Clc03G04380 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G04380
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	protein PLASTID TRANSCRIPTIONALLY ACTIVE 14
Location	ClcChr03: 4273796 .. 4283606 (+)
RNA-Seq Expression	Clc03G04380
Synteny	Clc03G04380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATTCCATCTCCTTCCATCAAACCACTCACCGCTTCATCCCCTGCCCGCAGGTTCTTTCTTCCTTTCTCGCTATGTCAACAAAACTTTCTCCTTGTTCGTCTCTCATCTTTTCGTTTTCTCTATTATGAATTCAGGTCAAGGATTTCCGGTCCTTTTCGTCACCAAGATTCAGTTACTGTTCTTCCACTTCCTCTAAAGGCAGACTGCGGCCGATTAAAGCTGCTACCGAAATTCCCGCATTTCCTCTTCTTCAACCTCCCAAAGTGGACGAATCTCCTTCTGAGGTGAAATCCCTCGATAACCACTATTTAATTTTCGTCTTCCATGAATGATTTTGTAAAATGCTTGGGCATCCTCGTGCGTTGGGTTAACGTTGAATCTTAACATCTATTTCCCCCCTTAAACTTCCGTAGTTGGAACCAGCAGACCCTGACTTCTATAAGATAGGATATGTTAGAAGTATGCGAGCTTATGGAATTGAATTCAAAGAAGGACCCGATGGATTTGGTGTATATGCTTCCAAAGATGTTGAGCCTCTTCGCCGTGCTAGGGTCAGTTGTATGCATTACTTCTAAAATTCTCAGTTCTGTTCAAACACATGGAGTTTAACATGCTACTTGGTCGTGATGACTAAGAACGATGTTTTCTTTATCTATTGGTTCACAGGTAATCATGGAAATTCCTTTAGAACTAATGTTAACAATAAGCAAGAAACAACCGTGGATGTTTTTCCCTGATATAATTCCAGTGGGTCATCCAATATTTGATATAATTAACTCGACAAATCCAGAGGTAAACCAAACTCACTTATCATTAGATTGAAGATAATATATCTTAGCTTGTTTTTGTTATTTTTAACTGAAATATTAATTTTATCATTTTATTCTGGTTTAGCTGATTTGATTTATGCCTCTAGCTTCTACCTGGCTCTCTGATGTTTTGTCCCATTCAATTCGAATAAATTCCCAGTTATCATATAGCATATTTTTTTAGGTGAATATTGGTTCTGTTCTTTTGTTTGTAAATGACTGATATGAGGTTATCTTTTGATGGCAGACAGATTGGGATTTAAGGTTAGCGTGTCTTCTGTTGTATGCATTTGATCGAGAGGACAACTTTTGGCAGCTCTATGGTGATTTTCTACCAAGTTTTGACGAATGTACAAGCTTGCTTCTAGCCTCCGAGGTACCTATGAATGAACAGTGAATTATTCTATTGATGATTATGTAGTGAAAATATCTTTTGTGCCTAACTATGGAGGTGTAATATGATTTAATGAATCAGCCTATGGTTAATTTGAAGTAGAAGAAAGTGAGAAATGTGGGAATGCAATTTAATTAGAGTACTATTGAAATATATTGGAACTTTTTTTCCCCAATGGTTGCTCCAATCCTCTTTTTTATTTTTAACGATTCTGTTATTTTATTGTCAATTATTCTTTTTGATTGGTCAATCCATTTCTTATTAGTTTCACGGTTCCTTCATGATTAACTTGCGTTATGTAAAATCTCTTATGCATTTTAGGAAGAAATTTTGGAGCTGCAGGATCAAAATCTTGCTTCCATCATCAGAGACCAGCAGCGTCGTGCTTTAGAGTTCTGGGAAAGGAACTGGGTAAATTTTCTCTGTTACATGTATGGAGCGTGCTATTAGTTCTCCATTATACTAATGTGCCTACTGCTCTTTTATGGCTTTTTTCTTTAATACTACAGCACAGTGGCGTACCTCTTAAAATTAAGAGGCTTGCTCAAGATCCTAAAAGATTCATTTGGGCTGTGAGTATAGCACAATCGCGATGCATAAACATGCAAACAAGGATCGGAGCCCTAGTACAAGATGCAAATATGCTAATTCCTTATGCTGGTAAACTTCTGCTTGGGGGGGGGGGGGGGGGGGGGGTATTATGTGTCTGCTAAGGTAGAATTCTGGATGTCAAACAATAAAGTAGCATTTATATATCAGGTTTTGAAAGTGCTCTTTATTTGGATAAGAATCAACGTTACGAAACTGTTGGCAACATTTTAATAGGAATTAAAAGCTAAGATGCCTCAAAATGCATCACAATGTTATGTTAATTTTTTATGTCATAAATTGTGTAATTTTTAACCATATTATGCAGATATGCTGAACCATTCTTTTCGGCCAAATTGTTTTTTTCACTGGCGTTTTAAGGATAGGATGCTTGAGGTGATGATAAATGCTGGGCAGCAGATCAAAAAAGGGCAAGAGGTTTTTCATTGTCTTATTATATTCAGCTTTAGCAATGTCCCTGCATAACTAAAACGATTTCTTTCTTGGCAATCTTATATGAAAGGATATTGGTTGCATTATTCCAAAAAGTTCAAAGATTTCAATATGAAAATTATATATATGAGGCAAACCATTTCATATCAGAGATGAAATATTAAAAAAAAATATTAAAAAAATAATAATAAATAAAGAAGAAAAAGAAGAAGAAAGAAAGAAAGGCAAGAAGATAAGAAATTTCTTTGCAAGCACTGAATGGGGGATTGCAAATTTACAATCCAACATTATAACACTCAAAGGGAACATAAAAAACTGTGTAGTTTGGCAGTTTATAGTTTTATTTATCCAACTGGAGGTGGTGTGCTGTACTTCCTTCCAAAAGCTATAAAAATCCATGTCTATCTCTTTGAAAGTTCTATTGTTTCTTGTATCAAAGTTTACCAAAAGATATCTCTAGTAGCAATTTTTCAAAGAGTCCTAGTTTCTCCTGTAGGCCACCATCCCGAAAATGCCAAATTTAGATCTTCATGCAAACAGCAAACTAGTCTGAACTTGTTGCATAATCTTGACCAACTCTCCACAGCCAAAGAACAGGAAAGAATAAGAAGAAAAAAAAAAAAGATGGTTGATGGTTTTACTCGTCCTCCCAAAGCTCATACATACTTGTGAAAGGAGAGTGATATGAGAATTTTTCTTTTGGGCTTTGTCTTGGGTGTCTACACTTTTGTGAGCTCATCAAAGAAATCACTATCTTTGGGACTTTTAGGTTTACATTGTCTATGTTCTTGAAGTATCAATATTAATCTGTGTTACTTATACAAAGATATTGTCGCATAAGTACAATAACATCTGATACAATTTGCAATTTCATCTTGCCAGAAGTATACAATAAAACTGTTATATTCTCTTTCTTTCTTTCTTTCATTCTTTCTTTCTTTCTTTCTTTATTTATTTATTTATTATTATTATTATTATTATTATTTTTAGGCTATAAAACGTATTATCTTGATAACATATAATGTTAGAACTCAATTGTCTTGATAATTTCTTCTGTGCCTATACCTGTAAAGATAATAGTCTACTCTATTTCTTGCTTAACTCGCAGATGACCGTCAATTACATGAATGGGCAACAGAACAACATGTTTCTGCAGAGATATGGTTTTTCATCTCCTGTGGTAACTTGATCTGAAGCACTTCTCGAAAATATTTGAGTTTATGATGCGATTTATTTCAATTCATGTGCAGAAGAAGATTGTGTTTCCTTAAAAAAAGCGTATTTACTACTTGAGTAGCACACTGAATCAAGGCACCAGTGTGCTAGATCTCTTTCATCGCAAATTTGGAAATTTCCATTCAACTTCCTGCTCTATTATCATTGACATGAATCTGGTCTTTGTAATGTATGATTTTAACATCTAACTTCGGGAACTGCAGAACCCTTGGGACATGATCAAGTTCTCCAGTAATGCACGTATTCACTTAGATTCATTCTTATCAGTTTTCAATATAGCTGGGCTTCCTGAAAACTACTACTACAATGGTATGGTTAATGAGAACTTTCTTACATTTACCTCTTTTATAGAGGGGAAAAAAACTCTCTTAGTAATGCAATGAAGTGCTGAACAAACTGACAAAATAATGATAGCAGGTCGGTTATCTAACGAGGAAGATACATTCGTGGATGGAGCAGTAATTGCAGCAGCAAGATCTCTGCCTTCATGGTCAGATGGGGATATCCCACCAAGCCCAAGCAGGGAGAGGAAAGCAGTTAAAGAGCTACAAGAAGAGTGCCGACAGATGCTCGCAGCATTTCCGACCACAACAGAAAAAGACCAAAAAATGCTAGGTACGCCATGCAGTCCTTGCCTTCTCCCAAAGTTAACTGCCTCTCTCGCTTATAGGATAACTGGTGAATGGCCAAAAACCCAAAGCGACTTCTAAAACCATTGAGAAAAAAACTCTTAAGATCTTATATTTTAAGATATTAATATCTTGTTGTGCTGCTGTTTGAAACAACTAACAGATTCAATGCCACAAGCTACTAGGGCGCTAGAAGCCTCGATCAAGTACACATTATCTTCTTCCTTCTTAAGCTAATTATATGATTTTAATGGAGATTCTTGAAGTTCCCATTTGTGCTCATGGCTAACAATGGAGGTTTTGCCCCCTGCAGATACAGATTGCACCGAAAGTTGTTCATTGAGAAAGTCATCAAGGCATTGGATGTTTATCAAGAGCGGATACTCTTCTAGTTTTGAAGTTTTTCTACTGCAATTTGATCTTAGGAGATATTATTGGTAGCTGCATGAAATTATCTTCAGTCCTTGTAAAGATATTGCTGTAGCTACATTAATTTCATGAAGTAAATTCAGTTATTAGTCATAGGAGTTTAATTAATTTTAGCATCAATGATAAAAAAACTTGATAATCTTGAATGGTTGCATCTTAGTTATTATAGAGCCGCATAGATTATGTTCTATTTCTTAATTGTAGTCTAATTCTGCAAATATACATTCTAAAATATATAAATAAACTTCTTGGCGATGTTTTGTGAATATGAGGGAAATTTTTGAAGTTCATAGCCGAACCGAAGAATCAGATCATCTTGCACAAAGTTAAGTTGGATTAATTCATAAGTTGAAAATTGAATAAACTAATTAAAAAAAAAAATTACCTAGGTTGGCGTAGTAGTAAAAAAGGTATATAATTTCAATAAATAGTTAAGAAGTCATGAGTTTTCTTGACATCCAAAAATAATAATAAAAAAAAAAATTATTTTAAATGACAAAATTGATAGAATAATTACAAATATAGTAAAATTTTATATTCTATATGTGATATACGGCAATAAACTTAGATATATATCACATAAAAAAAAGTAAAATTTTATTATATTTATAATAGTAAAATTTTATTATCTTTATAATTATTTTGAACAGTTTTTCATATTCAAAACCATTCCTAATAATATTATTATTTTTTCTTGGTGGTCAATTGTCATTTCTTTCGAATTGTGAATGTTGGTTCGTTTCCGGTTTATGCAAAACTTAAGAAAACCAAACCAAACCAAACCAAGGTTTACTCACGGAAAGGGGTTTTAAGTAAAAAATGACTCTGTACTCAGCTGATGATCTCTGGACGCTCTCCACCCTAGACGGCGGCGGCGACTACCTCCTCCACCAATCGCACTTGCTAGTTTTACACTATCGGTCTTTCTCTGTCACTGGTATGTCGATTTTTGCCTTGATTTTGTGTATTTCATTGACACTCACTTTCATTTACTATATTTCTATTGCATATTATGTTTATGAAAACGAAATGAAAGAAGTAAACCTAAACATCTTTCTTCCCCTCACTTCTGCTTTCACCCTCTTTCATCCTTGCCGCAGTCAATTCCGACGAATTTTGGATGGAAGTCTTCTTTTTATAATGAAAACAAGATTTCAAATCATTTTGGCCTAATTCGAAATCAAACTATTTTTGGAATAGGGTCCTCCGAGGATTAGATGATGAACTTGAGGTTCAGCATTGTGATGTGAATCAATGCACAGCGAGTTTTTCTTCTTGACTAAGCTTTGAACTTGTCTAAACCTGCTGATACATCTAAGTTACATTATTGTTATTGAGATAATTATCGCATGTCAATTCTAATATCTGGATTATCTCTTGTGAGAACAGATTTGTGGGATTGAGCCAGTCATTTTGATTGTCTTGCAAATTCTTATTGGTAATAGGAACACTATGGCTTCAATTTTTGTTCTATTCTCGTACACTTTTTATAATACGAAACTATTAATTATTATACTGTGTGGTCTAGAGCAATTTAAAATGACCCGTTTGGATGCACTGTCAAGCAGTCTGAAGTGTTTAGTTTATGAGCTCTGAAGCTTCATTGTCGAATCTGATATTTTGTATGATTTTTCATTTTCTTTACTTAATAGTTCTTTGGAATTAAGAATTAGGGATTGGGAACCAATAAGATTTTCATATTACTGGACACTTTATACTCCCAAGAAAGTATTGACATCGCAGTTGGAACTTTCTATTTGAAGGTTGGACAAAAGGCCCATTTACATTTTTTGTAATCTTTGTCTGATGGGATGTACTAATTCACCAGTTGAAGCTTCTAATGCTAAAGACATGTTTTAGCATTACTTTCTTTGAAAATTAAAATCCCCTGAGTGTTCCCTTGGTTATGAACGTAGGGATTACCGGAAGAGAGGATGGCTACTAATAGCCTGAAGAGTATGGTTGTCGCAGCAGTCAATAAGGGAGTGACAGAAGCAAGGGCAAGGATATTTGGTCACATACTTAACCCAACAGGTCAACGGTCTACCCACAAGCTTCTGCGCAAAAAACTCATTGGTGACAAAGTAGCACAGTGGTATCCATATGATATCAAGAAGGATGATCCTCTTGTCATGGCTCGTCAAGAACAAGAGTACACTCTCTTTCTATTTCTGACTTTGCAATGAGCTAGACATAACCATTTCAACGAAATTTTATGCATCAGATGTATATTTTCTCTGTCAATATACTGAGTGATATTAGGATAAGGAGTGATTTGTAGAAAGGCCATATGTGTTTAACATGGAAAATGGGGGGATAAGGCTTGTGCATGAGTTCTCCTGCATCTTTTGAAATCATAAATTTATGCTTTAGAAACGTACCTTCATGTGGGAAGTGGGAACTTGAGGTATACACACATTACTATGTGAATTTTCTGGTTAAAGAAAATAGGTTTCAATTCAACAGTGCATTCTTTTTTTTGGAAAAAAAAAAACAAATTTGGGGGTGTGGATTCAAATTTCCAAGCTCAAGGGAAATATGCTTTCTATACCTTAAGGTTAGGATCAATGCTATTTTGGAGGAGGTCAACATGAGAGTGCGGTTTAGTAACTGAGTTTCACATGTTTCTAGAGAGATGTTACCTTCTTTAATGAGGGCCACAGCTTATCTGGGTTTTTAGTTGCATGTCAATTACCAGAGCTTTTAAAAGGTACAAACTGGTGGTTAATTTTATATCTTGTTGTTGTTCTGTTTCTGCCCTGTAGTTGCTTTTAAAAGGTACAAACTGGTGGTTAATTTTATATCTTGTTGTTGTTCTGTTTCTGCCCTGTAGTTTATCTTTCTGTGCATAGATTTGTCCTAGTATTCTAATTTTCTGCCATCTACCTTGCTAGGCGCTTGTCCAAGCTTGAAATGCTAAAGCGTCGTGGTAAGGGACCACCTAAGAAGGGCCAAGGTAGGCGTGCGGCCAAGCGCAACAAGTAGAGCCAGTGACGGTGGAATAGTTCCTGCCAGTTATTTTTGTTGTTTTTTCTTACCTAAGTTTAGGTTATGGACCAGGTTCCTCATGGTTGTAATGACTTGTATTCATTATGATTATTATTTTCTTTGAATGTATTTCGTTCAAGCAAATTAGTGCATACTATATTTGGAAAAGGCCTGTAATAAATGGCGCAATGCATAATCTGGAAACACGAAAAGCAGTAATACAACAATACACCTCTATGTAGGAAAGAACCAGTCGCTAGAATTCCTTACCAGGTTCAAGATCAAACAAACTGGATATTGATACATATATTTCTTCACTAGAGCTTCCTTACATGGGAAAAAAAAAATCCATATGACTGCAAATATCAGGTTCAAGTATGATAATTCGATTGCCTTGGAACTGAAATCCAATTTATTTTCCACCCTGTTCTAAATCTAAGGCCCTGCACTAGGCGTGGTTTCTTCATTAACCTTCTTTGGGGTAATTAACCTGTCTTGTTGATGAGCCATATCATACGTTGCATGAAGACCAAAGAAAACATAATAGATAAGCATCACCAATGTGCAGATTCCAAATCTTTCAAAAGCCTCAGGACCCAAAGATCCCATGAGAAAGATGTTCGTTGCAATCGACAAACTTGGCAGCCATGGCACCAATGGCACGCCCCAAACTTTCGGCTTTCTTTGCATTGGCAGAAGCAATGCAATCCCCAAAGTCCCCAGAAACCAAATCGGGACGGTCACGATGTATCCTATCCAACCATTCGGATAAAGCCCCCAGTATGCAGAAGTTGCCATGGAGGAACCAATGATGGTCATCAGGAGAATGAAAAGCTTCAACTGGTCTATCCGTGGCGTGACCCCTCTCGCATAATATCTCCTTACCAGAAGCGCCACAGCCATCATCATGAAGACGAACAGCGTGCTGACCGACAACAAGCTAGCCAGAATATCCAAGCTAGAGAAGAAAGCAATACAGCCACCTGCTATGGTAATCAATAGTGTAGCGTTGATGGGAGTTCCAGTCTTTGGATGGACAAGAGCAAACCAAGGAGGAATCATGTGAGCTCGAGCAATGTGAGTCGTATACCGAGCTTGCCCGAGCGCCCCAACAAGAAGAACAGTAGTCATCCCCTTCAAAGCACCAAGAGCCACCAAATACTTGGCCCATTTCATTCCAACCCTCTCAAAAGCAACAGAGTAAGCTGCATCTGGGTTTATATCAGTATACTTCTGCATCATACTAAGCGACAATGCCATCAAGCAGTATATCACAGTGATAATCGACATTGATCCCAACAATCCCAAAGGTATGTCTTTTGATGGATTTTTAGTTTCCTCAGCCATTGTAGCAATGTTATCAAAACCTCCATAAGCAAAGTAAACAATTGCAGCAGCTTGGAAGACACCTTTAGCTCCAAAAGGCATAAAAGGAGTCAAATTTGATTTATCAGCATGTACAAAACCTGCAATTATAACAAACAGAATCACAACTGTATTAACAGCTGAAGCAATCCAATTCAGGTATGAAGTTTTTCTCGTGCTGGTCATCGCTATCATCGCAGCGATCGCTAAAACCGCAACAGCAATGGGGTCAAGAAGATTGAATCCATCTTTGAGATTCGTGTGGATACGCAACGAGTTGTCGGGTCGGTCTAGAAGCGAGGTAAAGTACGAAGTCCAAGCTCGAGCGACGGCGGCAGTACCGACAATGCTCTCGAGGAGAATGTTGCCTGCAGTAATGAAAGCTGCAAAGTCCCCCAATTCAATTCTTAAGTATGCAAAAGAGCCCCCAGCAACTGGGATTTCAATAGCGAACTCTGTATAGCAGAAAACGGAGAGCATTGCAGAAATGCCGGAAGCTACATAAGAAAGAACAATGGCTGGTCCAGCATGTTTGTTGGCTTCTTGGCCTGTGAGGACGAAGATTCCTGCACCAATTACAGCTCCAAATCCAAACCAAGTGAGATCCCACCAAGTAAGGCAACGTTTCATTTCATTCTCACTTCGTTTTCTAAGCTCCCCAATTTCATTTTCATCGAATGATCTGCTTTGAAGACGGTCCAGGAACCGAAACCATGTTTGTGACAGAGCAGTTCCGTAATTGCTCCAACTCTGAAAGGATTCTTCCGGTAAGAAATCTTGTTTGCTCCATCTCCACCAATAACTTCTCTGCTGCTGAACAATAGCTTCCCCCATCTTGCTTTCAATGGAAATGGGGAAATGGCAATGGTTTTCTTGGAATTAGTTCATCTGTATTGTTTGTTTCCACTGTTGC

mRNA sequence

ATGGCGAATTCCATCTCCTTCCATCAAACCACTCACCGCTTCATCCCCTGCCCGCAGGTCAAGGATTTCCGGTCCTTTTCGTCACCAAGATTCAGTTACTGTTCTTCCACTTCCTCTAAAGGCAGACTGCGGCCGATTAAAGCTGCTACCGAAATTCCCGCATTTCCTCTTCTTCAACCTCCCAAAGTGGACGAATCTCCTTCTGAGTTGGAACCAGCAGACCCTGACTTCTATAAGATAGGATATGTTAGAAGTATGCGAGCTTATGGAATTGAATTCAAAGAAGGACCCGATGGATTTGGTGTATATGCTTCCAAAGATGTTGAGCCTCTTCGCCGTGCTAGGGTAATCATGGAAATTCCTTTAGAACTAATGTTAACAATAAGCAAGAAACAACCGTGGATGTTTTTCCCTGATATAATTCCAGTGGGTCATCCAATATTTGATATAATTAACTCGACAAATCCAGAGACAGATTGGGATTTAAGGTTAGCGTGTCTTCTGTTGTATGCATTTGATCGAGAGGACAACTTTTGGCAGCTCTATGGTGATTTTCTACCAAGTTTTGACGAATGTACAAGCTTGCTTCTAGCCTCCGAGGAAGAAATTTTGGAGCTGCAGGATCAAAATCTTGCTTCCATCATCAGAGACCAGCAGCGTCGTGCTTTAGAGTTCTGGGAAAGGAACTGGCACAGTGGCGTACCTCTTAAAATTAAGAGGCTTGCTCAAGATCCTAAAAGATTCATTTGGGCTGTGAGTATAGCACAATCGCGATGCATAAACATGCAAACAAGGATCGGAGCCCTAGTACAAGATGCAAATATGCTAATTCCTTATGCTGATATGCTGAACCATTCTTTTCGGCCAAATTGTTTTTTTCACTGGCGTTTTAAGGATAGGATGCTTGAGGTGATGATAAATGCTGGGCAGCAGATCAAAAAAGGGCAAGAGATGACCGTCAATTACATGAATGGGCAACAGAACAACATGTTTCTGCAGAGATATGGTTTTTCATCTCCTGTGAACCCTTGGGACATGATCAAGTTCTCCAGTAATGCACGTATTCACTTAGATTCATTCTTATCAGTTTTCAATATAGCTGGGCTTCCTGAAAACTACTACTACAATGGTCGGTTATCTAACGAGGAAGATACATTCGTGGATGGAGCAGTAATTGCAGCAGCAAGATCTCTGCCTTCATGGTCAGATGGGGATATCCCACCAAGCCCAAGCAGGGAGAGGAAAGCAGTTAAAGAGCTACAAGAAGAGTGCCGACAGATGCTCGCAGCATTTCCGACCACAACAGAAAAAGACCAAAAAATGCTAGGTACGCCATGCAGTCCTTGCCTTCTCCCAAAGTTAACTGCCTCTCTCGCTTATAGGATAACTGCTGATGATCTCTGGACGCTCTCCACCCTAGACGGCGGCGGCGACTACCTCCTCCACCAATCGCACTTGCTAGTTTTACACTATCGGTCTTTCTCTGTCACTGCAGTCAATAAGGGAGTGACAGAAGCAAGGGCAAGGATATTTGGTCACATACTTAACCCAACAGGTCAACGGTCTACCCACAAGCTTCTGCGCAAAAAACTCATTGGTGACAAAGTAGCACAGTGGTATCCATATGATATCAAGAAGGATGATCCTCTTGTCATGGCTCGTCAAGAACAAGAGCGCTTGTCCAAGCTTGAAATGCTAAAGCGTCGTGGTAAGGGACCACCTAAGAAGGGCCAAGGTAGGCGTGCGGCCAAGCGCAACAAGTAGAGCCAGTGACGGTGGAATAGTTCCTGCCAGTTATTTTTGTTGTTTTTTCTTACCTAAGTTTAGGTTATGGACCAGGTTCCTCATGGTTGTAATGACTTGTATTCATTATGATTATTATTTTCTTTGAATGTATTTCGTTCAAGCAAATTAGTGCATACTATATTTGGAAAAGGCCTGTAATAAATGGCGCAATGCATAATCTGGAAACACGAAAAGCAGTAATACAACAATACACCTCTATGTAGGAAAGAACCAGTCGCTAGAATTCCTTACCAGGTTCAAGATCAAACAAACTGGATATTGATACATATATTTCTTCACTAGAGCTTCCTTACATGGGAAAAAAAAAATCCATATGACTGCAAATATCAGGTTCAAGTATGATAATTCGATTGCCTTGGAACTGAAATCCAATTTATTTTCCACCCTGTTCTAAATCTAAGGCCCTGCACTAGGCGTGGTTTCTTCATTAACCTTCTTTGGGGTAATTAACCTGTCTTGTTGATGAGCCATATCATACGTTGCATGAAGACCAAAGAAAACATAATAGATAAGCATCACCAATGTGCAGATTCCAAATCTTTCAAAAGCCTCAGGACCCAAAGATCCCATGAGAAAGATGTTCGTTGCAATCGACAAACTTGGCAGCCATGGCACCAATGGCACGCCCCAAACTTTCGGCTTTCTTTGCATTGGCAGAAGCAATGCAATCCCCAAAGTCCCCAGAAACCAAATCGGGACGGTCACGATGTATCCTATCCAACCATTCGGATAAAGCCCCCAGTATGCAGAAGTTGCCATGGAGGAACCAATGATGGTCATCAGGAGAATGAAAAGCTTCAACTGGTCTATCCGTGGCGTGACCCCTCTCGCATAATATCTCCTTACCAGAAGCGCCACAGCCATCATCATGAAGACGAACAGCGTGCTGACCGACAACAAGCTAGCCAGAATATCCAAGCTAGAGAAGAAAGCAATACAGCCACCTGCTATGGTAATCAATAGTGTAGCGTTGATGGGAGTTCCAGTCTTTGGATGGACAAGAGCAAACCAAGGAGGAATCATGTGAGCTCGAGCAATGTGAGTCGTATACCGAGCTTGCCCGAGCGCCCCAACAAGAAGAACAGTAGTCATCCCCTTCAAAGCACCAAGAGCCACCAAATACTTGGCCCATTTCATTCCAACCCTCTCAAAAGCAACAGAGTAAGCTGCATCTGGGTTTATATCAGTATACTTCTGCATCATACTAAGCGACAATGCCATCAAGCAGTATATCACAGTGATAATCGACATTGATCCCAACAATCCCAAAGGTATGTCTTTTGATGGATTTTTAGTTTCCTCAGCCATTGTAGCAATGTTATCAAAACCTCCATAAGCAAAGTAAACAATTGCAGCAGCTTGGAAGACACCTTTAGCTCCAAAAGGCATAAAAGGAGTCAAATTTGATTTATCAGCATGTACAAAACCTGCAATTATAACAAACAGAATCACAACTGTATTAACAGCTGAAGCAATCCAATTCAGGTATGAAGTTTTTCTCGTGCTGGTCATCGCTATCATCGCAGCGATCGCTAAAACCGCAACAGCAATGGGGTCAAGAAGATTGAATCCATCTTTGAGATTCGTGTGGATACGCAACGAGTTGTCGGGTCGGTCTAGAAGCGAGGTAAAGTACGAAGTCCAAGCTCGAGCGACGGCGGCAGTACCGACAATGCTCTCGAGGAGAATGTTGCCTGCAGTAATGAAAGCTGCAAAGTCCCCCAATTCAATTCTTAAGTATGCAAAAGAGCCCCCAGCAACTGGGATTTCAATAGCGAACTCTGTATAGCAGAAAACGGAGAGCATTGCAGAAATGCCGGAAGCTACATAAGAAAGAACAATGGCTGGTCCAGCATGTTTGTTGGCTTCTTGGCCTGTGAGGACGAAGATTCCTGCACCAATTACAGCTCCAAATCCAAACCAAGTGAGATCCCACCAAGTAAGGCAACGTTTCATTTCATTCTCACTTCGTTTTCTAAGCTCCCCAATTTCATTTTCATCGAATGATCTGCTTTGAAGACGGTCCAGGAACCGAAACCATGTTTGTGACAGAGCAGTTCCGTAATTGCTCCAACTCTGAAAGGATTCTTCCGGTAAGAAATCTTGTTTGCTCCATCTCCACCAATAACTTCTCTGCTGCTGAACAATAGCTTCCCCCATCTTGCTTTCAATGGAAATGGGGAAATGGCAATGGTTTTCTTGGAATTAGTTCATCTGTATTGTTTGTTTCCACTGTTGC

Coding sequence (CDS)

ATGGCGAATTCCATCTCCTTCCATCAAACCACTCACCGCTTCATCCCCTGCCCGCAGGTCAAGGATTTCCGGTCCTTTTCGTCACCAAGATTCAGTTACTGTTCTTCCACTTCCTCTAAAGGCAGACTGCGGCCGATTAAAGCTGCTACCGAAATTCCCGCATTTCCTCTTCTTCAACCTCCCAAAGTGGACGAATCTCCTTCTGAGTTGGAACCAGCAGACCCTGACTTCTATAAGATAGGATATGTTAGAAGTATGCGAGCTTATGGAATTGAATTCAAAGAAGGACCCGATGGATTTGGTGTATATGCTTCCAAAGATGTTGAGCCTCTTCGCCGTGCTAGGGTAATCATGGAAATTCCTTTAGAACTAATGTTAACAATAAGCAAGAAACAACCGTGGATGTTTTTCCCTGATATAATTCCAGTGGGTCATCCAATATTTGATATAATTAACTCGACAAATCCAGAGACAGATTGGGATTTAAGGTTAGCGTGTCTTCTGTTGTATGCATTTGATCGAGAGGACAACTTTTGGCAGCTCTATGGTGATTTTCTACCAAGTTTTGACGAATGTACAAGCTTGCTTCTAGCCTCCGAGGAAGAAATTTTGGAGCTGCAGGATCAAAATCTTGCTTCCATCATCAGAGACCAGCAGCGTCGTGCTTTAGAGTTCTGGGAAAGGAACTGGCACAGTGGCGTACCTCTTAAAATTAAGAGGCTTGCTCAAGATCCTAAAAGATTCATTTGGGCTGTGAGTATAGCACAATCGCGATGCATAAACATGCAAACAAGGATCGGAGCCCTAGTACAAGATGCAAATATGCTAATTCCTTATGCTGATATGCTGAACCATTCTTTTCGGCCAAATTGTTTTTTTCACTGGCGTTTTAAGGATAGGATGCTTGAGGTGATGATAAATGCTGGGCAGCAGATCAAAAAAGGGCAAGAGATGACCGTCAATTACATGAATGGGCAACAGAACAACATGTTTCTGCAGAGATATGGTTTTTCATCTCCTGTGAACCCTTGGGACATGATCAAGTTCTCCAGTAATGCACGTATTCACTTAGATTCATTCTTATCAGTTTTCAATATAGCTGGGCTTCCTGAAAACTACTACTACAATGGTCGGTTATCTAACGAGGAAGATACATTCGTGGATGGAGCAGTAATTGCAGCAGCAAGATCTCTGCCTTCATGGTCAGATGGGGATATCCCACCAAGCCCAAGCAGGGAGAGGAAAGCAGTTAAAGAGCTACAAGAAGAGTGCCGACAGATGCTCGCAGCATTTCCGACCACAACAGAAAAAGACCAAAAAATGCTAGGTACGCCATGCAGTCCTTGCCTTCTCCCAAAGTTAACTGCCTCTCTCGCTTATAGGATAACTGCTGATGATCTCTGGACGCTCTCCACCCTAGACGGCGGCGGCGACTACCTCCTCCACCAATCGCACTTGCTAGTTTTACACTATCGGTCTTTCTCTGTCACTGCAGTCAATAAGGGAGTGACAGAAGCAAGGGCAAGGATATTTGGTCACATACTTAACCCAACAGGTCAACGGTCTACCCACAAGCTTCTGCGCAAAAAACTCATTGGTGACAAAGTAGCACAGTGGTATCCATATGATATCAAGAAGGATGATCCTCTTGTCATGGCTCGTCAAGAACAAGAGCGCTTGTCCAAGCTTGAAATGCTAAAGCGTCGTGGTAAGGGACCACCTAAGAAGGGCCAAGGTAGGCGTGCGGCCAAGCGCAACAAGTAG

Protein sequence

MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAATEIPAFPLLQPPKVDESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEIPLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNFWQLYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKIKRLAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKDRMLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLDSFLSVFNIAGLPENYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECRQMLAAFPTTTEKDQKMLGTPCSPCLLPKLTASLAYRITADDLWTLSTLDGGGDYLLHQSHLLVLHYRSFSVTAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVAQWYPYDIKKDDPLVMARQEQERLSKLEMLKRRGKGPPKKGQGRRAAKRNK

Homology

[Close]

BLAST of Clc03G04380 vs. NCBI nr
Match: KAA0055365.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 869.0 bits (2244), Expect = 2.3e-248
Identity = 420/452 (92.92%), Postives = 434/452 (96.02%), Query Frame = 0


Query: 1   MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAATEIPAFPLLQP 60
           MANSISFH  THRFI CPQVKDFRSF SPRF+Y SSTS K RLRPIKAAT +PAFPLLQP
Sbjct: 295 MANSISFHHPTHRFISCPQVKDFRSFPSPRFTYNSSTSPKTRLRPIKAATGLPAFPLLQP 354

Query: 61  PKVDESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120
           PK DESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI
Sbjct: 355 PKADESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 414

Query: 121 PLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNFWQ 180
           PLE+MLTIS+K PWMFFPDIIPVGHPIFDIINST+PETDWDLRLACLLLYAFDREDNFWQ
Sbjct: 415 PLEIMLTISQKLPWMFFPDIIPVGHPIFDIINSTDPETDWDLRLACLLLYAFDREDNFWQ 474

Query: 181 LYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKIKR 240
           LYGDFLPS DECTSLLLASEEE+ ELQDQNLAS IRDQQRRALEFWERNWHSGVPLKIKR
Sbjct: 475 LYGDFLPSIDECTSLLLASEEELSELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIKR 534

Query: 241 LAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKDR 300
           LA+DPKRFIWAVSIAQSRCINM+TRIGALVQ+ANMLIPYADMLNHSF PNCFFHWRFKDR
Sbjct: 535 LARDPKRFIWAVSIAQSRCINMETRIGALVQNANMLIPYADMLNHSFEPNCFFHWRFKDR 594

Query: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLDSF 360
           MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFS NA IHLDSF
Sbjct: 595 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSGNACIHLDSF 654

Query: 361 LSVFNIAGLPENYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 420
           LSVFNIAGLPENYYYNGRLS +EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL
Sbjct: 655 LSVFNIAGLPENYYYNGRLSKKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 714

Query: 421 QEECRQMLAAFPTTTEKDQKMLGTPCSPCLLP 453
           QEEC++MLAAFPTT+EKDQK+LGT CSPCLLP
Sbjct: 715 QEECQRMLAAFPTTSEKDQKLLGTLCSPCLLP 746

[Close]

BLAST of Clc03G04380 vs. NCBI nr
Match: XP_004154058.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis sativus] >KGN64454.1 hypothetical protein Csa_013765 [Cucumis sativus])

HSP 1 Score: 851.3 bits (2198), Expect = 5.0e-243
Identity = 416/462 (90.04%), Postives = 436/462 (94.37%), Query Frame = 0


Query: 1   MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAATEIPAFPLLQP 60
           MANSISFHQ THRFI CPQVKDFRSF SPRF+  SS S K RLRPIKAAT IPAFPLLQP
Sbjct: 1   MANSISFHQPTHRFISCPQVKDFRSFPSPRFTNNSSISPKARLRPIKAATGIPAFPLLQP 60

Query: 61  PKVDESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120
           PK DESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI
Sbjct: 61  PKADESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120

Query: 121 PLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNFWQ 180
           PLELMLTIS+K PWMFFPDIIP+GHPIFDIINSTNPETDWDLRLACLLLYAFDR+DNFWQ
Sbjct: 121 PLELMLTISQKLPWMFFPDIIPLGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFWQ 180

Query: 181 LYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKIKR 240
           LYGDFLPS DECTSLLLASEEE+LELQDQNLAS IRDQQRRALEFWERNWHSGVPLKIKR
Sbjct: 181 LYGDFLPSIDECTSLLLASEEELLELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIKR 240

Query: 241 LAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKDR 300
           LA+DPKRFIWA+SIAQSRCINM+TRIGALVQ+ANMLIPYADMLNHSF+PNCFFHWRFKDR
Sbjct: 241 LARDPKRFIWALSIAQSRCINMETRIGALVQNANMLIPYADMLNHSFQPNCFFHWRFKDR 300

Query: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLDSF 360
           MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMI+FSSNA IHLDSF
Sbjct: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIEFSSNACIHLDSF 360

Query: 361 LSVFNIAGLPENYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 420
           LSVFNIAGLPENYYYNGRLS++EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL
Sbjct: 361 LSVFNIAGLPENYYYNGRLSSKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 420

Query: 421 QEECRQMLAAFPTTTEKDQKMLGTPCSPCLLPKLTASLAYRI 463
           QEEC++MLAAFPTT++KDQKML +         L AS+ YR+
Sbjct: 421 QEECQRMLAAFPTTSDKDQKMLDSMSQ--ATRTLEASIKYRL 460

[Close]

BLAST of Clc03G04380 vs. NCBI nr
Match: XP_008440293.1 (PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis melo])

HSP 1 Score: 850.5 bits (2196), Expect = 8.6e-243
Identity = 415/462 (89.83%), Postives = 433/462 (93.72%), Query Frame = 0


Query: 1   MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAATEIPAFPLLQP 60
           MANSISFH  THRFI CPQVKDFRSF SPRF+Y SSTS K RLRPIKAAT +PAFPLLQP
Sbjct: 1   MANSISFHHPTHRFISCPQVKDFRSFPSPRFTYNSSTSPKTRLRPIKAATGLPAFPLLQP 60

Query: 61  PKVDESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120
           PK DESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI
Sbjct: 61  PKADESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120

Query: 121 PLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNFWQ 180
           PLE+MLTIS+K PWMFFPDIIPVGHPIFDIINST+PETDWDLRLACLLLYAFDREDNFWQ
Sbjct: 121 PLEIMLTISQKLPWMFFPDIIPVGHPIFDIINSTDPETDWDLRLACLLLYAFDREDNFWQ 180

Query: 181 LYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKIKR 240
           LYGDFLPS DECTSLLLASEEE+ ELQDQNLAS IRDQQRRALEFWERNWHSGVPLKIKR
Sbjct: 181 LYGDFLPSIDECTSLLLASEEELSELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIKR 240

Query: 241 LAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKDR 300
           LA+DPKRFIWAVSIAQSRCINM+TRIGALVQ+ANMLIPYADM+NHSF PNCFFHWRFKDR
Sbjct: 241 LARDPKRFIWAVSIAQSRCINMETRIGALVQNANMLIPYADMMNHSFEPNCFFHWRFKDR 300

Query: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLDSF 360
           MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFS NA IHLDSF
Sbjct: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSGNACIHLDSF 360

Query: 361 LSVFNIAGLPENYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 420
           LSVFNIAGLPENYYYNGRLS +EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL
Sbjct: 361 LSVFNIAGLPENYYYNGRLSKKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 420

Query: 421 QEECRQMLAAFPTTTEKDQKMLGTPCSPCLLPKLTASLAYRI 463
           QEEC++MLAAFPTT+EKDQK+L +         L AS+ YR+
Sbjct: 421 QEECQRMLAAFPTTSEKDQKLLDSMSQ--ATRTLEASIKYRL 460

[Close]

BLAST of Clc03G04380 vs. NCBI nr
Match: TYJ99292.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 850.5 bits (2196), Expect = 8.6e-243
Identity = 419/487 (86.04%), Postives = 434/487 (89.12%), Query Frame = 0


Query: 1   MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAATEIPAFPLLQP 60
           MANSISFH  THRFI CPQVKDFRSF SPRF+Y SSTS K RLRPIKAAT +PAFPLLQP
Sbjct: 295 MANSISFHHPTHRFISCPQVKDFRSFPSPRFTYNSSTSPKTRLRPIKAATGLPAFPLLQP 354

Query: 61  PKVDESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120
           PK DESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI
Sbjct: 355 PKADESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 414

Query: 121 PLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNFWQ 180
           PLE+MLTIS+K PWMFFPDIIPVGHPIFDIINST+PETDWDLRLACLLLYAFDREDNFWQ
Sbjct: 415 PLEIMLTISQKLPWMFFPDIIPVGHPIFDIINSTDPETDWDLRLACLLLYAFDREDNFWQ 474

Query: 181 LYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKIKR 240
           LYGDFLPS DECTSLLLASEEE+ ELQDQNLAS IRDQQRRALEFWERNWHSGVPLKIKR
Sbjct: 475 LYGDFLPSIDECTSLLLASEEELSELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIKR 534

Query: 241 LAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKDR 300
           LA+DPKRFIWAVSIAQSRCINM+TRIGALVQ+ANMLIPYADM+NHSF PNCFFHWRFKDR
Sbjct: 535 LARDPKRFIWAVSIAQSRCINMETRIGALVQNANMLIPYADMMNHSFEPNCFFHWRFKDR 594

Query: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLDSF 360
           MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFS NA IHLDSF
Sbjct: 595 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSGNACIHLDSF 654

Query: 361 LSVFNIAGLPENYYYN-----------------------------------GRLSNEEDT 420
           LSVFNIAGLPENYYYN                                   GRLS +EDT
Sbjct: 655 LSVFNIAGLPENYYYNGMVVENFPFVCLFYKGKKLLVIQQSTEQTDKIAIAGRLSKKEDT 714

Query: 421 FVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECRQMLAAFPTTTEKDQKMLGTP 453
           FVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEEC++MLAAFPTT+EKDQK+LGT 
Sbjct: 715 FVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSEKDQKLLGTL 774

[Close]

BLAST of Clc03G04380 vs. NCBI nr
Match: XP_038876974.1 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Benincasa hispida])

HSP 1 Score: 847.8 bits (2189), Expect = 5.5e-242
Identity = 413/462 (89.39%), Postives = 434/462 (93.94%), Query Frame = 0


Query: 1   MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAATEIPAFPLLQP 60
           MANSISFHQ THRF+ CPQ KDFRSF   RFS  SSTS + RLRPIKAATEIPAFPLLQP
Sbjct: 1   MANSISFHQPTHRFMSCPQAKDFRSFPLSRFSNYSSTSPRSRLRPIKAATEIPAFPLLQP 60

Query: 61  PKVDESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120
           PK DESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI
Sbjct: 61  PKADESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120

Query: 121 PLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNFWQ 180
           PLELMLTIS+K PWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDRE+NFWQ
Sbjct: 121 PLELMLTISQKLPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREENFWQ 180

Query: 181 LYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKIKR 240
           LYGDFLPS DECTSLLLASEEE+LELQDQNLAS IRDQQRR LEFWERNWHSGVPLKIKR
Sbjct: 181 LYGDFLPSIDECTSLLLASEEELLELQDQNLASTIRDQQRRVLEFWERNWHSGVPLKIKR 240

Query: 241 LAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKDR 300
           LA+DPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSF+PNCFFHWRFKDR
Sbjct: 241 LAKDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFQPNCFFHWRFKDR 300

Query: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLDSF 360
           MLEVMINAGQQIKKGQEMT+NYMNGQ+N+MFLQRYGFSSPVNPWD I+FSSNARIHLDSF
Sbjct: 301 MLEVMINAGQQIKKGQEMTINYMNGQKNHMFLQRYGFSSPVNPWDRIEFSSNARIHLDSF 360

Query: 361 LSVFNIAGLPENYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 420
           LSVFNIAGLPENYYYNGRLS++EDTFVDGAVIAAARSLPSWSDGDIPPSPSRE+KAVKEL
Sbjct: 361 LSVFNIAGLPENYYYNGRLSDKEDTFVDGAVIAAARSLPSWSDGDIPPSPSREKKAVKEL 420

Query: 421 QEECRQMLAAFPTTTEKDQKMLGTPCSPCLLPKLTASLAYRI 463
           QEEC++MLAAFPTT+EKDQK+L +         L AS+ YR+
Sbjct: 421 QEECQRMLAAFPTTSEKDQKLLDSMSQ--ATRTLEASIKYRL 460

[Close]

BLAST of Clc03G04380 vs. ExPASy Swiss-Prot
Match: Q84JF5 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Arabidopsis thaliana OX=3702 GN=PTAC14 PE=1 SV=1)

HSP 1 Score: 653.3 bits (1684), Expect = 2.6e-186
Identity = 316/444 (71.17%), Postives = 374/444 (84.23%), Query Frame = 0


Query: 1   MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAAT-EIPAFPLLQ 60
           MA+S+S    T+ FI  PQ       S+PR         +  +RPIK A+ E   FPL Q
Sbjct: 1   MASSVSLQFLTNTFISKPQGFCNGIVSAPRPRSNLLRDRQNGVRPIKVASIETQPFPLFQ 60

Query: 61  PPKVDE-SPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIM 120
            P  +E S SELE ADPDFYKIGYVRS+RAYG+EFKEGPDGFGVYASKD+EP RRARVIM
Sbjct: 61  SPASEESSSSELETADPDFYKIGYVRSVRAYGVEFKEGPDGFGVYASKDIEPRRRARVIM 120

Query: 121 EIPLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNF 180
           EIPLELM+TI +K PWMFFPDI+P+GHPIFDIINST+PE DWD+RLACLLL++FDR+D+F
Sbjct: 121 EIPLELMITIRQKHPWMFFPDIVPIGHPIFDIINSTDPEIDWDIRLACLLLFSFDRDDHF 180

Query: 181 WQLYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKI 240
           W+LYGDFLP+ DEC+SLLLA+EE++ ELQD +L S IR QQ+R L+FWE+NWHSGVPLKI
Sbjct: 181 WRLYGDFLPAADECSSLLLATEEDLAELQDPDLVSTIRQQQKRILDFWEKNWHSGVPLKI 240

Query: 241 KRLAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFK 300
           KRLA+DP+RFIWAVS+AQ+RCI+MQTR+GALVQ+ NM+IPYADMLNHSF PNCF HWR K
Sbjct: 241 KRLAEDPERFIWAVSMAQTRCISMQTRVGALVQELNMMIPYADMLNHSFEPNCFLHWRPK 300

Query: 301 DRMLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLD 360
           DRMLEVM NAGQ IKKG+EMT+NYM GQ+NNM ++RYGFS+PVNPWD IKFS ++RIHL+
Sbjct: 301 DRMLEVMSNAGQDIKKGEEMTINYMPGQKNNMLMERYGFSTPVNPWDAIKFSGDSRIHLN 360

Query: 361 SFLSVFNIAGLPENYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVK 420
           SFLSVFNI GLPE YY++  LS   DTFVDGAVIAAAR+LP+WSD D+PP PS ERKAVK
Sbjct: 361 SFLSVFNIYGLPEEYYHDSELS-RGDTFVDGAVIAAARTLPTWSDIDLPPIPSAERKAVK 420

Query: 421 ELQEECRQMLAAFPTTTEKDQKML 443
           ELQ+ECR+MLA +PTT E+DQK+L
Sbjct: 421 ELQDECRKMLAEYPTTAEQDQKLL 443

[Close]

BLAST of Clc03G04380 vs. ExPASy Swiss-Prot
Match: P53305 (Mitochondrial 37S ribosomal protein S27 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RSM27 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 5.1e-04
Identity = 37/90 (41.11%), Postives = 48/90 (53.33%), Query Frame = 0


Query: 503 VTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVAQWYPY-DIKK--------DDPLVMA 562
           V E  A+IF    NP+G R+  K+L ++L G  VA +Y   DI K         D   + 
Sbjct: 11  VAELSAKIFDQNFNPSGIRTGSKILNERLKGPSVASYYGNPDILKFRHLKTLYPDIEFVD 70

Query: 563 RQEQERLSKLEMLKRRGKGPPKKGQGRRAA 584
            +EQ RLS +E  KRRGKG PKK +   AA
Sbjct: 71  LEEQYRLSMVEAKKRRGKGAPKKMKKDAAA 100

[Close]

BLAST of Clc03G04380 vs. ExPASy TrEMBL
Match: A0A5A7UP05 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002100 PE=4 SV=1)

HSP 1 Score: 869.0 bits (2244), Expect = 1.1e-248
Identity = 420/452 (92.92%), Postives = 434/452 (96.02%), Query Frame = 0


Query: 1   MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAATEIPAFPLLQP 60
           MANSISFH  THRFI CPQVKDFRSF SPRF+Y SSTS K RLRPIKAAT +PAFPLLQP
Sbjct: 295 MANSISFHHPTHRFISCPQVKDFRSFPSPRFTYNSSTSPKTRLRPIKAATGLPAFPLLQP 354

Query: 61  PKVDESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120
           PK DESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI
Sbjct: 355 PKADESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 414

Query: 121 PLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNFWQ 180
           PLE+MLTIS+K PWMFFPDIIPVGHPIFDIINST+PETDWDLRLACLLLYAFDREDNFWQ
Sbjct: 415 PLEIMLTISQKLPWMFFPDIIPVGHPIFDIINSTDPETDWDLRLACLLLYAFDREDNFWQ 474

Query: 181 LYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKIKR 240
           LYGDFLPS DECTSLLLASEEE+ ELQDQNLAS IRDQQRRALEFWERNWHSGVPLKIKR
Sbjct: 475 LYGDFLPSIDECTSLLLASEEELSELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIKR 534

Query: 241 LAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKDR 300
           LA+DPKRFIWAVSIAQSRCINM+TRIGALVQ+ANMLIPYADMLNHSF PNCFFHWRFKDR
Sbjct: 535 LARDPKRFIWAVSIAQSRCINMETRIGALVQNANMLIPYADMLNHSFEPNCFFHWRFKDR 594

Query: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLDSF 360
           MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFS NA IHLDSF
Sbjct: 595 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSGNACIHLDSF 654

Query: 361 LSVFNIAGLPENYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 420
           LSVFNIAGLPENYYYNGRLS +EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL
Sbjct: 655 LSVFNIAGLPENYYYNGRLSKKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 714

Query: 421 QEECRQMLAAFPTTTEKDQKMLGTPCSPCLLP 453
           QEEC++MLAAFPTT+EKDQK+LGT CSPCLLP
Sbjct: 715 QEECQRMLAAFPTTSEKDQKLLGTLCSPCLLP 746

[Close]

BLAST of Clc03G04380 vs. ExPASy TrEMBL
Match: A0A0A0LTZ8 (SET domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051910 PE=4 SV=1)

HSP 1 Score: 851.3 bits (2198), Expect = 2.4e-243
Identity = 416/462 (90.04%), Postives = 436/462 (94.37%), Query Frame = 0


Query: 1   MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAATEIPAFPLLQP 60
           MANSISFHQ THRFI CPQVKDFRSF SPRF+  SS S K RLRPIKAAT IPAFPLLQP
Sbjct: 1   MANSISFHQPTHRFISCPQVKDFRSFPSPRFTNNSSISPKARLRPIKAATGIPAFPLLQP 60

Query: 61  PKVDESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120
           PK DESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI
Sbjct: 61  PKADESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120

Query: 121 PLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNFWQ 180
           PLELMLTIS+K PWMFFPDIIP+GHPIFDIINSTNPETDWDLRLACLLLYAFDR+DNFWQ
Sbjct: 121 PLELMLTISQKLPWMFFPDIIPLGHPIFDIINSTNPETDWDLRLACLLLYAFDRDDNFWQ 180

Query: 181 LYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKIKR 240
           LYGDFLPS DECTSLLLASEEE+LELQDQNLAS IRDQQRRALEFWERNWHSGVPLKIKR
Sbjct: 181 LYGDFLPSIDECTSLLLASEEELLELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIKR 240

Query: 241 LAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKDR 300
           LA+DPKRFIWA+SIAQSRCINM+TRIGALVQ+ANMLIPYADMLNHSF+PNCFFHWRFKDR
Sbjct: 241 LARDPKRFIWALSIAQSRCINMETRIGALVQNANMLIPYADMLNHSFQPNCFFHWRFKDR 300

Query: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLDSF 360
           MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMI+FSSNA IHLDSF
Sbjct: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIEFSSNACIHLDSF 360

Query: 361 LSVFNIAGLPENYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 420
           LSVFNIAGLPENYYYNGRLS++EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL
Sbjct: 361 LSVFNIAGLPENYYYNGRLSSKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 420

Query: 421 QEECRQMLAAFPTTTEKDQKMLGTPCSPCLLPKLTASLAYRI 463
           QEEC++MLAAFPTT++KDQKML +         L AS+ YR+
Sbjct: 421 QEECQRMLAAFPTTSDKDQKMLDSMSQ--ATRTLEASIKYRL 460

[Close]

BLAST of Clc03G04380 vs. ExPASy TrEMBL
Match: A0A5D3BHR6 (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005050 PE=4 SV=1)

HSP 1 Score: 850.5 bits (2196), Expect = 4.1e-243
Identity = 419/487 (86.04%), Postives = 434/487 (89.12%), Query Frame = 0


Query: 1   MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAATEIPAFPLLQP 60
           MANSISFH  THRFI CPQVKDFRSF SPRF+Y SSTS K RLRPIKAAT +PAFPLLQP
Sbjct: 295 MANSISFHHPTHRFISCPQVKDFRSFPSPRFTYNSSTSPKTRLRPIKAATGLPAFPLLQP 354

Query: 61  PKVDESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120
           PK DESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI
Sbjct: 355 PKADESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 414

Query: 121 PLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNFWQ 180
           PLE+MLTIS+K PWMFFPDIIPVGHPIFDIINST+PETDWDLRLACLLLYAFDREDNFWQ
Sbjct: 415 PLEIMLTISQKLPWMFFPDIIPVGHPIFDIINSTDPETDWDLRLACLLLYAFDREDNFWQ 474

Query: 181 LYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKIKR 240
           LYGDFLPS DECTSLLLASEEE+ ELQDQNLAS IRDQQRRALEFWERNWHSGVPLKIKR
Sbjct: 475 LYGDFLPSIDECTSLLLASEEELSELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIKR 534

Query: 241 LAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKDR 300
           LA+DPKRFIWAVSIAQSRCINM+TRIGALVQ+ANMLIPYADM+NHSF PNCFFHWRFKDR
Sbjct: 535 LARDPKRFIWAVSIAQSRCINMETRIGALVQNANMLIPYADMMNHSFEPNCFFHWRFKDR 594

Query: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLDSF 360
           MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFS NA IHLDSF
Sbjct: 595 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSGNACIHLDSF 654

Query: 361 LSVFNIAGLPENYYYN-----------------------------------GRLSNEEDT 420
           LSVFNIAGLPENYYYN                                   GRLS +EDT
Sbjct: 655 LSVFNIAGLPENYYYNGMVVENFPFVCLFYKGKKLLVIQQSTEQTDKIAIAGRLSKKEDT 714

Query: 421 FVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECRQMLAAFPTTTEKDQKMLGTP 453
           FVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEEC++MLAAFPTT+EKDQK+LGT 
Sbjct: 715 FVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKELQEECQRMLAAFPTTSEKDQKLLGTL 774

[Close]

BLAST of Clc03G04380 vs. ExPASy TrEMBL
Match: A0A1S3B1I5 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484777 PE=4 SV=1)

HSP 1 Score: 850.5 bits (2196), Expect = 4.1e-243
Identity = 415/462 (89.83%), Postives = 433/462 (93.72%), Query Frame = 0


Query: 1   MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAATEIPAFPLLQP 60
           MANSISFH  THRFI CPQVKDFRSF SPRF+Y SSTS K RLRPIKAAT +PAFPLLQP
Sbjct: 1   MANSISFHHPTHRFISCPQVKDFRSFPSPRFTYNSSTSPKTRLRPIKAATGLPAFPLLQP 60

Query: 61  PKVDESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120
           PK DESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI
Sbjct: 61  PKADESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120

Query: 121 PLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNFWQ 180
           PLE+MLTIS+K PWMFFPDIIPVGHPIFDIINST+PETDWDLRLACLLLYAFDREDNFWQ
Sbjct: 121 PLEIMLTISQKLPWMFFPDIIPVGHPIFDIINSTDPETDWDLRLACLLLYAFDREDNFWQ 180

Query: 181 LYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKIKR 240
           LYGDFLPS DECTSLLLASEEE+ ELQDQNLAS IRDQQRRALEFWERNWHSGVPLKIKR
Sbjct: 181 LYGDFLPSIDECTSLLLASEEELSELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIKR 240

Query: 241 LAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKDR 300
           LA+DPKRFIWAVSIAQSRCINM+TRIGALVQ+ANMLIPYADM+NHSF PNCFFHWRFKDR
Sbjct: 241 LARDPKRFIWAVSIAQSRCINMETRIGALVQNANMLIPYADMMNHSFEPNCFFHWRFKDR 300

Query: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLDSF 360
           MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFS NA IHLDSF
Sbjct: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSGNACIHLDSF 360

Query: 361 LSVFNIAGLPENYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 420
           LSVFNIAGLPENYYYNGRLS +EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL
Sbjct: 361 LSVFNIAGLPENYYYNGRLSKKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVKEL 420

Query: 421 QEECRQMLAAFPTTTEKDQKMLGTPCSPCLLPKLTASLAYRI 463
           QEEC++MLAAFPTT+EKDQK+L +         L AS+ YR+
Sbjct: 421 QEECQRMLAAFPTTSEKDQKLLDSMSQ--ATRTLEASIKYRL 460

[Close]

BLAST of Clc03G04380 vs. ExPASy TrEMBL
Match: A0A1S3B0Q7 (protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484777 PE=4 SV=1)

HSP 1 Score: 845.1 bits (2182), Expect = 1.7e-241
Identity = 415/465 (89.25%), Postives = 433/465 (93.12%), Query Frame = 0


Query: 1   MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAATEIPAFPLLQP 60
           MANSISFH  THRFI CPQVKDFRSF SPRF+Y SSTS K RLRPIKAAT +PAFPLLQP
Sbjct: 1   MANSISFHHPTHRFISCPQVKDFRSFPSPRFTYNSSTSPKTRLRPIKAATGLPAFPLLQP 60

Query: 61  PKVDESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120
           PK DESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI
Sbjct: 61  PKADESPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIMEI 120

Query: 121 PLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNFWQ 180
           PLE+MLTIS+K PWMFFPDIIPVGHPIFDIINST+PETDWDLRLACLLLYAFDREDNFWQ
Sbjct: 121 PLEIMLTISQKLPWMFFPDIIPVGHPIFDIINSTDPETDWDLRLACLLLYAFDREDNFWQ 180

Query: 181 LYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKIKR 240
           LYGDFLPS DECTSLLLASEEE+ ELQDQNLAS IRDQQRRALEFWERNWHSGVPLKIKR
Sbjct: 181 LYGDFLPSIDECTSLLLASEEELSELQDQNLASTIRDQQRRALEFWERNWHSGVPLKIKR 240

Query: 241 LAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFKDR 300
           LA+DPKRFIWAVSIAQSRCINM+TRIGALVQ+ANMLIPYADM+NHSF PNCFFHWRFKDR
Sbjct: 241 LARDPKRFIWAVSIAQSRCINMETRIGALVQNANMLIPYADMMNHSFEPNCFFHWRFKDR 300

Query: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLDSF 360
           MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFS NA IHLDSF
Sbjct: 301 MLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSGNACIHLDSF 360

Query: 361 LSVFNIAGLPENYYYN---GRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAV 420
           LSVFNIAGLPENYYYN   GRLS +EDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAV
Sbjct: 361 LSVFNIAGLPENYYYNAIAGRLSKKEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAV 420

Query: 421 KELQEECRQMLAAFPTTTEKDQKMLGTPCSPCLLPKLTASLAYRI 463
           KELQEEC++MLAAFPTT+EKDQK+L +         L AS+ YR+
Sbjct: 421 KELQEECQRMLAAFPTTSEKDQKLLDSMSQ--ATRTLEASIKYRL 463

[Close]

BLAST of Clc03G04380 vs. TAIR 10
Match: AT4G20130.1 (plastid transcriptionally active 14 )

HSP 1 Score: 653.3 bits (1684), Expect = 1.9e-187
Identity = 316/444 (71.17%), Postives = 374/444 (84.23%), Query Frame = 0


Query: 1   MANSISFHQTTHRFIPCPQVKDFRSFSSPRFSYCSSTSSKGRLRPIKAAT-EIPAFPLLQ 60
           MA+S+S    T+ FI  PQ       S+PR         +  +RPIK A+ E   FPL Q
Sbjct: 1   MASSVSLQFLTNTFISKPQGFCNGIVSAPRPRSNLLRDRQNGVRPIKVASIETQPFPLFQ 60

Query: 61  PPKVDE-SPSELEPADPDFYKIGYVRSMRAYGIEFKEGPDGFGVYASKDVEPLRRARVIM 120
            P  +E S SELE ADPDFYKIGYVRS+RAYG+EFKEGPDGFGVYASKD+EP RRARVIM
Sbjct: 61  SPASEESSSSELETADPDFYKIGYVRSVRAYGVEFKEGPDGFGVYASKDIEPRRRARVIM 120

Query: 121 EIPLELMLTISKKQPWMFFPDIIPVGHPIFDIINSTNPETDWDLRLACLLLYAFDREDNF 180
           EIPLELM+TI +K PWMFFPDI+P+GHPIFDIINST+PE DWD+RLACLLL++FDR+D+F
Sbjct: 121 EIPLELMITIRQKHPWMFFPDIVPIGHPIFDIINSTDPEIDWDIRLACLLLFSFDRDDHF 180

Query: 181 WQLYGDFLPSFDECTSLLLASEEEILELQDQNLASIIRDQQRRALEFWERNWHSGVPLKI 240
           W+LYGDFLP+ DEC+SLLLA+EE++ ELQD +L S IR QQ+R L+FWE+NWHSGVPLKI
Sbjct: 181 WRLYGDFLPAADECSSLLLATEEDLAELQDPDLVSTIRQQQKRILDFWEKNWHSGVPLKI 240

Query: 241 KRLAQDPKRFIWAVSIAQSRCINMQTRIGALVQDANMLIPYADMLNHSFRPNCFFHWRFK 300
           KRLA+DP+RFIWAVS+AQ+RCI+MQTR+GALVQ+ NM+IPYADMLNHSF PNCF HWR K
Sbjct: 241 KRLAEDPERFIWAVSMAQTRCISMQTRVGALVQELNMMIPYADMLNHSFEPNCFLHWRPK 300

Query: 301 DRMLEVMINAGQQIKKGQEMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARIHLD 360
           DRMLEVM NAGQ IKKG+EMT+NYM GQ+NNM ++RYGFS+PVNPWD IKFS ++RIHL+
Sbjct: 301 DRMLEVMSNAGQDIKKGEEMTINYMPGQKNNMLMERYGFSTPVNPWDAIKFSGDSRIHLN 360

Query: 361 SFLSVFNIAGLPENYYYNGRLSNEEDTFVDGAVIAAARSLPSWSDGDIPPSPSRERKAVK 420
           SFLSVFNI GLPE YY++  LS   DTFVDGAVIAAAR+LP+WSD D+PP PS ERKAVK
Sbjct: 361 SFLSVFNIYGLPEEYYHDSELS-RGDTFVDGAVIAAARTLPTWSDIDLPPIPSAERKAVK 420

Query: 421 ELQEECRQMLAAFPTTTEKDQKML 443
           ELQ+ECR+MLA +PTT E+DQK+L
Sbjct: 421 ELQDECRKMLAEYPTTAEQDQKLL 443

[Close]

BLAST of Clc03G04380 vs. TAIR 10
Match: AT5G44710.1 (CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219); Has 101 Blast hits to 101 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). )

HSP 1 Score: 154.5 bits (389), Expect = 2.7e-37
Identity = 75/96 (78.12%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 492 RSFSVTAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVAQWYPYDIKKDDPLV 551
           +S   +AV +GVTEARARIFGH+LNPTGQRS HK+LRKKLIGDKVA+WYPYDIK +DP V
Sbjct: 7   KSLISSAVGRGVTEARARIFGHMLNPTGQRSPHKILRKKLIGDKVAEWYPYDIKNEDPNV 66

Query: 552 MARQEQERLSKLEMLKRRGKGPPKKGQGRRAAKRNK 588
           +AR+E+ER+SKLEMLKRR KGPPKKG G+RAAKRNK
Sbjct: 67  LAREEKERISKLEMLKRRDKGPPKKGHGKRAAKRNK 102

[Close]

BLAST of Clc03G04380 vs. TAIR 10
Match: AT1G24610.1 (Rubisco methyltransferase family protein )

HSP 1 Score: 60.1 bits (144), Expect = 7.0e-09
Identity = 57/219 (26.03%), Postives = 88/219 (40.18%), Query Frame = 0


Query: 156 PETDWDLRLACLLLYAFDREDNFWQLYGDFLPSFDECTSLLLASEEEILELQDQNLASII 215
           PE  W ++L   LL      D+FW  Y   LP  +  T  +    E+I  LQ   L   +
Sbjct: 107 PEELWAMKLGLRLLQERANADSFWWPYISNLP--ETYTVPIFFPGEDIKNLQYAPLLHQV 166

Query: 216 RDQQRRALEFWERNWHSGVPLKIKRLAQDPK--------------RFIWAVSIAQSRCIN 275
             + R  LEF +         +I+R  +D K                 W +S   +R   
Sbjct: 167 NKRCRFLLEFEQ---------EIRRTLEDVKASDHPFSGQDVNASALGWTMSAVSTRAFR 226

Query: 276 M---QTRIGALVQDANMLIPYADMLNHSFRPNC--FFHWRFKDRMLEVMINAGQQIKKGQ 335
           +   +   G    D  M++P  DM NHSF+PN          D    V + A  ++K+  
Sbjct: 227 LHGNKKLQGGSSDDVPMMLPLIDMCNHSFKPNARIIQEQNGADSNTLVKVVAETEVKEND 286

Query: 336 EMTVNYMNGQQNNMFLQRYGFSSPVNPWDMIKFSSNARI 356
            + +NY     N+ FL  YGF    NP+D I+   + ++
Sbjct: 287 PLLLNY-GCLSNDFFLLDYGFVIESNPYDTIELKYDEQL 313

The following BLAST results are available for this feature:

BLAST of Clc03G04380 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055365.1	2.3e-248	92.92	protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis melo var. makuwa...	[more]
XP_004154058.1	5.0e-243	90.04	protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis sativus] >KGN644...	[more]
XP_008440293.1	8.6e-243	89.83	PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis melo]	[more]
TYJ99292.1	8.6e-243	86.04	protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis melo var. makuwa...	[more]
XP_038876974.1	5.5e-242	89.39	protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Benincasa hispida]	[more]

BLAST of Clc03G04380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JF5	2.6e-186	71.17	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 OS=Arabidopsis thaliana OX=3702 GN=P...	[more]
P53305	5.1e-04	41.11	Mitochondrial 37S ribosomal protein S27 OS=Saccharomyces cerevisiae (strain ATCC...	[more]

BLAST of Clc03G04380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UP05	1.1e-248	92.92	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 OS=Cucumis melo var. maku...	[more]
A0A0A0LTZ8	2.4e-243	90.04	SET domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G051910 PE=4 SV...	[more]
A0A5D3BHR6	4.1e-243	86.04	Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 OS=Cucumis melo var. maku...	[more]
A0A1S3B1I5	4.1e-243	89.83	protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 OS=Cucumis melo OX=3656 G...	[more]
A0A1S3B0Q7	1.7e-241	89.25	protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 OS=Cucumis melo OX=3656 G...	[more]

BLAST of Clc03G04380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20130.1	1.9e-187	71.17	plastid transcriptionally active 14	[more]
AT5G44710.1	2.7e-37	78.13	CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33, mitochondrial (InterPro:I...	[more]
AT1G24610.1	7.0e-09	26.03	Rubisco methyltransferase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.1410.10	set domain protein methyltransferase, domain 1	coord: 83..337 e-value: 4.3E-39 score: 136.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 563..587
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 572..587
None	No IPR available	PANTHER	PTHR13271	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	coord: 51..439
None	No IPR available	PANTHER	PTHR13271:SF54	PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 14	coord: 51..439
None	No IPR available	CDD	cd10527	SET_LSMT	coord: 90..337 e-value: 3.68867E-46 score: 160.693
None	No IPR available	SUPERFAMILY	82199	SET domain	coord: 98..338
IPR013219	Ribosomal protein S27/S33, mitochondrial	PFAM	PF08293	MRP-S33	coord: 503..576 e-value: 2.8E-13 score: 49.8
IPR001214	SET domain	PFAM	PF00856	SET	coord: 99..322 e-value: 8.6E-20 score: 71.8
IPR001214	SET domain	PROSITE	PS50280	SET	coord: 78..323 score: 8.893302
IPR036464	Rubisco LSMT, substrate-binding domain superfamily	GENE3D	3.90.1420.10		coord: 379..463 e-value: 1.8E-6 score: 29.7
IPR036464	Rubisco LSMT, substrate-binding domain superfamily	SUPERFAMILY	81822	RuBisCo LSMT C-terminal, substrate-binding domain	coord: 334..448

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G04380.2	Clc03G04380.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0018026	peptidyl-lysine monomethylation
biological_process	GO:0042793	plastid transcription
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0010027	thylakoid membrane organization
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0000427	plastid-encoded plastid RNA polymerase complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016279	protein-lysine N-methyltransferase activity