Clc03G06160 (gene) Watermelon (cordophanus) v2

Overview
NameClc03G06160
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein of unknown function (DUF1218)
LocationClcChr03: 5892912 .. 5895390 (+)
RNA-Seq ExpressionClc03G06160
SyntenyClc03G06160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAAATAAGCTGCTCAAAGAAATGCCATCACTTTCCTTTCTTCTACCCGCGCCAAACAAAAAGCCGAAGTTATTGCAGAGCTCACGGCCCTTCGATTTTCCCATTCCTTCTTCTTCTTATAACCCTCTTCAACTAAAACCCATTTGCGAGCTGTAAGTTTCGAAGTTGGTTTCCTTCTTTCCTCTCTGAATTTTGAATTTTTGTTTGTTCGACGGTTTCCAAGTTTTTCTGGTTGTTTTCCTTCTTGGGTTTCTCGTTGTAATTACAGGAATTTGGTGTGTTTGTAAGGTTGCTGGATCTTTGAATCATGGGTATGATCGTTTTGATTATGGTGTTTATCTTTGATCTTGTTGCTTTTGCACTTGCTGTTGCTGCAGAGCAGAGAAGAACCACTGTAAGTTTTTTGTATTTCTTCGAACTTTCTATTAATCGTTTTTATTGTTCCATGAATGTTGTTTTTCTGAGAAGTATCATTGGAAATTTGAAAAGGTTTGTGATTTTAATACTGGCTGTGCTGAAATGGCTCGGTGACTGGGTTAAGTTATAAATACAATTCTTTAGGTCTGATTAACTAGAAGAAATTTTTATCTCTATTATGCAATCTACCGGAGAGGGAATTTTTAGCTAATGATTCTGCTTAGTATGAAATGAAACGGCTTATTACACATAAAAGAGAAGACAAATTTGATTTACTGCACCCTGTGGCCTGAAGTAGTTTAAGCCATAGGAATCCCGTTTTTGGGTTATTTTTTGTGTTAGTAGTTTAAGTCATATATGAACAGTTTGGTTCTTTAAGTTTATGATATTAGGGCTCATGATTCTGATCCTAATGTTATTTGGAAGTGAAGATATGACTGGAGTATGATGTGTGTATCTTATTCCCAAAACCGATCCTTCTTTGGCAGGCCACGGTCGTTCAATCAGGCAATTCTAAATTCTGTGCCTATGATTCTGATATTGCAACTGGATTAGGTGTGGGTTCACTTCTGGTCCTATTTGCTAGCCAAGTGATTGTAATGGTGGCAAGTCGATGCTTATGCTGTGGGAGAGCCTTGCGACCCAGCAGTTCGAGGGCTTGGGCAATTACTCTTTTCATCACTTGCTGGTACATTTGATTGCTCAACCTTCAAAATTTACTAGTTTTGTTGTGCTTGACTTTAGTTTATCCTGTAGGAAGATTTTAAACCGCCTTCTTCCCTCATTAAGATTTAGGTTGATAGGCCTAAACCTAAATCCCTATATTATCTCATGAAATGGTAAAGGAAACCAACACATCACGCATTTGAGTATAACATAACGTTTTAGGCAAAGATCCTCGTTTGTTTAGACCACTTAGAGGCATCTGGGGCCCTACTGGCTCTTCAATGTGTTACATAAATGGCCAAATTATAATCTGATTTCAAATGTTTACTTTATGTTACAAAAGATCATTTAACATGTTATAACTATGGAGAAACATGAATGAAGCTAATCGACTACTTGTAGAATTTGAGCTAGAGTTTGTTTCGACTGACACTGGTTATGATATGAGAGACATTTGTGTGTTTTTCAATGTCAGAGGATGAAAATCAAACTCAAAACTTTGTTTCTGGTGGATTGCATTGCATGGACATTTCAGGATATGTTTTGCCATTGCTGAGATCTGTCTGCTGGCCGCATCGGTGCGAAATGCCTATCACACCAAATATGTGAGTTCTCTGATGAATGAGCAAATTACATGCAAAATGCTAAGGAGGGGAGTGTTCGGGGCCGGGGCTGCTTTTATTGTCTTCACATGTTTAACATCAGAGCTGTTCTATGTTAGCTTTTCCAAGGCTCATGACCAGACTTCCTCCTTTGCCAAAGACACTGGCATTAGAATGGCAAACCTATAGAAGGTGAGGAGCTCATTTACTAGAATTGGGGGTTATAGGATTTTGTCAAACATGTGTGACTTGATGATGTGAAAAATGAACCACTGGGAGTGACAGATTACATGTTGAATGCAGATGTACAAATATGATTTGATAGGTGAGTGAAGATTTCATGTTGTGGTTTGTGGTATGTGCCTGTGTCAATGGCTATGTTCCTTTAGTATAACTAAGCTAATCCTTTTCGGTCTTTGTTACTATCGTCATGATCGTATCGACCACCCATCTGACTACCTCATTTTGCATATTAGATTGAACTCTCAATGGTATTTATAGATGTAAACTTTAGAGATCATGAAAGCTTACATCTGAAGTTAGTTAATCCTTTCTGTAACTTGGTGAGTTTGGAAATGTGAAATTTATCCTTGACTGTTACCAAATAAGAATGATGAAATTTTACCTTTTTCTAGAAAACAAGAGTCAAATTAGTCAGCAGGGAAACAAAGAAAAGTAAAGAAATATTAATACAACTCTACTACAATTTGGACTGTGTCATTGACAAATTTAGTCCATTTATTTTGTGCTCAAATTGTTGCCTTTTCTATTGGATTTGATATTTGGGCTCAAC

mRNA sequence

AATAAATAAGCTGCTCAAAGAAATGCCATCACTTTCCTTTCTTCTACCCGCGCCAAACAAAAAGCCGAAGTTATTGCAGAGCTCACGGCCCTTCGATTTTCCCATTCCTTCTTCTTCTTATAACCCTCTTCAACTAAAACCCATTTGCGAGCTGTTGCTGGATCTTTGAATCATGGGTATGATCGTTTTGATTATGGTGTTTATCTTTGATCTTGTTGCTTTTGCACTTGCTGTTGCTGCAGAGCAGAGAAGAACCACTGCCACGGTCGTTCAATCAGGCAATTCTAAATTCTGTGCCTATGATTCTGATATTGCAACTGGATTAGGTGTGGGTTCACTTCTGGTCCTATTTGCTAGCCAAGTGATTGTAATGGTGGCAAGTCGATGCTTATGCTGTGGGAGAGCCTTGCGACCCAGCAGTTCGAGGGCTTGGGCAATTACTCTTTTCATCACTTGCTGGATATGTTTTGCCATTGCTGAGATCTGTCTGCTGGCCGCATCGGTGCGAAATGCCTATCACACCAAATATGTGAGTTCTCTGATGAATGAGCAAATTACATGCAAAATGCTAAGGAGGGGAGTGTTCGGGGCCGGGGCTGCTTTTATTGTCTTCACATGTTTAACATCAGAGCTGTTCTATGTTAGCTTTTCCAAGGCTCATGACCAGACTTCCTCCTTTGCCAAAGACACTGGCATTAGAATGGCAAACCTATAGAAGGTGAGGAGCTCATTTACTAGAATTGGGGGTTATAGGATTTTGTCAAACATGTGTGACTTGATGATGTGAAAAATGAACCACTGGGAGTGACAGATTACATGTTGAATGCAGATGTACAAATATGATTTGATAGGTGAGTGAAGATTTCATGTTGTGGTTTGTGGTATGTGCCTGTGTCAATGGCTATGTTCCTTTAGTATAACTAAGCTAATCCTTTTCGGTCTTTGTTACTATCGTCATGATCGTATCGACCACCCATCTGACTACCTCATTTTGCATATTAGATTGAACTCTCAATGGTATTTATAGATGTAAACTTTAGAGATCATGAAAGCTTACATCTGAAGTTAGTTAATCCTTTCTGTAACTTGGTGAGTTTGGAAATGTGAAATTTATCCTTGACTGTTACCAAATAAGAATGATGAAATTTTACCTTTTTCTAGAAAACAAGAGTCAAATTAGTCAGCAGGGAAACAAAGAAAAGTAAAGAAATATTAATACAACTCTACTACAATTTGGACTGTGTCATTGACAAATTTAGTCCATTTATTTTGTGCTCAAATTGTTGCCTTTTCTATTGGATTTGATATTTGGGCTCAAC

Coding sequence (CDS)

ATGGGTATGATCGTTTTGATTATGGTGTTTATCTTTGATCTTGTTGCTTTTGCACTTGCTGTTGCTGCAGAGCAGAGAAGAACCACTGCCACGGTCGTTCAATCAGGCAATTCTAAATTCTGTGCCTATGATTCTGATATTGCAACTGGATTAGGTGTGGGTTCACTTCTGGTCCTATTTGCTAGCCAAGTGATTGTAATGGTGGCAAGTCGATGCTTATGCTGTGGGAGAGCCTTGCGACCCAGCAGTTCGAGGGCTTGGGCAATTACTCTTTTCATCACTTGCTGGATATGTTTTGCCATTGCTGAGATCTGTCTGCTGGCCGCATCGGTGCGAAATGCCTATCACACCAAATATGTGAGTTCTCTGATGAATGAGCAAATTACATGCAAAATGCTAAGGAGGGGAGTGTTCGGGGCCGGGGCTGCTTTTATTGTCTTCACATGTTTAACATCAGAGCTGTTCTATGTTAGCTTTTCCAAGGCTCATGACCAGACTTCCTCCTTTGCCAAAGACACTGGCATTAGAATGGCAAACCTATAG

Protein sequence

MGMIVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLFASQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYVSSLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSSFAKDTGIRMANL
Homology
BLAST of Clc03G06160 vs. NCBI nr
Match: XP_038905949.1 (uncharacterized protein LOC120091872 [Benincasa hispida] >XP_038905950.1 uncharacterized protein LOC120091872 [Benincasa hispida])

HSP 1 Score: 322.0 bits (824), Expect = 3.2e-84
Identity = 167/180 (92.78%), Postives = 173/180 (96.11%), Query Frame = 0

Query: 1   MGMIVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGM+VLI+VFIFDLVAFALAVAAEQRRTTATVVQSG SKFCAYDSD+ATGLGVGSLL+LF
Sbjct: 2   MGMLVLIVVFIFDLVAFALAVAAEQRRTTATVVQSGTSKFCAYDSDVATGLGVGSLLILF 61

Query: 61  ASQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVIVMVASRCLCCGR LRP  SRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV
Sbjct: 62  ASQVIVMVASRCLCCGRGLRPGGSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 121

Query: 121 SSLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSSFAKDTGIRMANL 180
           SSLMNEQI+CKMLRRGVFGAGAAFIVFTC  SELFYVSFSKAH QTSSFAKDTGIRMA+L
Sbjct: 122 SSLMNEQISCKMLRRGVFGAGAAFIVFTCAASELFYVSFSKAHIQTSSFAKDTGIRMASL 181

BLAST of Clc03G06160 vs. NCBI nr
Match: XP_022954617.1 (uncharacterized protein LOC111456828 [Cucurbita moschata] >XP_022954618.1 uncharacterized protein LOC111456828 [Cucurbita moschata])

HSP 1 Score: 319.3 bits (817), Expect = 2.1e-83
Identity = 161/180 (89.44%), Postives = 176/180 (97.78%), Query Frame = 0

Query: 1   MGMIVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGM+V+++VF+ DLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVIVMVASRCLCCG+ALRPS SRAWAITLFITCW+CF IAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLIAEICLLAASVRNAYHTKYV 120

Query: 121 SSLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSSFAKDTGIRMANL 180
           SS+MNE+I+CKMLRRGVFGAGAAFIVFTC+ SELFY+SFSKAH+QTSSFAKDTGIRMA++
Sbjct: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180

BLAST of Clc03G06160 vs. NCBI nr
Match: KAG6573252.1 (hypothetical protein SDJN03_27139, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012419.1 hypothetical protein SDJN02_25171 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 319.3 bits (817), Expect = 2.1e-83
Identity = 161/180 (89.44%), Postives = 176/180 (97.78%), Query Frame = 0

Query: 1   MGMIVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGM+V+++VF+ DLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVIVMVASRCLCCG+ALRPS SRAWAITLFITCW+CF IAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFIIAEICLLAASVRNAYHTKYV 120

Query: 121 SSLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSSFAKDTGIRMANL 180
           SS+MNE+I+CKMLRRGVFGAGAAFIVFTC+ SELFY+SFSKAH+QTSSFAKDTGIRMA++
Sbjct: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180

BLAST of Clc03G06160 vs. NCBI nr
Match: XP_023542784.1 (uncharacterized protein LOC111802591 [Cucurbita pepo subsp. pepo] >XP_023542785.1 uncharacterized protein LOC111802591 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 318.2 bits (814), Expect = 4.7e-83
Identity = 160/180 (88.89%), Postives = 176/180 (97.78%), Query Frame = 0

Query: 1   MGMIVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGM+V+++VF+ DLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120
           A+QVIVMVASRCLCCG+ALRPS SRAWAITLFITCW+CF IAEICLLAASVRNAYHTKYV
Sbjct: 61  ATQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLIAEICLLAASVRNAYHTKYV 120

Query: 121 SSLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSSFAKDTGIRMANL 180
           SS+MNE+I+CKMLRRGVFGAGAAFIVFTC+ SELFY+SFSKAH+QTSSFAKDTGIRMA++
Sbjct: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180

BLAST of Clc03G06160 vs. NCBI nr
Match: XP_008442281.1 (PREDICTED: uncharacterized protein LOC103486188 [Cucumis melo] >XP_016901058.1 PREDICTED: uncharacterized protein LOC103486188 [Cucumis melo] >KAA0056971.1 DnaJ subfamily C member 22 [Cucumis melo var. makuwa] >TYK26397.1 DnaJ subfamily C member 22 [Cucumis melo var. makuwa])

HSP 1 Score: 317.0 bits (811), Expect = 1.0e-82
Identity = 162/180 (90.00%), Postives = 173/180 (96.11%), Query Frame = 0

Query: 1   MGMIVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGM+VLI+VFIFDLVAFALAVAAEQRRTTATV QSGNS+FCAYDSDIATGLGVGS L+LF
Sbjct: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTATVAQSGNSRFCAYDSDIATGLGVGSFLILF 60

Query: 61  ASQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVI+MVASRCLCCGR LRP  SRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120

Query: 121 SSLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSSFAKDTGIRMANL 180
           SS+MNEQI+CKMLRRGVFGAGAAFIVFTC+ SELFYVSFSKAH +T+SFAKDTGIRMA+L
Sbjct: 121 SSIMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHIETNSFAKDTGIRMASL 180

BLAST of Clc03G06160 vs. ExPASy TrEMBL
Match: A0A6J1GRF5 (uncharacterized protein LOC111456828 OS=Cucurbita moschata OX=3662 GN=LOC111456828 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.0e-83
Identity = 161/180 (89.44%), Postives = 176/180 (97.78%), Query Frame = 0

Query: 1   MGMIVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGM+V+++VF+ DLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVIVMVASRCLCCG+ALRPS SRAWAITLFITCW+CF IAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVIVMVASRCLCCGKALRPSGSRAWAITLFITCWVCFLIAEICLLAASVRNAYHTKYV 120

Query: 121 SSLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSSFAKDTGIRMANL 180
           SS+MNE+I+CKMLRRGVFGAGAAFIVFTC+ SELFY+SFSKAH+QTSSFAKDTGIRMA++
Sbjct: 121 SSIMNERISCKMLRRGVFGAGAAFIVFTCVASELFYISFSKAHNQTSSFAKDTGIRMASI 180

BLAST of Clc03G06160 vs. ExPASy TrEMBL
Match: A0A1S3B5C0 (uncharacterized protein LOC103486188 OS=Cucumis melo OX=3656 GN=LOC103486188 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.1e-83
Identity = 162/180 (90.00%), Postives = 173/180 (96.11%), Query Frame = 0

Query: 1   MGMIVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGM+VLI+VFIFDLVAFALAVAAEQRRTTATV QSGNS+FCAYDSDIATGLGVGS L+LF
Sbjct: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTATVAQSGNSRFCAYDSDIATGLGVGSFLILF 60

Query: 61  ASQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVI+MVASRCLCCGR LRP  SRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120

Query: 121 SSLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSSFAKDTGIRMANL 180
           SS+MNEQI+CKMLRRGVFGAGAAFIVFTC+ SELFYVSFSKAH +T+SFAKDTGIRMA+L
Sbjct: 121 SSIMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHIETNSFAKDTGIRMASL 180

BLAST of Clc03G06160 vs. ExPASy TrEMBL
Match: A0A5A7UTY8 (DnaJ subfamily C member 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00600 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 5.1e-83
Identity = 162/180 (90.00%), Postives = 173/180 (96.11%), Query Frame = 0

Query: 1   MGMIVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGM+VLI+VFIFDLVAFALAVAAEQRRTTATV QSGNS+FCAYDSDIATGLGVGS L+LF
Sbjct: 1   MGMLVLIVVFIFDLVAFALAVAAEQRRTTATVAQSGNSRFCAYDSDIATGLGVGSFLILF 60

Query: 61  ASQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVI+MVASRCLCCGR LRP  SRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVILMVASRCLCCGRGLRPGGSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120

Query: 121 SSLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSSFAKDTGIRMANL 180
           SS+MNEQI+CKMLRRGVFGAGAAFIVFTC+ SELFYVSFSKAH +T+SFAKDTGIRMA+L
Sbjct: 121 SSIMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHIETNSFAKDTGIRMASL 180

BLAST of Clc03G06160 vs. ExPASy TrEMBL
Match: A0A6J1CEZ1 (uncharacterized protein LOC111010632 OS=Momordica charantia OX=3673 GN=LOC111010632 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.3e-82
Identity = 156/180 (86.67%), Postives = 173/180 (96.11%), Query Frame = 0

Query: 1   MGMIVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           M M+VL++VF+FDLVAFALAVAAEQRRTTA VVQSGN++FCAYDSDIATGLGVGSLL LF
Sbjct: 1   MAMLVLVVVFVFDLVAFALAVAAEQRRTTAAVVQSGNTRFCAYDSDIATGLGVGSLLFLF 60

Query: 61  ASQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVI+MVASRCLCCG++LRPS SRAWA+TLFITCW+CF IAE CLLAASVRNAYHTKY+
Sbjct: 61  ASQVIIMVASRCLCCGKSLRPSGSRAWAVTLFITCWVCFLIAETCLLAASVRNAYHTKYM 120

Query: 121 SSLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSSFAKDTGIRMANL 180
           SS++NEQI+CKMLR+GVFGAGAAFIVFTC+ SELFYVSFSKAHDQTSSFAKDTGIRMANL
Sbjct: 121 SSIVNEQISCKMLRKGVFGAGAAFIVFTCVASELFYVSFSKAHDQTSSFAKDTGIRMANL 180

BLAST of Clc03G06160 vs. ExPASy TrEMBL
Match: A0A6J1K1A5 (uncharacterized protein LOC111490189 OS=Cucurbita maxima OX=3661 GN=LOC111490189 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.5e-82
Identity = 159/180 (88.33%), Postives = 174/180 (96.67%), Query Frame = 0

Query: 1   MGMIVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSKFCAYDSDIATGLGVGSLLVLF 60
           MGM+V+++VF+ DLVAFALAVAAEQRRTTATVV SGNSKFCAYDSDIATGLGVGSLLVLF
Sbjct: 1   MGMLVVVVVFVLDLVAFALAVAAEQRRTTATVVTSGNSKFCAYDSDIATGLGVGSLLVLF 60

Query: 61  ASQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYV 120
           ASQVIVMVASRCLC G+ALRPS SRAWAITLFITCW+CF IAEICLLAASVRNAYHTKYV
Sbjct: 61  ASQVIVMVASRCLCFGKALRPSGSRAWAITLFITCWVCFLIAEICLLAASVRNAYHTKYV 120

Query: 121 SSLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSSFAKDTGIRMANL 180
           SS+MNE+I+CKMLRRG+FGAGAAFIVFTC+ SELFYVSFSKAH+QTSSFAKDTGIRMA++
Sbjct: 121 SSIMNERISCKMLRRGIFGAGAAFIVFTCVASELFYVSFSKAHNQTSSFAKDTGIRMASM 180

BLAST of Clc03G06160 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 209.5 bits (532), Expect = 2.2e-54
Identity = 112/179 (62.57%), Postives = 140/179 (78.21%), Query Frame = 0

Query: 3   MIVLIMVFIFDLVAFALAVAAEQRRTTATVV-QSGNSKFCAYDSDIATGLGVGSLLVLFA 62
           +++L++VF+FDL+AF LAVAAEQRRTT  +  +S +  +C YD DIATGLGVGS LVL A
Sbjct: 4   VLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRESRDLSYCVYDKDIATGLGVGSFLVLLA 63

Query: 63  SQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYVS 122
           SQ+++MVASRCLCCGRAL PS SR+WAI LFIT W+ F IA++CLLA SVRNAYHTKY  
Sbjct: 64  SQLLIMVASRCLCCGRALTPSGSRSWAIFLFITTWVFFFIAQVCLLAGSVRNAYHTKYRV 123

Query: 123 SLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSSFAKDTGIRMANL 181
              N   +C+ LR+GVFGAGAAFIV T + SEL+YV+ S+A D   S  +D GIRM++L
Sbjct: 124 YFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRAKDFQPS--RDPGIRMSSL 180

BLAST of Clc03G06160 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-43
Identity = 88/164 (53.66%), Postives = 119/164 (72.56%), Query Frame = 0

Query: 4   IVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSKF--CAYDSDIATGLGVGSLLVLFA 63
           +V+I+VFI DL+A  LA+AAEQRR+   VV  G  +F  C Y SDIAT  G G+ ++LF 
Sbjct: 5   LVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLLFI 64

Query: 64  SQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYVS 123
           SQVI+MVASRC CCG+AL+P  SRA  I LF+ CW+ F IAE+CLLA S+RNAYHT Y  
Sbjct: 65  SQVIIMVASRCFCCGKALKPGGSRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTTYRR 124

Query: 124 SL-MNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHD 165
              +    +C+++R+GVF AGA+F +FT + S+ +Y+S+S+A D
Sbjct: 125 MWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARD 168

BLAST of Clc03G06160 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-41
Identity = 84/164 (51.22%), Postives = 119/164 (72.56%), Query Frame = 0

Query: 4   IVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSK--FCAYDSDIATGLGVGSLLVLFA 63
           +V+I+VFI DL+A  LA+AAEQRR+   V    + +  +C Y +DIAT  G G+ ++LF 
Sbjct: 5   LVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLLFV 64

Query: 64  SQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYVS 123
           SQV++M ASRC CCG++L P  SRA AI LF+ CW+ F IAE+CLLAAS+RNAYHT+Y  
Sbjct: 65  SQVLIMAASRCFCCGKSLNPGGSRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQYRK 124

Query: 124 S-LMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHD 165
              + +  +C+++R+GVF AGAAF +FT + S+ +YV +S+A D
Sbjct: 125 MWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRARD 168

BLAST of Clc03G06160 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 166.8 bits (421), Expect = 1.6e-41
Identity = 88/167 (52.69%), Postives = 116/167 (69.46%), Query Frame = 0

Query: 4   IVLIMVFIFDLVAFALAVAAEQRRTTATVVQSGNSK--FCAYDSDIATGLGVGSLLVLFA 63
           IV  +VF+F+L+AF LAVAAEQRR+TA VVQ    +  +C YDSD ATG GVG+ L   A
Sbjct: 5   IVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFSVA 64

Query: 64  SQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYVS 123
           SQ+++M+ SRC CCG+ L+P  SRA A+ LFI  W+ F IAEICLLA SV NAYHTKY +
Sbjct: 65  SQILIMLVSRCFCCGKPLKPGGSRALALILFIVSWMFFLIAEICLLAGSVENAYHTKYRT 124

Query: 124 SLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKAHDQTSS 169
             M+    C+ LR+GVF AGA+F+ F  + S+ +Y  +  A + + S
Sbjct: 125 MFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYYFFYFSAAEASLS 171

BLAST of Clc03G06160 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 142.1 bits (357), Expect = 4.3e-34
Identity = 73/161 (45.34%), Postives = 109/161 (67.70%), Query Frame = 0

Query: 4   IVLIMVFIFDLVAFALAVAAEQRRTTATVVQS--GNSKFCAYDSDIATGLGVGSLLVLFA 63
           +V I+V    LVAF  ++AAE+RR+    +Q    N+ FC YDSD+ATG GVG+ L L +
Sbjct: 9   LVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFLLS 68

Query: 64  SQVIVMVASRCLCCGRALRPSSSRAWAITLFITCWICFAIAEICLLAASVRNAYHTKYVS 123
           S+ ++M  ++C+C GR L P S RAW+I  FI+ W+ F +AE C++A + +NAYHTKY+S
Sbjct: 69  SESLLMSVTKCMCFGRPLAPGSDRAWSIIYFISSWMTFLVAEACVIAGATKNAYHTKYLS 128

Query: 124 SLMNEQITCKMLRRGVFGAGAAFIVFTCLTSELFYVSFSKA 163
           S   +  +C  LR+G+F AGA FIV T + +  +Y+ F+K+
Sbjct: 129 S---QTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKS 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038905949.13.2e-8492.78uncharacterized protein LOC120091872 [Benincasa hispida] >XP_038905950.1 unchara... [more]
XP_022954617.12.1e-8389.44uncharacterized protein LOC111456828 [Cucurbita moschata] >XP_022954618.1 unchar... [more]
KAG6573252.12.1e-8389.44hypothetical protein SDJN03_27139, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023542784.14.7e-8388.89uncharacterized protein LOC111802591 [Cucurbita pepo subsp. pepo] >XP_023542785.... [more]
XP_008442281.11.0e-8290.00PREDICTED: uncharacterized protein LOC103486188 [Cucumis melo] >XP_016901058.1 P... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GRF51.0e-8389.44uncharacterized protein LOC111456828 OS=Cucurbita moschata OX=3662 GN=LOC1114568... [more]
A0A1S3B5C05.1e-8390.00uncharacterized protein LOC103486188 OS=Cucumis melo OX=3656 GN=LOC103486188 PE=... [more]
A0A5A7UTY85.1e-8390.00DnaJ subfamily C member 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A6J1CEZ17.3e-8286.67uncharacterized protein LOC111010632 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1K1A59.5e-8288.33uncharacterized protein LOC111490189 OS=Cucurbita maxima OX=3661 GN=LOC111490189... [more]
Match NameE-valueIdentityDescription
AT1G61065.12.2e-5462.57Protein of unknown function (DUF1218) [more]
AT1G52910.11.0e-4353.66Protein of unknown function (DUF1218) [more]
AT3G15480.11.6e-4151.22Protein of unknown function (DUF1218) [more]
AT4G27435.11.6e-4152.69Protein of unknown function (DUF1218) [more]
AT1G13380.14.3e-3445.34Protein of unknown function (DUF1218) [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009606Modifying wall lignin-1/2PFAMPF06749DUF1218coord: 56..149
e-value: 9.1E-25
score: 87.0
NoneNo IPR availablePANTHERPTHR31769OS07G0462200 PROTEIN-RELATEDcoord: 3..180
NoneNo IPR availablePANTHERPTHR31769:SF161,3-BETA-GLUCAN SYNTHASE COMPONENT (DUF1218)coord: 3..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc03G06160.1Clc03G06160.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane