Clc03G04600 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTATATATTCCGAAAGAAAAGGTAATACAAAGAAGAAAACTCAACGTGTGAATGGCTAAAAATTGACAATGGCAGCATCCAAGAAATGGGGAAGGGAAAGCTTCCATATAAAGAGGCTAGCTGAGGTATCACATAAGCTAGCTGCAAGAATTGACAGCTCAAAATTTAGGATTTCTTCAATGGAGTTGGAGCAATTATCAGGTTCTTCTGGTCTTCAACATCAAGATCATTATTCTTCCTTTATACAACAAATCACTTTCTCCAATTCTGAAATAGTTGCCGCCACCGATGAAGAACAAACTCATATTCAAGCAGCTGATTCTCATCATTCGGGCCGAGCACATGATTTTCAAAGTGAACCTCTGAGTTCTATCATTACCTCTCCTTCCTTCATCAGTACGTAAGTTTTATTTTACTATAACCATATGTATTTCTCATCAACAATTGGTATGGCTCCATTCTTTCAACCAATTTCTCCACAAAACTTGTCTGTTCTGCTGCTGCAGCAATATGAAGAGTGTGTCACATCGGCTCGTTAACGCCATATCGAGGCCCTCCAATCGATGTATCTTGATTAAAGATTCCGCTTTGTTCCAGTCGCCAGTGAGTGCGGCCAGATATAGGCTATTCCAAAATAAAAGGTCATTTTTCCTTGGTATACCTGAACAAAAACATACCCCACAAGTCATGAAATTGATAATTGAAGAAAAAAAAAGAGCACAAAAACGTAAACACTCAAAAATCAACACAGGAATTTACGTGGTTAATTAATTTCGTCCAAAATTAGTTACATACAAATTTTCCGGAAAAAAATTTCAACATTCAAAATTTTAATCTCCCTATGAAAAAAAAAAAATCTTTTCTTTTTATTTTATTTAATAAAAAAAATATTTCGAAATTAATTACTCAAAATTTTATCATTTATTGTCTATTTTATCTTTTAAAAAACTAGCAAATTTTGAATTATGACAATATGATAAGAATTAAAAAAAAAATGTTGAAATAAAATACCAGATAAATTTAGGAGTCTAAAATAATTATGATACATCTACCATTTCTCTAAATTGGAAATCCTTTCTCTAGCCTCTTATTTCTACCTTATTCTTGAATGAATCGCTTTGTTGTCCCCTTTTGAACAAAAATGTAGGGTCACTCACAACATTATTCAATAAACAAAATACTAATTACTATTTCAAAAATTGATTGGTTGACCATTACTTTGCAATTATTGAAAACAAAATAATAATAAAATGTAGAGATTGAATTATGGTAAAAGGTATTGATGATGATTTTGAAGTTACCAAAGGTTAAGAATTCACATATTTTCGAGCAGGAAGGAAAAAAAAGTAACTTTCCATCTATCAAAAGGTCTATCAAAACCTTTAAGAAACCTTTTTTTTTTTTAATACACGAGAATTAGTAGATACATCTAAATATCTCAATTAAATTTTGTCTTAAGTGGAAGGGTCTAAAATCAGTATTTTATCTAATTTTTTAAAAAGATGTCTTACTAAATTTTTAACAATTTTTTTTCTAATCATTTAGTTTGAAAGTGTTTAGTATTTCTTAATTTTAATAATAAGTTCCATAGTTTAGTTCGAATCTATCCTTGACCACTATGGTAACTTAAGCTAGAGGTTGCATAAAAGTAATCAAGAAAAATACAATCTTTTAACTCTACATGTGAATAACATTAGTATATTTCATCATTATAGTCTCTAACTTCCATCTCTAAAACCTTTGAATTAATCAAAAGTTGAAAGCTTATTGACACAAAAGCCACTTCCCTAGACGATATGTAAATATTTGTGTATAATTATTACTATTATAACAATAAAGAATATATTGTTTCCTTGAAAAGGATTAGGTAATTCAACCAAATCACATTAAAACAACTCCATTTCATCCACTTCATTTACATCCTCTAACTATATTTATACAACTCTCTCTGAGATTAATTTCCCTTCAACCCAAAAGTTAATGGCCAATTCAACCAACACCAAGTTTCCACTCTCTCTCTTCTTCATTCTCACTGCTTTATCTTCTGCTGACTCATCAAGAATAATCCTCGACCAAGTGGCTCCACAGCCTCTTGACCAAGTCAAATCAAATCTATCTTTCTTCATGCACGATATTATAGGTGGGTTCCACCCAACTGCAAGAACTGTCACCGGAACCACACCCAACAAGGCGGAGTCCACCGCCGGTCTCCCCTTCTCCAAACCCAAAAAAACCATTTTCCCTCTCGCCGGTGGAGTCCCACTCATAAGCACCAACAGAAATTCAAACGGTAGAGGAGTAAACAACAATAACAATAATAACCAACCGTTTGTTACCGCTGGTCAGCTCCCGTCCGGCGCCGCCCTCCAACATGTCACGTTCGGCTCGCTCACGACCATCGACGACGAGTTGACAGAAGGTGAAGAGTTGGGATCAGCTGTAATGGGCAGAGGTCAGGGATTTTACTTTGTTAGCTCTTTGGATGGTTCTAGCCATACCGTAGCATTGACCATCATCCTAGACCAACATGACGAAGACGTGGAGAAGAAGGATGAAGATACAATAAGCTTCTTTGGAGTCCACCGGAGAGGGTCGCCGGAGTCGCCGGTAGCGGTGGTTGGTGGGACCGGGAAGTATGAGAATGCTGGTGGGTTTGCGGTGATCGAGAACCTCCGGCGGAGGGAGAACCAATACATGACTGATGGAGATGATACGATTGTCCACTTTAGAGTTTATCTCTCCGAGTAG CTTATATATTCCGAAAGAAAAGGTAATACAAAGAAGAAAACTCAACGTGTGAATGGCTAAAAATTGACAATGGCAGCATCCAAGAAATGGGGAAGGGAAAGCTTCCATATAAAGAGGCTAGCTGAGGTATCACATAAGCTAGCTGCAAGAATTGACAGCTCAAAATTTAGGATTTCTTCAATGGAGTTGGAGCAATTATCAGGTTCTTCTGGTCTTCAACATCAAGATCATTATTCTTCCTTTATACAACAAATCACTTTCTCCAATTCTGAAATAGTTGCCGCCACCGATGAAGAACAAACTCATATTCAAGCAGCTGATTCTCATCATTCGGGCCGAGCACATGATTTTCAAAGTGAACCTCTGAGTTCTATCATTACCTCTCCTTCCTTCATCAGTACCAATATGAAGAGTGTGTCACATCGGCTCGTTAACGCCATATCGAGGCCCTCCAATCGATGTATCTTGATTAAAGATTCCGCTTTGTTCCAGTCGCCATTAATGGCCAATTCAACCAACACCAAGTTTCCACTCTCTCTCTTCTTCATTCTCACTGCTTTATCTTCTGCTGACTCATCAAGAATAATCCTCGACCAAGTGGCTCCACAGCCTCTTGACCAAGTCAAATCAAATCTATCTTTCTTCATGCACGATATTATAGGTGGGTTCCACCCAACTGCAAGAACTGTCACCGGAACCACACCCAACAAGGCGGAGTCCACCGCCGGTCTCCCCTTCTCCAAACCCAAAAAAACCATTTTCCCTCTCGCCGGTGGAGTCCCACTCATAAGCACCAACAGAAATTCAAACGGTAGAGGAGTAAACAACAATAACAATAATAACCAACCGTTTGTTACCGCTGGTCAGCTCCCGTCCGGCGCCGCCCTCCAACATGTCACGTTCGGCTCGCTCACGACCATCGACGACGAGTTGACAGAAGGTGAAGAGTTGGGATCAGCTGTAATGGGCAGAGGTCAGGGATTTTACTTTGTTAGCTCTTTGGATGGTTCTAGCCATACCGTAGCATTGACCATCATCCTAGACCAACATGACGAAGACGTGGAGAAGAAGGATGAAGATACAATAAGCTTCTTTGGAGTCCACCGGAGAGGGTCGCCGGAGTCGCCGGTAGCGGTGGTTGGTGGGACCGGGAAGTATGAGAATGCTGGTGGGTTTGCGGTGATCGAGAACCTCCGGCGGAGGGAGAACCAATACATGACTGATGGAGATGATACGATTGTCCACTTTAGAGTTTATCTCTCCGAGTAG ATGGCAGCATCCAAGAAATGGGGAAGGGAAAGCTTCCATATAAAGAGGCTAGCTGAGGTATCACATAAGCTAGCTGCAAGAATTGACAGCTCAAAATTTAGGATTTCTTCAATGGAGTTGGAGCAATTATCAGGTTCTTCTGGTCTTCAACATCAAGATCATTATTCTTCCTTTATACAACAAATCACTTTCTCCAATTCTGAAATAGTTGCCGCCACCGATGAAGAACAAACTCATATTCAAGCAGCTGATTCTCATCATTCGGGCCGAGCACATGATTTTCAAAGTGAACCTCTGAGTTCTATCATTACCTCTCCTTCCTTCATCAGTACCAATATGAAGAGTGTGTCACATCGGCTCGTTAACGCCATATCGAGGCCCTCCAATCGATGTATCTTGATTAAAGATTCCGCTTTGTTCCAGTCGCCATTAATGGCCAATTCAACCAACACCAAGTTTCCACTCTCTCTCTTCTTCATTCTCACTGCTTTATCTTCTGCTGACTCATCAAGAATAATCCTCGACCAAGTGGCTCCACAGCCTCTTGACCAAGTCAAATCAAATCTATCTTTCTTCATGCACGATATTATAGGTGGGTTCCACCCAACTGCAAGAACTGTCACCGGAACCACACCCAACAAGGCGGAGTCCACCGCCGGTCTCCCCTTCTCCAAACCCAAAAAAACCATTTTCCCTCTCGCCGGTGGAGTCCCACTCATAAGCACCAACAGAAATTCAAACGGTAGAGGAGTAAACAACAATAACAATAATAACCAACCGTTTGTTACCGCTGGTCAGCTCCCGTCCGGCGCCGCCCTCCAACATGTCACGTTCGGCTCGCTCACGACCATCGACGACGAGTTGACAGAAGGTGAAGAGTTGGGATCAGCTGTAATGGGCAGAGGTCAGGGATTTTACTTTGTTAGCTCTTTGGATGGTTCTAGCCATACCGTAGCATTGACCATCATCCTAGACCAACATGACGAAGACGTGGAGAAGAAGGATGAAGATACAATAAGCTTCTTTGGAGTCCACCGGAGAGGGTCGCCGGAGTCGCCGGTAGCGGTGGTTGGTGGGACCGGGAAGTATGAGAATGCTGGTGGGTTTGCGGTGATCGAGAACCTCCGGCGGAGGGAGAACCAATACATGACTGATGGAGATGATACGATTGTCCACTTTAGAGTTTATCTCTCCGAGTAG MAASKKWGRESFHIKRLAEVSHKLAARIDSSKFRISSMELEQLSGSSGLQHQDHYSSFIQQITFSNSEIVAATDEEQTHIQAADSHHSGRAHDFQSEPLSSIITSPSFISTNMKSVSHRLVNAISRPSNRCILIKDSALFQSPLMANSTNTKFPLSLFFILTALSSADSSRIILDQVAPQPLDQVKSNLSFFMHDIIGGFHPTARTVTGTTPNKAESTAGLPFSKPKKTIFPLAGGVPLISTNRNSNGRGVNNNNNNNQPFVTAGQLPSGAALQHVTFGSLTTIDDELTEGEELGSAVMGRGQGFYFVSSLDGSSHTVALTIILDQHDEDVEKKDEDTISFFGVHRRGSPESPVAVVGGTGKYENAGGFAVIENLRRRENQYMTDGDDTIVHFRVYLSE Homology
BLAST of Clc03G04600 vs. NCBI nr
Match: XP_038895510.1 (dirigent protein 9-like [Benincasa hispida]) HSP 1 Score: 458.0 bits (1177), Expect = 8.4e-125 Identity = 231/256 (90.23%), Postives = 242/256 (94.53%), Query Frame = 0
BLAST of Clc03G04600 vs. NCBI nr
Match: XP_008440684.1 (PREDICTED: dirigent protein 9-like [Cucumis melo] >TYJ99319.1 dirigent protein 9-like [Cucumis melo var. makuwa]) HSP 1 Score: 434.5 bits (1116), Expect = 9.9e-118 Identity = 220/258 (85.27%), Postives = 235/258 (91.09%), Query Frame = 0
BLAST of Clc03G04600 vs. NCBI nr
Match: KAA0055389.1 (dirigent protein 9-like [Cucumis melo var. makuwa]) HSP 1 Score: 433.0 bits (1112), Expect = 2.9e-117 Identity = 219/258 (84.88%), Postives = 235/258 (91.09%), Query Frame = 0
BLAST of Clc03G04600 vs. NCBI nr
Match: XP_011652507.2 (dirigent protein 24 [Cucumis sativus] >KGN64478.1 hypothetical protein Csa_014122 [Cucumis sativus]) HSP 1 Score: 419.5 bits (1077), Expect = 3.3e-113 Identity = 213/257 (82.88%), Postives = 231/257 (89.88%), Query Frame = 0
BLAST of Clc03G04600 vs. NCBI nr
Match: XP_022954434.1 (dirigent protein 24-like [Cucurbita moschata]) HSP 1 Score: 289.3 bits (739), Expect = 5.2e-74 Identity = 157/249 (63.05%), Postives = 180/249 (72.29%), Query Frame = 0
BLAST of Clc03G04600 vs. ExPASy Swiss-Prot
Match: O80630 (Dirigent protein 9 OS=Arabidopsis thaliana OX=3702 GN=DIR9 PE=2 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 9.2e-58 Identity = 119/248 (47.98%), Postives = 159/248 (64.11%), Query Frame = 0
BLAST of Clc03G04600 vs. ExPASy Swiss-Prot
Match: Q9M3C8 (Dirigent protein 24 OS=Arabidopsis thaliana OX=3702 GN=DIR24 PE=2 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.3e-56 Identity = 122/262 (46.56%), Postives = 160/262 (61.07%), Query Frame = 0
BLAST of Clc03G04600 vs. ExPASy Swiss-Prot
Match: Q9SIA8 (Dirigent protein 10 OS=Arabidopsis thaliana OX=3702 GN=DIR10 PE=2 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 3.8e-43 Identity = 107/241 (44.40%), Postives = 141/241 (58.51%), Query Frame = 0
BLAST of Clc03G04600 vs. ExPASy Swiss-Prot
Match: Q9LQQ0 (Dirigent protein 25 OS=Arabidopsis thaliana OX=3702 GN=DIR25 PE=3 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 6.4e-43 Identity = 102/241 (42.32%), Postives = 140/241 (58.09%), Query Frame = 0
BLAST of Clc03G04600 vs. ExPASy Swiss-Prot
Match: Q9T0H8 (Dirigent protein 18 OS=Arabidopsis thaliana OX=3702 GN=DIR18 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.3e-22 Identity = 84/257 (32.68%), Postives = 131/257 (50.97%), Query Frame = 0
BLAST of Clc03G04600 vs. ExPASy TrEMBL
Match: A0A5D3BK51 (Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005330 PE=3 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 4.8e-118 Identity = 220/258 (85.27%), Postives = 235/258 (91.09%), Query Frame = 0
BLAST of Clc03G04600 vs. ExPASy TrEMBL
Match: A0A1S3B188 (Dirigent protein OS=Cucumis melo OX=3656 GN=LOC103485022 PE=3 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 4.8e-118 Identity = 220/258 (85.27%), Postives = 235/258 (91.09%), Query Frame = 0
BLAST of Clc03G04600 vs. ExPASy TrEMBL
Match: A0A5A7UPJ3 (Dirigent protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002340 PE=3 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 1.4e-117 Identity = 219/258 (84.88%), Postives = 235/258 (91.09%), Query Frame = 0
BLAST of Clc03G04600 vs. ExPASy TrEMBL
Match: A0A0A0LRU2 (Dirigent protein OS=Cucumis sativus OX=3659 GN=Csa_1G058130 PE=3 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 1.6e-113 Identity = 213/257 (82.88%), Postives = 231/257 (89.88%), Query Frame = 0
BLAST of Clc03G04600 vs. ExPASy TrEMBL
Match: A0A6J1GSZ8 (Dirigent protein OS=Cucurbita moschata OX=3662 GN=LOC111456695 PE=3 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 2.5e-74 Identity = 157/249 (63.05%), Postives = 180/249 (72.29%), Query Frame = 0
BLAST of Clc03G04600 vs. TAIR 10
Match: AT2G39430.1 (Disease resistance-responsive (dirigent-like protein) family protein ) HSP 1 Score: 225.7 bits (574), Expect = 6.5e-59 Identity = 119/248 (47.98%), Postives = 159/248 (64.11%), Query Frame = 0
BLAST of Clc03G04600 vs. TAIR 10
Match: AT3G55230.1 (Disease resistance-responsive (dirigent-like protein) family protein ) HSP 1 Score: 221.9 bits (564), Expect = 9.4e-58 Identity = 122/262 (46.56%), Postives = 160/262 (61.07%), Query Frame = 0
BLAST of Clc03G04600 vs. TAIR 10
Match: AT2G28670.1 (Disease resistance-responsive (dirigent-like protein) family protein ) HSP 1 Score: 177.2 bits (448), Expect = 2.7e-44 Identity = 107/241 (44.40%), Postives = 141/241 (58.51%), Query Frame = 0
BLAST of Clc03G04600 vs. TAIR 10
Match: AT1G07730.2 (Disease resistance-responsive (dirigent-like protein) family protein ) HSP 1 Score: 176.4 bits (446), Expect = 4.5e-44 Identity = 102/241 (42.32%), Postives = 140/241 (58.09%), Query Frame = 0
BLAST of Clc03G04600 vs. TAIR 10
Match: AT2G28670.2 (Disease resistance-responsive (dirigent-like protein) family protein ) HSP 1 Score: 171.4 bits (433), Expect = 1.5e-42 Identity = 104/235 (44.26%), Postives = 137/235 (58.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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