Clc03G03660 (gene) Watermelon (cordophanus) v2

Overview
NameClc03G03660
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionRPM1-interacting protein 4-like
LocationClcChr03: 3686468 .. 3689370 (-)
RNA-Seq ExpressionClc03G03660
SyntenyClc03G03660
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAATACTTAGATCCCTCTTTTTGTACGAGTATTAAAAATGAATATTGACTCTTCCTGCTATTCCTCTTGTACCGACACGAGCTTGGGCATTATTATTCAAAATGCTAGTGGTTCTCTCGTGTTGGATGTTGTCAAATTTATGCCAATGTTTGTGGATGTTCTTTCCGCTGAAACTCTCTCAATGCTGGTCAATCCACATGAAGCTTAAAGGTAGGTCTCTCAAATATTTGGGTGGAATAGGATGCCTAGTTATTGATATCGACTATCCACAAAAACGACTTCAATCTTCTCCTCGAGGTGCTATCTTGGAGGATATTTAGACTTGGATGTTGATTGTATGAAATAAAAGATGTAGTCTTAGTCCTAGATCTACAAATTATGTTGCTCATAGTATTGTTGGGTGGCCTTGAGCTAATGAGATTGAGAATTTTTGGACGTCTAATCCTTCGATGTGGTTAATGTCATTTTTAATTTATGATGCTAATGATTTTAGACTTTATGCTATTTCGATTCTTTTAGCATTCTTTTTATATAAAAAAAAAAAGTATAAATTTGAATGTTATATTTAATAGAATCTCTTACTTCAATTTTATGCCTAATAGATTCGTGACATTTATAGCATTTGAAAGCTAGAAGATTAATTTTTTATTTTTATTTTCATAATTTATAGACAAAATCGATACAAACTTCAAAGTCTAGGAACTAGATACATAATTTAATAAAAAATAATAAATTATATATAGTTGAAAATACTTTTAATCTATTGAGTTTTCATAAAAACAACAATTTAATTCTTCTTTTTAAAGGCTAAACAATTTTATTTTTAAACTTCTTTTGCTTATAAACAAATGTGATCAAAATTAATTGTTAATTTTTATAAGAATTATTCTTAGTAGAAGAAAATGAATAAAAAATATTTATAAATATAACAACACATGTGTAAATTTAACAGTATGCATTACCCACGTTATTTCGGGTGTTCTCAACTGTCTCTCTCTTAAGAAATTCTGTGTTTCTTCTTGCAAAGTTTACCTTTTCCATCCTGTTTTGCTCGCACTCTCTTTTTGTTTCTTTCCGTTTTTGGTCTTCTCCTATCCGATCCCCGGCCCTTTCGTCCTGCATTCATGGCATCGGTAAGATTTCTCCACCATTTCTTTACTCTTTCTTTTCTTACATCTTCTGCTTTTATTTACTTGGAGAAGCTGAACTGTTCGCGCTATAATTTCCCTAATCAAAATGCGATTCTGTACACTTGAATGATCAGAATGGGTTGTAGATTAGGGTTTATGATCGTAGTCCTAGAATTGGGTTATTGACACAAGTTAATATTGCTTAATCAATGATGGCGATATCAACTGAGATGAAGAAGGGAGATTTTGGTTCCTTTGGAGCTAACATTGCTCCACACAATGCGATAAATAATCGCCATGGTTATCTGTGGTTGCTTTTCTCCTTAATTCTATTTCGCTTGACGTGTTGGAGAACAAAATTCCGTTTGTACTTTTAACAAGCTATGAGCAGGGAGGTATAAGAATCTATGAGATGAAAATATAGAACGTTTCACTGTTGTTTTTTCTGAAGTGTCATCTCGCTTGATAAAATTTTCAGTCGTGGTAGTCTGATTAGGGAGGAGTTAGCTTGGGTATGTAGGGAATCATATTCATAGCCACCATTCTTGCAATGAAATGTTAGCGTATTACAACATTCCAAAACATAGAATACTTTGGTTGTAGACTGGACCAATGGCAACATTTATAGCTCTAGTTCAAGAAGACCATGGGGAGGTTTTTTTGAATAGTGAAGAGGAATAGGAGAGTTTTTAGAACTGACGAACTGTCTTGGAAGGGTTTTGTCTTTAGCTATGTTTAATGCCGCTCTACAGTCTGTCTGTGGCGTTTTGTAATTATTATTTAGCCCTTAATTCTATCTATTGAACCCTTTCTTTGGTAGCTATAGTATATGTTTTTGTTTAAGATCCCAGCTTGTTGCCAAAGTGGGCATAGGTCACTTAGCATATAAATGTGTTAGTGACCAAGAGGTTGTGGTTCGAATCCCCCCACCACTATACTATTGTACTCGAAACATATTGGGCTTGTCCTTTTATAAGCTTGCTTGTATTCCATTTTTCTACAATGAAAGTTTGGTTTTCATCAGAAGACCATGTAGGATATTGGAAAATACTGATGTAGATAAGGGAGATTGGCTGTATTGCTAATTTGCAGATTAAAGAGTGATAAAAGCCCTTTTATCCATCCATGTGCCATACCTGACTTGATTCCTCCGCTTCCTTTTGTCCATCCTTCCATCTGCAAGTAGAAAAGTTACTGTATGCTATATAGAGTTCAAATGTTGTTAATAAGTAATTGCGGCTTTTCCTTTATCTGAAGGCTTATACATGCAGAGATCAGTTTTAACATTTTTGTAAGCTGTTAGTAGGATACTCAATAATGAAAGTTTCATGTAGATATCATTTGTGTTGTTACAGCAGGACAGGGGTCGTCCATTGCCAAAGTTTGGCGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGAGAAGAAGATCACTGGAACTGCTGCCAATAAGGTTCCTCAACAAAGAAATGAACCTGTCTTCAACAATGAAAGTTACCCTCAGTATCCTCCACCGAAGGTCTGTTTAATAGAAGACGAGAGAACCAATTTGTTCTAGATATCTTAGATCTAATCTATTTTTTGGTATTTGGATGCAGAAAAGGTGGTTTTGCTGTGGTTGAAGCCTCAGTGGCTTCAAGATCTTGAATTTGTGCAACATCTTAAAGCCCGTAAAATTTTGCAGCCTTGTCCAACCGCGGGCCTCTATCTGAGTCCCAACAACACCAACAAATGA

mRNA sequence

ATGTTAATACTTAGATCCCTCTTTTTTCGTGGTAGTCTGATTAGGGAGGAGTTAGCTTGGAATACTTTGGTTGTAGACTGGACCAATGGCAACATTTATAGCTCTAGTTCAAGAAGACCATGGGGAGCTATGTTTAATGCCGCTCTACAGTCTGTCTGTGGCGTTTTATTAAAGAGTGATAAAAGCCCTTTTATCCATCCATGTGCCATACCTGACTTGATTCCTCCGCTTCCTTTTCAGGACAGGGGTCGTCCATTGCCAAAGTTTGGCGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGAGAAGAAGATCACTGGAACTGCTGCCAATAAGGTTCCTCAACAAAGAAATGAACCTGTCTTCAACAATGAAAGTTACCCTCAGTATCCTCCACCGAAGGTGGTTTTGCTGTGGTTGAAGCCTCAGTGGCTTCAAGATCTTGAATTTGTGCAACATCTTAAAGCCCGTAAAATTTTGCAGCCTTGTCCAACCGCGGGCCTCTATCTGAGTCCCAACAACACCAACAAATGA

Coding sequence (CDS)

ATGTTAATACTTAGATCCCTCTTTTTTCGTGGTAGTCTGATTAGGGAGGAGTTAGCTTGGAATACTTTGGTTGTAGACTGGACCAATGGCAACATTTATAGCTCTAGTTCAAGAAGACCATGGGGAGCTATGTTTAATGCCGCTCTACAGTCTGTCTGTGGCGTTTTATTAAAGAGTGATAAAAGCCCTTTTATCCATCCATGTGCCATACCTGACTTGATTCCTCCGCTTCCTTTTCAGGACAGGGGTCGTCCATTGCCAAAGTTTGGCGAATGGGATGTAAATAATCCTGCATCTGCAGAAGGATTTACAGTCATATTTAACAAGGCTAGAAATGAGAAGAAGATCACTGGAACTGCTGCCAATAAGGTTCCTCAACAAAGAAATGAACCTGTCTTCAACAATGAAAGTTACCCTCAGTATCCTCCACCGAAGGTGGTTTTGCTGTGGTTGAAGCCTCAGTGGCTTCAAGATCTTGAATTTGTGCAACATCTTAAAGCCCGTAAAATTTTGCAGCCTTGTCCAACCGCGGGCCTCTATCTGAGTCCCAACAACACCAACAAATGA

Protein sequence

MLILRSLFFRGSLIREELAWNTLVVDWTNGNIYSSSSRRPWGAMFNAALQSVCGVLLKSDKSPFIHPCAIPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRNEPVFNNESYPQYPPPKVVLLWLKPQWLQDLEFVQHLKARKILQPCPTAGLYLSPNNTNK
Homology
[Close]
BLAST of Clc03G03660 vs. NCBI nr
Match: KAE8652616.1 (hypothetical protein Csa_013594 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 8.2e-30
Identity = 74/125 (59.20%), Postives = 79/125 (63.20%), Query Frame = 0 

Query: 21  NTLVVDWTNGNIYSSSSRRPWGAMFNAALQSVCGVLLKSDKSPFIHPCAIPDLIPPLPFQ 80
           NTL V WTNGNIYSSS +   G                                     +
Sbjct: 7   NTLGVGWTNGNIYSSSIQEDNG-------------------------------------E 66

Query: 81  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRNEPVFNNESYPQ 140
           D+GR LPKFG+WDVNNPASAEGFTVIFNKARNEKK TGTAAN VPQ+RNEPVFNNESYPQ
Sbjct: 67  DKGRALPKFGDWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPQERNEPVFNNESYPQ 94

Query: 141 YPPPK 146
           YPPPK
Sbjct: 127 YPPPK 94

[Close]
BLAST of Clc03G03660 vs. NCBI nr
Match: XP_004152507.2 (protein NOI4 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 4.5e-28
Identity = 70/95 (73.68%), Postives = 75/95 (78.95%), Query Frame = 0 

Query: 51  SVCGVLLKSDKSPFIHPCAIPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKA 110
           SV G+LL SD  PF  P  +         QD+GR LPKFG+WDVNNPASAEGFTVIFNKA
Sbjct: 42  SVFGLLL-SDPRPF-RPAIMAS-------QDKGRALPKFGDWDVNNPASAEGFTVIFNKA 101

Query: 111 RNEKKITGTAANKVPQQRNEPVFNNESYPQYPPPK 146
           RNEKK TGTAAN VPQ+RNEPVFNNESYPQYPPPK
Sbjct: 102 RNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPK 127

[Close]
BLAST of Clc03G03660 vs. NCBI nr
Match: XP_038894677.1 (protein NOI4 isoform X2 [Benincasa hispida])

HSP 1 Score: 135.2 bits (339), Expect = 5.9e-28
Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 80  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRNEPVFNNESYP 139
           QD+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKK TGTAANKVPQQ +EPVFNNESYP
Sbjct: 4   QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQISEPVFNNESYP 63

Query: 140 QYPPPK 146
           QYPPPK
Sbjct: 64  QYPPPK 69

[Close]
BLAST of Clc03G03660 vs. NCBI nr
Match: XP_038894676.1 (protein NOI4 isoform X1 [Benincasa hispida])

HSP 1 Score: 135.2 bits (339), Expect = 5.9e-28
Identity = 62/66 (93.94%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 80  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRNEPVFNNESYP 139
           QD+GRPLPKFGEWDVNNPASAEGFTVIFNKARNEKK TGTAANKVPQQ +EPVFNNESYP
Sbjct: 4   QDKGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANKVPQQISEPVFNNESYP 63

Query: 140 QYPPPK 146
           QYPPPK
Sbjct: 64  QYPPPK 69

[Close]
BLAST of Clc03G03660 vs. NCBI nr
Match: XP_008439256.1 (PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo])

HSP 1 Score: 134.4 bits (337), Expect = 1.0e-27
Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 80  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRNEPVFNNESYP 139
           QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKK TG AAN VP++RNEPVFNNESYP
Sbjct: 4   QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGNAANMVPKERNEPVFNNESYP 63

Query: 140 QYPPPK 146
           QYPPPK
Sbjct: 64  QYPPPK 69

[Close]
BLAST of Clc03G03660 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-12
Identity = 39/65 (60.00%), Postives = 44/65 (67.69%), Query Frame = 0 

Query: 81  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRNEPVFNNESYPQ 140
           D+GRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKK TG       +     V +    P 
Sbjct: 3   DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKK-TGGKPGSPGKSSEGHVKSGGGDPS 62

Query: 141 YPPPK 146
            P PK
Sbjct: 63  KPQPK 66

[Close]
BLAST of Clc03G03660 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-05
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 0 

Query: 86  LPKFGEWDVNNPASAEGFTVIFNKARNEK----KITGTAANKVPQQRNEPVFNNES 138
           +PKFG+WD NNP+SA+G+T IFNK R E+     ++G++     Q    P  NN S
Sbjct: 148 VPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRNP--NNTS 201

[Close]
BLAST of Clc03G03660 vs. ExPASy TrEMBL
Match: A0A0A0LRE5 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G050070 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.2e-28
Identity = 70/95 (73.68%), Postives = 75/95 (78.95%), Query Frame = 0 

Query: 51  SVCGVLLKSDKSPFIHPCAIPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKA 110
           SV G+LL SD  PF  P  +         QD+GR LPKFG+WDVNNPASAEGFTVIFNKA
Sbjct: 42  SVFGLLL-SDPRPF-RPAIMAS-------QDKGRALPKFGDWDVNNPASAEGFTVIFNKA 101

Query: 111 RNEKKITGTAANKVPQQRNEPVFNNESYPQYPPPK 146
           RNEKK TGTAAN VPQ+RNEPVFNNESYPQYPPPK
Sbjct: 102 RNEKKTTGTAANMVPQERNEPVFNNESYPQYPPPK 127

[Close]
BLAST of Clc03G03660 vs. ExPASy TrEMBL
Match: A0A1S3AZ04 (RPM1-interacting protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484092 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 4.9e-28
Identity = 61/66 (92.42%), Postives = 63/66 (95.45%), Query Frame = 0 

Query: 80  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRNEPVFNNESYP 139
           QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKK TG AAN VP++RNEPVFNNESYP
Sbjct: 4   QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGNAANMVPKERNEPVFNNESYP 63

Query: 140 QYPPPK 146
           QYPPPK
Sbjct: 64  QYPPPK 69

[Close]
BLAST of Clc03G03660 vs. ExPASy TrEMBL
Match: A0A5A7UL43 (RPM1-interacting protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G001400 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27
Identity = 71/123 (57.72%), Postives = 77/123 (62.60%), Query Frame = 0 

Query: 18  LAWNTLVVDWTNGNIYSSSSRRPWGAMFNAALQSVCGVLLKSDKSPFIHPCAIPDLIPPL 77
           +A +TL VDWT GNIYSSS +   G                                   
Sbjct: 1   MASDTLGVDWTRGNIYSSSIQEDNG----------------------------------- 60

Query: 78  PFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRNEPVFNNES 137
             +DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKK TGTAAN VP++RNEPVFNNES
Sbjct: 61  --EDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGTAANMVPKERNEPVFNNES 86

Query: 138 YPQ 141
           YPQ
Sbjct: 121 YPQ 86

[Close]
BLAST of Clc03G03660 vs. ExPASy TrEMBL
Match: A0A1S3AYE6 (RPM1-interacting protein 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484092 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27
Identity = 60/65 (92.31%), Postives = 62/65 (95.38%), Query Frame = 0 

Query: 81  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRNEPVFNNESYPQ 140
           DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKK TG AAN VP++RNEPVFNNESYPQ
Sbjct: 4   DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGNAANMVPKERNEPVFNNESYPQ 63

Query: 141 YPPPK 146
           YPPPK
Sbjct: 64  YPPPK 68

[Close]
BLAST of Clc03G03660 vs. ExPASy TrEMBL
Match: A0A5D3BKG8 (RPM1-interacting protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004320 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 7.0e-27
Identity = 70/123 (56.91%), Postives = 76/123 (61.79%), Query Frame = 0 

Query: 18  LAWNTLVVDWTNGNIYSSSSRRPWGAMFNAALQSVCGVLLKSDKSPFIHPCAIPDLIPPL 77
           +A +TL VDWT GNIYSSS +   G                                   
Sbjct: 1   MASDTLGVDWTRGNIYSSSIQEDNG----------------------------------- 60

Query: 78  PFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRNEPVFNNES 137
             +DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKK TG AAN VP++RNEPVFNNES
Sbjct: 61  --EDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKTTGNAANMVPKERNEPVFNNES 86

Query: 138 YPQ 141
           YPQ
Sbjct: 121 YPQ 86

[Close]
BLAST of Clc03G03660 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 78.6 bits (192), Expect = 6.1e-15
Identity = 35/49 (71.43%), Postives = 42/49 (85.71%), Query Frame = 0 

Query: 70  IPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITG 119
           + D + P  ++D+GRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKK  G
Sbjct: 8   LDDYMFPFDWRDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 56

[Close]
BLAST of Clc03G03660 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 78.6 bits (192), Expect = 6.1e-15
Identity = 41/76 (53.95%), Postives = 50/76 (65.79%), Query Frame = 0 

Query: 70  IPDLIPPLPFQDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRN 129
           + D + P  ++D+GRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKK TG       +   
Sbjct: 8   LDDYMFPFDWRDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKK-TGGKPGSPGKSSE 67

Query: 130 EPVFNNESYPQYPPPK 146
             V +    P  P PK
Sbjct: 68  GHVKSGGGDPSKPQPK 82

[Close]
BLAST of Clc03G03660 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 75.1 bits (183), Expect = 6.7e-14
Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 0 

Query: 81  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITGTAANKVPQQRNEPVFNNESYPQ 140
           D+GRPLPKFGEWDVN+P+SAEGFTVIFNKARNEKK  G + +     ++EP +N      
Sbjct: 3   DKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDS---PGKDEPGYNKNGEVL 62

Query: 141 YPPPK 146
             P K
Sbjct: 63  EKPAK 64

[Close]
BLAST of Clc03G03660 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 75.1 bits (183), Expect = 6.7e-14
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0 

Query: 81  DRGRPLPKFGEWDVNNPASAEGFTVIFNKARNEKKITG 119
           D+GRPLPKFGEWDVN+PASAEGFTVIFNKAR+EKK  G
Sbjct: 3   DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGG 40

[Close]
BLAST of Clc03G03660 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 72.4 bits (176), Expect = 4.4e-13
Identity = 38/71 (53.52%), Postives = 47/71 (66.20%), Query Frame = 0 

Query: 80  QDRGRPLPKFGEWDVNNPASAEGFTVIFNKARNE---KKITGTAANKV--PQQRNEPVFN 139
           +++G+PLPKFGEWDVNNPASAEGFTVIF+KA +E   KK +G   N +  PQ+      N
Sbjct: 3   ENKGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQN 62

Query: 140 NESYPQYPPPK 146
           N    Q P  K
Sbjct: 63  NNHSSQNPKAK 73

The following BLAST results are available for this feature:
BLAST of Clc03G03660 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8652616.18.2e-3059.20hypothetical protein Csa_013594 [Cucumis sativus][more]
XP_004152507.24.5e-2873.68protein NOI4 [Cucumis sativus][more]
XP_038894677.15.9e-2893.94protein NOI4 isoform X2 [Benincasa hispida][more]
XP_038894676.15.9e-2893.94protein NOI4 isoform X1 [Benincasa hispida][more]
XP_008439256.11.0e-2792.42PREDICTED: RPM1-interacting protein 4 isoform X1 [Cucumis melo][more]
BLAST of Clc03G03660 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O226331.2e-1260.00Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1[more]
Q8GYN51.1e-0544.64RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1[more]
BLAST of Clc03G03660 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRE52.2e-2873.68AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G05... [more]
A0A1S3AZ044.9e-2892.42RPM1-interacting protein 4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484092 PE... [more]
A0A5A7UL431.8e-2757.72RPM1-interacting protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A1S3AYE61.8e-2792.31RPM1-interacting protein 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484092 PE... [more]
A0A5D3BKG87.0e-2756.91RPM1-interacting protein 4 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
BLAST of Clc03G03660 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G55850.26.1e-1571.43RPM1-interacting protein 4 (RIN4) family protein [more]
AT5G55850.36.1e-1553.95RPM1-interacting protein 4 (RIN4) family protein [more]
AT2G04410.16.7e-1458.46RPM1-interacting protein 4 (RIN4) family protein [more]
AT5G55850.16.7e-1486.84RPM1-interacting protein 4 (RIN4) family protein [more]
AT5G63270.14.4e-1353.52RPM1-interacting protein 4 (RIN4) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008700RIN4, pathogenic type III effector avirulence factor Avr cleavage sitePFAMPF05627AvrRpt-cleavagecoord: 81..115
e-value: 2.2E-22
score: 78.1
NoneNo IPR availablePANTHERPTHR33159:SF69RPM1-INTERACTING PROTEIN 4-LIKEcoord: 80..142
IPR040387RPM1-interacting protein 4/NOI4PANTHERPTHR33159RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEINcoord: 80..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc03G03660.2Clc03G03660.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005886 plasma membrane