 Identity = 82/235 (34.89%), Postives = 117/235 (49.79%), Query Frame = 0
BLAST of Clc03G07210 vs. TAIR 10
Match: AT2G34540.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 3.2e-05 Identity = 45/164 (27.44%), Postives = 76/164 (46.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|