Clc03G06830 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G06830
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Remorin_C domain-containing protein
Location	ClcChr03: 6909868 .. 6911454 (-)
RNA-Seq Expression	Clc03G06830
Synteny	Clc03G06830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGAGAGAGAGAGAGAGAGATGGAGTGGTGTGTGGGTTTTAATGATAGAGAAGTTTGTATAAGTTTTGTTGTATTCAAGCCAATGGTATTGGTTGTAGATGATTTTATTGAAGCCTTGAAACAATTCTCCATCTCCACCAATAATCTTGGTTGTATTCAGAGCTCTGTTCTGAAGAGCATCCATGGAAATATGGTAAATACTATCCCTTTCTCCTATCATTCAGTCATATAACACATACATGTTGCTTTATCTTTTTCCATCTTAGATTTGATCATCACTATAATATTAATTAAGTTAGAAATTGGCTATCTACCTGCAAAACAAATGGAAAATTTTGGCACAGGTATGGTATTTGTCACAACGCTTCCAATACCTAAGCCACTGCAGGTCTTTTAGTTGTAGCAATTGCTTCAAGGATAAGAATAAAATTACTTTCTTCTAGTCATTTTGATGTATTTATAGAAAAAGTTTGGGCATCAAGATTAAGGTTTCAAACTCAGATTAGGTTGATTCTCGAGTCAAATGAGCCTCGTTCATTAAATGGAGACTCGGCCTTAGTCAAAGGCAAAGCAGTTAGTTTGAGCTTTTGTCCTAAACTCTCATATTCCCTAGACCCAAATGGGTTGCATGCCCCATCCATCAAATGAGGAGGCTCGGTCTCAACCGATCAGTTTGGACCTTCTCTTTTCATACCCAATTAAGTCTAAAGTGTGATCTTCTAACTCGAGTTTCATTCTTTTCTTGATTTTATAGTTTGGAAACTCACCTAAACTCAATTATGGTCTCTAAACCAAGTCTACTCATCACAATTATCATGTTTTTTTTTTTTTTTTTTTTGTCCCCACTAATTGGTAATGAATTTCTTTGAGATCTCCACTAAATTTTTTTAACCACTTCAGATCATATGGTGTGGACTTTGGGCAAAGAGATCAATTCAAAACACAGAATTATTATCTGAAGCACTTGTAAGTTACAATTTAACATTCACCAATTTCTAATCATTCATTTACATTTGTTGATAATGTTTTGACATTCTCTTCAGCTTCAAAACTTGACAAAAACATCAAACATGGCAACCTTAATCGATCTTAGCTTCTTCGAAGCTTATGGTGGAGAGTCCATGGATGGTTCTAATGTTGCAAAATTTACAAATAAAAGCATCATATCAATGATCTCAATAGCTGCAAAATGTGGTGATATAAACGATCTGTCCTACGCTTGCTTGGCAATTTTCAAGTCTCGATTTCGAAAGATTGAAGGCATAAGTTCCGGAATTTGCTTGAAATCTCAAAATAGGCCAACTGTTGTTTCACTCTATGTTTGGAATTCTCCCTTTTATTGTTACTCATGGATCTTGAATTCGGATCATTTGAACTCAATGTTACCTTATCTTGATCGTTTTTCCCTTTGTATTAAATATGATATATATCAAGTGGTGAATGTAAGCGATGCAAATGTGACTAACTTTAAGGATTTGGATGTGAAATAAAGAAAAGAAAGGGAGGGGGAAAAGTGCAAATCTTGTGATGTGAAATAAAGAAAAGAAAGATACTAGAATAGATTATTATTATTATTATTATTAT

mRNA sequence

AGAGAGAGAGAGAGAGAGAGAGATGGAGTGGTGTGTGGGTTTTAATGATAGAGAAGTTTGTATAAGTTTTGTTGTATTCAAGCCAATGGTATTGGTTGTAGATGATTTTATTGAAGCCTTGAAACAATTCTCCATCTCCACCAATAATCTTGGTTGTATTCAGAGCTCTGTTCTGAAGAGCATCCATGGAAATATGAAATTGGCTATCTACCTGCAAAACAAATGGAAAATTTTGGCACAGATCATATGGTGTGGACTTTGGGCAAAGAGATCAATTCAAAACACAGAATTATTATCTGAAGCACTTCTTCAAAACTTGACAAAAACATCAAACATGGCAACCTTAATCGATCTTAGCTTCTTCGAAGCTTATGGTGGAGAGTCCATGGATGGTTCTAATGTTGCAAAATTTACAAATAAAAGCATCATATCAATGATCTCAATAGCTGCAAAATGTGGTGATATAAACGATCTGTCCTACGCTTGCTTGGCAATTTTCAAGTCTCGATTTCGAAAGATTGAAGGCATAAGTTCCGGAATTTGCTTGAAATCTCAAAATAGGCCAACTGTTGTTTCACTCTATGTTTGGAATTCTCCCTTTTATTGTTACTCATGGATCTTGAATTCGGATCATTTGAACTCAATGTTACCTTATCTTGATCGTTTTTCCCTTTGTATTAAATATGATATATATCAAGTGGTGAATGTAAGCGATGCAAATGTGACTAACTTTAAGGATTTGGATGTGAAATAAAGAAAAGAAAGGGAGGGGGAAAAGTGCAAATCTTGTGATGTGAAATAAAGAAAAGAAAGATACTAGAATAGATTATTATTATTATTATTATTAT

Coding sequence (CDS)

ATGGAGTGGTGTGTGGGTTTTAATGATAGAGAAGTTTGTATAAGTTTTGTTGTATTCAAGCCAATGGTATTGGTTGTAGATGATTTTATTGAAGCCTTGAAACAATTCTCCATCTCCACCAATAATCTTGGTTGTATTCAGAGCTCTGTTCTGAAGAGCATCCATGGAAATATGAAATTGGCTATCTACCTGCAAAACAAATGGAAAATTTTGGCACAGATCATATGGTGTGGACTTTGGGCAAAGAGATCAATTCAAAACACAGAATTATTATCTGAAGCACTTCTTCAAAACTTGACAAAAACATCAAACATGGCAACCTTAATCGATCTTAGCTTCTTCGAAGCTTATGGTGGAGAGTCCATGGATGGTTCTAATGTTGCAAAATTTACAAATAAAAGCATCATATCAATGATCTCAATAGCTGCAAAATGTGGTGATATAAACGATCTGTCCTACGCTTGCTTGGCAATTTTCAAGTCTCGATTTCGAAAGATTGAAGGCATAAGTTCCGGAATTTGCTTGAAATCTCAAAATAGGCCAACTGTTGTTTCACTCTATGTTTGGAATTCTCCCTTTTATTGTTACTCATGGATCTTGAATTCGGATCATTTGAACTCAATGTTACCTTATCTTGATCGTTTTTCCCTTTGTATTAAATATGATATATATCAAGTGGTGAATGTAAGCGATGCAAATGTGACTAACTTTAAGGATTTGGATGTGAAATAA

Protein sequence

MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTKTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLDVK

Homology

[Close]

BLAST of Clc03G06830 vs. NCBI nr
Match: XP_038895125.1 (uncharacterized protein LOC120083436 [Benincasa hispida])

HSP 1 Score: 418.7 bits (1075), Expect = 3.4e-113
Identity = 210/243 (86.42%), Postives = 217/243 (89.30%), Query Frame = 0


Query: 1   MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKL 60
           MEWCVGFND+E  ISFVVFKPMVLV+DDF+EALKQFS STNNLGCIQSSVLKSIHGNM  
Sbjct: 1   MEWCVGFNDKEAYISFVVFKPMVLVIDDFVEALKQFSFSTNNLGCIQSSVLKSIHGNM-- 60

Query: 61  AIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTKTSNMATLIDLSFFEAYGGE 120
                        IIWCG+WAKRSIQNT+LLSE LLQ L KTSNMATLIDLSFFEAYGGE
Sbjct: 61  -------------IIWCGIWAKRSIQNTQLLSETLLQILRKTSNMATLIDLSFFEAYGGE 120

Query: 121 SMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNR 180
           SMDGSNV KFT+KSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEG+SSGICLKSQN 
Sbjct: 121 SMDGSNVIKFTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVSSGICLKSQNG 180

Query: 181 PTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDL 240
            TVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSD NV NFKDL
Sbjct: 181 ATVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDENVPNFKDL 228

Query: 241 DVK 244
           DVK
Sbjct: 241 DVK 228

[Close]

BLAST of Clc03G06830 vs. NCBI nr
Match: XP_008444703.1 (PREDICTED: uncharacterized protein LOC103487959 [Cucumis melo])

HSP 1 Score: 407.1 bits (1045), Expect = 1.0e-109
Identity = 203/242 (83.88%), Postives = 218/242 (90.08%), Query Frame = 0


Query: 1   MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKL 60
           MEWCVGFND+E+ +SFVVFKPMVLVVDDF+EALKQFS STNNLGCIQ+ VLKSIHGNM  
Sbjct: 1   MEWCVGFNDKEIYVSFVVFKPMVLVVDDFVEALKQFSFSTNNLGCIQNCVLKSIHGNM-- 60

Query: 61  AIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQN-LTKTSNMATLIDLSFFEAYGG 120
                        IIWCG+WAKRSIQ+ +LLSE LLQ  ++KTSNMATL+DLSFFEAYGG
Sbjct: 61  -------------IIWCGIWAKRSIQSPQLLSERLLQTVISKTSNMATLLDLSFFEAYGG 120

Query: 121 ESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQN 180
           ESMDGS VAKFT++SIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGI+SGICLKSQN
Sbjct: 121 ESMDGSCVAKFTSRSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGINSGICLKSQN 180

Query: 181 RPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKD 240
           RPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANV+ FKD
Sbjct: 181 RPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVSKFKD 227

Query: 241 LD 242
           LD
Sbjct: 241 LD 227

[Close]

BLAST of Clc03G06830 vs. NCBI nr
Match: XP_011648519.1 (uncharacterized protein LOC105434510 isoform X2 [Cucumis sativus] >KGN65879.1 hypothetical protein Csa_023258 [Cucumis sativus])

HSP 1 Score: 402.5 bits (1033), Expect = 2.6e-108
Identity = 199/242 (82.23%), Postives = 215/242 (88.84%), Query Frame = 0


Query: 1   MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKL 60
           MEWCVGFND+E+ +SFVVFKPMVLVVDDF+EALKQFS STNNLGCIQ+ VLKSIHGNM  
Sbjct: 1   MEWCVGFNDKEIYVSFVVFKPMVLVVDDFVEALKQFSFSTNNLGCIQNCVLKSIHGNM-- 60

Query: 61  AIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQN-LTKTSNMATLIDLSFFEAYGG 120
                        IIWCG+W K+ IQN +LLSE LLQ  ++KTSNMATL+DLSFFEAYGG
Sbjct: 61  -------------IIWCGIWTKKLIQNPQLLSETLLQTMISKTSNMATLLDLSFFEAYGG 120

Query: 121 ESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQN 180
           ESMDGS VAKFT+KSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEG++SGICLKSQN
Sbjct: 121 ESMDGSCVAKFTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVNSGICLKSQN 180

Query: 181 RPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKD 240
           RPTVVSL+VWNSPFYCYSWILNSDHLNSMLPYLD FSLCIKYDIYQVVN+SDANV NFKD
Sbjct: 181 RPTVVSLHVWNSPFYCYSWILNSDHLNSMLPYLDHFSLCIKYDIYQVVNISDANVPNFKD 227

Query: 241 LD 242
           LD
Sbjct: 241 LD 227

[Close]

BLAST of Clc03G06830 vs. NCBI nr
Match: XP_031738897.1 (uncharacterized protein LOC105434510 isoform X1 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 6.5e-104
Identity = 197/270 (72.96%), Postives = 214/270 (79.26%), Query Frame = 0


Query: 1   MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKL 60
           MEWCVGFND+E+ +SFVVFKPMVLVVDDF+EALKQFS STNNLGCIQ+ VLKSIHGNM  
Sbjct: 1   MEWCVGFNDKEIYVSFVVFKPMVLVVDDFVEALKQFSFSTNNLGCIQNCVLKSIHGNM-- 60

Query: 61  AIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQ----------------------- 120
                        IIWCG+W K+ IQN +LLSE L+                        
Sbjct: 61  -------------IIWCGIWTKKLIQNPQLLSETLVSYTLTFLIFLITHLRLLLYINFLH 120

Query: 121 ------NLTKTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDL 180
                  ++KTSNMATL+DLSFFEAYGGESMDGS VAKFT+KSIISMISIAAKCGDINDL
Sbjct: 121 FVQLQTMISKTSNMATLLDLSFFEAYGGESMDGSCVAKFTSKSIISMISIAAKCGDINDL 180

Query: 181 SYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPY 240
           SYACLAIFKSRFRKIEG++SGICLKSQNRPTVVSL+VWNSPFYCYSWILNSDHLNSMLPY
Sbjct: 181 SYACLAIFKSRFRKIEGVNSGICLKSQNRPTVVSLHVWNSPFYCYSWILNSDHLNSMLPY 240

Query: 241 LDRFSLCIKYDIYQVVNVSDANVTNFKDLD 242
           LD FSLCIKYDIYQVVN+SDANV NFKDLD
Sbjct: 241 LDHFSLCIKYDIYQVVNISDANVPNFKDLD 255

[Close]

BLAST of Clc03G06830 vs. NCBI nr
Match: XP_023001460.1 (uncharacterized protein LOC111495588 isoform X1 [Cucurbita maxima])

HSP 1 Score: 377.1 bits (967), Expect = 1.1e-100
Identity = 186/241 (77.18%), Postives = 207/241 (85.89%), Query Frame = 0


Query: 2   EWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLA 61
           EWCVGFNDREV I FVVFKP+V VVD F+EALKQFS ST NLGCIQSSVLKSIHGNM   
Sbjct: 3   EWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNM--- 62

Query: 62  IYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTKTSNMATLIDLSFFEAYGGES 121
                       IIWCG+WAKRSI+NTELLSEA+L+NLTK S MAT+ID+SFFEAYGG+S
Sbjct: 63  ------------IIWCGIWAKRSIENTELLSEAILKNLTKVSGMATIIDISFFEAYGGDS 122

Query: 122 MDGSNVAKFTNKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGISSGICLKSQNR 181
           MDGS VA+F+   +ISMIS+AAK  GD+NDLSYACLAIFKSRF+KIEG+ SGICLKSQNR
Sbjct: 123 MDGSCVARFSKNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGICLKSQNR 182

Query: 182 PTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDL 241
            TV+SLYVWNSPFYCYSWILNSDHLNSM+PYLDRFSLCIKYD++QVVNV DANV +F DL
Sbjct: 183 STVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQVVNVMDANVADFLDL 228

[Close]

BLAST of Clc03G06830 vs. ExPASy TrEMBL
Match: A0A1S3BAH1 (uncharacterized protein LOC103487959 OS=Cucumis melo OX=3656 GN=LOC103487959 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 5.0e-110
Identity = 203/242 (83.88%), Postives = 218/242 (90.08%), Query Frame = 0


Query: 1   MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKL 60
           MEWCVGFND+E+ +SFVVFKPMVLVVDDF+EALKQFS STNNLGCIQ+ VLKSIHGNM  
Sbjct: 1   MEWCVGFNDKEIYVSFVVFKPMVLVVDDFVEALKQFSFSTNNLGCIQNCVLKSIHGNM-- 60

Query: 61  AIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQN-LTKTSNMATLIDLSFFEAYGG 120
                        IIWCG+WAKRSIQ+ +LLSE LLQ  ++KTSNMATL+DLSFFEAYGG
Sbjct: 61  -------------IIWCGIWAKRSIQSPQLLSERLLQTVISKTSNMATLLDLSFFEAYGG 120

Query: 121 ESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQN 180
           ESMDGS VAKFT++SIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGI+SGICLKSQN
Sbjct: 121 ESMDGSCVAKFTSRSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGINSGICLKSQN 180

Query: 181 RPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKD 240
           RPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANV+ FKD
Sbjct: 181 RPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVSKFKD 227

Query: 241 LD 242
           LD
Sbjct: 241 LD 227

[Close]

BLAST of Clc03G06830 vs. ExPASy TrEMBL
Match: A0A0A0LXV2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G536320 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 1.2e-108
Identity = 199/242 (82.23%), Postives = 215/242 (88.84%), Query Frame = 0


Query: 1   MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKL 60
           MEWCVGFND+E+ +SFVVFKPMVLVVDDF+EALKQFS STNNLGCIQ+ VLKSIHGNM  
Sbjct: 1   MEWCVGFNDKEIYVSFVVFKPMVLVVDDFVEALKQFSFSTNNLGCIQNCVLKSIHGNM-- 60

Query: 61  AIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQN-LTKTSNMATLIDLSFFEAYGG 120
                        IIWCG+W K+ IQN +LLSE LLQ  ++KTSNMATL+DLSFFEAYGG
Sbjct: 61  -------------IIWCGIWTKKLIQNPQLLSETLLQTMISKTSNMATLLDLSFFEAYGG 120

Query: 121 ESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQN 180
           ESMDGS VAKFT+KSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEG++SGICLKSQN
Sbjct: 121 ESMDGSCVAKFTSKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGVNSGICLKSQN 180

Query: 181 RPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKD 240
           RPTVVSL+VWNSPFYCYSWILNSDHLNSMLPYLD FSLCIKYDIYQVVN+SDANV NFKD
Sbjct: 181 RPTVVSLHVWNSPFYCYSWILNSDHLNSMLPYLDHFSLCIKYDIYQVVNISDANVPNFKD 227

Query: 241 LD 242
           LD
Sbjct: 241 LD 227

[Close]

BLAST of Clc03G06830 vs. ExPASy TrEMBL
Match: A0A6J1KL93 (uncharacterized protein LOC111495588 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495588 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.6e-101
Identity = 186/241 (77.18%), Postives = 207/241 (85.89%), Query Frame = 0


Query: 2   EWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLA 61
           EWCVGFNDREV I FVVFKP+V VVD F+EALKQFS ST NLGCIQSSVLKSIHGNM   
Sbjct: 3   EWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNM--- 62

Query: 62  IYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTKTSNMATLIDLSFFEAYGGES 121
                       IIWCG+WAKRSI+NTELLSEA+L+NLTK S MAT+ID+SFFEAYGG+S
Sbjct: 63  ------------IIWCGIWAKRSIENTELLSEAILKNLTKVSGMATIIDISFFEAYGGDS 122

Query: 122 MDGSNVAKFTNKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGISSGICLKSQNR 181
           MDGS VA+F+   +ISMIS+AAK  GD+NDLSYACLAIFKSRF+KIEG+ SGICLKSQNR
Sbjct: 123 MDGSCVARFSKNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGICLKSQNR 182

Query: 182 PTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDL 241
            TV+SLYVWNSPFYCYSWILNSDHLNSM+PYLDRFSLCIKYD++QVVNV DANV +F DL
Sbjct: 183 STVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQVVNVMDANVADFLDL 228

[Close]

BLAST of Clc03G06830 vs. ExPASy TrEMBL
Match: A0A6J1EGH4 (uncharacterized protein LOC111434118 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434118 PE=4 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 1.2e-100
Identity = 185/240 (77.08%), Postives = 207/240 (86.25%), Query Frame = 0


Query: 2   EWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLA 61
           EWCVGFNDREV I FVVFKP+V VVD F+EALKQFS ST NLGCIQSSVLKSIHGNM   
Sbjct: 3   EWCVGFNDREVSICFVVFKPLVFVVDHFVEALKQFSFSTTNLGCIQSSVLKSIHGNM--- 62

Query: 62  IYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTKTSNMATLIDLSFFEAYGGES 121
                       IIWCG+WAKRSI+NTELLSEA+L+NLTK S+MAT+ID+SFFEAYGG+S
Sbjct: 63  ------------IIWCGIWAKRSIENTELLSEAILKNLTKVSDMATIIDISFFEAYGGDS 122

Query: 122 MDGSNVAKFTNKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGISSGICLKSQNR 181
           MDGS VAKF+   +ISMIS+AAK  GD+NDLSYACLAIFKSRF+KIEG+ SG+CLKSQNR
Sbjct: 123 MDGSCVAKFSRNRVISMISVAAKSGGDMNDLSYACLAIFKSRFQKIEGVISGVCLKSQNR 182

Query: 182 PTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDL 241
            TV+SLYVWNSPFYCYSWILNSDHLNSM+PYLDRFSLCIKYD++QVVNV DANV +F DL
Sbjct: 183 STVMSLYVWNSPFYCYSWILNSDHLNSMMPYLDRFSLCIKYDVFQVVNVMDANVADFLDL 227

[Close]

BLAST of Clc03G06830 vs. ExPASy TrEMBL
Match: A0A6J1CGA3 (uncharacterized protein LOC111010955 OS=Momordica charantia OX=3673 GN=LOC111010955 PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 3.5e-87
Identity = 169/237 (71.31%), Postives = 195/237 (82.28%), Query Frame = 0


Query: 1   MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKL 60
           ME  V FNDRE+ ISF+VFKPMV+VVDDFIEALK+FS  T NLGCIQSSVLKSIHGNM  
Sbjct: 15  MECSVPFNDRELSISFLVFKPMVMVVDDFIEALKEFSFFTKNLGCIQSSVLKSIHGNM-- 74

Query: 61  AIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTKTSNMATLIDLSFFEAYGGE 120
                        IIWCG WAKRSIQNTE L+E LLQNLT  S+MA+L DLSFF+AY G+
Sbjct: 75  -------------IIWCGTWAKRSIQNTESLTEELLQNLTNMSDMASLTDLSFFDAYAGD 134

Query: 121 SMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNR 180
           SMDGS+VAKF++ S ISMIS AAK GDI+DLSYACLAIFKSRFRK+EG+ SGICLK ++R
Sbjct: 135 SMDGSSVAKFSSNSTISMISAAAKSGDIDDLSYACLAIFKSRFRKMEGVKSGICLKCESR 194

Query: 181 PTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRF-SLCIKYDIYQVVNVSDANVTN 237
           P+VVSLYVWNS F CYSWILNSDH+ SMLPYLDRF  LC+KYD++QVV+V+ ++ TN
Sbjct: 195 PSVVSLYVWNSLFNCYSWILNSDHMKSMLPYLDRFPQLCVKYDMFQVVDVTVSDHTN 236

The following BLAST results are available for this feature:

BLAST of Clc03G06830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895125.1	3.4e-113	86.42	uncharacterized protein LOC120083436 [Benincasa hispida]	[more]
XP_008444703.1	1.0e-109	83.88	PREDICTED: uncharacterized protein LOC103487959 [Cucumis melo]	[more]
XP_011648519.1	2.6e-108	82.23	uncharacterized protein LOC105434510 isoform X2 [Cucumis sativus] >KGN65879.1 hy...	[more]
XP_031738897.1	6.5e-104	72.96	uncharacterized protein LOC105434510 isoform X1 [Cucumis sativus]	[more]
XP_023001460.1	1.1e-100	77.18	uncharacterized protein LOC111495588 isoform X1 [Cucurbita maxima]	[more]

BLAST of Clc03G06830 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc03G06830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BAH1	5.0e-110	83.88	uncharacterized protein LOC103487959 OS=Cucumis melo OX=3656 GN=LOC103487959 PE=...	[more]
A0A0A0LXV2	1.2e-108	82.23	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G536320 PE=4 SV=1	[more]
A0A6J1KL93	5.6e-101	77.18	uncharacterized protein LOC111495588 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EGH4	1.2e-100	77.08	uncharacterized protein LOC111434118 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1CGA3	3.5e-87	71.31	uncharacterized protein LOC111010955 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]

BLAST of Clc03G06830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38226	FAMILY NOT NAMED	coord: 1..239
None	No IPR available	PANTHER	PTHR38226:SF3	SUBFAMILY NOT NAMED	coord: 1..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G06830.2	Clc03G06830.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050896	response to stimulus