Clc03G05490 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G05490
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Exopolygalacturonase-like
Location	ClcChr03: 5167077 .. 5168944 (+)
RNA-Seq Expression	Clc03G05490
Synteny	Clc03G05490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATTTTCTCCTTCTATATAAACAGTCATATGAAACGAAATTTAAAACATTCCTACCAATCGTTTCTAAGTTAGAATTTGAACGAAGAGAAAACAAGCAAAGTAGAAACGAGGAAAAGAATGAGATTGAGATCAAACATTGTGGCATTATTTCCACTATTGTTATTGTTGGTGTCTAATACTAAAGGTCAATCAGGCGGTGGCCTTTTCGATGTCACAAAGTACGGTGCCAAACCTAATGAAGATATTACTACGGTAAGTGTGCATTTAGTTTGCTAAACAATTTTAATTTATACAAAACAATTTTATCAAATGAAATGACTTAATTTATAGGCTTTGGCAAGTGCATGGAGTGAGGCATGTGCGTCTACCACTTCAAGTAAAGTGTTGATTCCAAAAGGAACTTACCAATTAACTCAATCCAACCTTAAAGGCCCTTGCAAAAGCCCTATTGAGGTTCAAATTGAAGGAACATTACAAGCACCGGCCCAACCAAAAGGAGATGGGTTGATCATTTTAGAATATGTTGATCAATTAACGTTATCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAACAGGTTGGGAAAAGAATGATTGCCATCTTAAGAAAATATGCGCCAAACTTCCTATGGTAAATGTGTGCTTTAATCATAATGGCTTTTTGTTTTTGGTCAATATCTTACCTAATTTAAGCACCACATATTTTCTCAATCATTATATATGTGTTGATACAAGGGCTTTTTTCTTTTTTTTTTTTCTTTTCTTTTTTGAATGAGCAGAATTTGAAGTTTAATTTCATCACTAATTCATTAGTGAAGGACATAACTTCATTGGATAGCAAGAATTTTCATATCAACCTTTTGGGGTGCAAGAATCTTACCTTTGACCACGTGACAATTACTGCACCAGATAATAGTCCCAACACCGATGGAATTCACTTGAGTAGTTCAGAAGCAATTAACATTCTCAATACCAAAATTGCAACCGGAGATGATTGTATATCTGTGGGAGACAGTAACAAACAAATAGCTATTAGTGATGTTACTTGTGGACCGGGACATGGAATTAGCGTTGGAAGTTTGGGTAAATATAGCAAGGAACAAGCTGTGGAAGGAATTACAGTGAAAAAATGCAAATTGATCAATACGTCGAATGGTGTCAGGATCAAAACATGGCCAGATTCTGTCGGCTCATTTCCAGCCACTGACATGCATTTTGAAGACATTGAAATGGTTAACGTTAGCTTTCCTATCATCATAGACCAAGAATATTGCCCATGGAACCAGTGCAACCGAAAGGTATGTACTGAAATTAGACCTCATTAATTTTAAATTATCATTTAACTTGAAAAACAATATTTGTGAAAAGTTCAATCTTTGATATATATATTTCAATAATGTTTTGTTTAATGTTTAGGTCGCATCAAAAATTAAGATCAGCAAAGTTAGTTTCAAGAACATTAAAGGCACCTCAGCAACTCCTGTTGCAGTCAAACTTCTTTGCAGTAAGAGTTTACCATGTGAGGATGTGGAAGTTGCTAATATTGACCTCACTTATAGTGGAAACCAAGGTCCAATTATATCTCAATGTTTGAATGTGAACCCCATCGTTTCTGGAGTCCAAAACCCTCGCATCTGTGCCGAACCTGTGCCCGTCGATTCTCCATCAACTGACTGAATAGTTTTTAGATGCAACAAATGTTCCAAACCATTTGTAATTCATTTTTTCCATAGCATTTCACTTCATTCCATGCATGCTGTGTTCAGTTGCATGCTCTTAATAATTGTATTTTTGTTTCCTTTTTAAAGAAAAATAATATCTCTCCAGTCTCGGCTAGGATCGGAGGCTTTCTTGGTGGTTTACAGC

mRNA sequence

ATAATTTTCTCCTTCTATATAAACAGTCATATGAAACGAAATTTAAAACATTCCTACCAATCGTTTCTAAGTTAGAATTTGAACGAAGAGAAAACAAGCAAAGTAGAAACGAGGAAAAGAATGAGATTGAGATCAAACATTGTGGCATTATTTCCACTATTGTTATTGTTGGTGTCTAATACTAAAGGTCAATCAGGCGGTGGCCTTTTCGATGTCACAAAGTACGGTGCCAAACCTAATGAAGATATTACTACGGCTTTGGCAAGTGCATGGAGTGAGGCATGTGCGTCTACCACTTCAAGTAAAGTGTTGATTCCAAAAGGAACTTACCAATTAACTCAATCCAACCTTAAAGGCCCTTGCAAAAGCCCTATTGAGGTTCAAATTGAAGGAACATTACAAGCACCGGCCCAACCAAAAGGAGATGGGTTGATCATTTTAGAATATGTTGATCAATTAACGTTATCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAACAGGTTGGGAAAAGAATGATTGCCATCTTAAGAAAATATGCGCCAAACTTCCTATGAATTTGAAGTTTAATTTCATCACTAATTCATTAGTGAAGGACATAACTTCATTGGATAGCAAGAATTTTCATATCAACCTTTTGGGGTGCAAGAATCTTACCTTTGACCACGTGACAATTACTGCACCAGATAATAGTCCCAACACCGATGGAATTCACTTGAGTAGTTCAGAAGCAATTAACATTCTCAATACCAAAATTGCAACCGGAGATGATTGTATATCTGTGGGAGACAGTAACAAACAAATAGCTATTAGTGATGTTACTTGTGGACCGGGACATGGAATTAGCGTTGGAAGTTTGGGTAAATATAGCAAGGAACAAGCTGTGGAAGGAATTACAGTGAAAAAATGCAAATTGATCAATACGTCGAATGGTGTCAGGATCAAAACATGGCCAGATTCTGTCGGCTCATTTCCAGCCACTGACATGCATTTTGAAGACATTGAAATGGTTAACGTTAGCTTTCCTATCATCATAGACCAAGAATATTGCCCATGGAACCAGTGCAACCGAAAGGTCGCATCAAAAATTAAGATCAGCAAAGTTAGTTTCAAGAACATTAAAGGCACCTCAGCAACTCCTGTTGCAGTCAAACTTCTTTGCAGTAAGAGTTTACCATGTGAGGATGTGGAAGTTGCTAATATTGACCTCACTTATAGTGGAAACCAAGGTCCAATTATATCTCAATGTTTGAATGTGAACCCCATCGTTTCTGGAGTCCAAAACCCTCGCATCTGTGCCGAACCTGTGCCCGTCGATTCTCCATCAACTGACTGAATAGTTTTTAGATGCAACAAATGTTCCAAACCATTTGTAATTCATTTTTTCCATAGCATTTCACTTCATTCCATGCATGCTGTGTTCAGTTGCATGCTCTTAATAATTGTATTTTTGTTTCCTTTTTAAAGAAAAATAATATCTCTCCAGTCTCGGCTAGGATCGGAGGCTTTCTTGGTGGTTTACAGC

Coding sequence (CDS)

ATGAGATTGAGATCAAACATTGTGGCATTATTTCCACTATTGTTATTGTTGGTGTCTAATACTAAAGGTCAATCAGGCGGTGGCCTTTTCGATGTCACAAAGTACGGTGCCAAACCTAATGAAGATATTACTACGGCTTTGGCAAGTGCATGGAGTGAGGCATGTGCGTCTACCACTTCAAGTAAAGTGTTGATTCCAAAAGGAACTTACCAATTAACTCAATCCAACCTTAAAGGCCCTTGCAAAAGCCCTATTGAGGTTCAAATTGAAGGAACATTACAAGCACCGGCCCAACCAAAAGGAGATGGGTTGATCATTTTAGAATATGTTGATCAATTAACGTTATCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAACAGGTTGGGAAAAGAATGATTGCCATCTTAAGAAAATATGCGCCAAACTTCCTATGAATTTGAAGTTTAATTTCATCACTAATTCATTAGTGAAGGACATAACTTCATTGGATAGCAAGAATTTTCATATCAACCTTTTGGGGTGCAAGAATCTTACCTTTGACCACGTGACAATTACTGCACCAGATAATAGTCCCAACACCGATGGAATTCACTTGAGTAGTTCAGAAGCAATTAACATTCTCAATACCAAAATTGCAACCGGAGATGATTGTATATCTGTGGGAGACAGTAACAAACAAATAGCTATTAGTGATGTTACTTGTGGACCGGGACATGGAATTAGCGTTGGAAGTTTGGGTAAATATAGCAAGGAACAAGCTGTGGAAGGAATTACAGTGAAAAAATGCAAATTGATCAATACGTCGAATGGTGTCAGGATCAAAACATGGCCAGATTCTGTCGGCTCATTTCCAGCCACTGACATGCATTTTGAAGACATTGAAATGGTTAACGTTAGCTTTCCTATCATCATAGACCAAGAATATTGCCCATGGAACCAGTGCAACCGAAAGGTCGCATCAAAAATTAAGATCAGCAAAGTTAGTTTCAAGAACATTAAAGGCACCTCAGCAACTCCTGTTGCAGTCAAACTTCTTTGCAGTAAGAGTTTACCATGTGAGGATGTGGAAGTTGCTAATATTGACCTCACTTATAGTGGAAACCAAGGTCCAATTATATCTCAATGTTTGAATGTGAACCCCATCGTTTCTGGAGTCCAAAACCCTCGCATCTGTGCCGAACCTGTGCCCGTCGATTCTCCATCAACTGACTGA

Protein sequence

MRLRSNIVALFPLLLLLVSNTKGQSGGGLFDVTKYGAKPNEDITTALASAWSEACASTTSSKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQPKGDGLIILEYVDQLTLSGTGVLDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTFDHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHGISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVSFPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVANIDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPSTD

Homology

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BLAST of Clc03G05490 vs. NCBI nr
Match: XP_038895545.1 (exopolygalacturonase-like [Benincasa hispida])

HSP 1 Score: 715.3 bits (1845), Expect = 3.0e-202
Identity = 352/404 (87.13%), Postives = 373/404 (92.33%), Query Frame = 0


Query: 1   MRLRSNIVALFPLLLLLVSNTKGQSGGGLFDVTKYGAKPNEDITTALASAWSEACASTTS 60
           M LRSN +AL PLLLLLVSN K QS  G+FDVT +GAKPN DIT ALA AW  ACASTT 
Sbjct: 4   MGLRSNFLALVPLLLLLVSNAKSQS-SGIFDVTTFGAKPNVDITAALAIAWKTACASTTP 63

Query: 61  SKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQPKGDGLIILEYVDQLTLSGTGV 120
           SKVLIPK +Y+L+QSNL GPCKS IE QIEGTLQAPA PKGDGL+ILEYVDQLT+SGTGV
Sbjct: 64  SKVLIPKESYKLSQSNLNGPCKSSIEFQIEGTLQAPADPKGDGLLILEYVDQLTMSGTGV 123

Query: 121 LDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTF 180
           LDGQGKTGWEKNDCHLKKIC KLPMNLKFNFITNS+VKDITSLDSKN+HINLLGCKNLT 
Sbjct: 124 LDGQGKTGWEKNDCHLKKICTKLPMNLKFNFITNSIVKDITSLDSKNYHINLLGCKNLTI 183

Query: 181 DHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHG 240
           DHVTITAPDNSPNTDGIH+SSSE INILNTKI TGDDCISVGDSNKQIAISDVTCGPGHG
Sbjct: 184 DHVTITAPDNSPNTDGIHVSSSEGINILNTKIETGDDCISVGDSNKQIAISDVTCGPGHG 243

Query: 241 ISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVS 300
           IS+GSLGKYSKEQAVEG+TVKKCKLINTSNGVRIKTWPDSVG+FPA DMHFEDIEMVNVS
Sbjct: 244 ISIGSLGKYSKEQAVEGVTVKKCKLINTSNGVRIKTWPDSVGAFPAIDMHFEDIEMVNVS 303

Query: 301 FPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVAN 360
            PIIIDQEYCPWNQCNRKV SKIKISKVSFKNIKGTSATPVAVKL+CSKS+PCE VEVA+
Sbjct: 304 NPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIKGTSATPVAVKLVCSKSVPCEGVEVAD 363

Query: 361 IDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPSTD 405
           IDL+YSG+QGPI SQC NVNPIVSG QNPRICAEP P+D+PSTD
Sbjct: 364 IDLSYSGSQGPITSQCANVNPIVSGKQNPRICAEPAPIDAPSTD 406

[Close]

BLAST of Clc03G05490 vs. NCBI nr
Match: KAA0045608.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02648.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 682.2 bits (1759), Expect = 2.8e-192
Identity = 327/404 (80.94%), Postives = 362/404 (89.60%), Query Frame = 0


Query: 1   MRLRSNIVALFPLLLLLVSNTKGQSGGGLFDVTKYGAKPNEDITTALASAWSEACASTTS 60
           M L SN V L P+LLLLVSN+K QS GG+FD+TKYGAKPN D+T ALASAW EACASTT 
Sbjct: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60

Query: 61  SKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQPKGDGLIILEYVDQLTLSGTGV 120
           SKVLIPKG+Y L+QSNLKGPCKS IE+QIEGTLQAPA PKGDGL++LEYVDQLT+SGTGV
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLLLLEYVDQLTVSGTGV 120

Query: 121 LDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTF 180
           LDGQGK GWEKNDCHLKK C KLPMNLK NF+TNS+VKDITSLDSKN+HINLLGCKNLTF
Sbjct: 121 LDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDSKNYHINLLGCKNLTF 180

Query: 181 DHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHG 240
           DHVTITAP NSPNTDGIH+SSSE INILNT IATGDDCISVGD+NKQ+ ISDVTCGPGHG
Sbjct: 181 DHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHG 240

Query: 241 ISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVS 300
           IS+GSLGKYSKE+ V G+TVKKCKL +T+NGVRIKTWPDS  +FPA+DMHFEDIEMVNVS
Sbjct: 241 ISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVS 300

Query: 301 FPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVAN 360
            P+IIDQEYCPWNQCNRKV SKIKIS VSFKNI+GTSATPVAVK++CS+S PCE VEVA+
Sbjct: 301 NPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKIVCSQSNPCEGVEVAD 360

Query: 361 IDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPSTD 405
           IDLTYSG++GPI SQC NV P++SG QNP IC EP P   PS+D
Sbjct: 361 IDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of Clc03G05490 vs. NCBI nr
Match: XP_011652893.2 (exopolygalacturonase [Cucumis sativus] >KGN64588.2 hypothetical protein Csa_014082 [Cucumis sativus])

HSP 1 Score: 681.8 bits (1758), Expect = 3.6e-192
Identity = 330/406 (81.28%), Postives = 363/406 (89.41%), Query Frame = 0


Query: 1   MRLRSNIVALFPLLLLLVSNTKGQS--GGGLFDVTKYGAKPNEDITTALASAWSEACAST 60
           M LRSN V L PL LLLVSN KGQS  GGG+FDVT +GAKPN DIT  L  AW +ACAST
Sbjct: 1   MGLRSNFVTLLPLFLLLVSNAKGQSAAGGGVFDVTSFGAKPNGDITGPLLVAWKDACAST 60

Query: 61  TSSKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQPKGDGLIILEYVDQLTLSGT 120
           T SKVLIPKG+Y L+QSNLKGPCKSPIE+QIEGTLQA   PKGDGL++LEY+DQLT+SGT
Sbjct: 61  TPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQASPDPKGDGLLLLEYIDQLTVSGT 120

Query: 121 GVLDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNL 180
           GVLDGQGK GWEKNDCHLKKIC KLPM LK NFITNS+VKDITSLDSKN+HINLLGCKNL
Sbjct: 121 GVLDGQGKAGWEKNDCHLKKICTKLPMTLKLNFITNSIVKDITSLDSKNYHINLLGCKNL 180

Query: 181 TFDHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPG 240
           T DHVTITAP+NSPNTDGIH+SSSE INILNT IATGDDCISVGD+NKQI ISDVTCGPG
Sbjct: 181 TIDHVTITAPENSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQIVISDVTCGPG 240

Query: 241 HGISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVN 300
           HGIS+GSLGKYSKE+ V G+TVKKCKL +T+NGVRIKTWPDSVG+FPATDMHFEDIEMVN
Sbjct: 241 HGISIGSLGKYSKEKEVVGVTVKKCKLTSTTNGVRIKTWPDSVGTFPATDMHFEDIEMVN 300

Query: 301 VSFPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEV 360
           VS PIIIDQEYCPWNQCNRKV SKIKISKVSFKNI+GTSAT VAVK++CS+S PCE+VEV
Sbjct: 301 VSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATAVAVKIVCSQSNPCEEVEV 360

Query: 361 ANIDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPSTD 405
           A+IDLTYSG++GPI SQC NV P+++G QNP IC EP P+D PSTD
Sbjct: 361 ADIDLTYSGSEGPIKSQCANVKPVITGKQNPPICGEPAPIDGPSTD 406

[Close]

BLAST of Clc03G05490 vs. NCBI nr
Match: XP_008441641.1 (PREDICTED: exopolygalacturonase-like [Cucumis melo] >KAA0056903.1 exopolygalacturonase-like [Cucumis melo var. makuwa] >TYJ99406.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 680.6 bits (1755), Expect = 8.1e-192
Identity = 329/404 (81.44%), Postives = 363/404 (89.85%), Query Frame = 0


Query: 1   MRLRSNIVALFPLLLLLVSNTKGQSGGGLFDVTKYGAKPNEDITTALASAWSEACASTTS 60
           M LRSN VAL  L LLLVSN+K QS G +FDVT +GAKP+ DIT AL SAW E CAS T 
Sbjct: 1   MGLRSNFVALLLLFLLLVSNSKAQSSGAVFDVTSFGAKPDADITGALVSAWKEGCASITP 60

Query: 61  SKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQPKGDGLIILEYVDQLTLSGTGV 120
           SKVLIPKG+Y L+QSNLKGPCKS IE+QIEGTLQAP+ PKGDGL+ILEYVD+LT+SG GV
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSSIELQIEGTLQAPSDPKGDGLLILEYVDRLTVSGMGV 120

Query: 121 LDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTF 180
           LDGQGK GWEKNDCHLKKIC KLPMNLK NFITNS+VKDITSLDSKN+HINLLGCKNLTF
Sbjct: 121 LDGQGKEGWEKNDCHLKKICTKLPMNLKLNFITNSIVKDITSLDSKNYHINLLGCKNLTF 180

Query: 181 DHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHG 240
           DHVTITAP +SPNTDGIH+SSSE INILNT IATGDDCISVGD+NKQI ISDVTCGPGHG
Sbjct: 181 DHVTITAPGDSPNTDGIHVSSSEEINILNTNIATGDDCISVGDTNKQIVISDVTCGPGHG 240

Query: 241 ISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVS 300
           IS+GSLGKYSKE+ V G+TVKKCKL +T+NGVRIKTWPDSVG+FPA+DMHFEDIEMVNVS
Sbjct: 241 ISIGSLGKYSKEKEVVGVTVKKCKLTSTTNGVRIKTWPDSVGTFPASDMHFEDIEMVNVS 300

Query: 301 FPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVAN 360
            P+IIDQEYCPWNQCNRKV SKIKISKVSFKNI+GTSATPVAVK++CSKS PCE+VEVA+
Sbjct: 301 NPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKIVCSKSNPCEEVEVAD 360

Query: 361 IDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPSTD 405
           IDLTYSG++GPI SQC NV P++SG QNP IC EP P+D PSTD
Sbjct: 361 IDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPLDGPSTD 404

[Close]

BLAST of Clc03G05490 vs. NCBI nr
Match: KAA0045594.1 (exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 680.6 bits (1755), Expect = 8.1e-192
Identity = 327/404 (80.94%), Postives = 362/404 (89.60%), Query Frame = 0


Query: 1   MRLRSNIVALFPLLLLLVSNTKGQSGGGLFDVTKYGAKPNEDITTALASAWSEACASTTS 60
           M L SN VAL  +LLLLVSN+K QS GG+FD+TKYGAKPN D+T ALASAW EACASTT 
Sbjct: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60

Query: 61  SKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQPKGDGLIILEYVDQLTLSGTGV 120
           SKVLIPKG+Y L+QSNLKGPCKS IE+QIEGTLQAPA PKGDGL++LEYVDQLT+SGTGV
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLLLLEYVDQLTVSGTGV 120

Query: 121 LDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTF 180
           LDGQGK GWEKNDCHLKK C KLPMNLK NF+TNS+VKDITSLDSKN+HINLLGCKNLTF
Sbjct: 121 LDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDSKNYHINLLGCKNLTF 180

Query: 181 DHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHG 240
           DHVTITAP NSPNTDGIH+SSSE INILNT IATGDDCISVGD+NKQ+ ISDVTCGPGHG
Sbjct: 181 DHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHG 240

Query: 241 ISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVS 300
           IS+GSLGKYSKE+ V G+TVKKCKL +T+NGVRIKTWPDS  +FPA+DMHFEDIEMVNVS
Sbjct: 241 ISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVS 300

Query: 301 FPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVAN 360
            P+IIDQEYCPWNQCNRKV SKIKIS VSFKNI+GTSATPVAVK++CS+S PCE VEVA+
Sbjct: 301 NPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKIVCSQSNPCEGVEVAD 360

Query: 361 IDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPSTD 405
           IDLTYSG++GPI SQC NV P++SG QNP IC EP P   PS+D
Sbjct: 361 IDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of Clc03G05490 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 4.5e-121
Identity = 212/376 (56.38%), Postives = 274/376 (72.87%), Query Frame = 0


Query: 28  GLFDVTKYGAKPNEDITTALASAWSEACASTTSSKVLIPKGTYQLTQSNLKGPCKSPIEV 87
           G+ D++K+G KPN DI  AL SAW+EACASTT++K++IP GTYQL    LKGPCK+PIE+
Sbjct: 23  GVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIPAGTYQLNGIELKGPCKAPIEL 82

Query: 88  QIEGTLQAPAQP---KG-DGLIILEYVDQLTLSGTGVLDGQGKTGWEK----NDCHLKKI 147
           Q++GT+QAPA P   KG +      Y+D LTLSG GV DGQG T ++K    +    K  
Sbjct: 83  QVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPASAWSGKNS 142

Query: 148 CAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTFDHVTITAPDNSPNTDGIHL 207
            +K+ MN  FNF+ NS+V+ +TS DSKNFH+ + GCKN+TFD  TITAP +SPNTDGIH+
Sbjct: 143 NSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHM 202

Query: 208 SSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHGISVGSLGKYSKEQAVEGIT 267
             S  + ILNT I TGDDC+S+GD +KQI +  V CGPGHG+SVGSLGK++ E+ VEGIT
Sbjct: 203 GKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGIT 262

Query: 268 VKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVSFPIIIDQEYCPWNQCNRKV 327
           VK C L  T NGVRIKTWPD+ G+   +D+HFEDI M NV  P+IIDQEY PWNQC++K 
Sbjct: 263 VKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKN 322

Query: 328 ASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVANIDLTYSGNQGPIISQCLNV 387
            SKIK+SK+SFKN+KGTS T   V L+CS ++PC+ VE+ N+DL ++G   P  ++C NV
Sbjct: 323 PSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNG--APTTAKCTNV 382

Query: 388 NPIVSGVQNPRICAEP 396
            P+V+G     +C  P
Sbjct: 383 KPLVTG--TAPVCQAP 394

[Close]

BLAST of Clc03G05490 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 1.0e-120
Identity = 214/405 (52.84%), Postives = 287/405 (70.86%), Query Frame = 0


Query: 6   NIV-ALFPLLLLLVSNTKGQSGGGLFD-VTKYGAKPN--EDITTALASAWSEACASTTSS 65
           NIV ++F LLLL +S +K QS    FD V K+GAK +   D++     AW EACAS T S
Sbjct: 6   NIVPSMFVLLLLFISASKVQSDA--FDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPS 65

Query: 66  KVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQP---KGDGLIILEYVDQLTLSGT 125
            V+IPKGTY L++ NL+GPCK+PIE+ ++GT+QAPA P   K    +    V+   + G 
Sbjct: 66  TVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGG 125

Query: 126 GVLDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNL 185
           G+ DGQG   +EKN C  ++  +KLP+N++F+F+TN+L++DITS DSK FHIN+  CKN+
Sbjct: 126 GIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFHINVFACKNI 185

Query: 186 TFDHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPG 245
           T + + I APD SPNTDGIH+  SE +NI+ + I TGDDCIS+GD  K + I ++TCGPG
Sbjct: 186 TLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPG 245

Query: 246 HGISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVN 305
           HGIS+GSLGK+  E+ VEGI +  C + NTSNG RIKTWP   G    +++HFEDI M N
Sbjct: 246 HGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGG-AVSEIHFEDITMNN 305

Query: 306 VSFPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEV 365
           VS PI+IDQ+YCPWN+C +   SK+K+S +SFKNI+GTSA P A+K +CS S PC++VE+
Sbjct: 306 VSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVEL 365

Query: 366 ANIDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPST 404
           A+ID+ ++G + P  SQCLNV PI SG  NP  C+ PVP    +T
Sbjct: 366 ADIDIKHNGAE-PATSQCLNVKPITSGKLNPIPCSGPVPKTPSAT 406

[Close]

BLAST of Clc03G05490 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.5e-119
Identity = 212/405 (52.35%), Postives = 285/405 (70.37%), Query Frame = 0


Query: 6   NIV-ALFPLLLLLVSNTKGQSGGGLFD-VTKYGAKPN--EDITTALASAWSEACASTTSS 65
           NIV ++F LLLL +S +K Q     FD V K+GAK +   D++     AW EACAS T S
Sbjct: 6   NIVPSMFVLLLLFISASKVQPDA--FDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPS 65

Query: 66  KVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQP---KGDGLIILEYVDQLTLSGT 125
            V+IPKGTY L++ NL+GPCK+PIE+ ++GT+QAPA P   K    +    V+   + G 
Sbjct: 66  TVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKMFGG 125

Query: 126 GVLDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNL 185
           G+ DGQG   +EKN C  ++  +KLP+N++F+F+TN+L++DITS DSK FHIN+  CKN+
Sbjct: 126 GIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFACKNI 185

Query: 186 TFDHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPG 245
           T + + I APD SPNTDGIH+  SE +NI+ + I TGDDCIS+GD  K + I ++TCGPG
Sbjct: 186 TLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPG 245

Query: 246 HGISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVN 305
           HGIS+GSLGK+  E+ VEGI +  C + NTSNG RIKTWP   G    +++HFEDI M N
Sbjct: 246 HGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGG-AVSEIHFEDITMNN 305

Query: 306 VSFPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEV 365
           VS PI+IDQ+YCPWN+C +   SK+K+S +SFKNI+GTSA P A+K +CS S PC++VE+
Sbjct: 306 VSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVEL 365

Query: 366 ANIDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPST 404
           A+ID+ ++G + P  SQCLNV PI  G  NP  C+ PVP    +T
Sbjct: 366 ADIDIQHNGAE-PATSQCLNVKPITIGKLNPIPCSGPVPKTPSAT 406

[Close]

BLAST of Clc03G05490 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 6.1e-118
Identity = 211/385 (54.81%), Postives = 276/385 (71.69%), Query Frame = 0


Query: 11  FPLLLLLVSNTKGQSGGGLFDVTKYGAKPNEDITTALASAWSEACASTTSSKVLIPKGTY 70
           F L+LL +++  G+S  G+FD+TKYGA  N DI+ AL +A+ EAC ST+ S ++IPKGT+
Sbjct: 9   FALVLLFLAHF-GESQTGVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTF 68

Query: 71  QLTQSNLKGPCKSPIEVQIEGTLQAPAQP---KGDGLIILEYVDQLTLSGTGVLDGQGKT 130
            + Q  L+GPCKSP+E+QI+ TL+AP+ P   K    + +  +DQ T+SG G+LDGQ   
Sbjct: 69  TMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAA 128

Query: 131 GWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTFDHVTITA 190
            WE   C   K C KLP NL FN +TNS +KDIT+LDSK+FH+N+  CKNLTF    ++A
Sbjct: 129 AWE---CKQSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSA 188

Query: 191 PDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHGISVGSLG 250
           P NSPNTDGIH+S S ++NI ++  +TGDDCISVGD  +Q+ I+ VTCGPGHGISVGSLG
Sbjct: 189 PANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLG 248

Query: 251 KYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVSFPIIIDQ 310
               E+ V G+ V+ C   NT NGVRIKTWP S       D+HFEDI + NVS P++IDQ
Sbjct: 249 GNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGV-VNDVHFEDIIVQNVSNPVVIDQ 308

Query: 311 EYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVANIDLTYSG 370
            YCP+N+CN+ + S++KISKVSF+NIKGTS T  AV LL SK +PCE +EV +ID+TYSG
Sbjct: 309 VYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSG 368

Query: 371 NQGPIISQCLNVNPIVSGVQNPRIC 393
            +GP  S C N+ P + G QNP +C
Sbjct: 369 KEGPAKSSCENIKPSLKGKQNPPVC 388

[Close]

BLAST of Clc03G05490 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 2.6e-116
Identity = 202/356 (56.74%), Postives = 261/356 (73.31%), Query Frame = 0


Query: 42  DITTALASAWSEACASTTSSKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQP-- 101
           D T AL +AW EACAS + S +L+PKG + +    L+GPCKS I +Q++GTL+APA P  
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSK 60

Query: 102 -KGDGLIILEYVDQLTLSGTGVLDGQGKTGWEKNDCHLK-KICAKLPMNLKFNFITNSLV 161
            KG G I L  +D LT+ G GV DGQGK+ W +NDCH    IC  L MNL+   +TNS++
Sbjct: 61  IKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSIL 120

Query: 162 KDITSLDSKNFHINLLGCKNLTFDHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDD 221
           +D+T+LDSKNFH+N++GCKNLTF+   I+A + S NTDGIH+  S+ +NI+NT+I TGDD
Sbjct: 121 RDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDD 180

Query: 222 CISVGDSNKQIAISDVTCGPGHGISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTW 281
           CIS+GD +K I I+++TCGPGHGISVGSLG+Y  E++V GI VK C +  + NGVRIKTW
Sbjct: 181 CISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTW 240

Query: 282 PDSVGSFPATDMHFEDIEMVNVSFPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTS 341
           P S     A++MHF+DI M +V  PI+IDQ YCP+NQC  +V S +K+SK+SFKNIKGTS
Sbjct: 241 PKSEPG-EASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTS 300

Query: 342 ATPVAVKLLCSKSLPCEDVEVANIDLTYSGNQGPIISQCLNVNPIVSGVQNPRICA 394
            T  AVKL+CSKS PC  VE+A+IDLTYSG  GP  S C N+ P + G Q P IC+
Sbjct: 301 TTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAICS 355

[Close]

BLAST of Clc03G05490 vs. ExPASy TrEMBL
Match: A0A5A7TRZ0 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00600 PE=3 SV=1)

HSP 1 Score: 682.2 bits (1759), Expect = 1.3e-192
Identity = 327/404 (80.94%), Postives = 362/404 (89.60%), Query Frame = 0


Query: 1   MRLRSNIVALFPLLLLLVSNTKGQSGGGLFDVTKYGAKPNEDITTALASAWSEACASTTS 60
           M L SN V L P+LLLLVSN+K QS GG+FD+TKYGAKPN D+T ALASAW EACASTT 
Sbjct: 1   MGLISNFVTLLPVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60

Query: 61  SKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQPKGDGLIILEYVDQLTLSGTGV 120
           SKVLIPKG+Y L+QSNLKGPCKS IE+QIEGTLQAPA PKGDGL++LEYVDQLT+SGTGV
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLLLLEYVDQLTVSGTGV 120

Query: 121 LDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTF 180
           LDGQGK GWEKNDCHLKK C KLPMNLK NF+TNS+VKDITSLDSKN+HINLLGCKNLTF
Sbjct: 121 LDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDSKNYHINLLGCKNLTF 180

Query: 181 DHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHG 240
           DHVTITAP NSPNTDGIH+SSSE INILNT IATGDDCISVGD+NKQ+ ISDVTCGPGHG
Sbjct: 181 DHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHG 240

Query: 241 ISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVS 300
           IS+GSLGKYSKE+ V G+TVKKCKL +T+NGVRIKTWPDS  +FPA+DMHFEDIEMVNVS
Sbjct: 241 ISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVS 300

Query: 301 FPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVAN 360
            P+IIDQEYCPWNQCNRKV SKIKIS VSFKNI+GTSATPVAVK++CS+S PCE VEVA+
Sbjct: 301 NPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKIVCSQSNPCEGVEVAD 360

Query: 361 IDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPSTD 405
           IDLTYSG++GPI SQC NV P++SG QNP IC EP P   PS+D
Sbjct: 361 IDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of Clc03G05490 vs. ExPASy TrEMBL
Match: A0A5A7ULW5 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G006240 PE=3 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.9e-192
Identity = 329/404 (81.44%), Postives = 363/404 (89.85%), Query Frame = 0


Query: 1   MRLRSNIVALFPLLLLLVSNTKGQSGGGLFDVTKYGAKPNEDITTALASAWSEACASTTS 60
           M LRSN VAL  L LLLVSN+K QS G +FDVT +GAKP+ DIT AL SAW E CAS T 
Sbjct: 1   MGLRSNFVALLLLFLLLVSNSKAQSSGAVFDVTSFGAKPDADITGALVSAWKEGCASITP 60

Query: 61  SKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQPKGDGLIILEYVDQLTLSGTGV 120
           SKVLIPKG+Y L+QSNLKGPCKS IE+QIEGTLQAP+ PKGDGL+ILEYVD+LT+SG GV
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSSIELQIEGTLQAPSDPKGDGLLILEYVDRLTVSGMGV 120

Query: 121 LDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTF 180
           LDGQGK GWEKNDCHLKKIC KLPMNLK NFITNS+VKDITSLDSKN+HINLLGCKNLTF
Sbjct: 121 LDGQGKEGWEKNDCHLKKICTKLPMNLKLNFITNSIVKDITSLDSKNYHINLLGCKNLTF 180

Query: 181 DHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHG 240
           DHVTITAP +SPNTDGIH+SSSE INILNT IATGDDCISVGD+NKQI ISDVTCGPGHG
Sbjct: 181 DHVTITAPGDSPNTDGIHVSSSEEINILNTNIATGDDCISVGDTNKQIVISDVTCGPGHG 240

Query: 241 ISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVS 300
           IS+GSLGKYSKE+ V G+TVKKCKL +T+NGVRIKTWPDSVG+FPA+DMHFEDIEMVNVS
Sbjct: 241 ISIGSLGKYSKEKEVVGVTVKKCKLTSTTNGVRIKTWPDSVGTFPASDMHFEDIEMVNVS 300

Query: 301 FPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVAN 360
            P+IIDQEYCPWNQCNRKV SKIKISKVSFKNI+GTSATPVAVK++CSKS PCE+VEVA+
Sbjct: 301 NPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKIVCSKSNPCEEVEVAD 360

Query: 361 IDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPSTD 405
           IDLTYSG++GPI SQC NV P++SG QNP IC EP P+D PSTD
Sbjct: 361 IDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPLDGPSTD 404

[Close]

BLAST of Clc03G05490 vs. ExPASy TrEMBL
Match: A0A5A7TR51 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00990 PE=3 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.9e-192
Identity = 327/404 (80.94%), Postives = 362/404 (89.60%), Query Frame = 0


Query: 1   MRLRSNIVALFPLLLLLVSNTKGQSGGGLFDVTKYGAKPNEDITTALASAWSEACASTTS 60
           M L SN VAL  +LLLLVSN+K QS GG+FD+TKYGAKPN D+T ALASAW EACASTT 
Sbjct: 1   MGLISNFVALLSVLLLLVSNSKAQSSGGVFDITKYGAKPNADVTAALASAWKEACASTTP 60

Query: 61  SKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQPKGDGLIILEYVDQLTLSGTGV 120
           SKVLIPKG+Y L+QSNLKGPCKS IE+QIEGTLQAPA PKGDGL++LEYVDQLT+SGTGV
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLLLLEYVDQLTVSGTGV 120

Query: 121 LDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTF 180
           LDGQGK GWEKNDCHLKK C KLPMNLK NF+TNS+VKDITSLDSKN+HINLLGCKNLTF
Sbjct: 121 LDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDSKNYHINLLGCKNLTF 180

Query: 181 DHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHG 240
           DHVTITAP NSPNTDGIH+SSSE INILNT IATGDDCISVGD+NKQ+ ISDVTCGPGHG
Sbjct: 181 DHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHG 240

Query: 241 ISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVS 300
           IS+GSLGKYSKE+ V G+TVKKCKL +T+NGVRIKTWPDS  +FPA+DMHFEDIEMVNVS
Sbjct: 241 ISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVS 300

Query: 301 FPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVAN 360
            P+IIDQEYCPWNQCNRKV SKIKIS VSFKNI+GTSATPVAVK++CS+S PCE VEVA+
Sbjct: 301 NPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKIVCSQSNPCEGVEVAD 360

Query: 361 IDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPSTD 405
           IDLTYSG++GPI SQC NV P++SG QNP IC EP P   PS+D
Sbjct: 361 IDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of Clc03G05490 vs. ExPASy TrEMBL
Match: A0A1S3B3X5 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103485719 PE=3 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 3.9e-192
Identity = 329/404 (81.44%), Postives = 363/404 (89.85%), Query Frame = 0


Query: 1   MRLRSNIVALFPLLLLLVSNTKGQSGGGLFDVTKYGAKPNEDITTALASAWSEACASTTS 60
           M LRSN VAL  L LLLVSN+K QS G +FDVT +GAKP+ DIT AL SAW E CAS T 
Sbjct: 1   MGLRSNFVALLLLFLLLVSNSKAQSSGAVFDVTSFGAKPDADITGALVSAWKEGCASITP 60

Query: 61  SKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQPKGDGLIILEYVDQLTLSGTGV 120
           SKVLIPKG+Y L+QSNLKGPCKS IE+QIEGTLQAP+ PKGDGL+ILEYVD+LT+SG GV
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSSIELQIEGTLQAPSDPKGDGLLILEYVDRLTVSGMGV 120

Query: 121 LDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTF 180
           LDGQGK GWEKNDCHLKKIC KLPMNLK NFITNS+VKDITSLDSKN+HINLLGCKNLTF
Sbjct: 121 LDGQGKEGWEKNDCHLKKICTKLPMNLKLNFITNSIVKDITSLDSKNYHINLLGCKNLTF 180

Query: 181 DHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHG 240
           DHVTITAP +SPNTDGIH+SSSE INILNT IATGDDCISVGD+NKQI ISDVTCGPGHG
Sbjct: 181 DHVTITAPGDSPNTDGIHVSSSEEINILNTNIATGDDCISVGDTNKQIVISDVTCGPGHG 240

Query: 241 ISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVS 300
           IS+GSLGKYSKE+ V G+TVKKCKL +T+NGVRIKTWPDSVG+FPA+DMHFEDIEMVNVS
Sbjct: 241 ISIGSLGKYSKEKEVVGVTVKKCKLTSTTNGVRIKTWPDSVGTFPASDMHFEDIEMVNVS 300

Query: 301 FPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVAN 360
            P+IIDQEYCPWNQCNRKV SKIKISKVSFKNI+GTSATPVAVK++CSKS PCE+VEVA+
Sbjct: 301 NPVIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKIVCSKSNPCEEVEVAD 360

Query: 361 IDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPSTD 405
           IDLTYSG++GPI SQC NV P++SG QNP IC EP P+D PSTD
Sbjct: 361 IDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPLDGPSTD 404

[Close]

BLAST of Clc03G05490 vs. ExPASy TrEMBL
Match: A0A5D3DYI3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00050 PE=3 SV=1)

HSP 1 Score: 679.9 bits (1753), Expect = 6.7e-192
Identity = 326/404 (80.69%), Postives = 361/404 (89.36%), Query Frame = 0


Query: 1   MRLRSNIVALFPLLLLLVSNTKGQSGGGLFDVTKYGAKPNEDITTALASAWSEACASTTS 60
           M L SN VAL P+LLLLVSN+K QS G +FD+TKYGAKPN D+T AL SAW EACASTT 
Sbjct: 1   MGLISNFVALLPVLLLLVSNSKAQSSGSVFDITKYGAKPNADVTAALVSAWKEACASTTP 60

Query: 61  SKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQPKGDGLIILEYVDQLTLSGTGV 120
           SKVLIPKG+Y L+QSNLKGPCKS IE+QIEGTLQAPA PKGDGL++LEYVDQLT+SGTGV
Sbjct: 61  SKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLLLLEYVDQLTVSGTGV 120

Query: 121 LDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTF 180
           LDGQGK GWEKNDCHLKK C KLPMNLK NF+TNS+VKDITSLDSKN+HINLLGCKNLTF
Sbjct: 121 LDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDSKNYHINLLGCKNLTF 180

Query: 181 DHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHG 240
           DHVTITAP NSPNTDGIH+SSSE INILNT IATGDDCISVGD+NKQ+ ISDVTCGPGHG
Sbjct: 181 DHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQVVISDVTCGPGHG 240

Query: 241 ISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVS 300
           IS+GSLGKYSKE+ V G+TVKKCKL +T+NGVRIKTWPDS  +FPA+DMHFEDIEMVNVS
Sbjct: 241 ISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFPASDMHFEDIEMVNVS 300

Query: 301 FPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVAN 360
            P+IIDQEYCPWNQCNRKV SKIKIS VSFKNI+GTSATPVAVK++CS+S PCE VEVA+
Sbjct: 301 NPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKIVCSQSNPCEGVEVAD 360

Query: 361 IDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPVPVDSPSTD 405
           IDLTYSG++GPI SQC NV P++SG QNP IC EP P   PS+D
Sbjct: 361 IDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of Clc03G05490 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 405.6 bits (1041), Expect = 4.7e-113
Identity = 190/367 (51.77%), Postives = 261/367 (71.12%), Query Frame = 0


Query: 31  DVTKYGAKPNEDITTALASAWSEACASTTSSKVLIPKGTYQLTQSNLKGPCKSPIEVQIE 90
           +V   G+    DIT AL  A++ AC S++ SKV+IPKG ++L +  ++GPCK+PIEV ++
Sbjct: 23  EVFTIGSSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQ 82

Query: 91  GTLQAP--AQPKGDGLIILEYVDQLTLSGTGVLDGQGKTGWEKNDCHLKKICAKLPMNLK 150
           GT++A   A    +  ++   +D   L+G G  DG+G   W  N+CH    C KLP++++
Sbjct: 83  GTVKADGNAIQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIR 142

Query: 151 FNFITNSLVKDITSLDSKNFHINLLGCKNLTFDHVTITAPDNSPNTDGIHLSSSEAINIL 210
           F+FI NS ++DI+S+D+KNFHIN+LG KN+T +++ I AP++SPNTDGIHL  S+ + IL
Sbjct: 143 FDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKIL 202

Query: 211 NTKIATGDDCISVGDSNKQIAISDVTCGPGHGISVGSLGKYSKEQAVEGITVKKCKLINT 270
           N+ I+TGDDCISVGD  K + +  VTCGPGHGISVGSLG+Y  EQ V GI V  C L  T
Sbjct: 203 NSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQET 262

Query: 271 SNGVRIKTWPDSVGSFPATDMHFEDIEMVNVSFPIIIDQEYCPWNQCNRKVASKIKISKV 330
            NG+RIKTWP +  S  A+D+HFEDI + +VS PI+IDQEYCPWNQCN++ AS IK+  +
Sbjct: 263 DNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNI 322

Query: 331 SFKNIKGTSATPVAVKLLCSKSLPCEDVEVANIDLTYSGNQGPIISQCLNVNPIVSGVQN 390
           SFKNI+GTS    AVKLLCSK  PC++VE+ +ID+ Y+G  GP    C NV+P + G Q+
Sbjct: 323 SFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQS 382

Query: 391 PRICAEP 396
           P+ C+ P
Sbjct: 383 PKACSAP 389

[Close]

BLAST of Clc03G05490 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 402.1 bits (1032), Expect = 5.2e-112
Identity = 195/378 (51.59%), Postives = 262/378 (69.31%), Query Frame = 0


Query: 31  DVTKYGAKPNEDITTALASAWSEACASTTSSKVLIPKGTYQLTQSNLKGPCKSPIEVQIE 90
           +V   G  P  DIT AL  A++ AC + T+SKV+I KG ++L +  + GPCK+P+E+ ++
Sbjct: 24  EVFNVGGSPGSDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQ 83

Query: 91  GTLQAPA---QPKGDGLIILEYVDQLTLSGTGVLDGQGKTGWEKNDCHLKKICAKLPMNL 150
           GTL+A     Q K   ++ L  ++   L+G G+ DG+G   W  N+CH    C KLP+++
Sbjct: 84  GTLKADGKAIQGKERWVVFLR-INGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISI 143

Query: 151 KFNFITNSLVKDITSLDSKNFHINLLGCKNLTFDHVTITAPDNSPNTDGIHLSSSEAINI 210
           +F+F+ N+ ++DI+S+D+KNFHIN+LG KN+TFD+V + AP  SPNTDGIHL  SE + I
Sbjct: 144 RFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKI 203

Query: 211 LNTKIATGDDCISVGDSNKQIAISDVTCGPGHGISVGSLGKYSKEQAVEGITVKKCKLIN 270
           LN+KIATGDDCISVGD  K + + +V CGPGHGISVGSLG+Y  EQ V GITV  C L  
Sbjct: 204 LNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQG 263

Query: 271 TSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVSFPIIIDQEYCPWNQCNRKVASKIKISK 330
           T NG+RIKTWP +  +  A+ +HFE+I + NVS PI+IDQEYCPWNQCN++  S IK+  
Sbjct: 264 TDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVD 323

Query: 331 VSFKNIKGTSATPVAVKLLCSKSLPCEDVEVANIDLTYSGNQGPIISQCLNVNPIVSGVQ 390
           +SFKNI+GTS    AVKLLCSK+ PC +VE+ NI+L Y G  GP    C NV+P + G Q
Sbjct: 324 ISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQ 383

Query: 391 NPRIC-AEPVPVDSPSTD 405
           NP+ C A P P  +   D
Sbjct: 384 NPKACSAGPTPKTAAKGD 400

[Close]

BLAST of Clc03G05490 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 391.3 bits (1004), Expect = 9.1e-109
Identity = 190/397 (47.86%), Postives = 268/397 (67.51%), Query Frame = 0


Query: 2   RLRSNIVALFPLLLL-LVSNTKGQSGGGLFDVTKYGAKPNEDITTALASAWSEACASTTS 61
           R+   + A F   LL L +N K      +F++    + P  DIT AL  A++EAC   T 
Sbjct: 3   RVHFGVSAFFVFCLLGLSANAK------IFNI---NSPPGSDITNALLKAFNEACQFPTK 62

Query: 62  SKVLIPKGTYQLTQSNLKGPCKSPIEVQIEGTLQAPAQPKG-DGLIILEYVDQLTLSGTG 121
           S V+IPKG Y+L +  + GPCK+PI + + GT++A     G +  +    ++   L+G G
Sbjct: 63  STVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGNANGKEKWVAFRNINGFKLNGGG 122

Query: 122 VLDGQGKTGWEKNDCHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLT 181
           V DG+G   W  N+CH    C KLP++++F+F+T++ ++ ITSLD+K+FHIN++G KN+T
Sbjct: 123 VFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVT 182

Query: 182 FDHVTITAPDNSPNTDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGH 241
           F+ V I AP  SPNTDGIH+  S+ I I+N+ I+TGDDC+SVGD  K + +  VTCGPGH
Sbjct: 183 FEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGH 242

Query: 242 GISVGSLGKYSKEQAVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNV 301
           GIS+GSLG+YS E+ V GI +  C L  T NG+RIKTWP +  +  A+D+HFE+I + NV
Sbjct: 243 GISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHFENILLKNV 302

Query: 302 SFPIIIDQEYCPWNQCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVA 361
           S PI+IDQEYCPWNQCN++  S IK++ +SFK I+GTS    AVKLLCSK  PC++VEV 
Sbjct: 303 SNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVG 362

Query: 362 NIDLTYSGNQGPIISQCLNVNPIVSGVQNPRICAEPV 397
           ++++ Y+G  GP   QC NV+P + G Q P+ C+ PV
Sbjct: 363 DVNIQYTGADGPATFQCSNVSPKLVGTQIPKACSSPV 390

[Close]

BLAST of Clc03G05490 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 389.8 bits (1000), Expect = 2.7e-108
Identity = 182/373 (48.79%), Postives = 256/373 (68.63%), Query Frame = 0


Query: 31  DVTKYGAKPNEDITTALASAWSEACASTTSSKVLIPKGTYQLTQSNLKGPCKSPIEVQIE 90
           +V +  + P  DIT AL  A++ AC S T  KV+IPKG ++L +  + GPCKSP+E+ + 
Sbjct: 24  EVLRLTSSPGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLL 83

Query: 91  GTLQAPAQP--KGDGLIILEYVDQLTLSGTGVLDGQGKTGWEKNDCHLKKICAKLPMNLK 150
           GT+ A        +  ++ + +D   L+G G  DG+G   W  N+CH    C KLP++++
Sbjct: 84  GTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIR 143

Query: 151 FNFITNSLVKDITSLDSKNFHINLLGCKNLTFDHVTITAPDNSPNTDGIHLSSSEAINIL 210
           F+F+TN+ ++DI+S+D+KNFHIN++G KN+TFD+V I AP  SPNTDGIHL  S  ++I+
Sbjct: 144 FDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSII 203

Query: 211 NTKIATGDDCISVGDSNKQIAISDVTCGPGHGISVGSLGKYSKEQAVEGITVKKCKLINT 270
           N++I+TGDDC+SVGD    + + +V CGPGHGISVGSLG+Y  EQ V GI V  C L  T
Sbjct: 204 NSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQET 263

Query: 271 SNGVRIKTWPDSVGSFPATDMHFEDIEMVNVSFPIIIDQEYCPWNQCNRKVASKIKISKV 330
            NG+RIKTWP +  S  A+++HFE+I + NVS PI+IDQEYCPWNQCN++ +S IK++ +
Sbjct: 264 DNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANI 323

Query: 331 SFKNIKGTSATPVAVKLLCSKSLPCEDVEVANIDLTYSGNQGPIISQCLNVNPIVSGVQN 390
           SF+ I+GTS    AVKLLCSK  PCE+V+V +I++ Y+G  GP    C NV P + G Q 
Sbjct: 324 SFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVGTQF 383

Query: 391 PRICAEPVPVDSP 402
           P+ C  P  +  P
Sbjct: 384 PKACNTPPVLTQP 396

[Close]

BLAST of Clc03G05490 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 372.9 bits (956), Expect = 3.4e-103
Identity = 182/381 (47.77%), Postives = 248/381 (65.09%), Query Frame = 0


Query: 21  TKGQSGGGLFDVTKYGAKPN--EDITTALASAWSEACASTTSSKVLIPKGTYQLTQSNLK 80
           T  + GG   DV   GAK +   D + A A+AW EACA+   S + +PKG Y +     K
Sbjct: 62  TGAKPGGASLDVKASGAKGDGKTDDSAAFAAAWKEACAA--GSTITVPKGEYLVESLEFK 121

Query: 81  GPCKSPIEVQIEGTLQAPAQPKGD----GLIILEYVDQLTLSGT-GVLDGQGKTGWEKND 140
           GPCK P+ +++ G  +APA  K      G I  E +   TL+G   + DGQG   W+ ND
Sbjct: 122 GPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKAND 181

Query: 141 CHLKKICAKLPMNLKFNFITNSLVKDITSLDSKNFHINLLGCKNLTFDHVTITAPDNSPN 200
           C     C  LP+N++F  +TNS +  ITS +SK FH+N+L CKN+T   + I AP  S N
Sbjct: 182 CAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLN 241

Query: 201 TDGIHLSSSEAINILNTKIATGDDCISVGDSNKQIAISDVTCGPGHGISVGSLGKYSKEQ 260
           TDGIH+  S  +N++  KI TGDDC+S+GD  + + + +V CGPGHGIS+GSLG+Y  EQ
Sbjct: 242 TDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQ 301

Query: 261 AVEGITVKKCKLINTSNGVRIKTWPDSVGSFPATDMHFEDIEMVNVSFPIIIDQEYCPWN 320
            V+G+TV+KC + NT NGVRIKTWP S     A+++ FEDI M NVS P++IDQEYCP+ 
Sbjct: 302 PVKGVTVRKCLIKNTDNGVRIKTWPGSPPGI-ASNILFEDITMDNVSLPVLIDQEYCPYG 361

Query: 321 QCNRKVASKIKISKVSFKNIKGTSATPVAVKLLCSKSLPCEDVEVANIDLTYSGNQGPII 380
            C   V SK+K+S V+ KNIKGTSAT VAVKL+CSK +PC ++ +++I+L ++G +GP +
Sbjct: 362 HCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAV 421

Query: 381 SQCLNVNPIVSGVQNPRICAE 395
           S C N+ PI+SG   P  C E
Sbjct: 422 SACSNIKPILSGKLVPAACTE 439

The following BLAST results are available for this feature:

BLAST of Clc03G05490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895545.1	3.0e-202	87.13	exopolygalacturonase-like [Benincasa hispida]	[more]
KAA0045608.1	2.8e-192	80.94	exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK02648.1 exopolygalactur...	[more]
XP_011652893.2	3.6e-192	81.28	exopolygalacturonase [Cucumis sativus] >KGN64588.2 hypothetical protein Csa_0140...	[more]
XP_008441641.1	8.1e-192	81.44	PREDICTED: exopolygalacturonase-like [Cucumis melo] >KAA0056903.1 exopolygalactu...	[more]
KAA0045594.1	8.1e-192	80.94	exopolygalacturonase-like [Cucumis melo var. makuwa]	[more]

BLAST of Clc03G05490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40312	4.5e-121	56.38	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q39786	1.0e-120	52.84	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q39766	1.5e-119	52.35	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q05967	6.1e-118	54.81	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
P24548	2.6e-116	56.74	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]

BLAST of Clc03G05490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRZ0	1.3e-192	80.94	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7ULW5	3.9e-192	81.44	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TR51	3.9e-192	80.94	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A1S3B3X5	3.9e-192	81.44	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103485719 PE=3 SV=1	[more]
A0A5D3DYI3	6.7e-192	80.69	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Clc03G05490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	4.7e-113	51.77	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	5.2e-112	51.59	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	9.1e-109	47.86	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	2.7e-108	48.79	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	3.4e-103	47.77	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 202..223 e-value: 2900.0 score: 3.9 coord: 353..381 e-value: 9700.0 score: 0.2 coord: 255..276 e-value: 12.0 score: 14.8 coord: 175..201 e-value: 17.0 score: 14.3
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 55..380 e-value: 3.8E-102 score: 341.7
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 232..245
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 17..399 e-value: 3.0E-105 score: 354.6
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 14..396
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 14..396
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 28..394

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G05490.1	Clc03G05490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity