Clc03G04000 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc03G04000
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	F-box protein At1g67340
Location	ClcChr03: 3945102 .. 3946405 (-)
RNA-Seq Expression	Clc03G04000
Synteny	Clc03G04000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCTTTTTCAAGGTGAAGGCCACAACAAAGAACACTCTATTACATTCCGGAATGGTGTGCAATAAAAGGCGAAGAACTTCCACCAGCACCGGCGCCGGGATTTCTGATCTCTTCGACGCTTTGCCGGACGATCTAGTCGTCGTCGTCCTTAGCAAGCTTAGCGCCATCGCTTCTTCTCCTTCCGACCTCGTTAATGTCATGATAACGTAAGAATTTCCGTGTGATTCTCCTAATTTCTCGAGTTTTTTGTAATTTTCTGCTTGATGTTTATGTGATTTTTTTTTCTTTTTTTTTGCGAATTATAGATGTAAAAGGTTCAATCGATTGGCTCTGCATCCGATTGTGTTATCGAAAGCTGGACCTAAAGCATTTGAAATCCAGACGAAAAACTGGTCTGAATCGACTCATCGATTTCTCAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCCTGCTACACTCTCGGAATGGTCCGTGTAATTGATTGATTTTCCTTTCTGCAATTTCAAATGAGTTGATTTTGAATCTTAATTTTCGTTTTCTGTTTTCGTTTTTTTTTTCAGATCGAGTTTTATTGTTTAAAGAACAGAGGGAGTGGAGCTTCGTTAATGGCGAAAGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTCAACGGTAGCGGTGGCTCAAAGAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGTGGACGAGCCGCTTATCTCGGCCATATTGACGCGCTTCGTGAACTAGGTCACTGCCTTCAAGACGGTTATGGCGTCCCTCAAAACGCATCCGAAGGACGTCGTCTCCTAATCGAAGCCAACGCGCGTGAACTCGCGTCCATAACAAACTCCTCCCTCCGCCGTCTCCACTGCTCCGGCGACCGCCCTTCCGCGACGGATTCCGACGGATCGCTTCTCAGTGACTTCGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCGAACCAGTTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATGTATCGCTGAAGGACTGAGACTTTGCTCAAACAGTGGTTGTGGAAGGCCAGAGACGCGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAACTATTGTTCACGAGGATGCCAAGCTCTGGACTGGAAACTGCGGCATAAGACGGAATGTGCGCCGTTCGATCGGTGGCTAATCGAGGACGATGACCTGGAAGGCGACGACGACGGCGGCGTAAATAGAATAGAGCAGTTTGGAGACGGTGAGAATGTGGAATCTGAATAA

mRNA sequence

ATGGCGGTGAAGGCCACAACAAAGAACACTCTATTACATTCCGGAATGGTGTGCAATAAAAGGCGAAGAACTTCCACCAGCACCGGCGCCGGGATTTCTGATCTCTTCGACGCTTTGCCGGACGATCTAGTCGTCGTCGTCCTTAGCAAGCTTAGCGCCATCGCTTCTTCTCCTTCCGACCTCGTTAATGTCATGATAACATGTAAAAGGTTCAATCGATTGGCTCTGCATCCGATTGTGTTATCGAAAGCTGGACCTAAAGCATTTGAAATCCAGACGAAAAACTGGTCTGAATCGACTCATCGATTTCTCAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCCTGCTACACTCTCGGAATGGTCCGTATCGAGTTTTATTGTTTAAAGAACAGAGGGAGTGGAGCTTCGTTAATGGCGAAAGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTCAACGGTAGCGGTGGCTCAAAGAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGTGGACGAGCCGCTTATCTCGGCCATATTGACGCGCTTCGTGAACTAGGTCACTGCCTTCAAGACGGTTATGGCGTCCCTCAAAACGCATCCGAAGGACGTCGTCTCCTAATCGAAGCCAACGCGCGTGAACTCGCGTCCATAACAAACTCCTCCCTCCGCCGTCTCCACTGCTCCGGCGACCGCCCTTCCGCGACGGATTCCGACGGATCGCTTCTCAGTGACTTCGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCGAACCAGTTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATGTATCGCTGAAGGACTGAGACTTTGCTCAAACAGTGGTTGTGGAAGGCCAGAGACGCGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAACTATTGTTCACGAGGATGCCAAGCTCTGGACTGGAAACTGCGGCATAAGACGGAATGTGCGCCGTTCGATCGGTGGCTAATCGAGGACGATGACCTGGAAGGCGACGACGACGGCGGCGTAAATAGAATAGAGCAGTTTGGAGACGGTGAGAATGTGGAATCTGAATAA

Coding sequence (CDS)

ATGGCGGTGAAGGCCACAACAAAGAACACTCTATTACATTCCGGAATGGTGTGCAATAAAAGGCGAAGAACTTCCACCAGCACCGGCGCCGGGATTTCTGATCTCTTCGACGCTTTGCCGGACGATCTAGTCGTCGTCGTCCTTAGCAAGCTTAGCGCCATCGCTTCTTCTCCTTCCGACCTCGTTAATGTCATGATAACATGTAAAAGGTTCAATCGATTGGCTCTGCATCCGATTGTGTTATCGAAAGCTGGACCTAAAGCATTTGAAATCCAGACGAAAAACTGGTCTGAATCGACTCATCGATTTCTCAAATTGTGCGTTTCTGCTGGTAACGTGGAAGCCTGCTACACTCTCGGAATGGTCCGTATCGAGTTTTATTGTTTAAAGAACAGAGGGAGTGGAGCTTCGTTAATGGCGAAAGCCGCGATTAAATCTCATCCGTTGGCGCTTTACTCGCTCGCCATCGTACAATTCAACGGTAGCGGTGGCTCAAAGAGCGACAAGAATCTCCGTGCCGGAGTTGCTCTGTGTGGACGAGCCGCTTATCTCGGCCATATTGACGCGCTTCGTGAACTAGGTCACTGCCTTCAAGACGGTTATGGCGTCCCTCAAAACGCATCCGAAGGACGTCGTCTCCTAATCGAAGCCAACGCGCGTGAACTCGCGTCCATAACAAACTCCTCCCTCCGCCGTCTCCACTGCTCCGGCGACCGCCCTTCCGCGACGGATTCCGACGGATCGCTTCTCAGTGACTTCGGCTGTAACTTTCCAGCGCCAGAGGCTCATCCGGCGAACCAGTTTTTAAGAGATTGGTTCGCATCGGGGCGTGGATGTATCGCTGAAGGACTGAGACTTTGCTCAAACAGTGGTTGTGGAAGGCCAGAGACGCGGCTACATGAATTCCGGCGATGCTCTGTTTGTGGTAATGTAAACTATTGTTCACGAGGATGCCAAGCTCTGGACTGGAAACTGCGGCATAAGACGGAATGTGCGCCGTTCGATCGGTGGCTAATCGAGGACGATGACCTGGAAGGCGACGACGACGGCGGCGTAAATAGAATAGAGCAGTTTGGAGACGGTGAGAATGTGGAATCTGAATAA

Protein sequence

MAVKATTKNTLLHSGMVCNKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLALHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSGASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGCNFPAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGVNRIEQFGDGENVESE

Homology

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BLAST of Clc03G04000 vs. NCBI nr
Match: XP_008439699.1 (PREDICTED: F-box protein At1g67340 [Cucumis melo] >KAA0055331.1 F-box protein [Cucumis melo var. makuwa] >TYJ99256.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 678.7 bits (1750), Expect = 2.8e-191
Identity = 335/352 (95.17%), Postives = 340/352 (96.59%), Query Frame = 0


Query: 16  MVCNKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLA 75
           M+CNKRRRTSTS GAGISDLFD LPDDLVVVVL KLSA ASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 76  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSG 135
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGM  IEFYCLKNRG+G
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGM--IEFYCLKNRGTG 120

Query: 136 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 195
           ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH
Sbjct: 121 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 180

Query: 196 CLQDGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGC 255
           CLQDGYGVPQNASEGRRLLIEANARELA ITNSSLRRLHCS  R SATDS GSLLSDFGC
Sbjct: 181 CLQDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGC 240

Query: 256 NFPAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 315
           NFPAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS
Sbjct: 241 NFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 316 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGVNRIEQFGDGENVESE 368
           RGCQALDWKLRHKTECAPFDRWLIED++LEGD+DGGVNRIEQFGDGENVESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDEELEGDEDGGVNRIEQFGDGENVESE 350

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BLAST of Clc03G04000 vs. NCBI nr
Match: XP_038894785.1 (F-box protein At1g67340 [Benincasa hispida])

HSP 1 Score: 671.4 bits (1731), Expect = 4.4e-189
Identity = 332/352 (94.32%), Postives = 336/352 (95.45%), Query Frame = 0


Query: 16  MVCNKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLA 75
           M+CNKRRRTSTS  AGISDLFD LPDDLVVVVL KLSA ASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAAAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 76  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSG 135
           LHPIVLSKAGPK FEI TKNWSESTHRFLKLCVSAGNVEACYTLGM  IEFYCLKNRGSG
Sbjct: 61  LHPIVLSKAGPKLFEILTKNWSESTHRFLKLCVSAGNVEACYTLGM--IEFYCLKNRGSG 120

Query: 136 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 195
           ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH
Sbjct: 121 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 180

Query: 196 CLQDGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGC 255
           CLQDGYGVPQNASEGRRLLIEANAREL SITNSSLRRLHCSGD PSA DS GSLLSDFGC
Sbjct: 181 CLQDGYGVPQNASEGRRLLIEANARELTSITNSSLRRLHCSGDLPSAMDSGGSLLSDFGC 240

Query: 256 NFPAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 315
           NFPA EAHPAN+FLRDWFASGRG +AEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS
Sbjct: 241 NFPAAEAHPANRFLRDWFASGRGFVAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 316 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGVNRIEQFGDGENVESE 368
           RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDD+G VNRIEQFGDGENVESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDNGDVNRIEQFGDGENVESE 350

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BLAST of Clc03G04000 vs. NCBI nr
Match: KAG7019742.1 (F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 669.1 bits (1725), Expect = 2.2e-188
Identity = 330/352 (93.75%), Postives = 332/352 (94.32%), Query Frame = 0


Query: 16  MVCNKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLA 75
           MVCNKRRRTSTST AGISDLFD LPDDLVVVVL KLSA ASSPSD+VNVMITCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRFNRLA 60

Query: 76  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSG 135
           LHP VL KAGPK FEIQT NWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSG
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSG 120

Query: 136 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 195
           ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH
Sbjct: 121 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 180

Query: 196 CLQDGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGC 255
           CLQDGYGV QNASEGRRLLIEANARELASITNSSL RLHC GDRP ATDS  SLLSDFGC
Sbjct: 181 CLQDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDRPPATDSSESLLSDFGC 240

Query: 256 NFPAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 315
            FPAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS
Sbjct: 241 KFPAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 316 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGVNRIEQFGDGENVESE 368
           RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDG VNRIEQ  DGE+VESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGDVNRIEQLEDGEDVESE 352

[Close]

BLAST of Clc03G04000 vs. NCBI nr
Match: XP_004154118.1 (F-box protein At1g67340 [Cucumis sativus] >KGN64409.1 hypothetical protein Csa_013400 [Cucumis sativus])

HSP 1 Score: 664.5 bits (1713), Expect = 5.4e-187
Identity = 331/353 (93.77%), Postives = 335/353 (94.90%), Query Frame = 0


Query: 16  MVCNKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLA 75
           M+CNKRRRTSTS   GISDLFD LPDDLVVVVL KLSA ASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 76  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSG 135
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGM  IEFYCLKNRG+G
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGM--IEFYCLKNRGTG 120

Query: 136 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 195
           ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH
Sbjct: 121 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 180

Query: 196 CLQDGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGC 255
           CLQDGYGVPQN SEGRRLLIEANARELA ITNSSLRRLHCS  R SATDS GSLLSDFGC
Sbjct: 181 CLQDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGC 240

Query: 256 NFPAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 315
           NFPAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS
Sbjct: 241 NFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 316 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGG-VNRIEQFGDGENVESE 368
           RGCQALDWKLRHKTECAPFDRWLIE+D+LEGDDDGG VNRIEQF DGENVESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

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BLAST of Clc03G04000 vs. NCBI nr
Match: XP_023001353.1 (F-box protein At1g67340-like [Cucurbita maxima])

HSP 1 Score: 662.5 bits (1708), Expect = 2.1e-186
Identity = 328/352 (93.18%), Postives = 332/352 (94.32%), Query Frame = 0


Query: 16  MVCNKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLA 75
           MVCNKRRRTSTSTGAGISDLFD+LPDDLVVVVL KLSA ASSPSD+VNVMITCKR NRLA
Sbjct: 1   MVCNKRRRTSTSTGAGISDLFDSLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRLNRLA 60

Query: 76  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSG 135
           LHP VL KAGPK FEIQT NWSES+HRFLKLCVSAGNVEACYTLGM  IEFYCLKNRGSG
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESSHRFLKLCVSAGNVEACYTLGM--IEFYCLKNRGSG 120

Query: 136 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 195
           ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH
Sbjct: 121 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 180

Query: 196 CLQDGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGC 255
           CLQDGYGV QNASEGRRLLIEANARELASITNSSL RLHC GDRP ATDS  SLLSDFGC
Sbjct: 181 CLQDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDRPPATDSSESLLSDFGC 240

Query: 256 NFPAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 315
            FPAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS
Sbjct: 241 KFPAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 316 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGVNRIEQFGDGENVESE 368
           RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDG VNRIEQ GDGE+VESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGDVNRIEQLGDGEDVESE 350

[Close]

BLAST of Clc03G04000 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.5e-123
Identity = 221/347 (63.69%), Postives = 267/347 (76.95%), Query Frame = 0


Query: 27  STGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLALHPIVLSKAGP 86
           +TGA   DL D++PDDLV+ +L KL + +  P+D +NV++TCKR   LA++PIVLS+  P
Sbjct: 38  TTGA---DLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSP 97

Query: 87  KAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSGASLMAKAAIKS 146
           KA  ++  NWSE +HRFLK CV AG++EACYTLGM+R  FYCL+NRG+GASLMAKAAI S
Sbjct: 98  KAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIR--FYCLQNRGNGASLMAKAAISS 157

Query: 147 HPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQN 206
           H  ALYSLA++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYGVPQN
Sbjct: 158 HAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQN 217

Query: 207 ASEGRRLLIEANARELASITNSSLRR----LHCSGDRPSATDSDGS----LLSDFGCNFP 266
            SEGRR L++ANARELA++ +S ++     L  S   P    + G     LLSDFGCN P
Sbjct: 218 VSEGRRFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVP 277

Query: 267 APEAHPANQFLRDWFA-SGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 326
           APE HPAN+FL DWFA  G  C  +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR 
Sbjct: 278 APETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRA 337

Query: 327 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGVNRIEQFGDGENV 365
           CQALDWKLRHK +CAP  RWL E D  EG+      +I+  G+G+NV
Sbjct: 338 CQALDWKLRHKMDCAPVQRWLEEGDGGEGN-----VQIDGNGNGDNV 374

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BLAST of Clc03G04000 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 1.1e-113
Identity = 203/334 (60.78%), Postives = 252/334 (75.45%), Query Frame = 0


Query: 19  NKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLALHP 78
           NK++R   +    +++ F+ L DDL++ +L KL+  ASSPSD + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 79  IVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSGASL 138
           +VLSKAG +   +  + WS+S+H+FLKLCV+AGN++A Y+LGM+R  FYCL+N  SGASL
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIR--FYCLQNPVSGASL 124

Query: 139 MAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQ 198
           MAKAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQ
Sbjct: 125 MAKAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQ 184

Query: 199 DGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGCNFP 258
           DGYGVP++ SEGRRLLI+ANARELA    S L     SGD       +   L+D     P
Sbjct: 185 DGYGVPRDVSEGRRLLIQANARELACSLRSYLSLK--SGD-------ENETLTDLSV-VP 244

Query: 259 APEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGC 318
             E HP N+FL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGC
Sbjct: 245 VQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGC 304

Query: 319 QALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGV 353
           QALDW+ +HK EC P D W+    ++ GDD   V
Sbjct: 305 QALDWRAKHKVECTPLDLWVAAAAEI-GDDGEAV 325

[Close]

BLAST of Clc03G04000 vs. ExPASy Swiss-Prot
Match: Q2YDC9 (Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 4.9e-05
Identity = 23/56 (41.07%), Postives = 29/56 (51.79%), Query Frame = 0


Query: 280 IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 336
           +  G  LC   GC  P       +RCS C   +YCS+  Q+LDW+L HK  CA  D
Sbjct: 128 LKSGAHLCRVCGCSGP-------KRCSRCHKAHYCSKEHQSLDWRLGHKQACAQTD 176

[Close]

BLAST of Clc03G04000 vs. ExPASy Swiss-Prot
Match: Q09415 (SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=4 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 3.2e-04
Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 290 SGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTEC 332
           S C +  T + E ++CS C  + YCS+ CQ  DWKL HK EC
Sbjct: 24  SYCNQCLTSMAELKKCSACRRLAYCSQECQRADWKL-HKVEC 64

[Close]

BLAST of Clc03G04000 vs. ExPASy Swiss-Prot
Match: P46718 (Programmed cell death protein 2 OS=Mus musculus OX=10090 GN=Pdcd2 PE=2 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 4.1e-04
Identity = 25/67 (37.31%), Postives = 30/67 (44.78%), Query Frame = 0


Query: 274 ASGRGCIA----EGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKT 333
           A G  C+      G  LC   GC  P T       CS C   +YCS+  Q LDW+L HK 
Sbjct: 117 ALGTECVCLQLKSGAHLCRVCGCLAPMT-------CSRCKQAHYCSKEHQTLDWRLGHKQ 176

Query: 334 ECAPFDR 337
            C   D+
Sbjct: 177 ACTQSDK 176

[Close]

BLAST of Clc03G04000 vs. ExPASy TrEMBL
Match: A0A5A7UP50 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004680 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.3e-191
Identity = 335/352 (95.17%), Postives = 340/352 (96.59%), Query Frame = 0


Query: 16  MVCNKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLA 75
           M+CNKRRRTSTS GAGISDLFD LPDDLVVVVL KLSA ASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 76  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSG 135
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGM  IEFYCLKNRG+G
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGM--IEFYCLKNRGTG 120

Query: 136 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 195
           ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH
Sbjct: 121 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 180

Query: 196 CLQDGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGC 255
           CLQDGYGVPQNASEGRRLLIEANARELA ITNSSLRRLHCS  R SATDS GSLLSDFGC
Sbjct: 181 CLQDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGC 240

Query: 256 NFPAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 315
           NFPAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS
Sbjct: 241 NFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 316 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGVNRIEQFGDGENVESE 368
           RGCQALDWKLRHKTECAPFDRWLIED++LEGD+DGGVNRIEQFGDGENVESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDEELEGDEDGGVNRIEQFGDGENVESE 350

[Close]

BLAST of Clc03G04000 vs. ExPASy TrEMBL
Match: A0A1S3AZD5 (F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1)

HSP 1 Score: 678.7 bits (1750), Expect = 1.3e-191
Identity = 335/352 (95.17%), Postives = 340/352 (96.59%), Query Frame = 0


Query: 16  MVCNKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLA 75
           M+CNKRRRTSTS GAGISDLFD LPDDLVVVVL KLSA ASSPSDLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAGAGISDLFDGLPDDLVVVVLGKLSATASSPSDLVNVMITCKRFNRLA 60

Query: 76  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSG 135
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGM  IEFYCLKNRG+G
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGM--IEFYCLKNRGTG 120

Query: 136 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 195
           ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH
Sbjct: 121 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 180

Query: 196 CLQDGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGC 255
           CLQDGYGVPQNASEGRRLLIEANARELA ITNSSLRRLHCS  R SATDS GSLLSDFGC
Sbjct: 181 CLQDGYGVPQNASEGRRLLIEANARELAYITNSSLRRLHCSSHRQSATDSGGSLLSDFGC 240

Query: 256 NFPAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 315
           NFPAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS
Sbjct: 241 NFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 316 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGVNRIEQFGDGENVESE 368
           RGCQALDWKLRHKTECAPFDRWLIED++LEGD+DGGVNRIEQFGDGENVESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDEELEGDEDGGVNRIEQFGDGENVESE 350

[Close]

BLAST of Clc03G04000 vs. ExPASy TrEMBL
Match: A0A0A0LTV0 (MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 PE=4 SV=1)

HSP 1 Score: 664.5 bits (1713), Expect = 2.6e-187
Identity = 331/353 (93.77%), Postives = 335/353 (94.90%), Query Frame = 0


Query: 16  MVCNKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLA 75
           M+CNKRRRTSTS   GISDLFD LPDDLVVVVL KLSA ASSP DLVNVMITCKRFNRLA
Sbjct: 1   MLCNKRRRTSTSAATGISDLFDGLPDDLVVVVLGKLSATASSPLDLVNVMITCKRFNRLA 60

Query: 76  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSG 135
           LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGM  IEFYCLKNRG+G
Sbjct: 61  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGM--IEFYCLKNRGTG 120

Query: 136 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 195
           ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH
Sbjct: 121 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 180

Query: 196 CLQDGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGC 255
           CLQDGYGVPQN SEGRRLLIEANARELA ITNSSLRRLHCS  R SATDS GSLLSDFGC
Sbjct: 181 CLQDGYGVPQNVSEGRRLLIEANARELAYITNSSLRRLHCSRHRQSATDSGGSLLSDFGC 240

Query: 256 NFPAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 315
           NFPAPEAHPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS
Sbjct: 241 NFPAPEAHPANQFLRDWFASGRGSIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 316 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGG-VNRIEQFGDGENVESE 368
           RGCQALDWKLRHKTECAPFDRWLIE+D+LEGDDDGG VNRIEQF DGENVESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEEDELEGDDDGGVVNRIEQFDDGENVESE 351

[Close]

BLAST of Clc03G04000 vs. ExPASy TrEMBL
Match: A0A6J1KQ99 (F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111495512 PE=4 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 1.0e-186
Identity = 328/352 (93.18%), Postives = 332/352 (94.32%), Query Frame = 0


Query: 16  MVCNKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLA 75
           MVCNKRRRTSTSTGAGISDLFD+LPDDLVVVVL KLSA ASSPSD+VNVMITCKR NRLA
Sbjct: 1   MVCNKRRRTSTSTGAGISDLFDSLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRLNRLA 60

Query: 76  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSG 135
           LHP VL KAGPK FEIQT NWSES+HRFLKLCVSAGNVEACYTLGM  IEFYCLKNRGSG
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESSHRFLKLCVSAGNVEACYTLGM--IEFYCLKNRGSG 120

Query: 136 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 195
           ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH
Sbjct: 121 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 180

Query: 196 CLQDGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGC 255
           CLQDGYGV QNASEGRRLLIEANARELASITNSSL RLHC GDRP ATDS  SLLSDFGC
Sbjct: 181 CLQDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDRPPATDSSESLLSDFGC 240

Query: 256 NFPAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 315
            FPAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS
Sbjct: 241 KFPAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 316 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGVNRIEQFGDGENVESE 368
           RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDG VNRIEQ GDGE+VESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGDVNRIEQLGDGEDVESE 350

[Close]

BLAST of Clc03G04000 vs. ExPASy TrEMBL
Match: A0A6J1EA77 (F-box protein At5g50450-like OS=Cucurbita moschata OX=3662 GN=LOC111431294 PE=4 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 1.4e-185
Identity = 327/352 (92.90%), Postives = 330/352 (93.75%), Query Frame = 0


Query: 16  MVCNKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLA 75
           MVCNKRRRTSTST AGISDLFD LPDDLVVVVL KLSA ASSPSD+VNVMITCKRFNRLA
Sbjct: 1   MVCNKRRRTSTSTDAGISDLFDGLPDDLVVVVLGKLSAAASSPSDIVNVMITCKRFNRLA 60

Query: 76  LHPIVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSG 135
           LHP VL KAGPK FEIQT NWSESTHRFLKLCVSAGNVEACYTLGM  IEFYCLKNRGSG
Sbjct: 61  LHPFVLKKAGPKVFEIQTINWSESTHRFLKLCVSAGNVEACYTLGM--IEFYCLKNRGSG 120

Query: 136 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 195
           ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH
Sbjct: 121 ASLMAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGH 180

Query: 196 CLQDGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGC 255
           CLQDGYGV QNASEGRRLLIEANARELASITNSSL RLHC GD+P ATDS  SLLSDFGC
Sbjct: 181 CLQDGYGVAQNASEGRRLLIEANARELASITNSSLLRLHCCGDQPPATDSSESLLSDFGC 240

Query: 256 NFPAPEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 315
            FPAPE HPANQFLRDWFASGRG IAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS
Sbjct: 241 KFPAPETHPANQFLRDWFASGRGFIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCS 300

Query: 316 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGVNRIEQFGDGENVESE 368
           RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDG VNRIEQ  DGE+VESE
Sbjct: 301 RGCQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGDVNRIEQLEDGEDVESE 350

[Close]

BLAST of Clc03G04000 vs. TAIR 10
Match: AT1G67340.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 444.1 bits (1141), Expect = 1.1e-124
Identity = 221/347 (63.69%), Postives = 267/347 (76.95%), Query Frame = 0


Query: 27  STGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLALHPIVLSKAGP 86
           +TGA   DL D++PDDLV+ +L KL + +  P+D +NV++TCKR   LA++PIVLS+  P
Sbjct: 38  TTGA---DLLDSIPDDLVISILCKLGSTSRCPADFINVLLTCKRLKGLAMNPIVLSRLSP 97

Query: 87  KAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSGASLMAKAAIKS 146
           KA  ++  NWSE +HRFLK CV AG++EACYTLGM+R  FYCL+NRG+GASLMAKAAI S
Sbjct: 98  KAIAVKAHNWSEYSHRFLKRCVDAGSLEACYTLGMIR--FYCLQNRGNGASLMAKAAISS 157

Query: 147 HPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQDGYGVPQN 206
           H  ALYSLA++QFNGSGGSK+DK+LRAGVALC RAA+LGH+DALRELGHCLQDGYGVPQN
Sbjct: 158 HAPALYSLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHVDALRELGHCLQDGYGVPQN 217

Query: 207 ASEGRRLLIEANARELASITNSSLRR----LHCSGDRPSATDSDGS----LLSDFGCNFP 266
            SEGRR L++ANARELA++ +S ++     L  S   P    + G     LLSDFGCN P
Sbjct: 218 VSEGRRFLVQANARELAAVLSSGIQARSTWLSLSQPPPPVVPNHGQQTCPLLSDFGCNVP 277

Query: 267 APEAHPANQFLRDWFA-SGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRG 326
           APE HPAN+FL DWFA  G  C  +GLRLCS++GCGRPETR HEFRRCSVCG VNYCSR 
Sbjct: 278 APETHPANRFLADWFAVRGGDCPGDGLRLCSHAGCGRPETRKHEFRRCSVCGVVNYCSRA 337

Query: 327 CQALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGVNRIEQFGDGENV 365
           CQALDWKLRHK +CAP  RWL E D  EG+      +I+  G+G+NV
Sbjct: 338 CQALDWKLRHKMDCAPVQRWLEEGDGGEGN-----VQIDGNGNGDNV 374

[Close]

BLAST of Clc03G04000 vs. TAIR 10
Match: AT5G50450.1 (HCP-like superfamily protein with MYND-type zinc finger )

HSP 1 Score: 411.4 bits (1056), Expect = 7.7e-115
Identity = 203/334 (60.78%), Postives = 252/334 (75.45%), Query Frame = 0


Query: 19  NKRRRTSTSTGAGISDLFDALPDDLVVVVLSKLSAIASSPSDLVNVMITCKRFNRLALHP 78
           NK++R   +    +++ F+ L DDL++ +L KL+  ASSPSD + V+ TCKR NRL LHP
Sbjct: 5   NKKQRLENNHNNTVNNHFEDLHDDLIISILRKLATSASSPSDFLTVLSTCKRLNRLGLHP 64

Query: 79  IVLSKAGPKAFEIQTKNWSESTHRFLKLCVSAGNVEACYTLGMVRIEFYCLKNRGSGASL 138
           +VLSKAG +   +  + WS+S+H+FLKLCV+AGN++A Y+LGM+R  FYCL+N  SGASL
Sbjct: 65  LVLSKAGTQTLAVTAEKWSDSSHKFLKLCVNAGNIDASYSLGMIR--FYCLQNPVSGASL 124

Query: 139 MAKAAIKSHPLALYSLAIVQFNGSGGSKSDKNLRAGVALCGRAAYLGHIDALRELGHCLQ 198
           MAKAAIKSH  ALYSL+++QFNGSGGSK+DKNLRAGVALC R+AYLGH+DALRELGHCLQ
Sbjct: 125 MAKAAIKSHAPALYSLSVIQFNGSGGSKTDKNLRAGVALCARSAYLGHVDALRELGHCLQ 184

Query: 199 DGYGVPQNASEGRRLLIEANARELASITNSSLRRLHCSGDRPSATDSDGSLLSDFGCNFP 258
           DGYGVP++ SEGRRLLI+ANARELA    S L     SGD       +   L+D     P
Sbjct: 185 DGYGVPRDVSEGRRLLIQANARELACSLRSYLSLK--SGD-------ENETLTDLSV-VP 244

Query: 259 APEAHPANQFLRDWFASGRGCIAEGLRLCSNSGCGRPETRLHEFRRCSVCGNVNYCSRGC 318
             E HP N+FL++WF+SGR  +AEGLR+CS+ GCGRPETR HEFRRCSVCG VNYCSRGC
Sbjct: 245 VQEIHPVNRFLKEWFSSGRVDLAEGLRMCSHGGCGRPETRAHEFRRCSVCGKVNYCSRGC 304

Query: 319 QALDWKLRHKTECAPFDRWLIEDDDLEGDDDGGV 353
           QALDW+ +HK EC P D W+    ++ GDD   V
Sbjct: 305 QALDWRAKHKVECTPLDLWVAAAAEI-GDDGEAV 325

[Close]

BLAST of Clc03G04000 vs. TAIR 10
Match: AT2G24640.1 (ubiquitin-specific protease 19 )

HSP 1 Score: 46.2 bits (108), Expect = 6.5e-05
Identity = 23/59 (38.98%), Postives = 31/59 (52.54%), Query Frame = 0


Query: 290 SGCGRPETRLHEFRRCSVCGNVNYCSRGCQALDWKLRHKTECAPF---DRWLIEDDDLE 346
           S CG+  T     ++CS C +V YCS  CQ  DWK  HK +C  F   D   +  DD++
Sbjct: 65  SVCGKATT-----KKCSRCKSVRYCSAACQTSDWKSGHKLKCKGFRSTDSSPVRRDDID 118

[Close]

BLAST of Clc03G04000 vs. TAIR 10
Match: AT1G17110.1 (ubiquitin-specific protease 15 )

HSP 1 Score: 45.8 bits (107), Expect = 8.5e-05
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 304 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 336
           RCS C +V YCS  CQ + W++ HK EC P +
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

[Close]

BLAST of Clc03G04000 vs. TAIR 10
Match: AT1G17110.2 (ubiquitin-specific protease 15 )

HSP 1 Score: 45.8 bits (107), Expect = 8.5e-05
Identity = 16/32 (50.00%), Postives = 21/32 (65.62%), Query Frame = 0


Query: 304 RCSVCGNVNYCSRGCQALDWKLRHKTECAPFD 336
           RCS C +V YCS  CQ + W++ HK EC P +
Sbjct: 140 RCSRCKSVRYCSGKCQIIHWRVAHKDECVPVE 171

The following BLAST results are available for this feature:

BLAST of Clc03G04000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008439699.1	2.8e-191	95.17	PREDICTED: F-box protein At1g67340 [Cucumis melo] >KAA0055331.1 F-box protein [C...	[more]
XP_038894785.1	4.4e-189	94.32	F-box protein At1g67340 [Benincasa hispida]	[more]
KAG7019742.1	2.2e-188	93.75	F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_004154118.1	5.4e-187	93.77	F-box protein At1g67340 [Cucumis sativus] >KGN64409.1 hypothetical protein Csa_0...	[more]
XP_023001353.1	2.1e-186	93.18	F-box protein At1g67340-like [Cucurbita maxima]	[more]

BLAST of Clc03G04000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYF9	1.5e-123	63.69	F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1	[more]
Q9FK27	1.1e-113	60.78	F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1	[more]
Q2YDC9	4.9e-05	41.07	Programmed cell death protein 2 OS=Bos taurus OX=9913 GN=PDCD2 PE=2 SV=1	[more]
Q09415	3.2e-04	47.62	SET domain-containing protein 14 OS=Caenorhabditis elegans OX=6239 GN=set-14 PE=...	[more]
P46718	4.1e-04	37.31	Programmed cell death protein 2 OS=Mus musculus OX=10090 GN=Pdcd2 PE=2 SV=2	[more]

BLAST of Clc03G04000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UP50	1.3e-191	95.17	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004680...	[more]
A0A1S3AZD5	1.3e-191	95.17	F-box protein At1g67340 OS=Cucumis melo OX=3656 GN=LOC103484413 PE=4 SV=1	[more]
A0A0A0LTV0	2.6e-187	93.77	MYND-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050480 P...	[more]
A0A6J1KQ99	1.0e-186	93.18	F-box protein At1g67340-like OS=Cucurbita maxima OX=3661 GN=LOC111495512 PE=4 SV...	[more]
A0A6J1EA77	1.4e-185	92.90	F-box protein At5g50450-like OS=Cucurbita moschata OX=3662 GN=LOC111431294 PE=4 ...	[more]

BLAST of Clc03G04000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67340.1	1.1e-124	63.69	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT5G50450.1	7.7e-115	60.78	HCP-like superfamily protein with MYND-type zinc finger	[more]
AT2G24640.1	6.5e-05	38.98	ubiquitin-specific protease 19	[more]
AT1G17110.1	8.5e-05	50.00	ubiquitin-specific protease 15	[more]
AT1G17110.2	8.5e-05	50.00	ubiquitin-specific protease 15	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.2220		coord: 281..333 e-value: 5.2E-11 score: 44.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..367
None	No IPR available	PANTHER	PTHR46758:SF9	HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN	coord: 16..362
None	No IPR available	SUPERFAMILY	144232	HIT/MYND zinc finger-like	coord: 286..336
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 101..217
IPR002893	Zinc finger, MYND-type	PFAM	PF01753	zf-MYND	coord: 291..331 e-value: 3.1E-8 score: 33.6
IPR002893	Zinc finger, MYND-type	PROSITE	PS50865	ZF_MYND_2	coord: 289..331 score: 11.205131
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 87..241 e-value: 2.3E-15 score: 58.4
IPR044508	F-box protein At5g50450/At1g67340-like	PANTHER	PTHR46758	MYND DOMAIN-CONTAINING	coord: 16..362
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 33..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc03G04000.2	Clc03G04000.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding