Clc03G06300 (gene) Watermelon (cordophanus) v2

Overview
NameClc03G06300
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationClcChr03: 6010771 .. 6012786 (-)
RNA-Seq ExpressionClc03G06300
SyntenyClc03G06300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCAGAAGCTTTTCTCCAAAGTCTTAACACGCTATGCTATAGCTGGCCGATCTTACCACACGAATCGGTTGAAAAAGGCGACTCTATATGCGAAAATTAGTCCACTGGGCGATCCTAGCATCAGCGTGGAGCCGGAGCTCGACGGTTGGGTTCAGGAGGGGAAGAAGGTACGAGTCGCGGAGCTTCAGAGAATCATTCGCGACCTTCGGAAGCGCAAGCGTTTTACCCAAGCTCTTGAGGTTTGAATTCCTCTTTCTCGAAATGTGCTTTGTTTTGGTTTGATTACTTAGATGTGGAGGAAGTGAACTGTATAAAAATGATGGATCGTATGAGAACTTTGTGCCTTTTAGACGTTAAATGTGCGTGGCTAATCACTAACTTCAAATTATCGATAGATTTAGCTTGGAGAAACGGAAGGCACGTAGGTTTTTTATGCTAAGAAGTCAGAAGTTCCCTTCCTTACGTTCTTTGATTAAGTGAATTTGTTTGAGTAACTTCATTTGTTGACAGAAATGGACTTTTCAGAGATGACATTATGTCGTTTCTCCCCTATATAATTTAGAACATGATTTCACTTGCAAGGAATTTAACTCTTTGTAGATAATGTTTGAATGGCTGAAGCATTGTATGAGCTAGAAATATGTGGATATGAGCAGGCTTTTGGTGGAGTTGTTTGTAATTGAAGATGAGTATAAGTGCAGGTGTCCGAATGGATGAAGAAAAGTGGTGTCTGCATATTTTCACCCACCGAGCATGCAGTGCAATTGGATCTGATTGGCCGAGTAAGAGGATATCTTTCTGCTGAAAACTATTTCAATCAGTTGAAGGAGCAAGACCAGACTAGTAATACATATGGTGCTCTCCTGAATTGCTACGTTCGGCAGCGGCAAGTGGAAAAATCCCTCTCCCATTTGCAAAAAATGAAAGAGATGGGTTTTGCAACTTCACAGCTCACTTACAATGACATTATGTGTTTGTACACAAATGTTGGCCAGCATGACAAGGTTCCTGAAGTGCTAGCAGAGATGAAGGAGAAGAATGTTTCTCCTGACAACTTCAGCTACAGAATCTGCATCAACTCGTATGGTGTGAGGCATGATCTTGAGGGGATGGAGAATGTATTGAAGGAGATGGAATCTCAACCTCATATTATCATGGACTGGAACACTTATGCAGTAGTTGCAAACTTCTTTATAAAAGCGGGTCTTACTGATAAGGCGGTTAATGCCTTGAGAAAGTCAGAAGAGAGACTGAAGAGTAAGGATAGAATTGGCCATAACCATCTGATATCGCTTTATGCGACCTTAGGGAACAAAGAAAAGGTGTTGAAATTGTGGAATCTGGATAAAACTGCTACTACGAGATTCATCAATAGGGACTACATCACAATGCTTGAATCTCTGGTGAGACTAGGTGGACTTGAAGAAGCTGAAGAAGTGCTGAAAGAGTGGGAATCATCTGGGAATTGCTATGATTTTCGAGTTCCTAACACTGTCATTGTTGGATATATTGACAAGGGAATGTGTGAGAGAGCTGAAACACTGCTTCAAGACTTGATGGAGAAAGAAAAGGCTACCACACCAAACAGTTGGGGTGCTGTGGCTGTTCAGTATCTGGACCGGGGTGAGACCGAAAATGCTTTAGAGTGTATGAAGGCAGCCCTTTCTCTAAACATGGATAAGGGATGGAAGCCTAATCTTCGGGTGATCACAGCTCTATTGAATTGGCTTGGTGATAAGGGAATTATAGAAGAAGTGGAAGCTTTTGTAGGAGCATTGAGGTCTGTCATCCCGGTGAACAGAGAGATGTATCATGCCTTGATAAAGGTTCATATAAGAGGTGGTAAAGAAGTAAATGAGCTGTTAGATCAAATGAAGTCTGATAAAATAGATGAAGATGAAGAAACAAAGAAAATTCTTGCCACTTGGGAAGAAACAACTGAAGGTAAGAGTATTGACTGATTGTTTTCTTATTGTATCTCATTATTGATGGTGTCCATCTGCCAAATCTTG

mRNA sequence

ATGGATCAGAAGCTTTTCTCCAAAGTCTTAACACGCTATGCTATAGCTGGCCGATCTTACCACACGAATCGGTTGAAAAAGGCGACTCTATATGCGAAAATTAGTCCACTGGGCGATCCTAGCATCAGCGTGGAGCCGGAGCTCGACGGTTGGGTTCAGGAGGGGAAGAAGGTACGAGTCGCGGAGCTTCAGAGAATCATTCGCGACCTTCGGAAGCGCAAGCGTTTTACCCAAGCTCTTGAGGTGTCCGAATGGATGAAGAAAAGTGGTGTCTGCATATTTTCACCCACCGAGCATGCAGTGCAATTGGATCTGATTGGCCGAGTAAGAGGATATCTTTCTGCTGAAAACTATTTCAATCAGTTGAAGGAGCAAGACCAGACTAGTAATACATATGGTGCTCTCCTGAATTGCTACGTTCGGCAGCGGCAAGTGGAAAAATCCCTCTCCCATTTGCAAAAAATGAAAGAGATGGGTTTTGCAACTTCACAGCTCACTTACAATGACATTATGTGTTTGTACACAAATGTTGGCCAGCATGACAAGGTTCCTGAAGTGCTAGCAGAGATGAAGGAGAAGAATGTTTCTCCTGACAACTTCAGCTACAGAATCTGCATCAACTCGTATGGTGTGAGGCATGATCTTGAGGGGATGGAGAATGTATTGAAGGAGATGGAATCTCAACCTCATATTATCATGGACTGGAACACTTATGCAGTAGTTGCAAACTTCTTTATAAAAGCGGGTCTTACTGATAAGGCGGTTAATGCCTTGAGAAAGTCAGAAGAGAGACTGAAGAGTAAGGATAGAATTGGCCATAACCATCTGATATCGCTTTATGCGACCTTAGGGAACAAAGAAAAGGTGTTGAAATTGTGGAATCTGGATAAAACTGCTACTACGAGATTCATCAATAGGGACTACATCACAATGCTTGAATCTCTGGTGAGACTAGGTGGACTTGAAGAAGCTGAAGAAGTGCTGAAAGAGTGGGAATCATCTGGGAATTGCTATGATTTTCGAGTTCCTAACACTGTCATTGTTGGATATATTGACAAGGGAATGTGTGAGAGAGCTGAAACACTGCTTCAAGACTTGATGGAGAAAGAAAAGGCTACCACACCAAACAGTTGGGGTGCTGTGGCTGTTCAGTATCTGGACCGGGGTGAGACCGAAAATGCTTTAGAGTGTATGAAGGCAGCCCTTTCTCTAAACATGGATAAGGGATGGAAGCCTAATCTTCGGGTGATCACAGCTCTATTGAATTGGCTTGGTGATAAGGGAATTATAGAAGAAGTGGAAGCTTTTGTAGGAGCATTGAGGTCTGTCATCCCGGTGAACAGAGAGATGTATCATGCCTTGATAAAGGTTCATATAAGAGGTGGTAAAGAAGTAAATGAGCTGTTAGATCAAATGAAGTCTGATAAAATAGATGAAGATGAAGAAACAAAGAAAATTCTTGCCACTTGGGAAGAAACAACTGAAGGTAAGAGTATTGACTGATTGTTTTCTTATTGTATCTCATTATTGATGGTGTCCATCTGCCAAATCTTG

Coding sequence (CDS)

ATGGATCAGAAGCTTTTCTCCAAAGTCTTAACACGCTATGCTATAGCTGGCCGATCTTACCACACGAATCGGTTGAAAAAGGCGACTCTATATGCGAAAATTAGTCCACTGGGCGATCCTAGCATCAGCGTGGAGCCGGAGCTCGACGGTTGGGTTCAGGAGGGGAAGAAGGTACGAGTCGCGGAGCTTCAGAGAATCATTCGCGACCTTCGGAAGCGCAAGCGTTTTACCCAAGCTCTTGAGGTGTCCGAATGGATGAAGAAAAGTGGTGTCTGCATATTTTCACCCACCGAGCATGCAGTGCAATTGGATCTGATTGGCCGAGTAAGAGGATATCTTTCTGCTGAAAACTATTTCAATCAGTTGAAGGAGCAAGACCAGACTAGTAATACATATGGTGCTCTCCTGAATTGCTACGTTCGGCAGCGGCAAGTGGAAAAATCCCTCTCCCATTTGCAAAAAATGAAAGAGATGGGTTTTGCAACTTCACAGCTCACTTACAATGACATTATGTGTTTGTACACAAATGTTGGCCAGCATGACAAGGTTCCTGAAGTGCTAGCAGAGATGAAGGAGAAGAATGTTTCTCCTGACAACTTCAGCTACAGAATCTGCATCAACTCGTATGGTGTGAGGCATGATCTTGAGGGGATGGAGAATGTATTGAAGGAGATGGAATCTCAACCTCATATTATCATGGACTGGAACACTTATGCAGTAGTTGCAAACTTCTTTATAAAAGCGGGTCTTACTGATAAGGCGGTTAATGCCTTGAGAAAGTCAGAAGAGAGACTGAAGAGTAAGGATAGAATTGGCCATAACCATCTGATATCGCTTTATGCGACCTTAGGGAACAAAGAAAAGGTGTTGAAATTGTGGAATCTGGATAAAACTGCTACTACGAGATTCATCAATAGGGACTACATCACAATGCTTGAATCTCTGGTGAGACTAGGTGGACTTGAAGAAGCTGAAGAAGTGCTGAAAGAGTGGGAATCATCTGGGAATTGCTATGATTTTCGAGTTCCTAACACTGTCATTGTTGGATATATTGACAAGGGAATGTGTGAGAGAGCTGAAACACTGCTTCAAGACTTGATGGAGAAAGAAAAGGCTACCACACCAAACAGTTGGGGTGCTGTGGCTGTTCAGTATCTGGACCGGGGTGAGACCGAAAATGCTTTAGAGTGTATGAAGGCAGCCCTTTCTCTAAACATGGATAAGGGATGGAAGCCTAATCTTCGGGTGATCACAGCTCTATTGAATTGGCTTGGTGATAAGGGAATTATAGAAGAAGTGGAAGCTTTTGTAGGAGCATTGAGGTCTGTCATCCCGGTGAACAGAGAGATGTATCATGCCTTGATAAAGGTTCATATAAGAGGTGGTAAAGAAGTAAATGAGCTGTTAGATCAAATGAAGTCTGATAAAATAGATGAAGATGAAGAAACAAAGAAAATTCTTGCCACTTGGGAAGAAACAACTGAAGGTAAGAGTATTGACTGA

Protein sequence

MDQKLFSKVLTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIRDLRKRKRFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFNQLKEQDQTSNTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQHDKVPEVLAEMKEKNVSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAVVANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTATTRFINRDYITMLESLVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAETLLQDLMEKEKATTPNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITALLNWLGDKGIIEEVEAFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDEDEETKKILATWEETTEGKSID
Homology
BLAST of Clc03G06300 vs. NCBI nr
Match: XP_038893646.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial [Benincasa hispida] >XP_038893647.1 pentatricopeptide repeat-containing protein At4g21705, mitochondrial [Benincasa hispida])

HSP 1 Score: 939.1 bits (2426), Expect = 1.6e-269
Identity = 465/496 (93.75%), Postives = 481/496 (96.98%), Query Frame = 0

Query: 1   MDQKLFSKVLTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MDQKL SKVLTRYAIA RSYHTNRLKKATLYAKISPLGDPSISVEPELD WVQEGKKVRV
Sbjct: 1   MDQKLLSKVLTRYAIASRSYHTNRLKKATLYAKISPLGDPSISVEPELDCWVQEGKKVRV 60

Query: 61  AELQRIIRDLRKRKRFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFN 120
           AELQRII DLRKRKRFTQALEVSEWMKK+GVCIFSPTEHAVQLDLIGRVRGYLSAE+YF+
Sbjct: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKNGVCIFSPTEHAVQLDLIGRVRGYLSAESYFS 120

Query: 121 QLKEQDQTSNTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQH 180
           QL EQDQT  TYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQH
Sbjct: 121 QLNEQDQTGKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQH 180

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAV 240
           DKVPEVLAEMKEKNVSPDNFSYRICINSYG RHDLEGMENVLKEMESQPHI+MDWNTYAV
Sbjct: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARHDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTAT 300
           VANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVL+LWNLDKT T
Sbjct: 241 VANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTGT 300

Query: 301 TRFINRDYITMLESLVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TRFINRDYITMLESLVRLG LEEAE+VLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 TLLQDLMEKEKATTPNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITAL 420
           TLL+DLMEKEKATTPNSWGAVAV+YLD+GE + A+ECMKAALSLNMDKGWKPNLRVIT++
Sbjct: 361 TLLEDLMEKEKATTPNSWGAVAVKYLDQGENKKAVECMKAALSLNMDKGWKPNLRVITSV 420

Query: 421 LNWLGDKGIIEEVEAFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDED 480
           LNWLGDKGIIEEVEAFV ALRSVIPVNREMYHALIKV+IR GKEVNELL+QMKSDKIDED
Sbjct: 421 LNWLGDKGIIEEVEAFVSALRSVIPVNREMYHALIKVYIRAGKEVNELLNQMKSDKIDED 480

Query: 481 EETKKILATWEETTEG 497
           EET+KIL TWEETTEG
Sbjct: 481 EETQKILGTWEETTEG 496

BLAST of Clc03G06300 vs. NCBI nr
Match: XP_022994385.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 902.1 bits (2330), Expect = 2.1e-258
Identity = 443/498 (88.96%), Postives = 472/498 (94.78%), Query Frame = 0

Query: 1   MDQKLFSKVLTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MDQ  FSK LTRYA+A R YHTNRLKKATLYAKISPLGDP++SVEPELDGWV+EGKKVR+
Sbjct: 1   MDQ-FFSKALTRYALADRFYHTNRLKKATLYAKISPLGDPNVSVEPELDGWVKEGKKVRI 60

Query: 61  AELQRIIRDLRKRKRFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFN 120
           AELQRII DLRKRKRFTQALEVSEWMKK+GVCIFSP+EHAVQLDLIGRVRGYLSAE+YFN
Sbjct: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120

Query: 121 QLKEQDQTSNTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQH 180
           QLKEQDQT  TYGALLNCYVRQRQVEKSLSHLQKMKEMGFATS+LTYND+MCLYTNVGQH
Sbjct: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAV 240
           DKVPEVLAEMKEKNVSPDNFSYRICINSYG R DLEGMENVLKEMESQPHI+MDWNTYAV
Sbjct: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTAT 300
           VANFFIKA L DKAV+AL+K+EERLKSKDRIGHNHLISLY TLGNKEKVL+LWNLDKT T
Sbjct: 241 VANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYTTLGNKEKVLRLWNLDKTDT 300

Query: 301 TRFINRDYITMLESLVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TRFINRDYITMLESLVRLG LEEAE+VLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 TLLQDLMEKEKATTPNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITAL 420
            LL+DLMEK K TTPNSWGAVAVQY+DRGETE ++ECMKAAL+LNMDKGWKPNLRVIT +
Sbjct: 361 ALLEDLMEKGKTTTPNSWGAVAVQYMDRGETEKSVECMKAALTLNMDKGWKPNLRVITGI 420

Query: 421 LNWLGDKGIIEEVEAFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDED 480
           LNWLG+   IEEVEAFVG+LRS IPVNREMYHAL+KVHIRGGKEV+ELL+QMKSDKIDED
Sbjct: 421 LNWLGENASIEEVEAFVGSLRSAIPVNREMYHALMKVHIRGGKEVHELLNQMKSDKIDED 480

Query: 481 EETKKILATWEETTEGKS 499
           EETKKIL T +ETTEG+S
Sbjct: 481 EETKKILGTGQETTEGRS 497

BLAST of Clc03G06300 vs. NCBI nr
Match: XP_023542644.1 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 899.8 bits (2324), Expect = 1.0e-257
Identity = 441/495 (89.09%), Postives = 471/495 (95.15%), Query Frame = 0

Query: 1   MDQKLFSKVLTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MDQ  FSK LTRYA+AGR YHTNRLKKATLYAKISPLGDPS+SVEPELDGWV+EGKKVR+
Sbjct: 1   MDQ-FFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPELDGWVKEGKKVRI 60

Query: 61  AELQRIIRDLRKRKRFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFN 120
           AELQRII DLRKRKRFTQALEVSEWMKK+GVCIFSP+EHAVQLDLIGRVRGYLSAE+YFN
Sbjct: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120

Query: 121 QLKEQDQTSNTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQH 180
           QLKEQDQT  TYGALLNCYVRQRQVEKSLSHLQKMKEMGFATS+LT+ND+MCLYTNVGQH
Sbjct: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTFNDMMCLYTNVGQH 180

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAV 240
           DKVPEVLAEMKEKN+SPDNFSYRICINSYG R DLEGMENVLKEMESQPHI+MDWNTYAV
Sbjct: 181 DKVPEVLAEMKEKNISPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTAT 300
           VANFFIKA LT+KAV+ALRK+EERLKSKDRIGHNHLISLYATLGNKEKVL+LWNLDKT  
Sbjct: 241 VANFFIKADLTEKAVDALRKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDA 300

Query: 301 TRFINRDYITMLESLVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TRFINRDYITMLESLVRLG LEEAE+VLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 TLLQDLMEKEKATTPNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITAL 420
            LL+DLMEK K TTPNSWGAVAVQY+DRGETE ++ECMKAAL+LNMDKGWKPNLRVIT +
Sbjct: 361 ALLEDLMEKGKTTTPNSWGAVAVQYMDRGETEKSVECMKAALTLNMDKGWKPNLRVITGI 420

Query: 421 LNWLGDKGIIEEVEAFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDED 480
           LNWLG+   IEEVEAFVG+LRSVIPVNREMYHAL+K HIRGGKEV+ELL+QMKSDK+DED
Sbjct: 421 LNWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKLDED 480

Query: 481 EETKKILATWEETTE 496
           EETKKIL T +ETTE
Sbjct: 481 EETKKILGTGQETTE 494

BLAST of Clc03G06300 vs. NCBI nr
Match: XP_008442422.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial [Cucumis melo] >KAA0056983.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK26410.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 898.3 bits (2320), Expect = 3.0e-257
Identity = 442/499 (88.58%), Postives = 470/499 (94.19%), Query Frame = 0

Query: 1   MDQKLFSKVLTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MDQKLFSK LT YA+A RSYHT RLKKATLYAKISPLGDPSISVE ELDGWVQEGKKVRV
Sbjct: 1   MDQKLFSKALTHYALASRSYHTTRLKKATLYAKISPLGDPSISVESELDGWVQEGKKVRV 60

Query: 61  AELQRIIRDLRKRKRFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFN 120
           AELQRIIRD RKR RF+QAL+VSEWMKKSG CIFSPTEHAVQLDLIGRVRGYLSAE YFN
Sbjct: 61  AELQRIIRDFRKRSRFSQALQVSEWMKKSGACIFSPTEHAVQLDLIGRVRGYLSAEKYFN 120

Query: 121 QLKEQDQTSNTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQH 180
           QLKEQDQ   TYGALLNCYVRQ+QV+KSLSHLQKMKE+GFATS+LTYNDIMCLYT VGQH
Sbjct: 121 QLKEQDQNIKTYGALLNCYVRQQQVDKSLSHLQKMKELGFATSELTYNDIMCLYTRVGQH 180

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAV 240
           +KVPEVLAEMK  NVSPDNFSYRICINSYG R DLEGMENVLKEMESQPHI+MDWNTYAV
Sbjct: 181 EKVPEVLAEMKGNNVSPDNFSYRICINSYGARKDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTAT 300
           VANFFIKAGLTDKAV+ALRKSEE+LKSKDRIGHNHLISLYATLGNKEKVL++WNLDKTAT
Sbjct: 241 VANFFIKAGLTDKAVDALRKSEEKLKSKDRIGHNHLISLYATLGNKEKVLRVWNLDKTAT 300

Query: 301 TRFINRDYITMLESLVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRLG LEEAE+VLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRIINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 TLLQDLMEKEKATTPNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITAL 420
           TLL++L + EKATTPNSWGAVAV+YLDRGETE ALECMKAALS+N DKGWKPN RVIT +
Sbjct: 361 TLLENLNQNEKATTPNSWGAVAVKYLDRGETEKALECMKAALSVNTDKGWKPNPRVITGV 420

Query: 421 LNWLGDKGIIEEVEAFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDED 480
           LNWLGDKGI+EEVEAFV ALRSVIPVNREMYHAL+KV+IR  KEVNE+L++MK+DKI+ED
Sbjct: 421 LNWLGDKGIVEEVEAFVSALRSVIPVNREMYHALLKVYIRADKEVNEVLNKMKADKINED 480

Query: 481 EETKKILATWEETTEGKSI 500
           EETKKIL TWEETTEGKSI
Sbjct: 481 EETKKILGTWEETTEGKSI 499

BLAST of Clc03G06300 vs. NCBI nr
Match: KAG7012430.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 897.1 bits (2317), Expect = 6.8e-257
Identity = 441/495 (89.09%), Postives = 469/495 (94.75%), Query Frame = 0

Query: 1   MDQKLFSKVLTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MDQ  FSK LTRYA+AGR YHTNRLKKATLYAKISPLGDPS+SVEP LDGWV+EGKKVR+
Sbjct: 1   MDQ-FFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRI 60

Query: 61  AELQRIIRDLRKRKRFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFN 120
           AELQRII DLRKRKRFTQALEVSEWMKK+GVCIFSP+EHAVQLDLIGRVRGYLSAE+YFN
Sbjct: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120

Query: 121 QLKEQDQTSNTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQH 180
           QLKEQDQT  TYGALLNCYVRQRQVEKSLSHLQKMKEMGFATS+LTYND+MCLYTNVGQH
Sbjct: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAV 240
           DKVPEVLAEMKEKNVSPDNFSYRICINSYG R DLEGMENVLKEMESQPHI+MDWNTYAV
Sbjct: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTAT 300
           VANFFIKA L DKAV+AL+K+EERLKSKDRIGHNHLISLYATLGNKEKVL+LWNLDKT T
Sbjct: 241 VANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDT 300

Query: 301 TRFINRDYITMLESLVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRLG LEEAE+VLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 TLLQDLMEKEKATTPNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITAL 420
            LL+DLMEK K TTPNSWGAVAVQY+DR ETE ++ECMKAAL+LNMDKGWKPNLRVIT +
Sbjct: 361 ALLEDLMEKGKTTTPNSWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGI 420

Query: 421 LNWLGDKGIIEEVEAFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDED 480
           LNWLG+ G IEEVEAFVG+LRSVIPVNREMYHAL+K HIRGGKEV+ELL+QMKSDK+DED
Sbjct: 421 LNWLGENGSIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKLDED 480

Query: 481 EETKKILATWEETTE 496
           EETKKIL T +ETTE
Sbjct: 481 EETKKILGTGQETTE 494

BLAST of Clc03G06300 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 6.3e-173
Identity = 295/477 (61.84%), Postives = 373/477 (78.20%), Query Frame = 0

Query: 15  IAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIRDLRKRK 74
           IA R Y+TNR+KK TLY+KISPLGDP  SV PEL  WVQ GKKV VAEL RI+ DLR+RK
Sbjct: 12  IASRYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRK 71

Query: 75  RFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFNQLKEQDQTSNTYGA 134
           RF  ALEVS+WM ++GVC+FSPTEHAV LDLIGRV G+++AE YF  LKEQ +   TYGA
Sbjct: 72  RFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGA 131

Query: 135 LLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQHDKVPEVLAEMKEKN 194
           LLNCYVRQ+ VEKSL H +KMKEMGF TS LTYN+IMCLYTN+GQH+KVP+VL EMKE+N
Sbjct: 132 LLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEEN 191

Query: 195 VSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAVVANFFIKAGLTDKA 254
           V+PDN+SYRICIN++G  +DLE +   L++ME +  I MDWNTYAV A F+I  G  D+A
Sbjct: 192 VAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRA 251

Query: 255 VNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTATTRFINRDYITMLES 314
           V  L+ SE RL+ KD  G+NHLI+LYA LG K +VL+LW+L+K    R IN+DY+T+L+S
Sbjct: 252 VELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQS 311

Query: 315 LVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAETLLQDLMEKEKATT 374
           LV++  L EAEEVL EW+SSGNCYDFRVPNTVI GYI K M E+AE +L+DL  + KATT
Sbjct: 312 LVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATT 371

Query: 375 PNSWGAVAVQYLDRGETENALECMKAALSLNM-DKGWKPNLRVITALLNWLGDKGIIEEV 434
           P SW  VA  Y ++G  ENA +CMK AL + +  + W+P L ++T++L+W+GD+G ++EV
Sbjct: 372 PESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEV 431

Query: 435 EAFVGALRSVIPVNREMYHALIKVHIR-GGKEVNELLDQMKSDKIDEDEETKKILAT 490
           E+FV +LR+ I VN++MYHAL+K  IR GG+ ++ LL +MK DKI+ DEET  IL+T
Sbjct: 432 ESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILST 488

BLAST of Clc03G06300 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.0e-77
Identity = 148/397 (37.28%), Postives = 246/397 (61.96%), Query Frame = 0

Query: 29  TLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIRDLRKRKRFTQALEVSEWMKK 88
           TL  +++  GDPS S+   LDGW+ +G  V+ +EL  II+ LRK  RF+ AL++S+WM +
Sbjct: 39  TLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSE 98

Query: 89  SGVCIFSPTEHAVQLDLIGRVRGYLSAENYFNQLKEQDQTSNTYGALLNCYVRQRQVEKS 148
             V   S  + A++LDLI +V G   AE +F  +  + +  + YGALLNCY  ++ + K+
Sbjct: 99  HRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 158

Query: 149 LSHLQKMKEMGFATSQLTYNDIMCLYTNVGQHDKVPEVLAEMKEKNVSPDNFSYRICINS 208
               Q+MKE+GF    L YN ++ LY   G++  V ++L EM+++ V PD F+    +++
Sbjct: 159 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHA 218

Query: 209 YGVRHDLEGMENVLKEMESQPHIIMDWNTYAVVANFFIKAGLTDKAVNALRKSEERLKS- 268
           Y V  D+EGME  L   E+   + +DW TYA  AN +IKAGLT+KA+  LRKSE+ + + 
Sbjct: 219 YSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQ 278

Query: 269 KDRIGHNHLISLYATLGNKEKVLKLWNLDKTATTRFINRDYITMLESLVRLGGLEEAEEV 328
           K +  +  L+S Y   G KE+V +LW+L K     F N  YI+++ +L+++  +EE E++
Sbjct: 279 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYK-ELDGFYNTGYISVISALLKMDDIEEVEKI 338

Query: 329 LKEWESSGNCYDFRVPNTVIVGYIDKGMCERAETLLQDLMEKEKATTPNSWGAVAVQYLD 388
           ++EWE+  + +D R+P+ +I GY  KGM E+AE ++  L++K +    ++W  +A+ Y  
Sbjct: 339 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKM 398

Query: 389 RGETENALECMKAALSLNMDKGWKPNLRVITALLNWL 425
            G+ E A+E  K A+ ++   GW+P+  V+ + +++L
Sbjct: 399 AGKMEKAVEKWKRAIEVS-KPGWRPHQVVLMSCVDYL 433

BLAST of Clc03G06300 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 283.5 bits (724), Expect = 4.7e-75
Identity = 157/455 (34.51%), Postives = 257/455 (56.48%), Query Frame = 0

Query: 30  LYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIRDLRKRKRFTQALEVSEWMKKS 89
           +Y KIS +  P +     L+ W + G+K+   EL R++++LRK KR  QALEV +WM   
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 90  GVCI-FSPTEHAVQLDLIGRVRGYLSAENYFNQLKEQDQTSNTYGALLNCYVRQRQVEKS 149
           G     S ++ A+QLDLIG+VRG   AE +F QL E  +    YG+LLN YVR +  EK+
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 150 LSHLQKMKEMGFATSQLTYNDIMCLYTNVGQHDKVPEVLAEMKEKNVSPDNFSYRICINS 209
            + L  M++ G+A   L +N +M LY N+ ++DKV  ++ EMK+K++  D +SY I ++S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248

Query: 210 YGVRHDLEGMENVLKEMESQPHIIMDWNTYAVVANFFIKAGLTDKAVNALRKSEERLKSK 269
            G    +E ME V ++M+S   I  +W T++ +A  +IK G T+KA +ALRK E R+  +
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308

Query: 270 DRIGHNHLISLYATLGNKEKVLKLWNLDKTATTRFINRDYITMLESLVRLGGLEEAEEVL 329
           +RI +++L+SLY +LGNK+++ ++W++ K+      N  Y  ++ SLVR+G +E AE+V 
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368

Query: 330 KEWESSGNCYDFRVPNTVIVGYIDKGMCERAETLLQDLMEKEKATTPNSWGAVAVQYLDR 389
           +EW    + YD R+PN ++  Y+     E AE L   ++E     + ++W  +AV +  +
Sbjct: 369 EEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRK 428

Query: 390 GETENALECMKAALSLNMDKGWKPNLRVITALLNWLGDKGIIEEVEAFVGALRSVIPVNR 449
                AL C++ A S      W+P + +++       ++  +   EA +  LR    +  
Sbjct: 429 RCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLED 488

Query: 450 EMYHALIKVHIR--------GGKEVNELLDQMKSD 476
           + Y ALI V              E + LL Q++ D
Sbjct: 489 KSYLALIDVDENRTVNNSEIDAHETDALLTQLQDD 523

BLAST of Clc03G06300 vs. ExPASy Swiss-Prot
Match: Q93WC5 (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01990 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.1e-71
Identity = 152/474 (32.07%), Postives = 265/474 (55.91%), Query Frame = 0

Query: 16  AGRSYHTNRLKKATLYAKISPLGD-PSISVEPELDGWVQEGKKVRVAELQRIIRDLRKRK 75
           A  S  T   K  ++Y K+S LG      +E  L+ +V EG  V+  +L R  +DLRK +
Sbjct: 27  AAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFR 86

Query: 76  RFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFNQLKEQDQTSNTYGA 135
           +  +ALE+ EWM++  +  F+ ++HA++L+LI + +G  +AE YFN L +  +  +TYG+
Sbjct: 87  QPQRALEIFEWMERKEIA-FTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGS 146

Query: 136 LLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQHDKVPEVLAEMKEKN 195
           LLNCY  +++  K+ +H + M ++   ++ L +N++M +Y  +GQ +KVP ++  MKEK+
Sbjct: 147 LLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKS 206

Query: 196 VSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAVVANFFIKAGLTDKA 255
           ++P + +Y + I S G   DL+G+E VL EM+++   I  WNT+A +A  +IK GL  KA
Sbjct: 207 ITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKA 266

Query: 256 VNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTATTRFINRDYITMLES 315
             AL+  E  +    R  ++ LI+LY  + N  +V ++W+L K       N  Y+TML +
Sbjct: 267 EEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRA 326

Query: 316 LVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAETLLQDLMEKEKATT 375
           L +L  ++  ++V  EWES+   YD R+ N  I  Y+ + M E AE +    M+K K   
Sbjct: 327 LSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQF 386

Query: 376 PNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITALLNWLGDKGIIEEVE 435
             +   + +  L   + + AL+  +AA+ L+ DK W  +  +I++      +   ++  E
Sbjct: 387 SKARQLLMMHLLKNDQADLALKHFEAAV-LDQDKNWTWSSELISSFFLHFEEAKDVDGAE 446

Query: 436 AFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDEDEETKKILA 489
            F   L    P++ E Y  L+K ++  GK   ++  +++   I  DEE + +L+
Sbjct: 447 EFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLLS 498

BLAST of Clc03G06300 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 5.9e-70
Identity = 143/469 (30.49%), Postives = 256/469 (54.58%), Query Frame = 0

Query: 22  TNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIRDLRKRKRFTQALE 81
           T +  +  LY ++   G   + V  +L+ +++  K V   E+   I+ LR R  +  AL+
Sbjct: 17  TKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALK 76

Query: 82  VSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFNQLKEQDQTSNTYGALLNCYVR 141
           +SE M++ G+   + ++ A+ LDL+ + R   + ENYF  L E  +T  TYG+LLNCY +
Sbjct: 77  LSEVMEERGM-NKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCK 136

Query: 142 QRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQHDKVPEVLAEMKEKNVSPDNFS 201
           +   EK+   L KMKE+    S ++YN +M LYT  G+ +KVP ++ E+K +NV PD+++
Sbjct: 137 ELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYT 196

Query: 202 YRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAVVANFFIKAGLTDKAVNALRKS 261
           Y + + +    +D+ G+E V++EM     +  DW TY+ +A+ ++ AGL+ KA  AL++ 
Sbjct: 197 YNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQEL 256

Query: 262 EERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTATTRFINRDYITMLESLVRLGGL 321
           E +   +D   +  LI+LY  LG   +V ++W   + A  +  N  Y+ M++ LV+L  L
Sbjct: 257 EMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDL 316

Query: 322 EEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAETLLQDLMEKEKATTPNSWGAV 381
             AE + KEW+++ + YD R+ N +I  Y  +G+ ++A  L +    +       +W   
Sbjct: 317 PGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIF 376

Query: 382 AVQYLDRGETENALECMKAALSLNMDKG--WKPNLRVITALLNWLGDKGIIEEVEAFVGA 441
              Y+  G+   ALECM  A+S+    G  W P+   + AL+++   K  +   E  +  
Sbjct: 377 MDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEI 436

Query: 442 LRS-VIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDEDEETKKIL 488
           L++    +  E++  LI+ +   GK    +  ++K + ++ +E TKK+L
Sbjct: 437 LKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLL 484

BLAST of Clc03G06300 vs. ExPASy TrEMBL
Match: A0A6J1K124 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111490120 PE=4 SV=1)

HSP 1 Score: 902.1 bits (2330), Expect = 1.0e-258
Identity = 443/498 (88.96%), Postives = 472/498 (94.78%), Query Frame = 0

Query: 1   MDQKLFSKVLTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MDQ  FSK LTRYA+A R YHTNRLKKATLYAKISPLGDP++SVEPELDGWV+EGKKVR+
Sbjct: 1   MDQ-FFSKALTRYALADRFYHTNRLKKATLYAKISPLGDPNVSVEPELDGWVKEGKKVRI 60

Query: 61  AELQRIIRDLRKRKRFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFN 120
           AELQRII DLRKRKRFTQALEVSEWMKK+GVCIFSP+EHAVQLDLIGRVRGYLSAE+YFN
Sbjct: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120

Query: 121 QLKEQDQTSNTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQH 180
           QLKEQDQT  TYGALLNCYVRQRQVEKSLSHLQKMKEMGFATS+LTYND+MCLYTNVGQH
Sbjct: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAV 240
           DKVPEVLAEMKEKNVSPDNFSYRICINSYG R DLEGMENVLKEMESQPHI+MDWNTYAV
Sbjct: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTAT 300
           VANFFIKA L DKAV+AL+K+EERLKSKDRIGHNHLISLY TLGNKEKVL+LWNLDKT T
Sbjct: 241 VANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYTTLGNKEKVLRLWNLDKTDT 300

Query: 301 TRFINRDYITMLESLVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TRFINRDYITMLESLVRLG LEEAE+VLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 TLLQDLMEKEKATTPNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITAL 420
            LL+DLMEK K TTPNSWGAVAVQY+DRGETE ++ECMKAAL+LNMDKGWKPNLRVIT +
Sbjct: 361 ALLEDLMEKGKTTTPNSWGAVAVQYMDRGETEKSVECMKAALTLNMDKGWKPNLRVITGI 420

Query: 421 LNWLGDKGIIEEVEAFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDED 480
           LNWLG+   IEEVEAFVG+LRS IPVNREMYHAL+KVHIRGGKEV+ELL+QMKSDKIDED
Sbjct: 421 LNWLGENASIEEVEAFVGSLRSAIPVNREMYHALMKVHIRGGKEVHELLNQMKSDKIDED 480

Query: 481 EETKKILATWEETTEGKS 499
           EETKKIL T +ETTEG+S
Sbjct: 481 EETKKILGTGQETTEGRS 497

BLAST of Clc03G06300 vs. ExPASy TrEMBL
Match: A0A5A7UM45 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00740 PE=4 SV=1)

HSP 1 Score: 898.3 bits (2320), Expect = 1.5e-257
Identity = 442/499 (88.58%), Postives = 470/499 (94.19%), Query Frame = 0

Query: 1   MDQKLFSKVLTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MDQKLFSK LT YA+A RSYHT RLKKATLYAKISPLGDPSISVE ELDGWVQEGKKVRV
Sbjct: 1   MDQKLFSKALTHYALASRSYHTTRLKKATLYAKISPLGDPSISVESELDGWVQEGKKVRV 60

Query: 61  AELQRIIRDLRKRKRFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFN 120
           AELQRIIRD RKR RF+QAL+VSEWMKKSG CIFSPTEHAVQLDLIGRVRGYLSAE YFN
Sbjct: 61  AELQRIIRDFRKRSRFSQALQVSEWMKKSGACIFSPTEHAVQLDLIGRVRGYLSAEKYFN 120

Query: 121 QLKEQDQTSNTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQH 180
           QLKEQDQ   TYGALLNCYVRQ+QV+KSLSHLQKMKE+GFATS+LTYNDIMCLYT VGQH
Sbjct: 121 QLKEQDQNIKTYGALLNCYVRQQQVDKSLSHLQKMKELGFATSELTYNDIMCLYTRVGQH 180

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAV 240
           +KVPEVLAEMK  NVSPDNFSYRICINSYG R DLEGMENVLKEMESQPHI+MDWNTYAV
Sbjct: 181 EKVPEVLAEMKGNNVSPDNFSYRICINSYGARKDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTAT 300
           VANFFIKAGLTDKAV+ALRKSEE+LKSKDRIGHNHLISLYATLGNKEKVL++WNLDKTAT
Sbjct: 241 VANFFIKAGLTDKAVDALRKSEEKLKSKDRIGHNHLISLYATLGNKEKVLRVWNLDKTAT 300

Query: 301 TRFINRDYITMLESLVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRLG LEEAE+VLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRIINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 TLLQDLMEKEKATTPNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITAL 420
           TLL++L + EKATTPNSWGAVAV+YLDRGETE ALECMKAALS+N DKGWKPN RVIT +
Sbjct: 361 TLLENLNQNEKATTPNSWGAVAVKYLDRGETEKALECMKAALSVNTDKGWKPNPRVITGV 420

Query: 421 LNWLGDKGIIEEVEAFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDED 480
           LNWLGDKGI+EEVEAFV ALRSVIPVNREMYHAL+KV+IR  KEVNE+L++MK+DKI+ED
Sbjct: 421 LNWLGDKGIVEEVEAFVSALRSVIPVNREMYHALLKVYIRADKEVNEVLNKMKADKINED 480

Query: 481 EETKKILATWEETTEGKSI 500
           EETKKIL TWEETTEGKSI
Sbjct: 481 EETKKILGTWEETTEGKSI 499

BLAST of Clc03G06300 vs. ExPASy TrEMBL
Match: A0A1S3B5N2 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486296 PE=4 SV=1)

HSP 1 Score: 898.3 bits (2320), Expect = 1.5e-257
Identity = 442/499 (88.58%), Postives = 470/499 (94.19%), Query Frame = 0

Query: 1   MDQKLFSKVLTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MDQKLFSK LT YA+A RSYHT RLKKATLYAKISPLGDPSISVE ELDGWVQEGKKVRV
Sbjct: 1   MDQKLFSKALTHYALASRSYHTTRLKKATLYAKISPLGDPSISVESELDGWVQEGKKVRV 60

Query: 61  AELQRIIRDLRKRKRFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFN 120
           AELQRIIRD RKR RF+QAL+VSEWMKKSG CIFSPTEHAVQLDLIGRVRGYLSAE YFN
Sbjct: 61  AELQRIIRDFRKRSRFSQALQVSEWMKKSGACIFSPTEHAVQLDLIGRVRGYLSAEKYFN 120

Query: 121 QLKEQDQTSNTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQH 180
           QLKEQDQ   TYGALLNCYVRQ+QV+KSLSHLQKMKE+GFATS+LTYNDIMCLYT VGQH
Sbjct: 121 QLKEQDQNIKTYGALLNCYVRQQQVDKSLSHLQKMKELGFATSELTYNDIMCLYTRVGQH 180

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAV 240
           +KVPEVLAEMK  NVSPDNFSYRICINSYG R DLEGMENVLKEMESQPHI+MDWNTYAV
Sbjct: 181 EKVPEVLAEMKGNNVSPDNFSYRICINSYGARKDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTAT 300
           VANFFIKAGLTDKAV+ALRKSEE+LKSKDRIGHNHLISLYATLGNKEKVL++WNLDKTAT
Sbjct: 241 VANFFIKAGLTDKAVDALRKSEEKLKSKDRIGHNHLISLYATLGNKEKVLRVWNLDKTAT 300

Query: 301 TRFINRDYITMLESLVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRLG LEEAE+VLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRIINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 TLLQDLMEKEKATTPNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITAL 420
           TLL++L + EKATTPNSWGAVAV+YLDRGETE ALECMKAALS+N DKGWKPN RVIT +
Sbjct: 361 TLLENLNQNEKATTPNSWGAVAVKYLDRGETEKALECMKAALSVNTDKGWKPNPRVITGV 420

Query: 421 LNWLGDKGIIEEVEAFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDED 480
           LNWLGDKGI+EEVEAFV ALRSVIPVNREMYHAL+KV+IR  KEVNE+L++MK+DKI+ED
Sbjct: 421 LNWLGDKGIVEEVEAFVSALRSVIPVNREMYHALLKVYIRADKEVNEVLNKMKADKINED 480

Query: 481 EETKKILATWEETTEGKSI 500
           EETKKIL TWEETTEGKSI
Sbjct: 481 EETKKILGTWEETTEGKSI 499

BLAST of Clc03G06300 vs. ExPASy TrEMBL
Match: A0A6J1GTN5 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457015 PE=4 SV=1)

HSP 1 Score: 896.3 bits (2315), Expect = 5.6e-257
Identity = 442/499 (88.58%), Postives = 469/499 (93.99%), Query Frame = 0

Query: 1   MDQKLFSKVLTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MDQ  FSK LTRYA+AGR YHTNRLKKATLYAKISPLGDPS+SVEP LDGWV+EGKKVR+
Sbjct: 1   MDQ-FFSKALTRYALAGRFYHTNRLKKATLYAKISPLGDPSVSVEPVLDGWVKEGKKVRI 60

Query: 61  AELQRIIRDLRKRKRFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFN 120
           AELQRII DLRKRKRFTQALEVSEWMKK+GVCIFSP+EHAVQLDLIGRVRGYLSAE+YFN
Sbjct: 61  AELQRIIHDLRKRKRFTQALEVSEWMKKTGVCIFSPSEHAVQLDLIGRVRGYLSAESYFN 120

Query: 121 QLKEQDQTSNTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQH 180
           QLKEQDQT  TYGALLNCYVRQRQVEKSLSHLQKMKEMGFATS+LTYND+MCLYTNVGQH
Sbjct: 121 QLKEQDQTDKTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 180

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAV 240
           DKVPEVLAEMKEKNVSPDNFSYRICINSYG R DLEGMENVLKEMESQPHI+MDWNTYAV
Sbjct: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGARRDLEGMENVLKEMESQPHIVMDWNTYAV 240

Query: 241 VANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTAT 300
           VANFFIKA L DKAV+AL+K+EERLKSKDRIGHNHLISLYATLGNKEKVL+LWNLDKT T
Sbjct: 241 VANFFIKADLADKAVDALKKAEERLKSKDRIGHNHLISLYATLGNKEKVLRLWNLDKTDT 300

Query: 301 TRFINRDYITMLESLVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TR INRDYITMLESLVRLG LEEAE+VLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 301 TRLINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360

Query: 361 TLLQDLMEKEKATTPNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITAL 420
            LL+DLMEK K TTPN WGAVAVQY+DR ETE ++ECMKAAL+LNMDKGWKPNLRVIT +
Sbjct: 361 ALLEDLMEKGKTTTPNCWGAVAVQYMDRSETEKSVECMKAALTLNMDKGWKPNLRVITGI 420

Query: 421 LNWLGDKGIIEEVEAFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDED 480
           LNWLG+   IEEVEAFVG+LRSVIPVNREMYHAL+K HIRGGKEV+ELL+QMKSDKIDED
Sbjct: 421 LNWLGENASIEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHELLNQMKSDKIDED 480

Query: 481 EETKKILATWEETTEGKSI 500
           EETKKIL T +ETTEG  I
Sbjct: 481 EETKKILGTGQETTEGDLI 498

BLAST of Clc03G06300 vs. ExPASy TrEMBL
Match: A0A6J1CGU2 (pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111010721 PE=4 SV=1)

HSP 1 Score: 892.5 bits (2305), Expect = 8.1e-256
Identity = 436/499 (87.37%), Postives = 470/499 (94.19%), Query Frame = 0

Query: 1   MDQKLFSKVLTRYAIAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRV 60
           MDQ LFSK LTRYA+AGRSYHTNR+KKATLYAKISPLGDPSISV PELDGWVQEGKK+RV
Sbjct: 10  MDQNLFSKALTRYAMAGRSYHTNRMKKATLYAKISPLGDPSISVGPELDGWVQEGKKIRV 69

Query: 61  AELQRIIRDLRKRKRFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFN 120
           AELQRII DLRKRKRFTQALEVSEWMK+SGVCIFSP+EHAVQLDLIGRVRGYLSAE+YF+
Sbjct: 70  AELQRIIHDLRKRKRFTQALEVSEWMKQSGVCIFSPSEHAVQLDLIGRVRGYLSAESYFD 129

Query: 121 QLKEQDQTSNTYGALLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQH 180
           QLK+QD+T  TYGALLNCYVRQRQV+KSLSHLQKMKEMGFATS+LTYND+MCLYTNVGQH
Sbjct: 130 QLKDQDKTGKTYGALLNCYVRQRQVDKSLSHLQKMKEMGFATSELTYNDMMCLYTNVGQH 189

Query: 181 DKVPEVLAEMKEKNVSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAV 240
           DKVP+VLAEMKE  VSPDNFSYRICINSYG R DLEGME+VLKEMESQPHI+MDWNTYAV
Sbjct: 190 DKVPQVLAEMKENKVSPDNFSYRICINSYGTRCDLEGMESVLKEMESQPHIVMDWNTYAV 249

Query: 241 VANFFIKAGLTDKAVNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTAT 300
           VANFFIK GLTDKAV+ALRKSEERL SKDRIGHNHLISLYATLGNKE+VL+LW LDK+ +
Sbjct: 250 VANFFIKGGLTDKAVDALRKSEERLNSKDRIGHNHLISLYATLGNKEEVLRLWKLDKSDS 309

Query: 301 TRFINRDYITMLESLVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 360
           TRFINRDYITMLESLVRLG LEEAE+VLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE
Sbjct: 310 TRFINRDYITMLESLVRLGELEEAEKVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAE 369

Query: 361 TLLQDLMEKEKATTPNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITAL 420
            LL+DLM++ KATTPNSWGAVAVQYLDRGETE A+ECMK ALSL++DKGWKPNLRVIT +
Sbjct: 370 ALLEDLMKEGKATTPNSWGAVAVQYLDRGETEKAVECMKTALSLHIDKGWKPNLRVITGI 429

Query: 421 LNWLGDKGIIEEVEAFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDED 480
           LNW+GD    EEVEAFVG+LRSVIPVNREMYHAL+K HIRGGKEV+ LL QMKSD+IDED
Sbjct: 430 LNWIGDNSSTEEVEAFVGSLRSVIPVNREMYHALMKAHIRGGKEVHGLLSQMKSDQIDED 489

Query: 481 EETKKILATWEETTEGKSI 500
           EETKKIL TW+E TEGKSI
Sbjct: 490 EETKKILGTWQEATEGKSI 508

BLAST of Clc03G06300 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 608.6 bits (1568), Expect = 4.5e-174
Identity = 295/477 (61.84%), Postives = 373/477 (78.20%), Query Frame = 0

Query: 15  IAGRSYHTNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIRDLRKRK 74
           IA R Y+TNR+KK TLY+KISPLGDP  SV PEL  WVQ GKKV VAEL RI+ DLR+RK
Sbjct: 12  IASRYYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRK 71

Query: 75  RFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFNQLKEQDQTSNTYGA 134
           RF  ALEVS+WM ++GVC+FSPTEHAV LDLIGRV G+++AE YF  LKEQ +   TYGA
Sbjct: 72  RFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGA 131

Query: 135 LLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQHDKVPEVLAEMKEKN 194
           LLNCYVRQ+ VEKSL H +KMKEMGF TS LTYN+IMCLYTN+GQH+KVP+VL EMKE+N
Sbjct: 132 LLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEEN 191

Query: 195 VSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAVVANFFIKAGLTDKA 254
           V+PDN+SYRICIN++G  +DLE +   L++ME +  I MDWNTYAV A F+I  G  D+A
Sbjct: 192 VAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRA 251

Query: 255 VNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTATTRFINRDYITMLES 314
           V  L+ SE RL+ KD  G+NHLI+LYA LG K +VL+LW+L+K    R IN+DY+T+L+S
Sbjct: 252 VELLKMSENRLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQS 311

Query: 315 LVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAETLLQDLMEKEKATT 374
           LV++  L EAEEVL EW+SSGNCYDFRVPNTVI GYI K M E+AE +L+DL  + KATT
Sbjct: 312 LVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATT 371

Query: 375 PNSWGAVAVQYLDRGETENALECMKAALSLNM-DKGWKPNLRVITALLNWLGDKGIIEEV 434
           P SW  VA  Y ++G  ENA +CMK AL + +  + W+P L ++T++L+W+GD+G ++EV
Sbjct: 372 PESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEV 431

Query: 435 EAFVGALRSVIPVNREMYHALIKVHIR-GGKEVNELLDQMKSDKIDEDEETKKILAT 490
           E+FV +LR+ I VN++MYHAL+K  IR GG+ ++ LL +MK DKI+ DEET  IL+T
Sbjct: 432 ESFVASLRNCIGVNKQMYHALVKADIREGGRNIDTLLQRMKDDKIEIDEETTVILST 488

BLAST of Clc03G06300 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 290.0 bits (741), Expect = 3.5e-78
Identity = 148/397 (37.28%), Postives = 246/397 (61.96%), Query Frame = 0

Query: 29  TLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIRDLRKRKRFTQALEVSEWMKK 88
           TL  +++  GDPS S+   LDGW+ +G  V+ +EL  II+ LRK  RF+ AL++S+WM +
Sbjct: 39  TLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSE 98

Query: 89  SGVCIFSPTEHAVQLDLIGRVRGYLSAENYFNQLKEQDQTSNTYGALLNCYVRQRQVEKS 148
             V   S  + A++LDLI +V G   AE +F  +  + +  + YGALLNCY  ++ + K+
Sbjct: 99  HRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKA 158

Query: 149 LSHLQKMKEMGFATSQLTYNDIMCLYTNVGQHDKVPEVLAEMKEKNVSPDNFSYRICINS 208
               Q+MKE+GF    L YN ++ LY   G++  V ++L EM+++ V PD F+    +++
Sbjct: 159 EQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHA 218

Query: 209 YGVRHDLEGMENVLKEMESQPHIIMDWNTYAVVANFFIKAGLTDKAVNALRKSEERLKS- 268
           Y V  D+EGME  L   E+   + +DW TYA  AN +IKAGLT+KA+  LRKSE+ + + 
Sbjct: 219 YSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQ 278

Query: 269 KDRIGHNHLISLYATLGNKEKVLKLWNLDKTATTRFINRDYITMLESLVRLGGLEEAEEV 328
           K +  +  L+S Y   G KE+V +LW+L K     F N  YI+++ +L+++  +EE E++
Sbjct: 279 KRKHAYEVLMSFYGAAGKKEEVYRLWSLYK-ELDGFYNTGYISVISALLKMDDIEEVEKI 338

Query: 329 LKEWESSGNCYDFRVPNTVIVGYIDKGMCERAETLLQDLMEKEKATTPNSWGAVAVQYLD 388
           ++EWE+  + +D R+P+ +I GY  KGM E+AE ++  L++K +    ++W  +A+ Y  
Sbjct: 339 MEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKM 398

Query: 389 RGETENALECMKAALSLNMDKGWKPNLRVITALLNWL 425
            G+ E A+E  K A+ ++   GW+P+  V+ + +++L
Sbjct: 399 AGKMEKAVEKWKRAIEVS-KPGWRPHQVVLMSCVDYL 433

BLAST of Clc03G06300 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 283.5 bits (724), Expect = 3.3e-76
Identity = 157/455 (34.51%), Postives = 257/455 (56.48%), Query Frame = 0

Query: 30  LYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIRDLRKRKRFTQALEVSEWMKKS 89
           +Y KIS +  P +     L+ W + G+K+   EL R++++LRK KR  QALEV +WM   
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 90  GVCI-FSPTEHAVQLDLIGRVRGYLSAENYFNQLKEQDQTSNTYGALLNCYVRQRQVEKS 149
           G     S ++ A+QLDLIG+VRG   AE +F QL E  +    YG+LLN YVR +  EK+
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 150 LSHLQKMKEMGFATSQLTYNDIMCLYTNVGQHDKVPEVLAEMKEKNVSPDNFSYRICINS 209
            + L  M++ G+A   L +N +M LY N+ ++DKV  ++ EMK+K++  D +SY I ++S
Sbjct: 189 EALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSS 248

Query: 210 YGVRHDLEGMENVLKEMESQPHIIMDWNTYAVVANFFIKAGLTDKAVNALRKSEERLKSK 269
            G    +E ME V ++M+S   I  +W T++ +A  +IK G T+KA +ALRK E R+  +
Sbjct: 249 CGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGR 308

Query: 270 DRIGHNHLISLYATLGNKEKVLKLWNLDKTATTRFINRDYITMLESLVRLGGLEEAEEVL 329
           +RI +++L+SLY +LGNK+++ ++W++ K+      N  Y  ++ SLVR+G +E AE+V 
Sbjct: 309 NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 368

Query: 330 KEWESSGNCYDFRVPNTVIVGYIDKGMCERAETLLQDLMEKEKATTPNSWGAVAVQYLDR 389
           +EW    + YD R+PN ++  Y+     E AE L   ++E     + ++W  +AV +  +
Sbjct: 369 EEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRK 428

Query: 390 GETENALECMKAALSLNMDKGWKPNLRVITALLNWLGDKGIIEEVEAFVGALRSVIPVNR 449
                AL C++ A S      W+P + +++       ++  +   EA +  LR    +  
Sbjct: 429 RCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLED 488

Query: 450 EMYHALIKVHIR--------GGKEVNELLDQMKSD 476
           + Y ALI V              E + LL Q++ D
Sbjct: 489 KSYLALIDVDENRTVNNSEIDAHETDALLTQLQDD 523

BLAST of Clc03G06300 vs. TAIR 10
Match: AT4G01990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 270.4 bits (690), Expect = 2.9e-72
Identity = 152/474 (32.07%), Postives = 265/474 (55.91%), Query Frame = 0

Query: 16  AGRSYHTNRLKKATLYAKISPLGD-PSISVEPELDGWVQEGKKVRVAELQRIIRDLRKRK 75
           A  S  T   K  ++Y K+S LG      +E  L+ +V EG  V+  +L R  +DLRK +
Sbjct: 27  AAASVPTKAKKHRSIYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFR 86

Query: 76  RFTQALEVSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFNQLKEQDQTSNTYGA 135
           +  +ALE+ EWM++  +  F+ ++HA++L+LI + +G  +AE YFN L +  +  +TYG+
Sbjct: 87  QPQRALEIFEWMERKEIA-FTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGS 146

Query: 136 LLNCYVRQRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQHDKVPEVLAEMKEKN 195
           LLNCY  +++  K+ +H + M ++   ++ L +N++M +Y  +GQ +KVP ++  MKEK+
Sbjct: 147 LLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKS 206

Query: 196 VSPDNFSYRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAVVANFFIKAGLTDKA 255
           ++P + +Y + I S G   DL+G+E VL EM+++   I  WNT+A +A  +IK GL  KA
Sbjct: 207 ITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKA 266

Query: 256 VNALRKSEERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTATTRFINRDYITMLES 315
             AL+  E  +    R  ++ LI+LY  + N  +V ++W+L K       N  Y+TML +
Sbjct: 267 EEALKSLENNMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRA 326

Query: 316 LVRLGGLEEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAETLLQDLMEKEKATT 375
           L +L  ++  ++V  EWES+   YD R+ N  I  Y+ + M E AE +    M+K K   
Sbjct: 327 LSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQF 386

Query: 376 PNSWGAVAVQYLDRGETENALECMKAALSLNMDKGWKPNLRVITALLNWLGDKGIIEEVE 435
             +   + +  L   + + AL+  +AA+ L+ DK W  +  +I++      +   ++  E
Sbjct: 387 SKARQLLMMHLLKNDQADLALKHFEAAV-LDQDKNWTWSSELISSFFLHFEEAKDVDGAE 446

Query: 436 AFVGALRSVIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDEDEETKKILA 489
            F   L    P++ E Y  L+K ++  GK   ++  +++   I  DEE + +L+
Sbjct: 447 EFCKTLTKWSPLSSETYTLLMKTYLAAGKACPDMKKRLEEQGILVDEEQECLLS 498

BLAST of Clc03G06300 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 266.5 bits (680), Expect = 4.2e-71
Identity = 143/469 (30.49%), Postives = 256/469 (54.58%), Query Frame = 0

Query: 22  TNRLKKATLYAKISPLGDPSISVEPELDGWVQEGKKVRVAELQRIIRDLRKRKRFTQALE 81
           T +  +  LY ++   G   + V  +L+ +++  K V   E+   I+ LR R  +  AL+
Sbjct: 17  TKKYIEEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALK 76

Query: 82  VSEWMKKSGVCIFSPTEHAVQLDLIGRVRGYLSAENYFNQLKEQDQTSNTYGALLNCYVR 141
           +SE M++ G+   + ++ A+ LDL+ + R   + ENYF  L E  +T  TYG+LLNCY +
Sbjct: 77  LSEVMEERGM-NKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCK 136

Query: 142 QRQVEKSLSHLQKMKEMGFATSQLTYNDIMCLYTNVGQHDKVPEVLAEMKEKNVSPDNFS 201
           +   EK+   L KMKE+    S ++YN +M LYT  G+ +KVP ++ E+K +NV PD+++
Sbjct: 137 ELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYT 196

Query: 202 YRICINSYGVRHDLEGMENVLKEMESQPHIIMDWNTYAVVANFFIKAGLTDKAVNALRKS 261
           Y + + +    +D+ G+E V++EM     +  DW TY+ +A+ ++ AGL+ KA  AL++ 
Sbjct: 197 YNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQEL 256

Query: 262 EERLKSKDRIGHNHLISLYATLGNKEKVLKLWNLDKTATTRFINRDYITMLESLVRLGGL 321
           E +   +D   +  LI+LY  LG   +V ++W   + A  +  N  Y+ M++ LV+L  L
Sbjct: 257 EMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDL 316

Query: 322 EEAEEVLKEWESSGNCYDFRVPNTVIVGYIDKGMCERAETLLQDLMEKEKATTPNSWGAV 381
             AE + KEW+++ + YD R+ N +I  Y  +G+ ++A  L +    +       +W   
Sbjct: 317 PGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIF 376

Query: 382 AVQYLDRGETENALECMKAALSLNMDKG--WKPNLRVITALLNWLGDKGIIEEVEAFVGA 441
              Y+  G+   ALECM  A+S+    G  W P+   + AL+++   K  +   E  +  
Sbjct: 377 MDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEI 436

Query: 442 LRS-VIPVNREMYHALIKVHIRGGKEVNELLDQMKSDKIDEDEETKKIL 488
           L++    +  E++  LI+ +   GK    +  ++K + ++ +E TKK+L
Sbjct: 437 LKNGTDNIGAEIFEPLIRTYAAAGKSHPAMRRRLKMENVEVNEATKKLL 484

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038893646.11.6e-26993.75pentatricopeptide repeat-containing protein At4g21705, mitochondrial [Benincasa ... [more]
XP_022994385.12.1e-25888.96pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ... [more]
XP_023542644.11.0e-25789.09pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ... [more]
XP_008442422.13.0e-25788.58PREDICTED: pentatricopeptide repeat-containing protein At4g21705, mitochondrial ... [more]
KAG7012430.16.8e-25789.09Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
Q84JR36.3e-17361.84Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop... [more]
Q9SKU65.0e-7737.28Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
Q8LPS64.7e-7534.51Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX... [more]
Q93WC54.1e-7132.07Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidop... [more]
O227145.9e-7030.49Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1K1241.0e-25888.96pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ... [more]
A0A5A7UM451.5e-25788.58Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B5N21.5e-25788.58pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Cucumis ... [more]
A0A6J1GTN55.6e-25788.58pentatricopeptide repeat-containing protein At4g21705, mitochondrial isoform X1 ... [more]
A0A6J1CGU28.1e-25687.37pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Momordic... [more]
Match NameE-valueIdentityDescription
AT4G21705.14.5e-17461.84Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G20710.13.5e-7837.28Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G02150.13.3e-7634.51Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G01990.12.9e-7232.07Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G60770.14.2e-7130.49Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availablePANTHERPTHR45717OS12G0527900 PROTEINcoord: 17..489
NoneNo IPR availablePANTHERPTHR45717:SF20OS07G0598500 PROTEINcoord: 17..489
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 308..335
e-value: 0.021
score: 15.1
coord: 131..160
e-value: 1.5E-4
score: 21.8
coord: 344..369
e-value: 0.52
score: 10.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 165..209
e-value: 1.4E-8
score: 34.8
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 131..160
e-value: 5.8E-5
score: 21.0
coord: 166..198
e-value: 1.8E-5
score: 22.6
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 163..197
score: 9.952918
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 128..162
score: 9.788499
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 49..189
e-value: 1.6E-14
score: 55.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 406..499
e-value: 1.7E-6
score: 29.6
coord: 190..305
e-value: 3.1E-13
score: 51.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 306..405
e-value: 2.0E-8
score: 36.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 112..405
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 375..408
score: 8.2014

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc03G06300.1Clc03G06300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding