Clc03G06920 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTAAGGCTCATATATCCCATCGCACAAGAAATGGCCAACAATAACAACAACCACCACCACCTAACGCCTTCCGCCCAACCATCGCCGCCGCTAACCCCATTTTCAGCGATTGCGCCGCCGCCCTTCGGCCGTATTTCTAGACCCCAAATTCAAATTACTCTGCACACCATTTATGAAGACGAAACCGAAGCCAAAATCTGGCGTCGCCATTGTTACCATCGTAAACAAGCTTCTTCTTCCTCTTTCTCCTCGGCTCTCTCTTGTTTTCGTCCTCTTCGATCACTTAAATGTTCTTGA ATGAGTTTAAGGCTCATATATCCCATCGCACAAGAAATGGCCAACAATAACAACAACCACCACCACCTAACGCCTTCCGCCCAACCATCGCCGCCGCTAACCCCATTTTCAGCGATTGCGCCGCCGCCCTTCGGCCGTATTTCTAGACCCCAAATTCAAATTACTCTGCACACCATTTATGAAGACGAAACCGAAGCCAAAATCTGGCGTCGCCATTGTTACCATCGTAAACAAGCTTCTTCTTCCTCTTTCTCCTCGGCTCTCTCTTGTTTTCGTCCTCTTCGATCACTTAAATGTTCTTGA ATGAGTTTAAGGCTCATATATCCCATCGCACAAGAAATGGCCAACAATAACAACAACCACCACCACCTAACGCCTTCCGCCCAACCATCGCCGCCGCTAACCCCATTTTCAGCGATTGCGCCGCCGCCCTTCGGCCGTATTTCTAGACCCCAAATTCAAATTACTCTGCACACCATTTATGAAGACGAAACCGAAGCCAAAATCTGGCGTCGCCATTGTTACCATCGTAAACAAGCTTCTTCTTCCTCTTTCTCCTCGGCTCTCTCTTGTTTTCGTCCTCTTCGATCACTTAAATGTTCTTGA MSLRLIYPIAQEMANNNNNHHHLTPSAQPSPPLTPFSAIAPPPFGRISRPQIQITLHTIYEDETEAKIWRRHCYHRKQASSSSFSSALSCFRPLRSLKCS Homology
BLAST of Clc03G06920 vs. NCBI nr
Match: KAE8653296.1 (hypothetical protein Csa_023338 [Cucumis sativus]) HSP 1 Score: 125.9 bits (315), Expect = 1.9e-25 Identity = 74/100 (74.00%), Postives = 78/100 (78.00%), Query Frame = 0
BLAST of Clc03G06920 vs. NCBI nr
Match: KAG6583881.1 (hypothetical protein SDJN03_19813, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 115.9 bits (289), Expect = 2.0e-22 Identity = 68/109 (62.39%), Postives = 78/109 (71.56%), Query Frame = 0
BLAST of Clc03G06920 vs. NCBI nr
Match: KAA0054012.1 (hypothetical protein E6C27_scaffold318G00660 [Cucumis melo var. makuwa] >TYK20698.1 hypothetical protein E5676_scaffold480G00920 [Cucumis melo var. makuwa]) HSP 1 Score: 96.3 bits (238), Expect = 1.6e-16 Identity = 58/84 (69.05%), Postives = 62/84 (73.81%), Query Frame = 0
BLAST of Clc03G06920 vs. ExPASy TrEMBL
Match: A0A0A0M102 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534770 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 8.3e-19 Identity = 60/84 (71.43%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of Clc03G06920 vs. ExPASy TrEMBL
Match: A0A5D3DAX8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00920 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.8e-17 Identity = 58/84 (69.05%), Postives = 62/84 (73.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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