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Clc03G03660 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAATACTTAGATCCCTCTTTTTGTACGAGTATTAAAAATGAATATTGACTCTTCCTGCTATTCCTCTTGTACCGACACGAGCTTGGGCATTATTATTCAAAATGCTAGTGGTTCTCTCGTGTTGGATGTTGTCAAATTTATGCCAATGTTTGTGGATGTTCTTTCCGCTGAAACTCTCTCAATGCTGGTCAATCCACATGAAGCTTAAAGGTAGGTCTCTCAAATATTTGGGTGGAATAGGATGCCTAGTTATTGATATCGACTATCCACAAAAACGACTTCAATCTTCTCCTCGAGGTGCTATCTTGGAGGATATTTAGACTTGGATGTTGATTGTATGAAATAAAAGATGTAGTCTTAGTCCTAGATCTACAAATTATGTTGCTCATAGTATTGTTGGGTGGCCTTGAGCTAATGAGATTGAGAATTTTTGGACGTCTAATCCTTCGATGTGGTTAATGTCATTTTTAATTTATGATGCTAATGATTTTAGACTTTATGCTATTTCGATTCTTTTAGCATTCTTTTTATATAAAAAAAAAAAGTATAAATTTGAATGTTATATTTAATAGAATCTCTTACTTCAATTTTATGCCTAATAGATTCGTGACATTTATAGCATTTGAAAGCTAGAAGATTAATTTTTTATTTTTATTTTCATAATTTATAGACAAAATCGATACAAACTTCAAAGTCTAGGAACTAGATACATAATTTAATAAAAAATAATAAATTATATATAGTTGAAAATACTTTTAATCTATTGAGTTTTCATAAAAACAACAATTTAATTCTTCTTTTTAAAGGCTAAACAATTTTATTTTTAAACTTCTTTTGCTTATAAACAAATGTGATCAAAATTAATTGTTAATTTTTATAAGAATTATTCTTAGTAGAAGAAAATGAATAAAAAATATTTATAAATATAACAACACATGTGTAAATTTAACAGTATGCATTACCCACGTTATTTCGGGTGTTCTCAACTGTCTCTCTCTTAAGAAATTCTGTGTTTCTTCTTGCAAAGTTTACCTTTTCCATCCTGTTTTGCTCGCACTCTCTTTTTGTTTCTTTCCGTTTTTGGTCTTCTCCTATCCGATCCCCGGCCCTTTCGTCCTGCATTCATGGCATCGGTAAGATTTCTCCACCATTTCTTTACTCTTTCTTTTCTTACATCTTCTGCTTTTATTTACTTGGAGAAGCTGAACTGTTCGCGCTATAATTTCCCTAATCAAAATGCGATTCTGTACACTTGAATGATCAGAATGGGTTGTAGATTAGGGTTTATGATCGTAGTCCTAGAATTGGGTTATTGACACAAGTTAATATTGCTTAATCAATGATGGCGATATCAACTGAGATGAAGAAGGGAGATTTTGGTTCCTTTGGAGCTAACATTGCTCCACACAATGCGATAAATAATCGCCATGGTTATCTGTGGTTGCTTTTCTCCTTAATTCTATTTCGCTTGACGTGTTGGAGAACAAAATTCCGTTTGTACTTTTAACAAGCTATGAGCAGGGAGGTATAAGAATCTATGAGATGAAAATATAGAACGTTTCACTGTTGTTTTTTCTGAAGTGTCATCTCGCTTGATAAAATTTTCAGTCGTGGTAGTCTGATTAGGGAGGAGTTAGCTTGGGTATGTAGGGAATCATATTCATAGCCACCATTCTTGCAATGAAATGTTAGCGTATTACAACATTCCAAAACATAGAATACTTTGGTTGTAGACTGGACCAATGGCAACATTTATAGCTCTAGTTCAAGAAGACCATGGGGAGGTTTTTTTGAATAGTGAAGAGGAATAGGAGAGTTTTTAGAACTGACGAACTGTCTTGGAAGGGTTTTGTCTTTAGCTATGTTTAATGCCGCTCTACAGTCTGTCTGTGGCGTTTTGTAATTATTATTTAGCCCTTAATTCTATCTATTGAACCCTTTCTTTGGTAGCTATAGTATATGTTTTTGTTTAAGATCCCAGCTTGTTGCCAAAGTGGGCATAGGTCACTTAGCATATAAATGTGTTAGTGACCAAGAGGTTGTGGTTCGAATCCCCCCACCACTATACTATTGTACTCGAAACATATTGGGCTTGTCCTTTTATAAGCTTGCTTGTATTCCATTTTTCTACAATGAAAGTTTGGTTTTCATCAGAAGACCATGTAGGATATTGGAAAATACTGATGTAGATAAGGGAGATTGGCTGTATTGCTAATTTGCAGATTAAAGAGTGATAAAAGCCCTTTTATCCATCCATGTGCCATACCTGACTTGATTCCTCCGCTTCCTTTTGTCCATCCTTCCATCTGCAAGTAGAAAAGTTACTGTATGCTATATAGAGTTCAAATGTTGTTAATAAGTAATTGCGGCTTTTCCTTTATCTGAAGGCTTATACATGCAGAGATCAGTTTTAACATTTTTGTAAGCTGTTAGTAGGATACTCAATAATGAAAGTTTCATGTAGATATCATTTGTGTTGTTACAGCAGGACAGGGGTCGTCCATTGCCAAAGTTTGGCGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGAGAAGAAGATCACTGGAACTGCTGCCAATAAGGTTCCTCAACAAAGAAATGAACCTGTCTTCAACAATGAAAGTTACCCTCAGTATCCTCCACCGAAGGTCTGTTTAATAGAAGACGAGAGAACCAATTTGTTCTAGATATCTTAGATCTAATCTATTTTTTGGTATTTGGATGCAGAAAAGGTGGTTTTGCTGTGGTTGAAGCCTCAGTGGCTTCAAGATCTTGAATTTGTGCAACATCTTAAAGCCCGTAAAATTTTGCAGCCTTGTCCAACCGCGGGCCTCTATCTGAGTCCCAACAACACCAACAAATGA ATGTTAATACTTAGATCCCTCTTTTTTCGTGGTAGTCTGATTAGGGAGGAGTTAGCTTGGAATACTTTGGTTGTAGACTGGACCAATGGCAACATTTATAGCTCTAGTTCAAGAAGACCATGGGGAGCTATGTTTAATGCCGCTCTACAGTCTGTCTGTGGCGTTTTATTAAAGAGTGATAAAAGCCCTTTTATCCATCCATGTGCCATACCTGACTTGATTCCTCCGCTTCCTTTTCAGGACAGGGGTCGTCCATTGCCAAAGTTTGGCGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGAGAAGAAGATCACTGGAACTGCTGCCAATAAGGTTCCTCAACAAAGAAATGAACCTGTCTTCAACAATGAAAGTTACCCTCAGTATCCTCCACCGAAGGTGGTTTTGCTGTGGTTGAAGCCTCAGTGGCTTCAAGATCTTGAATTTGTGCAACATCTTAAAGCCCGTAAAATTTTGCAGCCTTGTCCAACCGCGGGCCTCTATCTGAGTCCCAACAACACCAACAAATGA ATGTTAATACTTAGATCCCTCTTTTTTCGTGGTAGTCTGATTAGGGAGGAGTTAGCTTGGAATACTTTGGTTGTAGACTGGACCAATGGCAACATTTATAGCTCTAGTTCAAGAAGACCATGGGGAGCTATGTTTAATGCCGCTCTACAGTCTGTCTGTGGCGTTTTATTAAAGAGTGATAAAAGCCCTTTTATCCATCCATGTGCCATACCTGACTTGATTCCTCCGCTTCCTTTTCAGGACAGGGGTCGTCCATTGCCAAAGTTTGGCGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGAGAAGAAGATCACTGGAACTGCTGCCAATAAGGTTCCTCAACAAAGAAATGAACCTGTCTTCAACAATGAAAGTTACCCTCAGTATCCTCCACCGAAGGTGGTTTTGCTGTGGTTGAAGCCTCAGTGGCTTCAAGATCTTGAATTTGTGCAACATCTTAAAGCCCGTAAAATTTTGCAGCCTTGTCCAACCGCGGGCCTCTATCTGAGTCCCAACAACACCAACAAATGA MLILRSLFFRGSLIREELAWNTLVVDWTNGNIYSSSSRRPWGAMFNAALQSVCGVLLKSDKSPFIHPCAIPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRNEPVFNNESYPQYPPPKVVLLWLKPQWLQDLEFVQHLKARKILQPCPTAGLYLSPNNTNK Homology
BLAST of Clc03G03660 vs. NCBI nr
Match: KAE8652616.1 (hypothetical protein Csa_013594 [Cucumis sativus]) HSP 1 Score: 141.4 bits (355), Expect = 8.2e-30 Identity = 74/125 (59.20%), Postives = 79/125 (63.20%), Query Frame = 0
BLAST of Clc03G03660 vs. NCBI nr
Match: XP_004152507.2 (protein NOI4 [Cucumis sativus]) HSP 1 Score: 135.6 bits (340), Expect = 4.5e-28 Identity = 70/95 (73.68%), Postives = 75/95 (78.95%), Query Frame = 0
BLAST of Clc03G03660 vs. NCBI nr
Match: XP_038894677.1 (protein NOI4 isoform X2 [Benincasa hispida]) HSP 1 Score: 135.2 bits (339), Expect = 5.9e-28 Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 0
BLAST of Clc03G03660 vs. NCBI nr
Match: XP_038894676.1 (protein NOI4 isoform X1 [Benincasa hispida]) HSP 1 Score: 135.2 bits (339), Expect = 5.9e-28 Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 0
BLAST of Clc03G03660 vs. NCBI nr
Match: XP_008439256.1 (PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo]) HSP 1 Score: 134.4 bits (337), Expect = 1.0e-27 Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of Clc03G03660 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.2e-12 Identity = 39/65 (60.00%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of Clc03G03660 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.1e-05 Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 0
BLAST of Clc03G03660 vs. ExPASy TrEMBL
Match: A0A0A0LRE5 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050070 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 2.2e-28 Identity = 70/95 (73.68%), Postives = 75/95 (78.95%), Query Frame = 0
BLAST of Clc03G03660 vs. ExPASy TrEMBL
Match: A0A1S3AZ04 (RPM1-interacting protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484092 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 4.9e-28 Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = 0
BLAST of Clc03G03660 vs. ExPASy TrEMBL
Match: A0A5A7UL43 (RPM1-interacting protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001400 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27 Identity = 71/123 (57.72%), Postives = 77/123 (62.60%), Query Frame = 0
BLAST of Clc03G03660 vs. ExPASy TrEMBL
Match: A0A1S3AYE6 (RPM1-interacting protein 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484092 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27 Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0
BLAST of Clc03G03660 vs. ExPASy TrEMBL
Match: A0A5D3BKG8 (RPM1-interacting protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004320 PE=4 SV=1) HSP 1 Score: 130.6 bits (327), Expect = 7.0e-27 Identity = 70/123 (56.91%), Postives = 76/123 (61.79%), Query Frame = 0
BLAST of Clc03G03660 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 78.6 bits (192), Expect = 6.1e-15 Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = 0
BLAST of Clc03G03660 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 78.6 bits (192), Expect = 6.1e-15 Identity = 41/76 (53.95%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of Clc03G03660 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 75.1 bits (183), Expect = 6.7e-14 Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of Clc03G03660 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 75.1 bits (183), Expect = 6.7e-14 Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0
BLAST of Clc03G03660 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein ) HSP 1 Score: 72.4 bits (176), Expect = 4.4e-13 Identity = 38/71 (53.52%), Postives = 47/71 (66.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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