Clc03G07160 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G07160
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	101 kDa malaria antigen-like
Location	ClcChr03: 7306363 .. 7307174 (+)
RNA-Seq Expression	Clc03G07160
Synteny	Clc03G07160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAACTTGTTATAAAAAGGTAAATCCTCTTGAAATCTCTTTCTCAAACTCCAACCACTCAATCTCTCAACTCAAAAACTCCATTATATTTTCTCTTCTTCCTCCTCCTCCTTTTTCAACCCAAAATGTCATCTAATTCAATTTCACCTGATCAAAATCTATTAGTAGTAGACAATTATTCATTTCTTCCCTACAACATACCCAATTCACAACCTTATAATAAATATAGAAATGATTACACATTAGCCTTCTTCTCTTCCCTATTATTCCTTCTCTCCATTTTCATTATCTTCATTTCCATCTTCAAAAACCTCTCTTTTTCATCTCTCTTCAACAGCACCATTTTCTGGTTCTTCATTTCCAACACTCTCATCTTCATAATTGCTGCTGATTATGGTGTTTTCTCTCTCTCACAACACAAAAGTTTCCATCTTTATGAAGATTTCGCACCACCCAACCCAAAATTAACTCATTTTCAACTTCAAAGCTCTTCATTGGCAGTATTTGATGAAAAGAAAGAAATCCCCCATGAGAGATTGGAAATTGTGGTTCAACGTCGCCGACTCGACCCTCCACTGAAGACGACTCCGGCGAGAACTTACCGGCGGAGGAAGTCGGAGAAACAAACAAGAATTGTATCAAAGGAGAACAAGAAAATGATGGGGAAGAGATCAGAAAGTGTAAAGTATGAAGCAAAGGAATTAGAAGAAAATGAATTTGAAAAGATGACAGATGAAGAATTGAACAGAAGAGTGGAGGAGTTTATTCAAAGATTTAATAGACAGATGAGACTTCAAACTAAAATCAACTGA

mRNA sequence

AAAAACTTGTTATAAAAAGGTAAATCCTCTTGAAATCTCTTTCTCAAACTCCAACCACTCAATCTCTCAACTCAAAAACTCCATTATATTTTCTCTTCTTCCTCCTCCTCCTTTTTCAACCCAAAATGTCATCTAATTCAATTTCACCTGATCAAAATCTATTAGTAGTAGACAATTATTCATTTCTTCCCTACAACATACCCAATTCACAACCTTATAATAAATATAGAAATGATTACACATTAGCCTTCTTCTCTTCCCTATTATTCCTTCTCTCCATTTTCATTATCTTCATTTCCATCTTCAAAAACCTCTCTTTTTCATCTCTCTTCAACAGCACCATTTTCTGGTTCTTCATTTCCAACACTCTCATCTTCATAATTGCTGCTGATTATGGTGTTTTCTCTCTCTCACAACACAAAAGTTTCCATCTTTATGAAGATTTCGCACCACCCAACCCAAAATTAACTCATTTTCAACTTCAAAGCTCTTCATTGGCAGTATTTGATGAAAAGAAAGAAATCCCCCATGAGAGATTGGAAATTGTGGTTCAACGTCGCCGACTCGACCCTCCACTGAAGACGACTCCGGCGAGAACTTACCGGCGGAGGAAGTCGGAGAAACAAACAAGAATTGTATCAAAGGAGAACAAGAAAATGATGGGGAAGAGATCAGAAAGTGTAAAGTATGAAGCAAAGGAATTAGAAGAAAATGAATTTGAAAAGATGACAGATGAAGAATTGAACAGAAGAGTGGAGGAGTTTATTCAAAGATTTAATAGACAGATGAGACTTCAAACTAAAATCAACTGA

Coding sequence (CDS)

ATGTCATCTAATTCAATTTCACCTGATCAAAATCTATTAGTAGTAGACAATTATTCATTTCTTCCCTACAACATACCCAATTCACAACCTTATAATAAATATAGAAATGATTACACATTAGCCTTCTTCTCTTCCCTATTATTCCTTCTCTCCATTTTCATTATCTTCATTTCCATCTTCAAAAACCTCTCTTTTTCATCTCTCTTCAACAGCACCATTTTCTGGTTCTTCATTTCCAACACTCTCATCTTCATAATTGCTGCTGATTATGGTGTTTTCTCTCTCTCACAACACAAAAGTTTCCATCTTTATGAAGATTTCGCACCACCCAACCCAAAATTAACTCATTTTCAACTTCAAAGCTCTTCATTGGCAGTATTTGATGAAAAGAAAGAAATCCCCCATGAGAGATTGGAAATTGTGGTTCAACGTCGCCGACTCGACCCTCCACTGAAGACGACTCCGGCGAGAACTTACCGGCGGAGGAAGTCGGAGAAACAAACAAGAATTGTATCAAAGGAGAACAAGAAAATGATGGGGAAGAGATCAGAAAGTGTAAAGTATGAAGCAAAGGAATTAGAAGAAAATGAATTTGAAAAGATGACAGATGAAGAATTGAACAGAAGAGTGGAGGAGTTTATTCAAAGATTTAATAGACAGATGAGACTTCAAACTAAAATCAACTGA

Protein sequence

MSSNSISPDQNLLVVDNYSFLPYNIPNSQPYNKYRNDYTLAFFSSLLFLLSIFIIFISIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYGVFSLSQHKSFHLYEDFAPPNPKLTHFQLQSSSLAVFDEKKEIPHERLEIVVQRRRLDPPLKTTPARTYRRRKSEKQTRIVSKENKKMMGKRSESVKYEAKELEENEFEKMTDEELNRRVEEFIQRFNRQMRLQTKIN

Homology

[Close]

BLAST of Clc03G07160 vs. NCBI nr
Match: XP_038877172.1 (uncharacterized protein LOC120069472 [Benincasa hispida])

HSP 1 Score: 336.7 bits (862), Expect = 1.6e-88
Identity = 195/229 (85.15%), Postives = 201/229 (87.77%), Query Frame = 0


Query: 1   MSSNSISPDQNLLVVDNYSFLPYNIPNSQP-YNKYRNDYTLAFFSSLLFLLSIFIIFISI 60
           MSSNSISP QNLLVVDN SFLPYN P SQ  YNKY NDY LAFFSSLLFLLSIFIIFISI
Sbjct: 1   MSSNSISP-QNLLVVDN-SFLPYNKPKSQSNYNKYANDYILAFFSSLLFLLSIFIIFISI 60

Query: 61  FKNLSFSSLFNSTIFWFFISNTLIFIIAADYGVFSLSQHKSFHLYEDFAPPNPKLTHFQL 120
           FKNLS  SLFNSTIFWFFISNTLIFIIA DYGVFSL QHKSFHLYEDF+P NPKL HF+L
Sbjct: 61  FKNLSLPSLFNSTIFWFFISNTLIFIIAVDYGVFSLPQHKSFHLYEDFSPSNPKLNHFRL 120

Query: 121 QSSSLAVFDEKKEIPHERLEIVVQRRRLDPPLKTTPARTYRRRKSEKQTRIVSKENKKMM 180
            SSSL VFDEKKE   E+LE+VVQ R+LD P K TPART RRRKSEK   IVSKE+ KMM
Sbjct: 121 PSSSLVVFDEKKETTREKLELVVQGRQLDSPWKMTPARTCRRRKSEKPKGIVSKESNKMM 180

Query: 181 GKRSESVKYEAKELEENEFEKMTDEELNRRVEEFIQRFNRQMRLQTKIN 229
           GKRSESVKYEAKELEENEFEKMTDEELNRRVEEFIQRFNRQMRLQTKIN
Sbjct: 181 GKRSESVKYEAKELEENEFEKMTDEELNRRVEEFIQRFNRQMRLQTKIN 227

[Close]

BLAST of Clc03G07160 vs. NCBI nr
Match: KAE8653186.1 (hypothetical protein Csa_020019 [Cucumis sativus])

HSP 1 Score: 316.6 bits (810), Expect = 1.7e-82
Identity = 188/236 (79.66%), Postives = 202/236 (85.59%), Query Frame = 0


Query: 1   MSSNSISPDQNLLVVDN-YSFLPYNIPNSQPYNKYRNDYTLAFFSSLLFLLSIFIIFISI 60
           MS NSIS  QNL+VV+N   FLPY+ P  QPYNKY NDY LAFFSSLLFLLSIFIIFISI
Sbjct: 1   MSPNSISRPQNLVVVENSIPFLPYDKPKPQPYNKYTNDYLLAFFSSLLFLLSIFIIFISI 60

Query: 61  FKNLSFSSLFNSTIFWFFISNTLIFIIAADYGVFSLSQHKSFHLYED--FAPPNPKLTHF 120
           FKNLSFSSLFNST+FWFFISNTLIFIIA DYG+FSLSQHKSFHLYED  ++PPNPKLTHF
Sbjct: 61  FKNLSFSSLFNSTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHF 120

Query: 121 QLQSSSLAVFDEKKEIPHERLEIVVQRRRLDPPLK--TTPARTYRRRKSEKQTRIVSKE- 180
           QLQ+SSL VFDEK+E P E+LE VVQ +RLD P K  TTP RTY RRKSEK  RIVS E 
Sbjct: 121 QLQTSSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEI 180

Query: 181 NKKMMGK-RSESVKYEAKELE-ENEFEKMTDEELNRRVEEFIQRFNRQMRLQTKIN 229
           +KKMMGK RSESVK E KELE ENEF KMTDEELNRRVEEFIQRFN+QMRLQTK+N
Sbjct: 181 SKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTKLN 236

[Close]

BLAST of Clc03G07160 vs. NCBI nr
Match: XP_023001467.1 (uncharacterized protein LOC111495593 [Cucurbita maxima])

HSP 1 Score: 258.1 bits (658), Expect = 7.3e-65
Identity = 154/223 (69.06%), Postives = 171/223 (76.68%), Query Frame = 0


Query: 6   ISPDQNLLVVDNYSFLPYN-IPNSQPYNKYRNDYTLAFFSSLLFLLSIFIIFISIFKNLS 65
           +S   NL+ +DN  F+PY   P    YNKY ND  LAFFSSLLFLLS    F  IFKNLS
Sbjct: 1   MSSHSNLVSLDN-PFMPYKPKPKPNTYNKYTNDCILAFFSSLLFLLS----FCIIFKNLS 60

Query: 66  FSSLFNSTIFWFFISNTLIFIIAADYGVFSLSQHKSFHLYEDFAPPNPKLTHFQLQSSSL 125
           FSSLFNSTIFWFFISNTLIFIIAADY  FSLSQ+K  H YE ++PPNPK+THFQ Q+SS 
Sbjct: 61  FSSLFNSTIFWFFISNTLIFIIAADYAYFSLSQYKRSHFYEHYSPPNPKITHFQHQTSSF 120

Query: 126 AVFDEKKEIPHERLEIVVQRRRLD-PPLKTTPARTYRRRKSEKQTRIVSKENKKMMGKRS 185
            VF+EK+E P   L+ +VQ R    PPLKTTP RTY+R KSEK  R VSKE+KK M KRS
Sbjct: 121 VVFEEKREYPDGNLQNIVQDRCDSLPPLKTTPVRTYQRSKSEKPKRTVSKESKKKMAKRS 180

Query: 186 ESVKYEAKELEENEFEKMTDEELNRRVEEFIQRFNRQMRLQTK 227
           ES KYE KELEENE+ KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 181 ESGKYEGKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 218

[Close]

BLAST of Clc03G07160 vs. NCBI nr
Match: XP_022927149.1 (uncharacterized protein LOC111434084 [Cucurbita moschata])

HSP 1 Score: 255.0 bits (650), Expect = 6.2e-64
Identity = 154/223 (69.06%), Postives = 169/223 (75.78%), Query Frame = 0


Query: 6   ISPDQNLLVVDNYSFLPYN-IPNSQPYNKYRNDYTLAFFSSLLFLLSIFIIFISIFKNLS 65
           +S   NL+ VDN  F+PY   P     NKY NDY LAFFSSLL LLS    F  IFKNLS
Sbjct: 1   MSSHSNLVSVDN-PFMPYKPKPKPNTCNKYTNDYILAFFSSLLLLLS----FCIIFKNLS 60

Query: 66  FSSLFNSTIFWFFISNTLIFIIAADYGVFSLSQHKSFHLYEDFAPPNPKLTHFQLQSSSL 125
           FSSLFNST+FWFFISN LIFIIAADY  FSLSQ+K  HLYE ++PPNPK+THFQ Q+SS 
Sbjct: 61  FSSLFNSTMFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSF 120

Query: 126 AVFDEKKEIPHERLE-IVVQRRRLDPPLKTTPARTYRRRKSEKQTRIVSKENKKMMGKRS 185
            VFDEK+E P   L+  V +R    PPLKTTP RTYRR KSEK  R VSKE+KK M KRS
Sbjct: 121 VVFDEKREYPDGNLQNFVPERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRS 180

Query: 186 ESVKYEAKELEENEFEKMTDEELNRRVEEFIQRFNRQMRLQTK 227
           ES KYE KELEENE+ KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 181 ESGKYEEKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 218

[Close]

BLAST of Clc03G07160 vs. NCBI nr
Match: XP_023520225.1 (uncharacterized protein LOC111783530 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.4 bits (568), Expect = 2.0e-54
Identity = 134/188 (71.28%), Postives = 145/188 (77.13%), Query Frame = 0


Query: 40  LAFFSSLLFLLSIFIIFISIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYGVFSLSQHK 99
           LAFFSSLLFLL     F  IFKNLSFSSLFNST+FWFFISN LIFIIAADY  FSL+Q+K
Sbjct: 2   LAFFSSLLFLL----FFCIIFKNLSFSSLFNSTMFWFFISNALIFIIAADYAYFSLTQYK 61

Query: 100 SFHLYEDFAPPNPKLTHFQLQSSSLAVFDEKKEIPHERLEIVVQRRRLDPP-LKTTPART 159
             HLYE ++PPNPK+THFQ Q+SS  VFDEK+E P   L   VQ R    P LKTTP RT
Sbjct: 62  RSHLYEHYSPPNPKMTHFQRQTSSFVVFDEKREYPDGNLRNFVQERCDSMPLLKTTPVRT 121

Query: 160 YRRRKSEKQTRIVSKENKKMMGKRSESVKYEAKELEENEFEKMTDEELNRRVEEFIQRFN 219
           Y R KSEK  R VSKE+KK M KR ES  YE KELEENE+ KMTDEELNRRVEEFIQRFN
Sbjct: 122 YERSKSEKPKRSVSKESKKKMAKRLESGMYEEKELEENEYSKMTDEELNRRVEEFIQRFN 181

Query: 220 RQMRLQTK 227
            QMRL+TK
Sbjct: 182 TQMRLETK 185

[Close]

BLAST of Clc03G07160 vs. ExPASy TrEMBL
Match: A0A6J1KGM0 (uncharacterized protein LOC111495593 OS=Cucurbita maxima OX=3661 GN=LOC111495593 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.5e-65
Identity = 154/223 (69.06%), Postives = 171/223 (76.68%), Query Frame = 0


Query: 6   ISPDQNLLVVDNYSFLPYN-IPNSQPYNKYRNDYTLAFFSSLLFLLSIFIIFISIFKNLS 65
           +S   NL+ +DN  F+PY   P    YNKY ND  LAFFSSLLFLLS    F  IFKNLS
Sbjct: 1   MSSHSNLVSLDN-PFMPYKPKPKPNTYNKYTNDCILAFFSSLLFLLS----FCIIFKNLS 60

Query: 66  FSSLFNSTIFWFFISNTLIFIIAADYGVFSLSQHKSFHLYEDFAPPNPKLTHFQLQSSSL 125
           FSSLFNSTIFWFFISNTLIFIIAADY  FSLSQ+K  H YE ++PPNPK+THFQ Q+SS 
Sbjct: 61  FSSLFNSTIFWFFISNTLIFIIAADYAYFSLSQYKRSHFYEHYSPPNPKITHFQHQTSSF 120

Query: 126 AVFDEKKEIPHERLEIVVQRRRLD-PPLKTTPARTYRRRKSEKQTRIVSKENKKMMGKRS 185
            VF+EK+E P   L+ +VQ R    PPLKTTP RTY+R KSEK  R VSKE+KK M KRS
Sbjct: 121 VVFEEKREYPDGNLQNIVQDRCDSLPPLKTTPVRTYQRSKSEKPKRTVSKESKKKMAKRS 180

Query: 186 ESVKYEAKELEENEFEKMTDEELNRRVEEFIQRFNRQMRLQTK 227
           ES KYE KELEENE+ KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 181 ESGKYEGKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 218

[Close]

BLAST of Clc03G07160 vs. ExPASy TrEMBL
Match: A0A6J1EH73 (uncharacterized protein LOC111434084 OS=Cucurbita moschata OX=3662 GN=LOC111434084 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 3.0e-64
Identity = 154/223 (69.06%), Postives = 169/223 (75.78%), Query Frame = 0


Query: 6   ISPDQNLLVVDNYSFLPYN-IPNSQPYNKYRNDYTLAFFSSLLFLLSIFIIFISIFKNLS 65
           +S   NL+ VDN  F+PY   P     NKY NDY LAFFSSLL LLS    F  IFKNLS
Sbjct: 1   MSSHSNLVSVDN-PFMPYKPKPKPNTCNKYTNDYILAFFSSLLLLLS----FCIIFKNLS 60

Query: 66  FSSLFNSTIFWFFISNTLIFIIAADYGVFSLSQHKSFHLYEDFAPPNPKLTHFQLQSSSL 125
           FSSLFNST+FWFFISN LIFIIAADY  FSLSQ+K  HLYE ++PPNPK+THFQ Q+SS 
Sbjct: 61  FSSLFNSTMFWFFISNALIFIIAADYAYFSLSQYKRSHLYEHYSPPNPKMTHFQHQTSSF 120

Query: 126 AVFDEKKEIPHERLE-IVVQRRRLDPPLKTTPARTYRRRKSEKQTRIVSKENKKMMGKRS 185
            VFDEK+E P   L+  V +R    PPLKTTP RTYRR KSEK  R VSKE+KK M KRS
Sbjct: 121 VVFDEKREYPDGNLQNFVPERCDSLPPLKTTPVRTYRRSKSEKPKRSVSKESKKKMAKRS 180

Query: 186 ESVKYEAKELEENEFEKMTDEELNRRVEEFIQRFNRQMRLQTK 227
           ES KYE KELEENE+ KMTDEELNRRVEEFIQRFN QMRL+TK
Sbjct: 181 ESGKYEEKELEENEYSKMTDEELNRRVEEFIQRFNTQMRLETK 218

[Close]

BLAST of Clc03G07160 vs. ExPASy TrEMBL
Match: A0A0A0M033 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435810 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 7.4e-63
Identity = 156/236 (66.10%), Postives = 170/236 (72.03%), Query Frame = 0


Query: 1   MSSNSISPDQNLLVVDN-YSFLPYNIPNSQPYNKYRNDYTLAFFSSLLFLLSIFIIFISI 60
           MS NSIS  QNL+VV+N   FLPY+ P  QPYNKY NDY                     
Sbjct: 1   MSPNSISRPQNLVVVENSIPFLPYDKPKPQPYNKYTNDY--------------------- 60

Query: 61  FKNLSFSSLFNSTIFWFFISNTLIFIIAADYGVFSLSQHKSFHLYED--FAPPNPKLTHF 120
                       T+FWFFISNTLIFIIA DYG+FSLSQHKSFHLYED  ++PPNPKLTHF
Sbjct: 61  -----------FTVFWFFISNTLIFIIAVDYGLFSLSQHKSFHLYEDYYYSPPNPKLTHF 120

Query: 121 QLQSSSLAVFDEKKEIPHERLEIVVQRRRLDPPLK--TTPARTYRRRKSEKQTRIVSKE- 180
           QLQ+SSL VFDEK+E P E+LE VVQ +RLD P K  TTP RTY RRKSEK  RIVS E 
Sbjct: 121 QLQTSSLVVFDEKRETPDEKLETVVQSQRLDSPSKNTTTPVRTYLRRKSEKPKRIVSMEI 180

Query: 181 NKKMMGK-RSESVKYEAKELE-ENEFEKMTDEELNRRVEEFIQRFNRQMRLQTKIN 229
           +KKMMGK RSESVK E KELE ENEF KMTDEELNRRVEEFIQRFN+QMRLQTK+N
Sbjct: 181 SKKMMGKRRSESVKNEGKELEDENEFAKMTDEELNRRVEEFIQRFNKQMRLQTKLN 204

[Close]

BLAST of Clc03G07160 vs. ExPASy TrEMBL
Match: A0A2N9GT34 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30393 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.9e-20
Identity = 83/186 (44.62%), Postives = 115/186 (61.83%), Query Frame = 0


Query: 43  FSSLLFLLSIFIIFISIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYGVFSLSQHKSFH 102
           F + LF + I+I  + IF NLS S+LFN+T FWFF+SNTLI IIA DYG +S S+ K   
Sbjct: 32  FYAFLFSIFIYISILYIF-NLSPSTLFNTTKFWFFLSNTLILIIAVDYGAYSSSKEKQ-D 91

Query: 103 LYEDFAPPNPKLTHFQLQSSSLAVF-DEKKEIPHERLEIVVQRRRLDPPLKTTPARTYRR 162
            Y+++            Q  ++  F  +  E   E +E++      +P  +   A+ YRR
Sbjct: 92  FYQEYV--------MDTQVKNVPSFVSQHPETIKEVVEVL-----QEPEKEKIQAKPYRR 151

Query: 163 RKSEKQTRIVSKENKKMMGKRSESVKYE-AKELEENEFEKMTDEELNRRVEEFIQRFNRQ 222
            KSEK  R++  E+K ++ + SE+ K+E    LEENEF  M+DEELNRRVEEFIQRFNRQ
Sbjct: 152 SKSEKTKRVLIDESKNIVLRMSETAKHERTPSLEENEFSSMSDEELNRRVEEFIQRFNRQ 202

Query: 223 MRLQTK 227
           +RLQ +
Sbjct: 212 IRLQAR 202

[Close]

BLAST of Clc03G07160 vs. ExPASy TrEMBL
Match: A0A7N2LQF9 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.0e-19
Identity = 88/209 (42.11%), Postives = 121/209 (57.89%), Query Frame = 0


Query: 40  LAFFSSLLFLLSIFIIFISIFKNLSFSSLFNSTIFWFFISNTLIFIIAADYGVFSLSQHK 99
           L+F++S LF + I+I  + IF NLS S+LF +T FWFF+SNTLI IIA DYG +S S  K
Sbjct: 29  LSFYAS-LFSIFIYISVLYIF-NLSPSALFYNTKFWFFLSNTLILIIAVDYGAYSSSNEK 88

Query: 100 SFHLYED------------FAPPNPKLTHFQLQSSSLAVFDEKKEI--------PHERLE 159
              LY++            F P   K+         +  F EK+E+        P   L+
Sbjct: 89  Q-DLYQEYVKRTQVKNVPSFVPQYQKIVKQSTPKQKVDSFQEKREVIVQEVQVFPERNLQ 148

Query: 160 IVVQRRRLDPP---LKTTPARTYRRRKSEKQTRIVSKENKKMMGKRSESVKYEAKELEEN 219
           +V++     P     +   A+TYRR KSE+  R+V  E+K ++ + SE+ K      EEN
Sbjct: 149 VVIKSDSEKPSEDLREKIKAKTYRRSKSEQAKRVVIDESKNIITRSSETEKN-----EEN 208

Query: 220 EFEKMTDEELNRRVEEFIQRFNRQMRLQT 226
           EF  M+DEELNRRVEEFIQRFNR++RLQ+
Sbjct: 209 EFSTMSDEELNRRVEEFIQRFNREIRLQS 229

[Close]

BLAST of Clc03G07160 vs. TAIR 10
Match: AT1G30190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G34610.1); Has 56 Blast hits to 56 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 5.7e-07
Identity = 79/268 (29.48%), Postives = 119/268 (44.40%), Query Frame = 0


Query: 23  YNIPNSQPYNKYRNDYTLAFFSSLLFLLSIFIIFISIFKNLSFSSLFNSTIFWFFISNTL 82
           Y I N +   K R  Y+ +  +  L + +  +IF  +F+ +S SS+F  T   FFISNTL
Sbjct: 7   YMIENPKFEPKKRRYYSSSMLTIFLPIFTYIMIF-HVFE-VSLSSVFKDTKVLFFISNTL 66

Query: 83  IFIIAADYGVFSLSQHKSFH------------LYEDFAP---------------PNPKLT 142
           I IIAADYG FS  + + F+              ++++P                NPK  
Sbjct: 67  ILIIAADYGSFSDKESQDFYGEYTVAAATMRNRADNYSPIPVLTYRENTKDGEIKNPKDV 126

Query: 143 HFQLQSSS-----------------LAVFDEKK---EIPHERLEIVVQRRRLDPPLKTT- 202
            F+                      + V  EKK   ++  E  + V ++         T 
Sbjct: 127 EFRNPEEEDEPMVKDIICVSPPEKIVRVVSEKKQRDDVAMEEYKPVTEQTLASEEACNTR 186

Query: 203 ----PARTYRRRKSEKQTR----IVSKENKKMMGKRSES---------VKYEAKELEENE 226
               P + Y R KS+K  R    + ++  K+    R +S          K+E  + E  E
Sbjct: 187 NHVNPNKPYGRSKSDKPRRKRLSVDTETTKRKSYGRKKSDCSRWMVIPEKWEYVKEESEE 246

[Close]

BLAST of Clc03G07160 vs. TAIR 10
Match: AT2G34610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits to 279 proteins in 74 species: Archae - 0; Bacteria - 7; Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other Eukaryotes - 190 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 9.0e-05
Identity = 74/281 (26.33%), Postives = 117/281 (41.64%), Query Frame = 0


Query: 26  PNSQPYNKYRNDYTLAFFSSLLFLLSIFIIFISIFKNLSFS--SLFNSTIFWFFISNTLI 85
           P  +PY K +  Y L  +SSLL ++     +I IF  L  S  S+FN T   F ISN LI
Sbjct: 12  PLFEPY-KPKKQYKL--YSSLLPIILSIFTYILIFHVLDVSPLSIFNDTKILFVISNALI 71

Query: 86  FIIAADYGVFSLSQHKSFH----------------------------------------- 145
            IIAADYG F+  ++  F+                                         
Sbjct: 72  IIIAADYGAFTDKENLDFYGEYTAAMRRDAQENPRPEKSVYGVSMAEETKNREKQEGPVG 131

Query: 146 ---LYEDFAP-PNPKLTHFQLQSSSL-----AVFDEKKEIPHERLEIVVQRRRLDPPLKT 205
              L + + P    K+T   +Q+ S         ++ + +  + + I+  +         
Sbjct: 132 ARDLQDQYLPNKKAKVTERIIQAVSKNQPRNKAIEKCEPVTEQNVHIIAAKEETCNASNL 191

Query: 206 TPARTYRRRKSEK-QTRIVSKENKKM-----------------------MGKRSE----- 225
             ++ Y R KS+K +  ++SKE ++                         GK+++     
Sbjct: 192 MNSKAYGRSKSDKARGSVISKERRRQEIKHRHKSYDRSQSDSSKWMVVHKGKKADEEMEE 251

The following BLAST results are available for this feature:

BLAST of Clc03G07160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877172.1	1.6e-88	85.15	uncharacterized protein LOC120069472 [Benincasa hispida]	[more]
KAE8653186.1	1.7e-82	79.66	hypothetical protein Csa_020019 [Cucumis sativus]	[more]
XP_023001467.1	7.3e-65	69.06	uncharacterized protein LOC111495593 [Cucurbita maxima]	[more]
XP_022927149.1	6.2e-64	69.06	uncharacterized protein LOC111434084 [Cucurbita moschata]	[more]
XP_023520225.1	2.0e-54	71.28	uncharacterized protein LOC111783530 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc03G07160 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc03G07160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGM0	3.5e-65	69.06	uncharacterized protein LOC111495593 OS=Cucurbita maxima OX=3661 GN=LOC111495593...	[more]
A0A6J1EH73	3.0e-64	69.06	uncharacterized protein LOC111434084 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]
A0A0A0M033	7.4e-63	66.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G435810 PE=4 SV=1	[more]
A0A2N9GT34	5.9e-20	44.62	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30393 PE=4 SV=1	[more]
A0A7N2LQF9	1.0e-19	42.11	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Clc03G07160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30190.1	5.7e-07	29.48	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G34610.1	9.0e-05	26.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 203..224 e-value: 1.9E-7 score: 30.5
None	No IPR available	PANTHER	PTHR35997:SF6	COTTON FIBER PROTEIN	coord: 136..226 coord: 31..119
None	No IPR available	PANTHER	PTHR35997	COTTON FIBER PROTEIN-RELATED	coord: 136..226
None	No IPR available	PANTHER	PTHR35997	COTTON FIBER PROTEIN-RELATED	coord: 31..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G07160.1	Clc03G07160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane